View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14819_low_91 (Length: 236)
Name: NF14819_low_91
Description: NF14819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14819_low_91 |
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Alignment Details
Target: chr2 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1748099 - 1747885
Alignment:
| Q |
1 |
cacaacgttatataaaatcttgcaaaataaagttatagttgcatcattgcatgcaacctccctcccctttatgagaatcttcgccaaatccacaacaaca |
100 |
Q |
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| T |
1748099 |
cacaatgttgtataaaatcttgcaaaataaa-------ttgcatcattgcatgcaacctccctcccctttctgagattcttcgccaaatccacaacaaca |
1748007 |
T |
|
| Q |
101 |
attatgatgatttccttgcaaaaa-tggtcataacaggtcttttatttgcttgatccattcttaatattcttctttcccaaatatgtcttcttcattttg |
199 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1748006 |
attatgatgatttccttgcaaaaaatggtcataacaggtcttttatttgcttgatccattcttaatattcttctttcccaaatatgtcttcttcattttg |
1747907 |
T |
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| Q |
200 |
atgttataatactcctcattta |
221 |
Q |
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|||||||||||||||||||||| |
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| T |
1747906 |
atgttataatactcctcattta |
1747885 |
T |
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