View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14819_high_40 (Length: 334)
Name: NF14819_high_40
Description: NF14819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14819_high_40 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 17 - 314
Target Start/End: Original strand, 28675509 - 28675810
Alignment:
| Q |
17 |
tttgaagcagaagggtcattactttgatgtaattaattgtgtcgcgtattcgcagga--ctcaactccttgctattggagcaaatgataataaagtgaaa |
114 |
Q |
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| T |
28675509 |
tttgaagcagcagggtcattactttgatgt---taattgtgtcgcatattcgcaggattctcaactccttgctactggagcagatgataataaagtgaag |
28675605 |
T |
|
| Q |
115 |
gtattcactctcacattgtactttatgctaattaatatttggtttgaaattcttagataaaatgaattgtgcaaacactgaattgatcatgatgatataa |
214 |
Q |
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| T |
28675606 |
gtattcactctcacattgtactttttgctaattaatatttggtttgaatttctaagataaaatgaactgtgcaaacactgaattgatcatgatgatataa |
28675705 |
T |
|
| Q |
215 |
tgtcac-----catgttaattgtgtaataatcaaatatttgtatatgtgtatagtgaaaagtgaaacatagataaaatattggacctagtatgagtaagg |
309 |
Q |
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| T |
28675706 |
tgtcaccagaacatgtttattgtgtaatagtcaaatatttgtacatgtgtatagtgaaaagtgaaacatagataaaatgttggacctagtataagtaagg |
28675805 |
T |
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| Q |
310 |
taaca |
314 |
Q |
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||||| |
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| T |
28675806 |
taaca |
28675810 |
T |
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