View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1482-Insertion-1 (Length: 745)

Name: NF1482-Insertion-1
Description: NF1482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1482-Insertion-1
NF1482-Insertion-1
[»] chr4 (65 HSPs)
chr4 (8-619)||(51558171-51558782)
chr4 (619-712)||(38486130-38486226)
chr4 (615-699)||(50727782-50727868)
chr4 (615-699)||(50735796-50735882)
chr4 (616-699)||(36886063-36886148)
chr4 (619-712)||(1231428-1231524)
chr4 (619-690)||(12601027-12601099)
chr4 (617-712)||(29616282-29616381)
chr4 (616-712)||(29785406-29785506)
chr4 (615-699)||(33552711-33552797)
chr4 (618-712)||(2629823-2629920)
chr4 (621-743)||(23327979-23328107)
chr4 (619-712)||(23521997-23522093)
chr4 (616-712)||(44324212-44324311)
chr4 (621-690)||(6776719-6776789)
chr4 (621-712)||(38812637-38812731)
chr4 (622-690)||(14296708-14296777)
chr4 (622-690)||(14314956-14315025)
chr4 (618-690)||(24002480-24002553)
chr4 (618-712)||(36497334-36497431)
chr4 (619-712)||(33176905-33177001)
chr4 (619-712)||(46680383-46680479)
chr4 (619-712)||(50178365-50178461)
chr4 (624-690)||(2725011-2725078)
chr4 (616-712)||(9512210-9512309)
chr4 (621-690)||(2787105-2787175)
chr4 (616-699)||(3649767-3649852)
chr4 (622-712)||(41711964-41712057)
chr4 (614-712)||(52949837-52949938)
chr4 (618-712)||(56154738-56154835)
chr4 (621-699)||(4325922-4326002)
chr4 (618-699)||(20517893-20517977)
chr4 (621-699)||(25978487-25978567)
chr4 (625-699)||(39078792-39078868)
chr4 (619-712)||(44649037-44649133)
chr4 (619-690)||(50186669-50186741)
chr4 (617-699)||(50729413-50729497)
chr4 (620-711)||(47361287-47361382)
chr4 (619-699)||(21580157-21580238)
chr4 (621-712)||(29593012-29593106)
chr4 (621-690)||(42870112-42870182)
chr4 (622-690)||(54543130-54543198)
chr4 (620-699)||(55065207-55065287)
chr4 (621-699)||(6973788-6973868)
chr4 (618-712)||(34930032-34930131)
chr4 (621-712)||(20802406-20802500)
chr4 (622-712)||(55594002-55594096)
chr4 (616-699)||(9807286-9807371)
chr4 (618-712)||(11056159-11056256)
chr4 (618-690)||(22318256-22318329)
chr4 (622-712)||(32181380-32181473)
chr4 (615-690)||(13110447-13110523)
chr4 (638-699)||(37865884-37865947)
chr4 (622-699)||(49151976-49152055)
chr4 (619-665)||(2114203-2114249)
chr4 (625-690)||(20694512-20694578)
chr4 (645-690)||(21202880-21202926)
chr4 (618-712)||(52319440-52319542)
chr4 (621-667)||(56487162-56487208)
chr4 (618-690)||(16320660-16320732)
chr4 (626-712)||(24210436-24210525)
chr4 (619-712)||(36743562-36743657)
chr4 (620-690)||(42772929-42773000)
chr4 (708-745)||(29785527-29785565)
chr4 (621-690)||(44640464-44640533)
[»] chr7 (41 HSPs)
chr7 (612-712)||(46633810-46633913)
chr7 (618-712)||(43158566-43158663)
chr7 (616-712)||(40753273-40753372)
chr7 (616-712)||(47953308-47953407)
chr7 (621-712)||(3922586-3922680)
chr7 (619-699)||(26994106-26994188)
chr7 (618-712)||(10932437-10932534)
chr7 (618-690)||(11250759-11250832)
chr7 (618-690)||(17237218-17237291)
chr7 (618-699)||(16963270-16963353)
chr7 (622-699)||(21785003-21785082)
chr7 (622-699)||(44748827-44748906)
chr7 (614-712)||(38301460-38301562)
chr7 (618-690)||(11822365-11822438)
chr7 (615-712)||(9913642-9913742)
chr7 (615-712)||(9927330-9927430)
chr7 (619-690)||(47316579-47316651)
chr7 (618-699)||(18386656-18386739)
chr7 (618-699)||(43368333-43368416)
chr7 (620-690)||(48894859-48894930)
chr7 (622-690)||(11321769-11321838)
chr7 (618-686)||(26371689-26371758)
chr7 (618-712)||(36769449-36769546)
chr7 (609-699)||(41211071-41211163)
chr7 (620-690)||(43189124-43189195)
chr7 (616-689)||(3891920-3891994)
chr7 (618-712)||(1870253-1870350)
chr7 (618-690)||(22723912-22723985)
chr7 (618-690)||(34519650-34519723)
chr7 (621-699)||(26700609-26700689)
chr7 (611-690)||(30849119-30849199)
chr7 (619-688)||(29661467-29661536)
chr7 (619-699)||(34295292-34295374)
chr7 (619-690)||(1363778-1363850)
chr7 (627-712)||(18470800-18470888)
chr7 (625-699)||(37967106-37967182)
chr7 (619-712)||(43213806-43213902)
chr7 (640-690)||(26910312-26910363)
chr7 (616-690)||(46448522-46448597)
chr7 (622-690)||(20127431-20127500)
chr7 (616-680)||(41665476-41665541)
[»] chr2 (42 HSPs)
chr2 (617-733)||(9717292-9717413)
chr2 (612-712)||(37863239-37863342)
chr2 (618-712)||(34338924-34339021)
chr2 (617-743)||(37003769-37003901)
chr2 (618-699)||(7761452-7761535)
chr2 (620-712)||(18685950-18686045)
chr2 (616-690)||(33889381-33889456)
chr2 (616-699)||(3913337-3913422)
chr2 (619-712)||(9732810-9732906)
chr2 (620-712)||(2644968-2645063)
chr2 (619-699)||(28824437-28824519)
chr2 (621-712)||(30326214-30326308)
chr2 (618-712)||(16177762-16177859)
chr2 (618-712)||(33366724-33366821)
chr2 (621-699)||(32498043-32498123)
chr2 (614-699)||(32766379-32766466)
chr2 (621-712)||(37308769-37308864)
chr2 (619-696)||(40692428-40692507)
chr2 (622-712)||(7259011-7259104)
chr2 (619-687)||(13829567-13829636)
chr2 (620-699)||(30798370-30798450)
chr2 (618-690)||(42365715-42365788)
chr2 (621-699)||(2086191-2086270)
chr2 (626-699)||(18793180-18793255)
chr2 (622-699)||(44284757-44284836)
chr2 (618-695)||(11115003-11115081)
chr2 (621-690)||(38992953-38993023)
chr2 (626-712)||(35114899-35114988)
chr2 (639-712)||(42706473-42706549)
chr2 (614-699)||(6896296-6896383)
chr2 (620-712)||(17540829-17540924)
chr2 (625-712)||(39461428-39461518)
chr2 (619-690)||(10399750-10399822)
chr2 (623-690)||(12939202-12939270)
chr2 (622-699)||(30712988-30713067)
chr2 (617-711)||(19513566-19513664)
chr2 (624-699)||(5278720-5278796)
chr2 (621-657)||(1247257-1247293)
chr2 (616-690)||(8112438-8112514)
chr2 (636-690)||(26981606-26981661)
chr2 (625-699)||(4641642-4641721)
chr2 (616-699)||(38623181-38623266)
[»] chr8 (40 HSPs)
chr8 (614-712)||(41709891-41709992)
chr8 (619-699)||(4052608-4052690)
chr8 (617-712)||(34101622-34101720)
chr8 (618-743)||(32303502-32303633)
chr8 (616-690)||(34063266-34063341)
chr8 (618-712)||(3251550-3251647)
chr8 (618-690)||(31513477-31513550)
chr8 (618-712)||(37474814-37474911)
chr8 (618-690)||(38047484-38047557)
chr8 (618-685)||(7394708-7394776)
chr8 (615-712)||(25478357-25478457)
chr8 (618-699)||(30542916-30542999)
chr8 (616-712)||(32019893-32019992)
chr8 (621-690)||(10467202-10467272)
chr8 (618-712)||(39642997-39643094)
chr8 (616-712)||(37664174-37664274)
chr8 (616-712)||(7591339-7591438)
chr8 (616-712)||(12753217-12753316)
chr8 (624-712)||(22999372-22999463)
chr8 (618-699)||(37618286-37618369)
chr8 (616-712)||(40389154-40389253)
chr8 (618-712)||(27104073-27104170)
chr8 (622-690)||(31732188-31732257)
chr8 (622-699)||(8672953-8673032)
chr8 (617-712)||(29672215-29672314)
chr8 (614-699)||(30501273-30501360)
chr8 (618-699)||(41548746-41548829)
chr8 (619-699)||(45446583-45446665)
chr8 (619-690)||(5968759-5968831)
chr8 (619-690)||(17520732-17520804)
chr8 (621-699)||(29610952-29611032)
chr8 (618-699)||(6386704-6386787)
chr8 (625-690)||(10656587-10656653)
chr8 (619-699)||(21272795-21272877)
chr8 (624-699)||(15001594-15001671)
chr8 (618-690)||(35225800-35225873)
chr8 (623-699)||(13406834-13406912)
chr8 (617-690)||(16485702-16485776)
chr8 (621-712)||(17805805-17805899)
chr8 (621-699)||(45114183-45114263)
[»] chr3 (42 HSPs)
chr3 (610-712)||(2135185-2135290)
chr3 (619-712)||(20255159-20255255)
chr3 (618-699)||(5442408-5442491)
chr3 (620-712)||(51259655-51259750)
chr3 (621-712)||(29584990-29585084)
chr3 (618-712)||(31882895-31882992)
chr3 (616-699)||(40094632-40094717)
chr3 (619-699)||(21221235-21221317)
chr3 (618-690)||(43175614-43175687)
chr3 (619-690)||(3695181-3695253)
chr3 (619-712)||(12349045-12349141)
chr3 (615-712)||(28675905-28676005)
chr3 (619-712)||(50386330-50386426)
chr3 (616-712)||(33364649-33364748)
chr3 (625-690)||(1344587-1344653)
chr3 (613-690)||(42636271-42636349)
chr3 (621-690)||(44117078-44117148)
chr3 (620-699)||(24721614-24721695)
chr3 (625-699)||(24571410-24571486)
chr3 (619-712)||(41682927-41683023)
chr3 (636-712)||(25860312-25860391)
chr3 (616-690)||(53557666-53557741)
chr3 (619-699)||(3867523-3867605)
chr3 (618-690)||(22484616-22484689)
chr3 (619-698)||(25927201-25927282)
chr3 (616-699)||(39052709-39052794)
chr3 (619-690)||(38213493-38213565)
chr3 (617-699)||(51925080-51925164)
chr3 (630-699)||(34026796-34026867)
chr3 (618-690)||(6179565-6179638)
chr3 (619-712)||(50678913-50679009)
chr3 (618-710)||(45690779-45690874)
chr3 (620-712)||(51296696-51296789)
chr3 (622-698)||(3964418-3964496)
chr3 (645-712)||(20609548-20609618)
chr3 (621-690)||(47958308-47958378)
chr3 (618-699)||(3864550-3864631)
chr3 (619-690)||(29646205-29646277)
chr3 (619-712)||(49748785-49748881)
chr3 (620-690)||(4851338-4851404)
chr3 (626-699)||(54622678-54622753)
chr3 (617-712)||(21374045-21374143)
[»] chr1 (47 HSPs)
chr1 (620-712)||(35387267-35387362)
chr1 (622-729)||(38663213-38663323)
chr1 (618-712)||(844678-844775)
chr1 (620-712)||(1351391-1351486)
chr1 (621-712)||(6711003-6711097)
chr1 (619-699)||(24339593-24339675)
chr1 (616-688)||(26764747-26764820)
chr1 (620-699)||(32289300-32289381)
chr1 (618-712)||(50304774-50304871)
chr1 (619-712)||(51703118-51703215)
chr1 (619-712)||(26118170-26118266)
chr1 (619-712)||(42512725-42512821)
chr1 (619-712)||(51264618-51264714)
chr1 (619-699)||(49303309-49303391)
chr1 (618-712)||(41973034-41973131)
chr1 (619-712)||(31004255-31004351)
chr1 (625-699)||(32270490-32270566)
chr1 (619-712)||(42510648-42510744)
chr1 (619-712)||(45490830-45490926)
chr1 (621-712)||(41967805-41967900)
chr1 (620-690)||(46155054-46155125)
chr1 (618-698)||(15539844-15539926)
chr1 (621-712)||(17327606-17327700)
chr1 (615-699)||(17888085-17888171)
chr1 (617-690)||(21071761-21071835)
chr1 (616-699)||(28340256-28340340)
chr1 (616-690)||(8839044-8839119)
chr1 (618-699)||(11772586-11772669)
chr1 (616-712)||(42705189-42705288)
chr1 (618-699)||(44737996-44738079)
chr1 (621-712)||(16451250-16451344)
chr1 (616-699)||(30105631-30105717)
chr1 (622-712)||(16386977-16387069)
chr1 (618-690)||(40811325-40811398)
chr1 (615-712)||(45658944-45659044)
chr1 (621-690)||(50540491-50540561)
chr1 (626-712)||(16437485-16437574)
chr1 (621-699)||(5109865-5109945)
chr1 (614-699)||(6029246-6029338)
chr1 (621-690)||(1601318-1601387)
chr1 (653-712)||(12890361-12890423)
chr1 (639-699)||(16704863-16704925)
chr1 (618-712)||(16476109-16476206)
chr1 (708-743)||(51703236-51703271)
chr1 (625-690)||(3414814-3414880)
chr1 (618-664)||(16643186-16643232)
chr1 (622-712)||(7184041-7184134)
[»] chr5 (35 HSPs)
chr5 (618-712)||(11963455-11963552)
chr5 (616-690)||(7770162-7770237)
chr5 (621-712)||(24181512-24181606)
chr5 (618-699)||(27838959-27839042)
chr5 (622-698)||(31770480-31770558)
chr5 (621-712)||(32528829-32528923)
chr5 (616-699)||(4689581-4689666)
chr5 (618-712)||(8136951-8137048)
chr5 (618-712)||(34795001-34795098)
chr5 (618-690)||(35701415-35701488)
chr5 (618-712)||(41459702-41459799)
chr5 (621-690)||(3735495-3735565)
chr5 (618-712)||(31644559-31644657)
chr5 (621-712)||(39788307-39788401)
chr5 (619-699)||(39918635-39918717)
chr5 (618-690)||(2351818-2351891)
chr5 (620-699)||(29241506-29241587)
chr5 (615-690)||(4664969-4665045)
chr5 (618-699)||(7208115-7208198)
chr5 (636-712)||(22493322-22493401)
chr5 (625-712)||(7523286-7523376)
chr5 (619-699)||(40489465-40489546)
chr5 (618-712)||(31879961-31880058)
chr5 (617-699)||(18470312-18470396)
chr5 (626-712)||(41790356-41790444)
chr5 (619-684)||(5571543-5571609)
chr5 (621-712)||(23091192-23091286)
chr5 (619-699)||(37148475-37148557)
chr5 (621-699)||(5598608-5598688)
chr5 (625-712)||(553511-553601)
chr5 (625-690)||(32092874-32092940)
chr5 (619-712)||(8560868-8560964)
chr5 (621-664)||(40182553-40182596)
chr5 (626-690)||(7725702-7725767)
chr5 (616-699)||(24036358-24036442)
[»] chr6 (31 HSPs)
chr6 (619-712)||(11382176-11382272)
chr6 (612-712)||(17867949-17868052)
chr6 (612-712)||(17877732-17877835)
chr6 (616-712)||(32409768-32409867)
chr6 (622-712)||(166845-166938)
chr6 (622-712)||(3259797-3259890)
chr6 (618-690)||(24203500-24203573)
chr6 (618-699)||(11613709-11613792)
chr6 (621-712)||(11212371-11212465)
chr6 (621-690)||(14807939-14808009)
chr6 (620-688)||(3290799-3290868)
chr6 (618-712)||(15276855-15276952)
chr6 (622-712)||(3932729-3932822)
chr6 (618-712)||(10960114-10960211)
chr6 (618-690)||(15277198-15277271)
chr6 (618-690)||(32860189-32860262)
chr6 (616-699)||(34176958-34177043)
chr6 (619-712)||(3379824-3379920)
chr6 (619-690)||(10485295-10485367)
chr6 (616-690)||(2615034-2615109)
chr6 (616-690)||(31870013-31870088)
chr6 (624-712)||(10324035-10324126)
chr6 (624-712)||(11279242-11279333)
chr6 (618-690)||(23636361-23636434)
chr6 (650-712)||(24242778-24242843)
chr6 (619-690)||(14925136-14925208)
chr6 (616-712)||(11675290-11675389)
chr6 (621-699)||(8177803-8177883)
chr6 (619-712)||(14925375-14925471)
chr6 (619-690)||(18057657-18057729)
chr6 (623-690)||(33041404-33041472)
[»] scaffold0054 (1 HSPs)
scaffold0054 (618-712)||(23689-23786)
[»] scaffold0027 (1 HSPs)
scaffold0027 (618-712)||(15286-15383)
[»] scaffold0014 (1 HSPs)
scaffold0014 (620-706)||(102069-102158)
[»] scaffold0360 (1 HSPs)
scaffold0360 (620-712)||(15260-15355)
[»] scaffold0729 (1 HSPs)
scaffold0729 (621-690)||(4467-4537)
[»] scaffold0280 (1 HSPs)
scaffold0280 (619-690)||(13573-13645)
[»] scaffold0957 (1 HSPs)
scaffold0957 (614-699)||(2377-2464)
[»] scaffold0208 (1 HSPs)
scaffold0208 (618-699)||(2224-2306)
[»] scaffold0098 (1 HSPs)
scaffold0098 (619-699)||(51566-51648)
[»] scaffold0050 (1 HSPs)
scaffold0050 (625-699)||(42843-42918)
[»] scaffold0181 (1 HSPs)
scaffold0181 (618-690)||(18977-19050)
[»] scaffold0025 (1 HSPs)
scaffold0025 (626-699)||(5332-5407)
[»] scaffold0650 (1 HSPs)
scaffold0650 (622-698)||(1532-1610)


