View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14818_low_5 (Length: 396)
Name: NF14818_low_5
Description: NF14818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14818_low_5 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
| [»] scaffold0264 (1 HSPs) |
| | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 338; Significance: 0; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 41 - 386
Target Start/End: Complemental strand, 22210029 - 22209684
Alignment:
| Q |
41 |
agttatactaattgatactagaaaacatagtttgttgacaacaattttacaactaaaataaaatttaataaactatcgaggaataaaagtacttgccgac |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22210029 |
agttatactaattgatactagaaaacatagtttgttgacaacaattttacaactaaaataaaatttaataaactatcgaggaataaaagtacttgccgac |
22209930 |
T |
|
| Q |
141 |
atttgattgtttgaaaattgtgcagaactattggcagattgagtagaatttgattctagtgcaagaacgtccgaatatgttctaccatgcaagaaaaacg |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22209929 |
atttgattgtttgaaaattgtgcagaactattggcagattgagtagaacttgattctagtgcaagaacgtccgaataagttctaccatgcaagaaaaacg |
22209830 |
T |
|
| Q |
241 |
caggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatccgggtcattttgaacacataa |
340 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22209829 |
caggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatccgggtcattttgaacacataa |
22209730 |
T |
|
| Q |
341 |
tagaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22209729 |
tagaccaatctgaatgtacttaattacttcatttgtagaataatct |
22209684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 41 - 386
Target Start/End: Original strand, 18994796 - 18995141
Alignment:
| Q |
41 |
agttatactaattgatactagaaaacatagtttgttgacaacaattttacaactaaaataaaatttaataaactatcgaggaataaaagtacttgccgac |
140 |
Q |
| |
|
||||||| | ||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
18994796 |
agttatatttattaatactagaaaacatagtttgttgacaacaattatacaactattataaaaattaataaactatcgaggaataaaagtacttgcagac |
18994895 |
T |
|
| Q |
141 |
atttgattgtttgaaaattgtgcagaactattggcagattgagtagaatttgattctagtgcaagaacgtccgaatatgttctaccatgcaagaaaaacg |
240 |
Q |
| |
|
||||||||| |||| ||| || |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
18994896 |
atttgattgattgagaatagtacagaactattggcagattgagtagaacttgattctagtgcaagaacgtcggaataagttctaccatgcaagaaaaacg |
18994995 |
T |
|
| Q |
241 |
caggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatccgggtcattttgaacacataa |
340 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18994996 |
caggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcacaattgaaggtctagcattcgggtcattttgaacacataa |
18995095 |
T |
|
| Q |
341 |
tagaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
||||||||||||||| | ||||| |||||||||| |||||||||| |
|
|
| T |
18995096 |
cagaccaatctgaatgcatttaatgacttcatttgcagaataatct |
18995141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 43 - 386
Target Start/End: Original strand, 20083153 - 20083495
Alignment:
| Q |
43 |
ttatactaattgatactagaaaacatagtttgttgacaacaattttacaactaaaataaaatttaataaactatcgaggaataaaagtacttgccgacat |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20083153 |
ttatactaattgatactagaaaacatagtttgttgacaacaattatagagctaaa-taaaatttaataaactatcgaggaataaaagtacttgccgacat |
20083251 |
T |
|
| Q |
143 |
ttgattgtttgaaaattgtgcagaactattggcagattgagtagaatttgattctagtgcaagaacgtccgaatatgttctaccatgcaagaaaaacgca |
242 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| ||||||||||||| |||||||| |||||||||| | ||||| |||||||||||||||||||||||| |
|
|
| T |
20083252 |
ttgattgtttgagaataatgcagaactattggtagattgagtagaacttgattcttgtgcaagaacatttgaataagttctaccatgcaagaaaaacgca |
20083351 |
T |
|
| Q |
243 |
ggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatccgggtcattttgaacacataata |
342 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | || |||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
20083352 |
ggttctggtggagttggtaattcaactgcataactgctaagataagaagcaactgtcacgatcgaaggtctggcatccgggtcatgttgaacacataata |
20083451 |
T |
|
| Q |
343 |
gaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
20083452 |
gaccaatctgaatgcacttaatgacttcatttgtagaataatct |
20083495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 91 - 386
Target Start/End: Original strand, 20235171 - 20235466
Alignment:
| Q |
91 |
aactaaaataaaatttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaattgtgcagaactattggcagattgagtagaatt |
190 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||| | |
|
|
| T |
20235171 |
aactaatataaaatttaataaactatagaggaataaaagtacttgcggacatttgattgtttgagaatagtgcagagctattggcagattgagtagaact |
20235270 |
T |
|
| Q |
191 |
tgattctagtgcaagaacgtccgaatatgttctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaa |
290 |
Q |
| |
|
||||||| ||||||||| || |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
20235271 |
tgattcttgtgcaagaatgtttgaattctttctaccatgcaagaaaaacgcaggttctttcggagttggtaattcaactgcataactgctaaggtaagaa |
20235370 |
T |
|
| Q |
291 |
