View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1481_high_8 (Length: 235)
Name: NF1481_high_8
Description: NF1481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1481_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 10158815 - 10159042
Alignment:
| Q |
1 |
tttccttcattttgacaatggtcaactcctacaacatcagcattgctttttattctacgatcttctagttcaaaattgccactatatgaggtagatatat |
100 |
Q |
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| T |
10158815 |
tttccttcattttgacaatggtcaactcctacaacattagcattgctttctattctacgatcttctagttcaaaattgccactatttgaggtagatatat |
10158914 |
T |
|
| Q |
101 |
caattgcatgttgcaaaacctctaactttgattgacctagacaagaatcagctcctacaatgacagcatgttctgctggtccaatattttctagtttaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
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| T |
10158915 |
caattgcatgttgcaaaacctctaactttgattgacctagacaagaatcagctcctacaatgacagcatgttctgctggtccgatattttctaatttaga |
10159014 |
T |
|
| Q |
201 |
cgagtcattatctgcggcagatttgtca |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
10159015 |
cgagtcattatctgcggcagatttgtca |
10159042 |
T |
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