View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14819_low_89 (Length: 239)
Name: NF14819_low_89
Description: NF14819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14819_low_89 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 35171261 - 35171036
Alignment:
| Q |
14 |
catcattttgacatgcttttcttacagacaaaggaatccttcccgtagttgatttcatattaactttttggagcctaacatctctatgcctggactcagt |
113 |
Q |
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| T |
35171261 |
catcattttgacatgcttttcttacagacaaaggaatccttcccgtagttgatttcatattaactttttggagcctaacatctctatgcctggactcagt |
35171162 |
T |
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| Q |
114 |
agtagtagtactactgagatcgacagagtcacctccgcagatattttctgcagaaagcataacaacttaaaaccatgccaataaataaaagaatagcaat |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35171161 |
agtagtagtactactgagatcgacagagtcacctccgcagatattttctgcagaaagcataacaacttaaaaccatgccaataaataaaagaatagcaat |
35171062 |
T |
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| Q |
214 |
tagaaagttttgtcacaaattcatcc |
239 |
Q |
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|||||||||||||||||||||||||| |
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| T |
35171061 |
tagaaagttttgtcacaaattcatcc |
35171036 |
T |
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