View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14819_high_61 (Length: 282)
Name: NF14819_high_61
Description: NF14819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14819_high_61 |
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Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 23175516 - 23175762
Alignment:
| Q |
21 |
tctgaaactgcatttccatggcattcataatatgtagttagaatgttgttattaaaaaagtagtagagattgtatgctgataaattcatgttggattatg |
120 |
Q |
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| T |
23175516 |
tctgaaactgcatttccatggcattcataatatgtagttagaatgttgttattaaaaaagtagtagagattgtatgctgataaattcatgttggattatg |
23175615 |
T |
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| Q |
121 |
aaatattttgttcagagtaagattgataagttgagggacaacgtgttactttggaggaagcttctaataagattggtatcaggatcaagatggtcaacaa |
220 |
Q |
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| T |
23175616 |
agatattttgttcagagtaagattgataagttgagggacaacatgttactttggaggaaacttctaataagattggtatcaggatcaagatggtcaacaa |
23175715 |
T |
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| Q |
221 |
tcacttcactttcctggtaatagtccctcatctcctctcggtttcat |
267 |
Q |
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| T |
23175716 |
tcacttcactttcctggtaatagtccctcgtctcctctcggtttcat |
23175762 |
T |
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