Alignment Details
Target: chr4 (Bit Score: 525; Significance: 0; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 525; E-Value: 0
Query Start/End: Original strand, 8 - 619
Target Start/End: Original strand, 51558171 - 51558782
Alignment:
Q  8 gatagtttgttacagggttgattgtgtagctaagttagaatgatctagatgagatcctctttcccctctctgtcatggtttatcttcatcttagctctaa 107  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51558171 gatagtttgttgcagggttgattgtgtagctaagttagaatgatctagatgagatcctctttcccctctctgtcatggtttatcttcatcttagctctaa 51558270  T
Q  108 ggtaacataattatggttcaggtgcatggttattgattgtaagaagtttgagtgtggtgataaaggtaacaactgtgtttgttgatgtctatggtttggg 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51558271 ggtaacataattatggttcaggtgcatggttattgattgtaagaagtttgagtgtggtgataaaggtaacaactgtgtttggtgatgtctatggtttggg 51558370  T
Q  208 tgcaatctccaaaatcttaaaa-gnnnnnnnccaatatattctttcatacgaggattttagtaaaataaagaaaaatcaacctctttacaatatagggta 306  Q
    |||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51558371 tgcaatctccaaaatcttaaaaagttattttccaatatattctttcatacgaggattttagtaaaataaagaaaaataaacctctttacaatatagggta 51558470  T
Q  307 ctactct--tattttatcttcaaatctctccctccattctctcaatcaaagttagaattttccttgtgtcagtcggacataaatcttcattcctgcagtg 404  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51558471 ctactctcttattttatcttcaaatctctccctccattctctccatcaaagttagaattttccttgtgtcagtcggacataaatcttcattcctgcagtg 51558570  T
Q  405 ccattagaagcaaagtattctttcttctaattttgagtaatttcacccttttatcttcagggttctccattttccagttttcctcccagcgacccggtga 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  51558571 ccattagaagcaaagtattctttcttctaattttgagtaatttcacccttttatcttcagggttctccattttccaatttccctcccagcgacctggtga 51558670  T
Q  505 gtttcacctttggattgttttgccgcgtaagatgctgtgtggttttaagtttaacatagtgatgaagtgctagtcctttgccttcgtttaacacaataag 604  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  51558671 gtttcacctttggattgttttgcggcgtaagatgctatgtggttttaagtttaacatagtgatgaagtgc---tcctttgccttcgtttaacacaataag 51558767  T
Q  605 agatgagagactaag 619  Q
    |||||||||||||||    
T  51558768 agatgagagactaag 51558782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 38486130 - 38486226
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  38486130 gggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaact 38486226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 615 - 699
Target Start/End: Original strand, 50727782 - 50727868
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  50727782 ctaagggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttcag 50727868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 615 - 699
Target Start/End: Original strand, 50735796 - 50735882
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  50735796 ctaagggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttcag 50735882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 616 - 699
Target Start/End: Complemental strand, 36886148 - 36886063
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  36886148 taagggtgcgtttgatttgctaaaaaataaaggacaagacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 36886063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 619 - 712
Target Start/End: Complemental strand, 1231524 - 1231428
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||| | ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1231524 gggtgcgtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaact 1231428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 619 - 690
Target Start/End: Complemental strand, 12601099 - 12601027
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  12601099 gggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaa 12601027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 712
Target Start/End: Complemental strand, 29616381 - 29616282
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca--gtacaggataaact 712  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||  |||||||| |||||    
T  29616381 aagggtgcgtttgatttgctaaaaaatgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaaggtacaggacaaact 29616282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 29785406 - 29785506
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaa-taaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaac 711  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||    
T  29785406 taagggtgcgtttgatttgctaaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 29785505  T
Q  712 t 712  Q
    |    
T  29785506 t 29785506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 615 - 699
Target Start/End: Original strand, 33552711 - 33552797
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||||||||| |||| ||||||||||||||| ||||||||||||    
T  33552711 ctaagggtgcgtttgatttgctaaaaaataaaggacaggacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcag 33552797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 2629823 - 2629920
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||||||| |||||| ||||||||||||| ||||||||||| |||||||| |||||    
T  2629823 agggtgcgtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtcccgtgtttgatttgtaaaactgtttcaggtacaggacaaact 2629920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 621 - 743
Target Start/End: Complemental strand, 23328107 - 23327979
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacagg--ataaactcat 715  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||  |||||||| |||| ||||||||||| |||||||  | ||||||||    
T  23328107 gtgcgtttgatttgctaaaaaatgaaggatatgacagaacaactctagttgtcatgtgtttgacttgtaaaactgtttcaggtacaggacaaaaactcat 23328008  T
Q  716 atttttgtccctca-ccaaccacaacaca 743  Q
    |||||||||||||| | ||||||||||||    
T  23328007 atttttgtccctcagcaaaccacaacaca 23327979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 619 - 712
Target Start/End: Complemental strand, 23522093 - 23521997
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  23522093 gggtgcgtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 23521997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 44324212 - 44324311
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||||||||| | |||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  44324212 taagggtgcgtttgatttgctagaaaatgaaggacatgacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 44324311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 6776789 - 6776719
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  6776789 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaa 6776719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 621 - 712
Target Start/End: Complemental strand, 38812731 - 38812637
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||| |||| ||||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  38812731 gtgcgtttcatttgctaaaaaataaaggacaggacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 38812637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 622 - 690
Target Start/End: Complemental strand, 14296777 - 14296708
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgtaaa 690  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  14296777 tgcgtttgatttgctaaaaaataaaggacaggacataacaactctaattgtccagtgtttgatttgtaaa 14296708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 622 - 690
Target Start/End: Complemental strand, 14315025 - 14314956
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgtaaa 690  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  14315025 tgcgtttgatttgctaaaaaataaaggacaggacataacaactctaattgtccagtgtttgatttgtaaa 14314956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 24002553 - 24002480
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||    
T  24002553 agggtgcgtttgatttgctaaaaaatgaaggacagtacagaacaactctagttgtccagtgtttgatttgtaaa 24002480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 36497431 - 36497334
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||| | |||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  36497431 agggtgcgtttgatttgctaaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 36497334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 33176905 - 33177001
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||| |||||||||| ||||||||||||||| |||||||||||| | || |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  33176905 gggtacgtttgatttgctaaaaaataaaggatatgacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 33177001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 46680383 - 46680479
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||| |||| |||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  46680383 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 46680479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 50178365 - 50178461
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||| ||  |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  50178365 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 50178461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 624 - 690
Target Start/End: Original strand, 2725011 - 2725078
Alignment:
Q  624 cgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  2725011 cgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaa 2725078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 9512210 - 9512309
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||| |||||||||||| ||||||||  |||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||| ||||| ||||||||    
T  9512210 taaggatgcgtttgatttgctaaaaaacgaaggacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaact 9512309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 2787175 - 2787105
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||    
T  2787175 gtgcgtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaa 2787105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 616 - 699
Target Start/End: Complemental strand, 3649852 - 3649767
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||||||  |||||||| ||||||| ||||||||||||| | ||||| |||||||||||||| ||||||||||||    
T  3649852 taagggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaactccagttgtctagtgtttgatttgtaaaactgtttcag 3649767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 622 - 712
Target Start/End: Complemental strand, 41712057 - 41711964
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa-ctgtttca-gtacaggataaact 712  Q
    |||||||||||||||||||||| || || |  |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||    
T  41712057 tgcgtttgatttactaaaaaatgaatgatagaacagaacaactctagttgtccagtgtttgatttgtaaagctgtttcaggtacaggacaaact 41711964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 614 - 712
Target Start/End: Complemental strand, 52949938 - 52949837
Alignment:
Q  614 actaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaa 710  Q
    |||| |||||||||||||||  |||||||| ||||||| |||| |||||||||| ||||||||||||| |||||| ||||||||||| |||||||| |||    
T  52949938 actaggggtgcgtttgatttgttaaaaaatgaaggacacgacaaaacaactctagttgtccagtgtttcatttgtaaaactgtttcaggtacaggacaaa 52949839  T
Q  711 ct 712  Q
    ||    
T  52949838 ct 52949837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 56154835 - 56154738
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||  | |||||||||||| || |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  56154835 agggtgcgtttgatttgctaaaaaatgaaggttaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggaaaaact 56154738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 621 - 699
Target Start/End: Complemental strand, 4326002 - 4325922
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||| ||||||||||||| ||| |||| |||||||||| |||| ||||||||||||||| ||||||||||||    
T  4326002 gtgcgtttgatttgctaaaaaataaagtacaagacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcag 4325922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 20517893 - 20517977
Alignment:
Q  618 agggtgcgtttgatttactaaaaaa-taaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||| |||||||| | ||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  20517893 agggtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcag 20517977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 621 - 699
Target Start/End: Original strand, 25978487 - 25978567
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||  ||||||||||||||||||||| |||||| || ||| ||||||||||||||||| ||||||||||||    
T  25978487 gtgcgtttgatttgttaaaaaataaaggacatgacaaaacaacttcaattatccagtgtttgatttgtaaaactgtttcag 25978567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 39078868 - 39078792
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||  |||||||| ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||    
T  39078868 gtttgatttgttaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcag 39078792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 44649037 - 44649133
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||| | || |||||| |||||||||| ||||||||||| |||||||| |||||    
T  44649037 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttatccagtttttgatttgtaaaactgtttcaggtacaggacaaact 44649133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 619 - 690
Target Start/End: Complemental strand, 50186741 - 50186669
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||| ||||||||| ||||||| || |||||||||||| |||| ||||||||||||||||||    
T  50186741 gggtgcgtttgatttgctaaaaaatgaaggacaagaaagaacaactctagttgttcagtgtttgatttgtaaa 50186669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 617 - 699
Target Start/End: Original strand, 50729413 - 50729497
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||||  |||||||| ||||||| ||||||||||| ||  |||||||||||||||||||| ||||||||||||    
T  50729413 aagggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcag 50729497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 620 - 711
Target Start/End: Original strand, 47361287 - 47361382
Alignment:
Q  620 ggtgcgtttgatttactaaaaaa-taaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaac 711  Q
    |||||||||||||| |||||||| | ||||||| |||||||||||| || |||||||||||||||||||| ||||||||||| |||||||| ||||    
T  47361287 ggtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 47361382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 619 - 699
Target Start/End: Complemental strand, 21580238 - 21580157
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||| ||| |||||||||| |||||||||| ||||||||||||    
T  21580238 gggtgcgtttgatttgctaaaaaat-aaggacaggacagaacaattctaattgtccagtatttgatttgtaaaactgtttcag 21580157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 621 - 712
Target Start/End: Complemental strand, 29593106 - 29593012
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| ||||||||| ||||||| ||||||||| | ||  |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  29593106 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaccttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 29593012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 42870182 - 42870112
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| |||| |||| |||||||||||| |||||||||| |||||| ||||||||||||||||    
T  42870182 gtgcgtttgatttgctaagaaatgaaggacatgacataacaactctagttgtccggtgtttgatttgtaaa 42870112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 622 - 690
Target Start/End: Complemental strand, 54543198 - 54543130
