View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14819_high_63 (Length: 280)
Name: NF14819_high_63
Description: NF14819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14819_high_63 |
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Alignment Details
Target: chr3 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 26618126 - 26617865
Alignment:
| Q |
1 |
aaattatctgcaaaaatgatcctaaaatttacttaagtcaaacctccaaagatgccaagaggattgttactagtaaaatcaaccactgaaaactacacac |
100 |
Q |
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| T |
26618126 |
aaattatctgcaaaaatgatcctaaaatttacttaagtcaaacctccaaagatgccaagaggattgttactagtaaaatcaaccactgaaaactacacac |
26618027 |
T |
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| Q |
101 |
cctgtaaagttctacattagaagtgtgaatctcaatcggaaacctgcaacgatcatctgacggatcaacagttgtgattaatccaagccccccaaagtcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26618026 |
cctgtaaagttctacattagaagtgtgaatctcaatcggaaacctgcaacgatcatctgacggatcaacagttgtgattaatccaagccccccaaagtcg |
26617927 |
T |
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| Q |
201 |
caactttcagctttctgatcatgctcctgataataactattaaaagcatatgatatattact |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26617926 |
caactttcagctttctgatcatgctcctgataataactattaaaagcatatgatatattact |
26617865 |
T |
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