View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14819_low_102 (Length: 219)
Name: NF14819_low_102
Description: NF14819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14819_low_102 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 8931702 - 8931501
Alignment:
| Q |
1 |
gaagatgatgtgaatatgaagaatgatgtgaagagtgatttagatgagtgttttgtttctaatttgttgaattctgttgaaaatagtcatgatcatgatc |
100 |
Q |
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| T |
8931702 |
gaagatgatgtgaatatgaagaatgatgtgaagagtgatttagataagtgttttgtttctaatttgttgaattctgttgaaaatagtcatgatcatgatg |
8931603 |
T |
|
| Q |
101 |
ataagggtttggattctacaaagtctacaccttttgatgttggtggtgctgaaaatggtcatgatcatgatagtaagggtttgaattctgcatcttttga |
200 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
8931602 |
ataacggtttggattctacaaagtctacaccttttgatgttggtggtgctgaaaatggtcatgatcatgatagtaagggtttgatttctgcatcttttga |
8931503 |
T |
|
| Q |
201 |
tg |
202 |
Q |
| |
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|| |
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| T |
8931502 |
tg |
8931501 |
T |
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