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  54543198 tgcgtttgatttgctaaaaaatgaag-acatgacagaacaactctagttgttcagtgtttgatttgtaaa 54543130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 620 - 699
Target Start/End: Original strand, 55065207 - 55065287
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||| || | ||||||||||||||| ||||||||||||    
T  55065207 ggtgcgtttaatttgctaaaaaataa-ggacatgacagaacaactctagttattcagtgtttgatttgtaaaactgtttcag 55065287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 621 - 699
Target Start/End: Original strand, 6973788 - 6973868
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||| ||||||||| ||||||| || |||||||| | | |||||||||||||||||||| ||||||||||||    
T  6973788 gtgcgtttgatttgctaaaaaatgaaggacaggatagaacaacttttgttgtccagtgtttgatttgtaaaactgtttcag 6973868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 34930131 - 34930032
Alignment:
Q  618 agggtgcgtttgatttactaaaaaa--taaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag-tacaggataaact 712  Q
    |||||| | ||||||||||||||||  |||||  |||||||||| ||||||| |||||||||||||||||||| |||||||||||| ||||| |||||||    
T  34930131 agggtgggcttgatttactaaaaaaaataaagatcatgacagaataactctaattgtccagtgtttgatttgtaaaactgtttcagatacagaataaact 34930032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 621 - 712
Target Start/End: Original strand, 20802406 - 20802500
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||  |||||||| ||||| | |||||||||||| || || ||||||||||||||||| ||||||||||| |||||||| |||||    
T  20802406 gtgcgtttgatttgttaaaaaatgaaggataggacagaacaactttagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 20802500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 622 - 712
Target Start/End: Complemental strand, 55594096 - 55594002
Alignment:
Q  622 tgcgtttgatttactaaaaaa-taaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||| |||||||| | ||| ||| ||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||| ||||||||    
T  55594096 tgcgtttgatttgctaaaaaaatgaagaacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacatgataaact 55594002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 616 - 699
Target Start/End: Complemental strand, 9807371 - 9807286
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||||| |||||| || ||||| | ||||| ||||| ||  |||||||||||||||||||| ||||||||||||    
T  9807371 taagggtgcgtttgatttgctaaaacatgaaggataggacaggacaacttcagttgtccagtgtttgatttgtaaaactgtttcag 9807286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 11056256 - 11056159
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| |||| || || | |||||||  | |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  11056256 agggtgcgtttgatttgctaaaaaatgaaggtcaggataaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 11056159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 618 - 690
Target Start/End: Original strand, 22318256 - 22318329
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||| | |  |||| |||||||||||||||||    
T  22318256 agggtgcgtttgatttgttaaaaaatgaaggacatgacagaacaaccccagctgtctagtgtttgatttgtaaa 22318329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 622 - 712
Target Start/End: Complemental strand, 32181473 - 32181380
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttc-agtacaggataaact 712  Q
    |||||||||||| ||||||||| ||||| | ||||  |||||| || |||||||||||||||||||| |||||||||| ||||||||| |||||    
T  32181473 tgcgtttgatttgctaaaaaatgaaggataggacatgacaactttagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaact 32181380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 615 - 690
Target Start/End: Complemental strand, 13110523 - 13110447
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaa-ctctattgtccagtgtttgatttgtaaa 690  Q
    ||||||||| ||||||||| ||||||||| || |||||||||||| ||  ||  |||||||||||||||||||||||    
T  13110523 ctaagggtgtgtttgatttgctaaaaaatgaaagacatgacagaaaaatttcagttgtccagtgtttgatttgtaaa 13110447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 638 - 699
Target Start/End: Complemental strand, 37865947 - 37865884
Alignment:
Q  638 aaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||| ||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  37865947 aaaaatgaaggacacgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcag 37865884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 622 - 699
Target Start/End: Original strand, 49151976 - 49152055
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||| ||||||||| |||||||  ||||||||||| || || |||||||||| |||||| ||||||||||||    
T  49151976 tgcgtttgatttgctaaaaaatgaaggacagaacagaacaactttagttatccagtgtttaatttgtaaaactgtttcag 49152055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 665
Target Start/End: Complemental strand, 2114249 - 2114203
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactc 665  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  2114249 gggtgtgtttgatttgctaaaaaatgaaggacatgacagaacaactc 2114203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 690
Target Start/End: Complemental strand, 20694578 - 20694512
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||| ||||||| | |||||||  |||||||||||||| ||||||||||||| |||||||||    
T  20694578 gtttgatttgctaaaaactgaaggacaacacagaacaactctagttgtccagtgtttaatttgtaaa 20694512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 690
Target Start/End: Complemental strand, 21202926 - 21202880
Alignment:
Q  645 aaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  21202926 aaggacaggacagaacaactctagttgtccagtgtttgatttgtaaa 21202880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 52319542 - 52319440
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaaca-----actcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataa 709  Q
    ||||||||||||||||  |||||||| ||||||| |||||||||     |||||| ||||||| |||||||||||| ||||||||||| |||||||| ||    
T  52319542 agggtgcgtttgatttgttaaaaaatgaaggacaggacagaacagaacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaa 52319443  T
Q  710 act 712  Q
    |||    
T  52319442 act 52319440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 621 - 667
Target Start/End: Original strand, 56487162 - 56487208
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta 667  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  56487162 gtgcgtttgatttgctaaaaaatgaaagacatgacagaacaactcta 56487208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 16320732 - 16320660
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||| | ||||||||| ||||||  ||||||||||||| | ||||||||| |||||||||||||    
T  16320732 agggtgcgtttgatatgctaaaaaat-aaggactggacagaacaactccagttgtccagtatttgatttgtaaa 16320660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 712
Target Start/End: Complemental strand, 24210525 - 24210436
Alignment:
Q  626 tttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||| ||||||||| || || | ||| ||||||||||| |||||| ||||||||||||| ||||||||||| |||||||| |||||    
T  24210525 tttgatttgctaaaaaatgaaagataggacggaacaactctaattgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaact 24210436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 36743562 - 36743657
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| || |||||| ||||| || ||| |||||||||| |||| |||||||||| |||| ||||||||||| |||||||| |||||    
T  36743562 gggtgcgtttgatttgct-aaaaatgaaggatataacaaaacaactctagttgttcagtgtttgaattgtaaaactgtttcaggtacaggacaaact 36743657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 42773000 - 42772929
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| | |||||||| || ||||||||| ||||||| || || || |||||||||||||||||    
T  42773000 ggtgcgtttgattcattaaaaaatgaatgacatgacataacaactttagttttcaagtgtttgatttgtaaa 42772929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 708 - 745
Target Start/End: Original strand, 29785527 - 29785565
Alignment:
Q  708 aaactcatatttttgtccctcacc-aaccacaacacagc 745  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29785527 aaactcatatttttgtccctcaccaaaccacaacacagc 29785565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 44640533 - 44640464
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  | |||| ||||||||||||||||||    
T  44640533 gtgcgtttgatctactaaaaaatgaatgaca-gacagaacaacttcagttgtacagtgtttgatttgtaaa 44640464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 6e-30; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 612 - 712
Target Start/End: Complemental strand, 46633913 - 46633810
Alignment:
Q  612 agactaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag-tacaggata 708  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||| |    
T  46633913 agactaagggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggaca 46633814  T
Q  709 aact 712  Q
    ||||    
T  46633813 aact 46633810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 43158566 - 43158663
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  43158566 agggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 43158663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 616 - 712
Target Start/End: Complemental strand, 40753372 - 40753273
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||| |||||||||||| ||||||||||| |||||||| |||||    
T  40753372 taagggtgcgtttgatttgctaaaaaataagggacatgacagaacaactctcgttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaact 40753273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 616 - 712
Target Start/End: Complemental strand, 47953407 - 47953308
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||||| ||||||||| || |||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  47953407 taagggtgcgtttgatttgctaaaaaatgaacgacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 47953308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 621 - 712
Target Start/End: Original strand, 3922586 - 3922680
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||| |||||    
T  3922586 gtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaact 3922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 619 - 699
Target Start/End: Original strand, 26994106 - 26994188
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  26994106 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 26994188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 10932437 - 10932534
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  10932437 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 10932534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 11250832 - 11250759
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  11250832 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttcatttgtaaa 11250759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 17237291 - 17237218
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  17237291 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaa 17237218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 618 - 699
Target Start/End: Complemental strand, 16963353 - 16963270
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||||  |||||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  16963353 agggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactctaattgtccagtgtttgatttgtaaaactgtttcag 16963270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 622 - 699
Target Start/End: Complemental strand, 21785082 - 21785003
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  21785082 tgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcag 21785003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 622 - 699
Target Start/End: Complemental strand, 44748906 - 44748827
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  44748906 tgcgtttgatttgctaaaaaataaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 44748827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 614 - 712
Target Start/End: Complemental strand, 38301562 - 38301460
Alignment:
Q  614 actaagggtgcgtttgatttact-aaaaaataaaggacatgacagaacaact-ctattgtccagtgtttgatttgt-aaactgtttca-gtacaggataa 709  Q
    |||||||||||||||||||| || ||||||| ||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||| |||||||| ||    
T  38301562 actaagggtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactccaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaa 38301463  T
Q  710 act 712  Q
    |||    
T  38301462 act 38301460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 11822438 - 11822365
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||| |||||    
T  11822438 agggtgcgtttgatttactaaaaaataaaggacaggacagaacaacttcacttgtccagtgtttgattcgtaaa 11822365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 615 - 712
Target Start/End: Complemental strand, 9913742 - 9913642
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaac 711  Q
    |||||||||| |||||||| ||||||||| ||||||| ||||||||||||| | |||||| ||||||||||||| ||||| ||||| |||||||||||||    
T  9913742 ctaagggtgcatttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccggtgtttgatttgtaaaactatttcaggtacaggataaac 9913643  T
Q  712 t 712  Q
    |    
T  9913642 t 9913642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 615 - 712
Target Start/End: Complemental strand, 9927430 - 9927330
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaac 711  Q
    |||||||||| |||||||| ||||||||| ||||||| ||||||||||||| | |||||| ||||||||||||| ||||| ||||| |||||||||||||    
T  9927430 ctaagggtgcatttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccggtgtttgatttgtaaaactatttcaggtacaggataaac 9927331  T
Q  712 t 712  Q
    |    
T  9927330 t 9927330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 690
Target Start/End: Original strand, 47316579 - 47316651
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  47316579 gggtgcgtttgatttgctaaaaaatgaaggatatgacagaataactctagttgtccagtgtttgatttgtaaa 47316651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 618 - 699
Target Start/End: Complemental strand, 18386739 - 18386656
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||| ||||||||| ||||||||| ||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||    
T  18386739 agggtgtgtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcag 18386656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 618 - 699
Target Start/End: Complemental strand, 43368416 - 43368333
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||| |||||||||| ||||||||| ||||||| ||||||||||||| | |||||||||||||||||||| ||||||||||||    
T  43368416 agggtccgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcag 43368333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 48894930 - 48894859
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||| | |||||||||||||||||||||||    
T  48894930 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaa 48894859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 622 - 690
Target Start/End: Original strand, 11321769 - 11321838
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  11321769 tgcgtttgatttgctaaaaaatgaagaacatgacagaacaactctagttgtccaatgtttgatttgtaaa 11321838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 618 - 686
Target Start/End: Original strand, 26371689 - 26371758
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttg 686  Q
    |||||||||||||||| ||||||||| ||||| | ||||||||||||||| |||||||||||||||||||    
T  26371689 agggtgcgtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttg 26371758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 36769449 - 36769546
