View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14818_low_11 (Length: 236)
Name: NF14818_low_11
Description: NF14818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14818_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 33540575 - 33540355
Alignment:
| Q |
1 |
ttacgactttaatttaaattttggatgtacttttaaaatttggatcgaatttaagttcaatctcacaaaaccgatttatatggcgaagacggcctccgtt |
100 |
Q |
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| T |
33540575 |
ttacgactttaatttaaattttggatgtacttttaaaatttggatcgaatttaagttcaatctcacaaaaccgatttatatggcgaagacggcctctgtt |
33540476 |
T |
|
| Q |
101 |
tataaacatatattttggtcattttttatccaatgttagacattttggagattgttctatataccaagagacaatctaaatatatgtttataaggagggc |
200 |
Q |
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||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |
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| T |
33540475 |
tataaacatatattttgattatttcttatccaatgttagacattttggagattgttctatataccaagagacgatttaaatatatgtttataaggagggc |
33540376 |
T |
|
| Q |
201 |
tgttttttggggagtgtaaag |
221 |
Q |
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||||||||||||||| |||| |
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| T |
33540375 |
cgttttttggggagtgcaaag |
33540355 |
T |
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