gcaactgtcgcaattgaaggtctagcatccgggtcattttgaacacataatagaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
20235371 |
gaaactgtcgagattgaaggtctagcatccgggtcatgttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatct |
20235466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 91 - 386
Target Start/End: Original strand, 22129155 - 22129450
Alignment:
| Q |
91 |
aactaaaataaaatttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaattgtgcagaactattggcagattgagtagaatt |
190 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||| | |
|
|
| T |
22129155 |
aactaatataaaatttaataaactatagaggaataaaagtacttgcggacatttgattgtttgagaatagtgcagagctattggcagattgagtagaact |
22129254 |
T |
|
| Q |
191 |
tgattctagtgcaagaacgtccgaatatgttctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaa |
290 |
Q |
| |
|
||||||| ||||||||| || |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
22129255 |
tgattcttgtgcaagaatgtttgaattctttctaccatgcaagaaaaacgcaggttctttcggagttggtaattcaactgcataactgctaaggtaagaa |
22129354 |
T |
|
| Q |
291 |
gcaactgtcgcaattgaaggtctagcatccgggtcattttgaacacataatagaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
22129355 |
gaaactgtcgagattgaaggtctagcatccgggtcatgttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatct |
22129450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 41 - 381
Target Start/End: Original strand, 18978873 - 18979194
Alignment:
| Q |
41 |
agttatactaattgatactagaaaacatagtttgttgacaacaattttacaactaaaataaaatttaataaactatcgaggaataaaagtacttgccgac |
140 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18978873 |
agttttactaattgatactagaaaacatagtttgttgacaacaattgtacaactaaaataaaatttaataaactatcgaggaataaaagtacttgccgac |
18978972 |
T |
|
| Q |
141 |
atttgattgtttgaaaattgtgcagaactattggcagattgagtagaatttgattctagtgcaagaacgtccgaatatgttctaccatgcaa-gaaaaac |
239 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||| |
|
|
| T |
18978973 |
atttgattgtttgagaataatgcagaactattggcagattgagtagaactt--tt-----------------gaatatgttctaccatgcaataaaaaac |
18979053 |
T |
|
| Q |
240 |
gcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatccgggtcattttgaacacata |
339 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| |||| ||||||||| |||||||||||||| ||||||||| |
|
|
| T |
18979054 |
gcaggttcttgcggagttggtaattcaactgcataactgctaagataagaaggaactgtcacaatcgaaggtcta-catccgggtcatttcgaacacata |
18979152 |
T |
|
| Q |
340 |
atagaccaatctgaatgtacttaattacttcatttgtagaat |
381 |
Q |
| |
|
|| ||||||||| |||| ||||||| |||||||||||||||| |
|
|
| T |
18979153 |
atcgaccaatctaaatgcacttaatgacttcatttgtagaat |
18979194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 130 - 386
Target Start/End: Original strand, 18990296 - 18990551
Alignment:
| Q |
130 |
tacttgccgacatttgattgtttgaaaattgtgcagaactattggcagattgagtagaatttgattctagtgcaagaacgtccgaatatgttctaccatg |
229 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| | |||||| |||||||||||| |||| | |||||||| |
|
|
| T |
18990296 |
tacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgcaagaacgtttgaatccct-ctaccatg |
18990394 |
T |
|
| Q |
230 |
caagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatccgggtcattt |
329 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||| |
|
|
| T |
18990395 |
caagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgatcgaaggtctagcatccgggtcattt |
18990494 |
T |
|
| Q |
330 |
tgaacacataatagaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
18990495 |
tgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatct |
18990551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 220 - 386
Target Start/End: Original strand, 22085451 - 22085617
Alignment:
| Q |
220 |
ttctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatc |
319 |
Q |
| |
|
||||||| |||| |||||| ||||||| || |||||||||||| ||||||| || |||||||||||||||||||| |||| |||||||||||||| || |
|
|
| T |
22085451 |
ttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctc |
22085550 |
T |
|
| Q |
320 |
cgggtcattttgaacacataatagaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||||| |
|
|
| T |
22085551 |
tgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatct |
22085617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 221 - 386
Target Start/End: Original strand, 22001393 - 22001558
Alignment:
| Q |
221 |
tctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatcc |
320 |
Q |
| |
|
|||||| |||| |||||| ||||||| || ||||||| |||| ||||||| || |||||||||||||||||||| |||| |||||||||||||| || |
|
|
| T |
22001393 |
tctaccttgcaggaaaaatgcaggttgttgtggagttcgtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctct |
22001492 |
T |
|
| Q |
321 |
gggtcattttgaacacataatagaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||||| |
|
|
| T |
22001493 |
gggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatct |
22001558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 21967121 - 21967288
Alignment:
| Q |
219 |
gttctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcat |
318 |
Q |
| |
|
|||||||| |||| |||||| ||||||| || |||||||||||| ||||||| || |||||||||||||||||||| |||| |||||||||||||| | |