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||| ||||||||| ||||||||| |||||||  | |||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  36769449 agggtgtgtttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 36769546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 699
Target Start/End: Original strand, 41211071 - 41211163
Alignment:
Q  609 gagagactaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||  ||||| |||||||||| ||||||||| ||||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||||    
T  41211071 gagagacatagggtacgtttgatttgctaaaaaatgaaggacaggacagaacaactcaagttgcccagtgtttgatttgtaaaactgtttcag 41211163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 620 - 690
Target Start/End: Original strand, 43189124 - 43189195
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||| |||||||||  ||||||||||| |||||||||| |||||||||||||||||| ||||    
T  43189124 ggtgcgtttgatttgctaaaaaatggaggacatgacaaaacaactctagttgtccagtgtttgatttataaa 43189195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 616 - 689
Target Start/End: Original strand, 3891920 - 3891994
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaa 689  Q
    ||||||||  |||||||| ||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  3891920 taagggtgtatttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccaatgtttgatttgtaa 3891994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 1870350 - 1870253
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||| |||||||| ||||||||| |||||||   ||||||||||||| |||| ||||||||||||||| ||||||||||| ||||| ||||||||    
T  1870350 agggtgcatttgatttgctaaaaaatgaaggacagtgcagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaact 1870253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 618 - 690
Target Start/End: Original strand, 22723912 - 22723985
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||||  |||||||| |||||  |||||||||||||| | |||||||||||||||||||||||    
T  22723912 agggtgcgtttgatttgataaaaaatgaaggatgtgacagaacaactccagttgtccagtgtttgatttgtaaa 22723985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 34519723 - 34519650
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||| ||  |||||||||||| || |||||||    
T  34519723 agggtgcgtttgatttaataaaaaataaaggacaggacagaacaacttcagttgtccagtgttcgaattgtaaa 34519650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 621 - 699
Target Start/End: Complemental strand, 26700689 - 26700609
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgta-aactgtttcag 699  Q
    |||||||||||||  |||||||| |||||||||||| ||||| || | ||||||||||||||||||||| |||||||||||    
T  26700689 gtgcgtttgatttggtaaaaaatgaaggacatgacataacaattccagttgtccagtgtttgatttgtataactgtttcag 26700609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 611 - 690
Target Start/End: Original strand, 30849119 - 30849199
Alignment:
Q  611 gagactaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||| |||||||||||||||  |||||||| ||||||| |||||||||| |||| ||||||| || ||||||||||||    
T  30849119 gagactatgggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaattctagttgtccaatgattgatttgtaaa 30849199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 619 - 688
Target Start/End: Complemental strand, 29661536 - 29661467
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgta 688  Q
    ||||||||||||||| ||||||||| ||||| | || |||||||||||| |||||||||||||||||||||    
T  29661536 gggtgcgtttgatttgctaaaaaatgaaggata-gatagaacaactctagttgtccagtgtttgatttgta 29661467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 619 - 699
Target Start/End: Original strand, 34295292 - 34295374
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||  |||||||||||| || | ||||||||||||| | || ||||||||||||||||| ||||||||||||    
T  34295292 gggtgcgtttgattagctaaaaaataaaagataggacagaacaactccagttatccagtgtttgatttgtaaaactgtttcag 34295374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 690
Target Start/End: Complemental strand, 1363850 - 1363778
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgtaaa 690  Q
    |||||| |||||||| ||||||||||||||| | |||| |||||| ||  |||||||||||||||||||||||    
T  1363850 gggtgcctttgatttgctaaaaaataaaggataggacaaaacaacttcagttgtccagtgtttgatttgtaaa 1363778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 712
Target Start/End: Complemental strand, 18470888 - 18470800
Alignment:
Q  627 ttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||| ||| ||||| ||||||| || |||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||    
T  18470888 ttgatttgctacaaaatgaaggacaggatagaacaactctagttgtcgagtgtttgatttgtaaaactgtttcaggtacaggacaaact 18470800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 37967182 - 37967106
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||| ||||||||| |||||||||||| ||||||| || || ||| ||||||||||||| ||||||||||||    
T  37967182 gtttgatttgctaaaaaatgaaggacatgacaaaacaactttagttctccggtgtttgatttgtaaaactgtttcag 37967106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 43213806 - 43213902
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactg-tttcagtacaggataaact 712  Q
    |||| |||||||||| ||||||||| ||| ||| ||||||||||| ||  ||||| |||||||||||||| |||||| ||||||||||||| |||||    
T  43213806 gggtacgtttgatttgctaaaaaatgaagaacaggacagaacaacttcagttgtctagtgtttgatttgtaaaactgttttcagtacaggacaaact 43213902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 690
Target Start/End: Original strand, 26910312 - 26910363
Alignment:
Q  640 aaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||| ||||||||||||||||||||  | |||||||||||||||||||||||    
T  26910312 aaatgaaggacatgacagaacaactacagttgtccagtgtttgatttgtaaa 26910363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 690
Target Start/End: Original strand, 46448522 - 46448597
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||||||  ||||||||| | |||| || |||||||| ||  ||||| |||||||||||||||||    
T  46448522 taagggtgcgtttgatttgttaaaaaatagaagacaagatagaacaacttcagttgtctagtgtttgatttgtaaa 46448597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 690
Target Start/End: Complemental strand, 20127500 - 20127431
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||| |||| |||| || || | ||||||||||||| | |||||||||||||||||| ||||    
T  20127500 tgcgtttgatttgctaataaatgaaagataggacagaacaactccagttgtccagtgtttgatttttaaa 20127431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 680
Target Start/End: Original strand, 41665476 - 41665541
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgttt 680  Q
    |||||||| |||||||||  |||| ||||||||| | ||||||||||||| | |||||||||||||    
T  41665476 taagggtgtgtttgatttgataaataataaaggataggacagaacaactccagttgtccagtgttt 41665541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 5e-27; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 617 - 733
Target Start/End: Complemental strand, 9717413 - 9717292
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacagg--ataaac 711  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||| |||||||  | ||||    
T  9717413 aagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaaaac 9717314  T
Q  712 tcatatttttgtccctcaccaa 733  Q
    |||| |||||||||||||||||    
T  9717313 tcatgtttttgtccctcaccaa 9717292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 612 - 712
Target Start/End: Original strand, 37863239 - 37863342
Alignment:
Q  612 agactaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggata 708  Q
    ||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |    
T  37863239 agacttagggtgcgcttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggaca 37863338  T
Q  709 aact 712  Q
    ||||    
T  37863339 aact 37863342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 34339021 - 34338924
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  34339021 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 34338924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 617 - 743
Target Start/End: Original strand, 37003769 - 37003901
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa-ctgtttca-gtac--aggataaac 711  Q
    ||||||||||||||||| ||||||||| ||||||| |||| |||||||| | ||||||||||||||||||||||| |||||||| ||||  |  | ||||    
T  37003769 aagggtgcgtttgatttgctaaaaaatgaaggacaggacataacaactcaagttgtccagtgtttgatttgtaaatctgtttcaggtacataacaaaaac 37003868  T
Q  712 tcatatttttgtccctcacc-aaccacaacaca 743  Q
    |||||||||||||||||||| ||||||||||||    
T  37003869 tcatatttttgtccctcaccaaaccacaacaca 37003901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 7761452 - 7761535
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  7761452 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 7761535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 620 - 712
Target Start/End: Complemental strand, 18686045 - 18685950
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  18686045 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 18685950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 616 - 690
Target Start/End: Complemental strand, 33889456 - 33889381
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  33889456 taagggtgcgtttgatttactaaaaaatgaaggacaggacagaacaactctagttgtctagtgtttgatttgtaaa 33889381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 616 - 699
Target Start/End: Original strand, 3913337 - 3913422
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||| |||||||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||    
T  3913337 taaggatgcgtttgatttgctaaaaaataaaggacatgacaaaacaattctagttgtccagtgtttgatttgtaaaactgtttcag 3913422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 9732810 - 9732906
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||  |||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  9732810 gggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 9732906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 620 - 712
Target Start/End: Original strand, 2644968 - 2645063
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||| ||||||||| ||||||| || |||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  2644968 ggtgcgtttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 2645063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 619 - 699
Target Start/End: Original strand, 28824437 - 28824519
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||    
T  28824437 gggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcag 28824519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 621 - 712
Target Start/End: Original strand, 30326214 - 30326308
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| ||||||||| ||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  30326214 gtgcgtttgatttgctaaaaaatgaaggacaggacagagcaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 30326308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 16177762 - 16177859
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttc-agtacaggataaact 712  Q
    |||||| ||||||||| ||||||||| ||||| |||||| |||||||| | |||||||||||||||||||| |||||||||| |||||||||||||||    
T  16177762 agggtgtgtttgatttgctaaaaaatgaaggatatgacataacaactccaattgtccagtgtttgatttgtaaaactgtttcaagtacaggataaact 16177859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 33366821 - 33366724
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||| ||||||||| ||||||||| ||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  33366821 agggtgtgtttgatttgctaaaaaatgaaggatatgacagaacaattctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 33366724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 621 - 699
Target Start/End: Complemental strand, 32498123 - 32498043
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||| ||||||||| |||| |||| ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  32498123 gtgcgtttgatttgctaaaaaatgaagggcatggcagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 32498043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 614 - 699
Target Start/End: Original strand, 32766379 - 32766466
Alignment:
Q  614 actaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||||||| ||||||||  |||||||  ||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  32766379 actaagggtgcgtttgatttgctaaaaaacgaaggacagaacagaacaactataattgtccagtgtttgatttgtaaaactgtttcag 32766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 621 - 712
Target Start/End: Complemental strand, 37308864 - 37308769
Alignment:
Q  621 gtgcgtttgatttactaaaaaa-taaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| |||||||| | ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  37308864 gtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 37308769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 619 - 696
Target Start/End: Complemental strand, 40692507 - 40692428
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgttt 696  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||    
T  40692507 gggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttaatttgtgaaactgttt 40692428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 622 - 712
Target Start/End: Complemental strand, 7259104 - 7259011
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||  |||| |||||||||||||| ||||||||||| |||||||| |||||    
T  7259104 tgcgtttgatttgttaaaaaatgaaggacatgacagaacaactctagctgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaact 7259011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 619 - 687
Target Start/End: Complemental strand, 13829636 - 13829567
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt 687  Q
    |||||||||||||||  |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  13829636 gggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgt 13829567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 620 - 699
Target Start/End: Original strand, 30798370 - 30798450
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||| ||||||||| |||| || ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  30798370 ggtgcgtttgatttgctaaaaaatgaagggca-gacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 30798450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 42365788 - 42365715
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||| ||||||||| ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||    
T  42365788 agggtgtgtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaa 42365715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 621 - 699
Target Start/End: Complemental strand, 2086270 - 2086191
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||| ||||||||| ||||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  2086270 gtgcgtttgatttgctaaaaaatgaaggacaagacag-acaactctagttgtccagtgtttgatttgtaaaactgtttcag 2086191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 626 - 699
Target Start/End: Original strand, 18793180 - 18793255
Alignment:
Q  626 tttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||  ||||||||||||||| ||||||||||||    
T  18793180 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgctcagtgtttgatttgtaaaactgtttcag 18793255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 622 - 699
Target Start/End: Complemental strand, 44284836 - 44284757
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||| ||||||||| ||||||||||||||||||||  | |||| ||||||||||||||| ||||||||||||    
T  44284836 tgcgtttgatttgctaaaaaatgaaggacatgacagaacaactagagttgttcagtgtttgatttgtaaaactgtttcag 44284757  T

