View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14819_high_44 (Length: 328)
Name: NF14819_high_44
Description: NF14819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14819_high_44 |
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Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 6 - 317
Target Start/End: Complemental strand, 1256997 - 1256685
Alignment:
| Q |
6 |
agatttgacatagattgattaacatatatgtttatatgaaattttttgtatgaattattttacatagcattatattatgtgtaaaattgttgttgatgtg |
105 |
Q |
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| T |
1256997 |
agatttgacatagattgattaacatatatgtttatatgaaattttttgtatgaattattttacatagcattatattatgtgtaaaattgttgttgatgtg |
1256898 |
T |
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| Q |
106 |
aaattccttgagtgaattttcgttaaggtgaaattgcttgttgatacttgttatgatattggattatattttgctaaattgattgagtattaggtctatt |
205 |
Q |
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| T |
1256897 |
aaattccttgagttaatttttgttaatgtgaaattgcttgttgatacttgttatgatattggattatattttgctaaattgattgagtattaggtctatt |
1256798 |
T |
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| Q |
206 |
gtagacataagctattttgcaataagttaagccataagttaattataggaggtgttacaaaa-ttctatacaagggcattagtttctannnnnnngttac |
304 |
Q |
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| T |
1256797 |
gtagacataagctattttgcaataagttaagccataagttaattataggaggtgttacaaaatttctatacaaggacattagtttctatttttttgttac |
1256698 |
T |
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| Q |
305 |
tgcattttatgat |
317 |
Q |
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| T |
1256697 |
tgcattttatgat |
1256685 |
T |
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