|
|
| T |
21967121 |
gttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcct |
21967220 |
T |
|
| Q |
319 |
ccgggtcattttgaacacataatagaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
| || ||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||| ||||| |
|
|
| T |
21967221 |
ctggatcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaaaaatct |
21967288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 221 - 386
Target Start/End: Original strand, 21967569 - 21967734
Alignment:
| Q |
221 |
tctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatcc |
320 |
Q |
| |
|
|||||| |||| |||||| ||||||| || |||||||||||| ||||||| || |||||||||||||||||||| |||| |||||||||||||| || |
|
|
| T |
21967569 |
tctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctct |
21967668 |
T |
|
| Q |
321 |
gggtcattttgaacacataatagaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||| ||||| |
|
|
| T |
21967669 |
ggatcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaaaaatct |
21967734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 41 - 386
Target Start/End: Complemental strand, 50663 - 50318
Alignment:
| Q |
41 |
agttatactaattgatactagaaaacatagtttgttgacaacaattttacaactaaaataaaatttaataaactatcgaggaataaaagtacttgccgac |
140 |
Q |
| |
|
||||||| | ||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
50663 |
agttatatttattaatactagaaaacatagtttgttgacaacaattatacaactattataaaaattaataaactatcgaggaataaaagtacttgcagac |
50564 |
T |
|
| Q |
141 |
atttgattgtttgaaaattgtgcagaactattggcagattgagtagaatttgattctagtgcaagaacgtccgaatatgttctaccatgcaagaaaaacg |
240 |
Q |
| |
|
||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
50563 |
atttgattgattgagaatagtgcagaactattggcagattgagtagaacttgattcttgtgcaagaacgtcggaataagttctaccatgcaagaaaaacg |
50464 |
T |
|
| Q |
241 |
caggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatccgggtcattttgaacacataa |
340 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
50463 |
caggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcacaattgaaggtctagcattcgggtcattttgaacacataa |
50364 |
T |
|
| Q |
341 |
tagaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
||||||||||||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
50363 |
cagaccaatctgaatgcatttaatgacttcatttgtagaataatct |
50318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0264 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: scaffold0264
Description:
Target: scaffold0264; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 43 - 386
Target Start/End: Original strand, 14634 - 14976
Alignment:
| Q |
43 |
ttatactaattgatactagaaaacatagtttgttgacaacaattttacaactaaaataaaatttaataaactatcgaggaataaaagtacttgccgacat |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14634 |
ttatactaattgatactagaaaacatagtttgttgacaacaattatagagctaaa-taaaatttaataaactatcgaggaataaaagtacttgcagacat |
14732 |
T |
|
| Q |
143 |
ttgattgtttgaaaattgtgcagaactattggcagattgagtagaatttgattctagtgcaagaacgtccgaatatgttctaccatgcaagaaaaacgca |
242 |
Q |
| |
|
||||||| ||| || ||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
14733 |
ttgattgaatgagaaaagtgcagaactattggcagattgagtagaacttgattcttgtgcaagaacgtcggaataagttctaccatgcaagaaaaacgca |
14832 |
T |
|
| Q |
243 |
ggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatccgggtcattttgaacacataata |
342 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14833 |
ggttcttgtggagttggtaaatcaattgcataactgctaagataagaagcaactgtcacaattgaaggtctagcattcgggtcattttgaacacataata |
14932 |
T |
|
| Q |
343 |
gaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
14933 |
gaccaatctgaatgcacttaatgacttcatttgtagaataatct |
14976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 43 - 386
Target Start/End: Complemental strand, 8195 - 7852
Alignment:
| Q |
43 |
ttatactaattgatactagaaaacatagtttgttgacaacaattttacaactaaaataaaatttaataaactatcgaggaataaaagtacttgccgacat |
142 |
Q |
| |
|
|||||||| || ||| |||||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8195 |
ttatactattttatattagaaaacatagtttgttgacaacaattatacaaatattgtaaaaattaataaactatcgaggaataaaagtacttgcagacat |
8096 |
T |
|
| Q |
143 |
ttgattgtttgaaaattgtgcagaactattggcagattgagtagaatttgattctagtgcaagaacgtccgaatatgttctaccatgcaagaaaaacgca |
242 |
Q |
| |
|
|||||||| ||| || ||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
8095 |
ttgattgtatgagaaaagtgcagaactattggcagattgagtagaacttgattcttgtgcaagaacgtcggaataagttctaccatgcaagagaaacgca |
7996 |
T |
|
| Q |
243 |
ggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcatccgggtcattttgaacacataata |
342 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
7995 |
ggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcacaattgaaggtctagcattcgggtcattttgaacacataaca |
7896 |
T |
|
| Q |
343 |
gaccaatctgaatgtacttaattacttcatttgtagaataatct |
386 |
Q |
| |
|
|||||||||||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
7895 |
gaccaatctgaatgcatttaatgacttcatttgtagaataatct |
7852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University