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Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 618 - 695
Target Start/End: Complemental strand, 11115081 - 11115003
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaactgtt 695  Q
    |||||| ||||||||| ||||||||| ||||||| |||| |||||||| | ||||||| ||||||||||||||||||||    
T  11115081 agggtgtgtttgatttgctaaaaaatgaaggacaggacaaaacaactccaattgtccaatgtttgatttgtaaactgtt 11115003  T

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Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 621 - 690
Target Start/End: Original strand, 38992953 - 38993023
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||  |||||||| ||||||||||||||| ||||| | |||||||||||||||||||||||    
T  38992953 gtgcgtttgatttgataaaaaatgaaggacatgacagaataactccagttgtccagtgtttgatttgtaaa 38993023  T

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Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 712
Target Start/End: Complemental strand, 35114988 - 35114899
Alignment:
Q  626 tttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||| ||||||||| ||||||| ||||| ||||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||    
T  35114988 tttgatttgctaaaaaatgaaggacaagacaggacaactctagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaact 35114899  T

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Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 639 - 712
Target Start/End: Complemental strand, 42706549 - 42706473
Alignment:
Q  639 aaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  42706549 aaaataaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 42706473  T

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Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 614 - 699
Target Start/End: Complemental strand, 6896383 - 6896296
Alignment:
Q  614 actaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||| |||||||||||||||  |||||||| || |||| ||||||||||| ||  |||||||||||||||||||| ||||||||||||    
T  6896383 actatgggtgcgtttgatttgttaaaaaatgaaagacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcag 6896296  T

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Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 620 - 712
Target Start/End: Complemental strand, 17540924 - 17540829
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttc-agtacaggataaact 712  Q
    ||||||||||||||  |||||||| || || |||||||||||| | || |||||||||||||||||||| |||||||||| ||||||||| |||||    
T  17540924 ggtgcgtttgatttgttaaaaaatgaaagatatgacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaact 17540829  T

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Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 712
Target Start/End: Complemental strand, 39461518 - 39461428
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||| ||||||||| ||||||| || ||||||| | || |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  39461518 gtttgatttgctaaaaaatgaaggacaggatagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 39461428  T

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Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 690
Target Start/End: Original strand, 10399750 - 10399822
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||| ||||||||| ||||||||| |||||||||| |||||||||  | |||| ||||||||||||||||||    
T  10399750 gggtgtgtttgatttgctaaaaaatgaaggacatgatagaacaacttcagttgttcagtgtttgatttgtaaa 10399822  T

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Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 690
Target Start/End: Original strand, 12939202 - 12939270
Alignment:
Q  623 gcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||||||||| ||||| | ||||||||||| ||  |||||||||||||||||| ||||    
T  12939202 gcgtttgatttactaaaaaatgaaggataagacagaacaacttcagttgtccagtgtttgatttataaa 12939270  T

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Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 622 - 699
Target Start/End: Complemental strand, 30713067 - 30712988
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaa-actgtttcag 699  Q
    ||||||||||||  |||||||| || ||||||||| |||||||| | || ||||||||||||||||||| ||||||||||    
T  30713067 tgcgtttgatttgttaaaaaatgaaagacatgacaaaacaactccagttatccagtgtttgatttgtaatactgtttcag 30712988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 617 - 711
Target Start/End: Original strand, 19513566 - 19513664
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaa-taaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaac 711  Q
    |||| ||||||| |||| |||||||| | ||||||| ||||||||||||||| || |||| |||||||||||| ||||||||||| |||||||| ||||    
T  19513566 aaggatgcgtttcatttgctaaaaaaatgaaggacaggacagaacaactctagttttccaatgtttgatttgtaaaactgtttcaggtacaggacaaac 19513664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 5278720 - 5278796
Alignment:
Q  624 cgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||| ||||||||||| ||| |||||||||||||||| |||||   ||||||||||||| ||||||||||||    
T  5278720 cgtttgatttgctaaaaaataa-ggatatgacagaacaactctaattgttaggtgtttgatttgtaaaactgtttcag 5278796  T

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Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 657
Target Start/End: Complemental strand, 1247293 - 1247257
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacag 657  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1247293 gtgcgtttgatttgctaaaaaataaaggacatgacag 1247257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 616 - 690
Target Start/End: Complemental strand, 8112514 - 8112438
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtcca-gtgtttgatttgtaaa 690  Q
    |||||||| |||||||||||||||| |||||| ||||||||  || |||||| ||||| | ||||||||||||||||    
T  8112514 taagggtgtgtttgatttactaaaagataaagaacatgacaatactactctagttgtcaaggtgtttgatttgtaaa 8112438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 690
Target Start/End: Original strand, 26981606 - 26981661
Alignment:
Q  636 taaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||| |||||||  |||||||||||| | |||||||||||||||||||||||    
T  26981606 taaaaaatgaaggacagaacagaacaactccagttgtccagtgtttgatttgtaaa 26981661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 4641721 - 4641642
Alignment:
Q  625 gtttgatttactaaaaaataa---aggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||||| ||   |||| | |||||||||||| || |||| ||||||||||||||| ||||||||||||    
T  4641721 gtttgatttactaaaaaaaaatgaaggaaaagacagaacaactttagttgttcagtgtttgatttgtaaaactgtttcag 4641642  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 699
Target Start/End: Original strand, 38623181 - 38623266
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||| |||||||||  |||||| | |||||||||||| |||||| ||  || |||| |||||||||||| ||||||||||||    
T  38623181 taagggtgtgtttgatttgttaaaaattgaaggacatgacataacaacttcagttatccaatgtttgatttgtaaaactgtttcag 38623266  T

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Target: chr8 (Bit Score: 62; Significance: 2e-26; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 614 - 712
Target Start/End: Complemental strand, 41709992 - 41709891
Alignment:
Q  614 actaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaa 710  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||    
T  41709992 actaagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaa 41709893  T
Q  711 ct 712  Q
    ||    
T  41709892 ct 41709891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 619 - 699
Target Start/End: Complemental strand, 4052690 - 4052608
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  4052690 gggtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 4052608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 617 - 712
Target Start/End: Complemental strand, 34101720 - 34101622
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  34101720 aagggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 34101622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 618 - 743
Target Start/End: Original strand, 32303502 - 32303633
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacagg--ataaact 712  Q
    |||||||||||||||| ||||||||  ||||| |||| ||||||||| || |||| ||||||||||||||| ||||||||||| |||||||  | |||||    
T  32303502 agggtgcgtttgatttgctaaaaaacgaaggaaatgatagaacaactttagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaaaact 32303601  T
Q  713 catatttttgtccctcacc-aaccacaacaca 743  Q
    ||||||||||||||||||| ||||||||||||    
T  32303602 catatttttgtccctcaccaaaccacaacaca 32303633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 616 - 690
Target Start/End: Complemental strand, 34063341 - 34063266
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  34063341 taagagtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaa 34063266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 3251550 - 3251647
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||||||||||||| | ||||||||||| |||||||| |||||    
T  3251550 agggtgcgtttgatttgctaaaaaataaaggataagacagaacaactctagttgtccagtgtttgatttataaaactgtttcaggtacaggacaaact 3251647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 690
Target Start/End: Original strand, 31513477 - 31513550
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||    
T  31513477 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaa 31513550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 37474911 - 37474814
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  37474911 agggtgcgtttgatttgctaaaaaatgaaggatatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 37474814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 38047557 - 38047484
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  38047557 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaa 38047484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 618 - 685
Target Start/End: Original strand, 7394708 - 7394776
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgattt 685  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  7394708 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgattt 7394776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 615 - 712
Target Start/End: Complemental strand, 25478457 - 25478357
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaac 711  Q
    ||||||||||||||||||| ||||||||| ||||||| |||| |||||||||| ||||||||||||| |||||| ||||||||||| |||||||| ||||    
T  25478457 ctaagggtgcgtttgatttgctaaaaaatgaaggacaggacataacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaac 25478358  T
Q  712 t 712  Q
    |    
T  25478357 t 25478357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 30542916 - 30542999
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  30542916 agggtgcgtttgatttgctaaaaaatgaaggacatgacataacaactttagttgtccagtgtttgatttgtaaaactgtttcag 30542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 32019893 - 32019992
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||||| ||||||| | ||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  32019893 taagggtgcgtttgatttgctaaaaattgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 32019992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 10467272 - 10467202
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  10467272 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaa 10467202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 39643094 - 39642997
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| ||  |||||||||||||||||| | ||||||||||| |||||||| |||||    
T  39643094 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttttaaaactgtttcaggtacaggacaaact 39642997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 37664174 - 37664274
Alignment:
Q  616 taagggtgcgtttgatttact-aaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaac 711  Q
    |||||||||||||||||| || ||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||    
T  37664174 taagggtgcgtttgatttgctaaaaaaatgaaggacaggacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 37664273  T
Q  712 t 712  Q
    |    
T  37664274 t 37664274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 7591339 - 7591438
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||| ||| ||||||||| ||||||| ||||||||||| ||  |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  7591339 taagggtgcgtttgttttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 7591438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 12753217 - 12753316
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaa-actgtttca-gtacaggataaact 712  Q
    |||| ||| ||||||||| ||||||||| ||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||| |||||||| |||||    
T  12753217 taagagtgtgtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaagactgtttcaggtacaggacaaact 12753316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 624 - 712
Target Start/End: Complemental strand, 22999463 - 22999372
Alignment:
Q  624 cgtttgatttactaaaaaataaaggacatgacagaacaact-ctattgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||| ||||||||| |||||||||||||||||||| |  |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  22999463 cgtttgatttgctaaaaaatgaaggacatgacagaacaactccggttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 22999372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 37618286 - 37618369
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||| | |||||| ||||||||||||| ||||||||||||    
T  37618286 agggtgcgtttgatttgctagaaaatgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaactgtttcag 37618369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 616 - 712
Target Start/End: Complemental strand, 40389253 - 40389154
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||  ||||||||| ||| ||||| ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  40389253 taagggtatgtttgatttgctagaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 40389154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 27104170 - 27104073
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| |||||||  |||||||||||||| |||| || |||||||||||| ||||||||||| |||||||| |||||    
T  27104170 agggtgcgtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgttcaatgtttgatttgtaaaactgtttcaggtacaggacaaact 27104073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 622 - 690
Target Start/End: Complemental strand, 31732257 - 31732188
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||| ||||||||| ||||||| |||||||||||| || |||||||||||||||||||||||    
T  31732257 tgcgtttgatttgctaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaa 31732188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 622 - 699
Target Start/End: Original strand, 8672953 - 8673032
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||| ||||||||| ||||||| |||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  8672953 tgcgtttgatttgctaaaaaatgaaggacaggacaaaacaactatagttgtccagtgtttgatttgtaaaactgtttcag 8673032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 617 - 712
Target Start/End: Original strand, 29672215 - 29672314
Alignment:
Q  617 aagggtgcgtttgatttacta-aaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||||| ||  |||||| ||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||| |||||    
T  29672215 aagggtgcgtttgatttgctttaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaact 29672314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 614 - 699
Target Start/End: Complemental strand, 30501360 - 30501273
Alignment:
Q  614 actaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||| ||||||||||||||| ||||||||| ||||||||| ||||||||| ||  ||| |||||||||||||||| ||||||||||||    
T  30501360 actatgggtgcgtttgatttgctaaaaaatgaaggacatggcagaacaacttcagttgcccagtgtttgatttgtaaaactgtttcag 30501273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 618 - 699
Target Start/End: Complemental strand, 41548829 - 41548746
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||| |||| ||||||||| ||||||| ||||||||||| ||  |||||||||||||||||||| ||||||||||||    
T  41548829 agggtgcgtttaatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcag 41548746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 619 - 699
Target Start/End: Complemental strand, 45446665 - 45446583
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||| ||||||||| ||||| | |||| || ||||||| |||||||||||||||||||| ||||||||||||    
T  45446665 gggtgcgtttgatttgctaaaaaatgaaggataagacaaaataactctagttgtccagtgtttgatttgtaaaactgtttcag 45446583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 619 - 690
Target Start/End: Original strand, 5968759 - 5968831
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||| |||| ||||||||| ||||| | |||| |||||||||| |||||||||||||||||||||||    
T  5968759 gggtgcgtttaatttgctaaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaa 5968831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 619 - 690
Target Start/End: Complemental strand, 17520804 - 17520732
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||| |||| |||| ||||||||| ||||||||||||||||||||| | |||||| ||||||||||||||||    
T  17520804 gggtgtgtttaatttgctaaaaaatgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaa 17520732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 621 - 699
Target Start/End: Original strand, 29610952 - 29611032
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||  |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||| ||||||||||||    
T  29610952 gtgcgtttgatttgttaaaaaatgaaggacatgacagaacaacttcagttgtccaatgtttgatttgtaaaactgtttcag 29611032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 699
Target Start/End: Complemental strand, 6386787 - 6386704
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||| ||||||||| |||||||  ||| ||||||| || |||||||||||||||||| | ||||||||||||    
T  6386787 agggtgcgtttgatttgctaaaaaatgaaggacaaaacataacaactgtagttgtccagtgtttgatttataaaactgtttcag 6386704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 690
Target Start/End: Original strand, 10656587 - 10656653
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgtaaa 690  Q
    ||||||||| ||||||||| ||||||||| ||||||||| || |||||||||| |||||||||||||    
T  10656587 gtttgatttgctaaaaaatgaaggacatgtcagaacaacctcaattgtccagtatttgatttgtaaa 10656653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 619 - 699
Target Start/End: Complemental strand, 21272877 - 21272795
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||| ||||| ||| || |||| || ||||||||| || |||||||||||||||||||| ||||||||||||    
T  21272877 gggtgcgtttgatttgctaaagaatgaatgacacgagagaacaactttagttgtccagtgtttgatttgtaaaactgtttcag 21272795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 15001671 - 15001594
Alignment:
Q  624 cgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||  |||||||| ||||||| ||||||||||| ||  |||||||||||||||||||| ||||||||||||    
T  15001671 cgtttgatttgataaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcag 15001594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 35225873 - 35225800
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||||  |||||||| ||||| | ||||||||||||| | |||||||||||||| ||||||||    
T  35225873 agggtgcgtttgatttgataaaaaatgaaggataggacagaacaactccagttgtccagtgtttggtttgtaaa 35225800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 699
Target Start/End: Original strand, 13406834 - 13406912
Alignment:
Q  623 gcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||| ||||||||| ||||| | | ||||||||||||| ||||| ||||||| |||||| ||||||||||||    
T  13406834 gcgtttgatttgctaaaaaatgaaggatagggcagaacaactctagttgtctagtgtttaatttgtaaaactgtttcag 13406912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 617 - 690
Target Start/End: Original strand, 16485702 - 16485776
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaataaaggacatgacagaacaa-ctctattgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||||  |||| ||| |||||||||| |||||||  ||  |||||||||||||||||||||||    
T  16485702 aagggtgcgtttgatttgataaagaatgaaggacatgatagaacaatttcagttgtccagtgtttgatttgtaaa 16485776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 621 - 712
Target Start/End: Complemental strand, 17805899 - 17805805
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttc-agtacaggataaact 712  Q
    |||||||| ||||  | |||||| |||||||| ||||| |||||||| |||| ||||||||||||||| |||||||||| ||||||||| |||||    
T  17805899 gtgcgtttaatttgtttaaaaatgaaggacataacagaccaactctaattgttcagtgtttgatttgtaaaactgtttcaagtacaggacaaact 17805805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 699
Target Start/End: Complemental strand, 45114263 - 45114183
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaact-ctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||| |||||| || ||||||| ||||  |||||| | ||||| ||||||||||||||| ||||||||||||    
T  45114263 gtgcgtttgatttgctaaaacatgaaggacaggacatgacaacttcaattgttcagtgtttgatttgtaaaactgtttcag 45114183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 610 - 712
Target Start/End: Complemental strand, 2135290 - 2135185
Alignment:
Q  610 agagactaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacagga 706  Q
    ||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  2135290 agagactcagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacagga 2135191  T
Q  707 taaact 712  Q
     |||||    
T  2135190 caaact 2135185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 619 - 712
Target Start/End: Complemental strand, 20255255 - 20255159
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  20255255 gggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 20255159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 618 - 699
Target Start/End: Complemental strand, 5442491 - 5442408
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa-ctgtttcag 699  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  5442491 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaagctgtttcag 5442408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 620 - 712
Target Start/End: Original strand, 51259655 - 51259750
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  51259655 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 51259750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 621 - 712
Target Start/End: Complemental strand, 29585084 - 29584990
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  29585084 gtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 29584990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 31882895 - 31882992
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  31882895 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 31882992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 616 - 699
Target Start/End: Complemental strand, 40094717 - 40094632
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  40094717 taagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 40094632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 619 - 699
Target Start/End: Original strand, 21221235 - 21221317
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | |||||||||| ||||||||||||    
T  21221235 gggtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccaatatttgatttgtaaaactgtttcag 21221317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 43175687 - 43175614
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||    
T  43175687 agggtgcgtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgtccagtgtttgatttgtaaa 43175614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 690
Target Start/End: Original strand, 3695181 - 3695253
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||| ||||||||| ||||||| |||| |||||||||| |||||||||||||||||||||||    
T  3695181 gggtgcgtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaa 3695253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 12349045 - 12349141
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||| |||| |||||||| | |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  12349045 gggtgcgtttgatttgctaaaaaatgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 12349141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 615 - 712
Target Start/End: Complemental strand, 28676005 - 28675905
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaac 711  Q
    |||||||||||||||||||  |||||||| ||| ||| |||||||||| |||| |||||||||||||||||||| ||||||||||| |||||||| ||||    
T  28676005 ctaagggtgcgtttgatttgttaaaaaatgaagaacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 28675906  T
Q  712 t 712  Q
    |    
T  28675905 t 28675905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 50386330 - 50386426
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||| | ||||| |||||||||||||| ||||||||||| |||||||| |||||    
T  50386330 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaact 50386426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 33364649 - 33364748
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||| ||  ||||||||||||| |||||| ||||||||||| |||||||| |||||    
T  33364649 taagggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaacttcagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaact 33364748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 690
Target Start/End: Original strand, 1344587 - 1344653
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  1344587 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaa 1344653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 613 - 690
Target Start/End: Original strand, 42636271 - 42636349
Alignment:
Q  613 gactaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||| ||||||| |||||||| ||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||||    
T  42636271 gacttagggtgcatttgatttgctaaaaaatgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaa 42636349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 44117148 - 44117078
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| ||||||||| ||||||  ||||||||||||||| |||||||||||||||||||||||    
T  44117148 gtgcgtttgatttgctaaaaaatgaaggactggacagaacaactctagttgtccagtgtttgatttgtaaa 44117078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 620 - 699
Target Start/End: Complemental strand, 24721695 - 24721614
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||| ||||  |||||||| ||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  24721695 ggtgcgtttaatttgttaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcag 24721614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 24571486 - 24571410
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||| ||||||||| ||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  24571486 gtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 24571410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 41682927 - 41683023
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||| |||| |||||| ||  |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  41682927 gggtgcgtttgatttgctaaaaaatgaaggacaggacaaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 41683023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 712
Target Start/End: Original strand, 25860312 - 25860391
Alignment:
Q  636 taaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  25860312 taaaaaatgaaggacttgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 25860391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 616 - 690
Target Start/End: Original strand, 53557666 - 53557741
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||| |||||||| ||||||||||||||| |||||||| |||||||| |||| || |||||||||||||||    
T  53557666 taagggtgcatttgatttgctaaaaaataaaggatatgacagagcaactctagttgttcaatgtttgatttgtaaa 53557741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 619 - 699
Target Start/End: Original strand, 3867523 - 3867605
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||  |||||||| ||||||| ||||||||||||| | |||||| ||||||||||||| ||||||||||||    
T  3867523 gggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaactccagttgtccggtgtttgatttgtaaaactgtttcag 3867605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 618 - 690
Target Start/End: Original strand, 22484616 - 22484689
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaact-ctattgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||||  |||||||| ||||||| |||||||||||| | ||||||||||| ||||||||||||    
T  22484616 agggtgcgtttgatttgataaaaaatgaaggacaggacagaacaactccaattgtccagtgattgatttgtaaa 22484689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 619 - 698
Target Start/End: Original strand, 25927201 - 25927282
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca 698  Q
    ||||||||||||||| ||||||||| | ||||| ||||||||||||||| ||||| | |||||||||||| |||||||||||    
T  25927201 gggtgcgtttgatttgctaaaaaatgatggacaggacagaacaactctagttgtctaatgtttgatttgtaaaactgtttca 25927282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 616 - 699
Target Start/End: Original strand, 39052709 - 39052794
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||| |||||||||||| ||||||||| || |||| |||| |||||||||| ||||| |||||||||||||| ||||||||||||    
T  39052709 taaggatgcgtttgatttgctaaaaaatgaaagacaagacaaaacaactctagttgtctagtgtttgatttgtaaaactgtttcag 39052794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 619 - 690
Target Start/End: Complemental strand, 38213565 - 38213493
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||| |||| ||||||||| || |||| || |||||||||||| |||||||||||||||||||||||    
T  38213565 gggtgcgttttatttgctaaaaaatgaaagacaggatagaacaactctagttgtccagtgtttgatttgtaaa 38213493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 617 - 699
Target Start/End: Original strand, 51925080 - 51925164
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||||| ||| ||||| ||||| | ||||||||||||| | ||||||||||||| |||||| ||||||||||||    
T  51925080 aagggtgcgtttgatttgctagaaaatgaaggataggacagaacaactccagttgtccagtgtttaatttgtaaaactgtttcag 51925164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 630 - 699
Target Start/End: Complemental strand, 34026867 - 34026796
Alignment:
Q  630 atttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||| ||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  34026867 atttgctaaaaaatgaaggacaggacagaacaactctatttgttcagtgtttgatttgtaaaactgtttcag 34026796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 6179638 - 6179565
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||||  |||||||| ||||||| || | |||||||| | |||||||||||||||||||||||    
T  6179638 agggtgcgtttgattttataaaaaatgaaggacaggataaaacaactccagttgtccagtgtttgatttgtaaa 6179565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 712
Target Start/End: Complemental strand, 50679009 - 50678913
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttg-taaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||| ||| |||| ||||| || | |||||||||||||||||||  ||||||||||| |||||||| |||||    
T  50679009 gggtgcgtttgatttgctaaaaaatgaagtacaagacataacaattcaagttgtccagtgtttgatttgaaaaactgtttcaggtacaggacaaact 50678913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 618 - 710
Target Start/End: Original strand, 45690779 - 45690874
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttg-taaactgtttca-gtacaggataaa 710  Q
    |||||||||||||||| ||| ||| | ||||||| || |||||||| ||  |||||||||||||||||||  ||||||||||| ||||||||||||    
T  45690779 agggtgcgtttgatttgctataaagtgaaggacaggatagaacaacttcagttgtccagtgtttgatttgcaaaactgtttcaggtacaggataaa 45690874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 620 - 712
Target Start/End: Complemental strand, 51296789 - 51296696
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||| ||||||| ||||| |||  |||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||| |||||    
T  51296789 ggtgcgtttgatttgctaaaaa-taaag-acagaacagaacaactctaattgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaact 51296696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 622 - 698
Target Start/End: Complemental strand, 3964496 - 3964418
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca 698  Q
    ||||||||||||  |||||||| ||||| | ||||||||||||  | |||||||||||||||||||| |||||||||||    
T  3964496 tgcgtttgatttgataaaaaatgaaggataggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttca 3964418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 712
Target Start/End: Original strand, 20609548 - 20609618
Alignment:
Q  645 aaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||| |||||    
T  20609548 aaggacaggacagaacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaact 20609618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 621 - 690
Target Start/End: Original strand, 47958308 - 47958378
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| ||||||||  | |||||  | |||||||||||| |||||||||||||||||||||||    
T  47958308 gtgcgtttgatttgctaaaaaacgatggacagtatagaacaactctagttgtccagtgtttgatttgtaaa 47958378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 3864550 - 3864631
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||| |||| ||||||||| |  |||| |||||||||||| || |||||| ||||||||||||| ||||||||||||    
T  3864550 agggtgcgtttcatttgctaaaaaatga--gacaggacagaacaactttagttgtccggtgtttgatttgtaaaactgtttcag 3864631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 690
Target Start/End: Complemental strand, 29646277 - 29646205
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||| |||||||| ||||||||| ||||||| |||| ||||| || | |||| ||||||||||||||||||    
T  29646277 gggtgcatttgattttctaaaaaatgaaggacaagacaaaacaattccagttgttcagtgtttgatttgtaaa 29646205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 49748785 - 49748881
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||| ||||| ||||| | || |||||||||| | ||||  |||||||||||||| ||||||||||| |||||||| |||||    
T  49748785 gggtgcgtttgatttgctagaaaatgaaggataggatagaacaactcaagttgtttagtgtttgatttgtaaaactgtttcaggtacaggacaaact 49748881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 620 - 690
Target Start/End: Original strand, 4851338 - 4851404
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||  |||||||| |||||||     ||||||||||| |||||||||||||||||||||||    
T  4851338 ggtgcgtttgatttgttaaaaaatgaaggaca-----gaacaactctagttgtccagtgtttgatttgtaaa 4851404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 699
Target Start/End: Original strand, 54622678 - 54622753
Alignment:
Q  626 tttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||| ||||||||| |||||||||||| |||||| ||  |||||| || |||||||||| ||||||||||||    
T  54622678 tttgatttgctaaaaaatgaaggacatgacaaaacaacttcagttgtccggtatttgatttgtaaaactgtttcag 54622753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 617 - 712
Target Start/End: Complemental strand, 21374143 - 21374045
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||| ||||| ||| ||||||||| ||| | |||||| |||||||  | ||||| |||||||||||||| ||||||||||| |||||||| |||||    
T  21374143 aagggtgtgtttggtttgctaaaaaatgaagaaaatgacataacaacttcagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaact 21374045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 620 - 712
Target Start/End: Original strand, 35387267 - 35387362
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  35387267 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 35387362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 622 - 729
Target Start/End: Complemental strand, 38663323 - 38663213
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttc-agtacaggataaactcatatt 718  Q
    |||||||||||| ||||||||| ||||||| ||||||||||||| | |||||||||||||||||||| |||||||||| || ||||||||||||  ||||    
T  38663323 tgcgtttgatttgctaaaaaatgaaggacaagacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaaggacaggataaactggtatt 38663224  T
Q  719 tttgtccctca 729  Q
    |||||||||||    
T  38663223 tttgtccctca 38663213  T

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Target: chr1; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 844678 - 844775
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  844678 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 844775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 620 - 712
Target Start/End: Original strand, 1351391 - 1351486
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  1351391 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 1351486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 621 - 712
Target Start/End: Original strand, 6711003 - 6711097
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  6711003 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 6711097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 619 - 699
Target Start/End: Original strand, 24339593 - 24339675
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgta-aactgtttcag 699  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  24339593 gggtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgttcagtgtttgatttgtataactgtttcag 24339675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 616 - 688
Target Start/End: Original strand, 26764747 - 26764820
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgta 688  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||| | |||||||||||||||||||||    
T  26764747 taagggtgcgtttgatttgctaaaaaataaaagacatgacagaacaactccagttgtccagtgtttgatttgta 26764820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 620 - 699
Target Start/End: Original strand, 32289300 - 32289381
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  32289300 ggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 32289381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 50304871 - 50304774
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  50304871 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 50304774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 51703118 - 51703215
Alignment:
Q  619 gggtgcgtttgattt-actaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttc-agtacaggataaact 712  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  51703118 gggtgcgtttgatttgactaaaaaatgaaggacaagacagaacaactctaattgtccagtgtttgatttgtaaaattgtttcaagtacaggataaact 51703215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 26118170 - 26118266
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||| |||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  26118170 gggtgcgtatgatttgctaaaaaatgaaggacatgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 26118266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 42512725 - 42512821
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| ||  |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  42512725 gggtgcgtttgatttgctaaaaaataaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 42512821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 619 - 712
Target Start/End: Complemental strand, 51264714 - 51264618
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  51264714 gggtgcgtttgatttgctaaaaaatgaaggacaagacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 51264618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 619 - 699
Target Start/End: Original strand, 49303309 - 49303391
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||| ||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  49303309 gggtgcgtttgatttgctaaaaaataaagtacaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttcag 49303391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 41973131 - 41973034
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag-tacaggataaact 712  Q
    |||||| ||||||||| ||||||||| ||||||| || |||||||||||| |||||||||||||||||||| |||||||||||| ||||||| |||||    
T  41973131 agggtgagtttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaact 41973034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 712
Target Start/End: Complemental strand, 31004351 - 31004255
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||| ||  |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  31004351 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 31004255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 32270566 - 32270490
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  32270566 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 32270490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 712
Target Start/End: Complemental strand, 42510744 - 42510648
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||| ||||| ||||||||| ||||||||||||||||| || ||||||||||| |||||||| |||||    
T  42510744 gggtgcgtttgatttgctaaaaaatgaaggacaggacaggacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaact 42510648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 45490830 - 45490926
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttc-agtacaggataaact 712  Q
    ||||||||||||||| ||||||||| || |||| |||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||| |||||    
T  45490830 gggtgcgtttgatttgctaaaaaatgaaagacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaact 45490926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 621 - 712
Target Start/End: Original strand, 41967805 - 41967900
Alignment:
Q  621 gtgcgtttgattt-actaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  41967805 gtgcgtttgatttgactaaaaaatgaaggacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaact 41967900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 46155125 - 46155054
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgtaaa 690  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  46155125 ggtgtgtttgatttgctaaaaaatgaaggacatgacagaacaactctaattgttcagtgtttgatttgtaaa 46155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 618 - 698
Target Start/End: Original strand, 15539844 - 15539926
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca 698  Q
    ||||||||||||||||  |||||||| ||||||| ||||||||||||| | |||||||||||||||||||| |||||||||||    
T  15539844 agggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttca 15539926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 621 - 712
Target Start/End: Original strand, 17327606 - 17327700
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| ||||||||| ||||||| |||| |||||||||| ||||||||||||| |||||| ||||||||||| |||||||| |||||    
T  17327606 gtgcgtttgatttgctaaaaaatgaaggacaagacaaaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaact 17327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 615 - 699
Target Start/End: Complemental strand, 17888171 - 17888085
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||| |||||||| ||||||||| || ||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||    
T  17888171 ctaagggtgcatttgatttgctaaaaaatgaatgacatgacaaaacaactctagttgtccggtgtttgatttgtaaaactgtttcag 17888085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 617 - 690
Target Start/End: Complemental strand, 21071835 - 21071761
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||||| ||||| ||| ||| ||||||||||||||| || ||||||||||||||||||||||||    
T  21071835 aagggtgcgtttgatttgctaaagaatgaagtacatgacagaacaacttcaattgtccagtgtttgatttgtaaa 21071761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 616 - 699
Target Start/End: Original strand, 28340256 - 28340340
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||| |||||||||||| ||||||||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||    
T  28340256 taaggatgcgtttgatttgctaaaaaataa-ggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 28340340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 616 - 690
Target Start/End: Complemental strand, 8839119 - 8839044
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaact-ctattgtccagtgtttgatttgtaaa 690  Q
    |||| ||||||||||||| ||||||||| ||||||| |||||||||||| | |||||||| |||||||||||||||    
T  8839119 taagagtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactccaattgtccaatgtttgatttgtaaa 8839044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 11772586 - 11772669
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||| ||| ||||| ||||||| |||| |||||||| | |||||||||||||||||||| ||||||||||||    
T  11772586 agggtgcgtttgatttgctagaaaatgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttcag 11772669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 42705189 - 42705288
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||||| | ||||||||||| | ||| || ||||||||| ||||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  42705189 taagggtgcgtttgatttgcgaaaaaataaagaatatgtcataacaactctgattgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 42705288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 44737996 - 44738079
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||| ||| ||||||||| || |||| |||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  44737996 agggtgcgtttgttttgctaaaaaatgaaagacaagacagaacaactctaattgtccagtgtttaatttgtaaaactgtttcag 44738079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 621 - 712
Target Start/End: Complemental strand, 16451344 - 16451250
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||  |||||||| ||||||| |||| |||||||||| ||||||| |||||||||||| ||||||||||| |||||||| |||||    
T  16451344 gtgcgtttgatttgttaaaaaatgaaggacaggacataacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaact 16451250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 616 - 699
Target Start/End: Original strand, 30105631 - 30105717
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaa-taaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||| |||||||| |||||||| | ||||||| || |||||||||||| |||||||||||||||||||| ||||||||||||    
T  30105631 taagggtgcttttgatttgctaaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 30105717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 622 - 712
Target Start/End: Complemental strand, 16387069 - 16386977
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||| ||||||||| |||||||||||||||||  |||| |||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  16387069 tgcgtttgattt-ctaaaaaatgaaggacatgacagaacagttctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 16386977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 618 - 690
Target Start/End: Original strand, 40811325 - 40811398
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||| || |||||||| ||||||||| ||||    
T  40811325 agggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactttagttgtccagcgtttgatttataaa 40811398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 615 - 712
Target Start/End: Complemental strand, 45659044 - 45658944
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttc-agtacaggataaac 711  Q
    ||||||||||||||||||| ||| ||||| ||||||| |||| |||||||| | ||||| ||||| |||||||| |||||||||| ||||||||| ||||    
T  45659044 ctaagggtgcgtttgatttgctagaaaatgaaggacaggacaaaacaactccagttgtctagtgtctgatttgtaaaactgtttcaagtacaggacaaac 45658945  T
Q  712 t 712  Q
    |    
T  45658944 t 45658944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 50540561 - 50540491
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| |||||||| ||||||||  ||| |||| ||||| |||||||||||||||||||||||    
T  50540561 gtgcgtttgatttgctaaaaaagaaaggacagaacaaaacagctctagttgtccagtgtttgatttgtaaa 50540491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 626 - 712
Target Start/End: Complemental strand, 16437574 - 16437485
Alignment:
Q  626 tttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag-tacaggataaact 712  Q
    |||||||| ||||||||| |||||||  | |||||||||||| ||||||| |||||||||||| |||||||||||| ||||||| |||||    
T  16437574 tttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccaatgtttgatttgtaaaactgtttcagctacaggacaaact 16437485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 699
Target Start/End: Complemental strand, 5109945 - 5109865
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||| | |||| ||||||||||||||| ||||||||||||    
T  5109945 gtgcgtttgatttgctaaaaaatgaagtgcaggacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcag 5109865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 614 - 699
Target Start/End: Original strand, 6029246 - 6029338
Alignment:
Q  614 actaagggtgcgtttgatttactaaaaaataaaggacatgacag-----aacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||||||||  |||||||| ||||||| |||||     |||||||| | |||||||||||||||||||| ||||||||||||    
T  6029246 actaagggtgcgtttgatttgttaaaaaatgaaggacaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcag 6029338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 1601387 - 1601318
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| ||||||| | ||| |||||||||||||||| || |||| ||||||||||||||||||    
T  1601387 gtgcgtttgatttgctaaaaa-tgaagaacatgacagaacaactttagttgttcagtgtttgatttgtaaa 1601318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 712
Target Start/End: Complemental strand, 12890423 - 12890361
Alignment:
Q  653 gacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttc-agtacaggataaact 712  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||    
T  12890423 gacagaacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggataaact 12890361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 699
Target Start/End: Complemental strand, 16704925 - 16704863
Alignment:
Q  639 aaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||| ||||||||||| || |||||||| |||||||||||| ||||||||||||    
T  16704925 aaaataaaggacaggacagaacaacttcaattgtccaatgtttgatttgtaaaactgtttcag 16704863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 16476109 - 16476206
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||| ||||||||| ||||||||| ||||| | || || |||| | || |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  16476109 agggtgtgtttgatttgctaaaaaatgaaggagaggagaggacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 16476206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 708 - 743
Target Start/End: Original strand, 51703236 - 51703271
Alignment:
Q  708 aaactcatatttttgtccctcaccaaccacaacaca 743  Q
    |||||||||||||||| |||||||||||||||||||    
T  51703236 aaactcatatttttgttcctcaccaaccacaacaca 51703271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 625 - 690
Target Start/End: Original strand, 3414814 - 3414880
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||  ||||| || ||||| |||||| |||||||||| || ||||||||||||||||||||    
T  3414814 gtttgatttgttaaaatatgaaggatatgacaaaacaactctaattatccagtgtttgatttgtaaa 3414880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 618 - 664
Target Start/End: Original strand, 16643186 - 16643232
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaact 664  Q
    |||||||||||||||| ||||||||| |||||||  |||||||||||    
T  16643186 agggtgcgtttgatttgctaaaaaatgaaggacagaacagaacaact 16643232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 712
Target Start/End: Complemental strand, 7184134 - 7184041
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||| ||||||  | || |||| ||||||| |||| || |||||||||||||||| ||| ||||||||||| |||||||| |||||    
T  7184134 tgcgtttgatttgctaaaatttgaaagacaggacagaataactttagttgtccagtgtttgatatgtaaaactgtttcaggtacaggacaaact 7184041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 5e-24; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 11963552 - 11963455
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  11963552 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 11963455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 616 - 690
Target Start/End: Original strand, 7770162 - 7770237
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  7770162 taagggtgcgtttgatttgctaaaaaatgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaa 7770237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 621 - 712
Target Start/End: Original strand, 24181512 - 24181606
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  24181512 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 24181606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 27838959 - 27839042
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||    
T  27838959 agggtgcgtttgatttgttaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcag 27839042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 622 - 698
Target Start/End: Original strand, 31770480 - 31770558
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca 698  Q
    |||||||||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||    
T  31770480 tgcgtttgatttgctaaaaaataaaggacatgacataacaactctagttgttcagtgtttgatttgtaaaactgtttca 31770558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 621 - 712
Target Start/End: Complemental strand, 32528923 - 32528829
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  32528923 gtgcgtttgatttgctaaaaaatgaaggacatgacaggacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 32528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 616 - 699
Target Start/End: Original strand, 4689581 - 4689666
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||    
T  4689581 taagggttcgtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcag 4689666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 8137048 - 8136951
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag-tacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||| | ||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||| |||||    
T  8137048 agggtgcgtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgttttgtaaaactgtttcagatacaggacaaact 8136951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 34795098 - 34795001
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||| | |||||||||| ||||||||||| |||||||| |||||    
T  34795098 agggtgcgtttgatttgttaaaaaatgaaggacatgacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggacaaact 34795001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 35701488 - 35701415
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| ||||||| || |||||||||||| |||||||||||||||||||||||    
T  35701488 agggtgcgtttgatttgctaaaaaatgaaggacaagatagaacaactctagttgtccagtgtttgatttgtaaa 35701415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 41459799 - 41459702
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||  ||| |||||||||| ||||||||||| |||||||| |||||    
T  41459799 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtttagtatttgatttgtaaaactgtttcaggtacaggacaaact 41459702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 3735565 - 3735495
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||    
T  3735565 gtgcgtttgatttgctaaaaaatgaagaacatgacagaacaactccagttgtccagtgtttgatttgtaaa 3735495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 31644657 - 31644559
Alignment:
Q  618 agggtgcgtttgatttact-aaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| || ||||||| ||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  31644657 agggtgcgtttgatttgcttaaaaaatgaaggacgggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 31644559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 621 - 712
Target Start/End: Complemental strand, 39788401 - 39788307
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||  |||||||||||||||| |||||||||| |||| ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  39788401 gtgcgtttgatttgttaaaaaataaaggacaggacagaacaattctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaact 39788307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 619 - 699
Target Start/End: Complemental strand, 39918717 - 39918635
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||| ||||||||| ||||||| ||||  ||||||||| |||||||||||||||||||| ||||||||||||    
T  39918717 gggtgcgtttgatttgctaaaaaatgaaggacaggacaagacaactctagttgtccagtgtttgatttgtaaaactgtttcag 39918635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 2351891 - 2351818
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| ||||||| ||||| ||||||||| |||| ||||||||||||||||||    
T  2351891 agggtgcgtttgatttgctaaaaaatgaaggacaggacaggacaactctagttgttcagtgtttgatttgtaaa 2351818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 620 - 699
Target Start/End: Complemental strand, 29241587 - 29241506
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||| ||||||||| |||| || | ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  29241587 ggtgcgtttgatttgctaaaaaatgaaggccaggccagaacaactctagttgtccagtgtttgatttgtaaaactgtttcag 29241506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 615 - 690
Target Start/End: Complemental strand, 4665045 - 4664969
Alignment:
Q  615 ctaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||||||  | |||||| ||||||||||||||||||||| | || ||||||||||||||||||||    
T  4665045 ctaagggtgcgtttgatttgattaaaaatgaaggacatgacagaacaactccagttatccagtgtttgatttgtaaa 4664969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 7208115 - 7208198
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||| |||||||| ||||||||| |||||||  ||||||||||| || |||||||||||||||||||| ||||||||||||    
T  7208115 agggtgcatttgatttgctaaaaaatgaaggacagaacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcag 7208198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 712
Target Start/End: Original strand, 22493322 - 22493401
Alignment:
Q  636 taaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  22493322 taaaaaatgaaggacaggacagaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggataaact 22493401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 625 - 712
Target Start/End: Complemental strand, 7523376 - 7523286
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||| ||||||||| ||||| | |||||||||| |||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  7523376 gtttgatttgctaaaaaatgaaggataggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 7523286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 619 - 699
Target Start/End: Complemental strand, 40489546 - 40489465
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||| ||||||||||||||| ||||||||||||    
T  40489546 gggtgcgtttgatttgctaaaaaat-aaggacaggacagaataactctaattgttcagtgtttgatttgtaaaactgtttcag 40489465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 31879961 - 31880058
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||| || | |||||||||| |||| |||||||||||| || ||||||||||| |||||||| |||||    
T  31879961 agggtgcgtttgatttgctaaaaaatgaaggacaagatataacaactctagttgttcagtgtttgattagtaaaactgtttcaggtacaggacaaact 31880058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 617 - 699
Target Start/End: Original strand, 18470312 - 18470396
Alignment:
Q  617 aagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||| ||||||||  |||||||| ||||||| ||||||||||||| | || ||||||||||||||||| ||||||||||||    
T  18470312 aagggtgcttttgatttgttaaaaaatgaaggacaagacagaacaactccagttatccagtgtttgatttgtaaaactgtttcag 18470396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 626 - 712
Target Start/End: Original strand, 41790356 - 41790444
Alignment:
Q  626 tttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcagtacaggataaact 712  Q
    |||||||  ||||||||| || |||| |||||||||| | || |||||||||||||||||||| ||||||||||||||||||| |||||    
T  41790356 tttgattcgctaaaaaatgaaagacaggacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcagtacaggacaaact 41790444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 619 - 684
Target Start/End: Original strand, 5571543 - 5571609
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatt 684  Q
    ||||||||||||||| ||||||||| |||||||  ||| |||||||||| |||||||||||||||||    
T  5571543 gggtgcgtttgatttgctaaaaaatgaaggacaaaacaaaacaactctagttgtccagtgtttgatt 5571609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 621 - 712
Target Start/End: Original strand, 23091192 - 23091286
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| ||||||||| || |||| || | ||| |||| | |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  23091192 gtgcgtttgatttgctaaaaaatgaatgacaagatataactactcaagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaact 23091286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 619 - 699
Target Start/End: Original strand, 37148475 - 37148557
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||  |||||||| ||||| ||||||||||||||| | ||||| | |||||||||||| ||||||||||||    
T  37148475 gggtgcgtttgatttgttaaaaaatgaaggatatgacagaacaactccagttgtcaattgtttgatttgtaaaactgtttcag 37148557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 699
Target Start/End: Complemental strand, 5598688 - 5598608
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||||||||||| ||||||||| ||| |||  |||||||||||| | ||||||| |||||||||||| ||||||||||||    
T  5598688 gtgcgtttgatttgctaaaaaatgaagcacagaacagaacaactcaagttgtccaatgtttgatttgtaaaactgtttcag 5598608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 712
Target Start/End: Complemental strand, 553601 - 553511
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttc-agtacaggataaact 712  Q
    ||||||||| ||||||||| ||| | |||||||||||||| | |||||| |||||||||||| | |||||||||| ||||||||| |||||    
T  553601 gtttgatttgctaaaaaatgaagaatatgacagaacaactttaattgtctagtgtttgatttataaaactgtttcaagtacaggacaaact 553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 690
Target Start/End: Original strand, 32092874 - 32092940
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||  |||||||| ||||||| ||||||||||||| | |||| ||||||||||||||||||    
T  32092874 gtttgattttataaaaaatgaaggacaagacagaacaactccagttgtgcagtgtttgatttgtaaa 32092940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 8560868 - 8560964
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag-tacaggataaact 712  Q
    ||||||||||||||| ||||||||  |||||| ||||| |||||| ||  || | ||||||||||||||| |||||||||||| ||||||| |||||    
T  8560868 gggtgcgtttgatttgctaaaaaacgaaggacgtgacataacaacttcagttattcagtgtttgatttgtaaaactgtttcagatacaggacaaact 8560964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 664
Target Start/End: Complemental strand, 40182596 - 40182553
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaact 664  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||    
T  40182596 gtgcgtttgatttgctaaaaaatgaaggaaatgacagaacaact 40182553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 690
Target Start/End: Original strand, 7725702 - 7725767
Alignment:
Q  626 tttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||| ||||||||| ||||||| |||| |||||||  | ||||||||||||||||| |||||    
T  7725702 tttgatttgctaaaaaattaaggacaggacaaaacaacttcagttgtccagtgtttgattagtaaa 7725767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 699
Target Start/End: Complemental strand, 24036442 - 24036358
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgattt-gtaaactgtttcag 699  Q
    ||||| |||||||||||| ||||||||| || |||| |||| ||||| || | |||||||||||||||||| | ||||||||||||    
T  24036442 taaggatgcgtttgatttgctaaaaaatgaa-gacaggacaaaacaattcaagttgtccagtgtttgatttggaaaactgtttcag 24036358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 619 - 712
Target Start/End: Complemental strand, 11382272 - 11382176
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||| |||||    
T  11382272 gggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaact 11382176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 612 - 712
Target Start/End: Complemental strand, 17868052 - 17867949
Alignment:
Q  612 agactaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggata 708  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||| |||||||| |    
T  17868052 agacttagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttcaggtacaggaca 17867953  T
Q  709 aact 712  Q
    ||||    
T  17867952 aact 17867949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 612 - 712
Target Start/End: Complemental strand, 17877835 - 17877732
Alignment:
Q  612 agactaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggata 708  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||| |||||||| |    
T  17877835 agacttagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttcaggtacaggaca 17877736  T
Q  709 aact 712  Q
    ||||    
T  17877735 aact 17877732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 32409768 - 32409867
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||    
T  32409768 taagggtgcgtttgatttgctaaaaaatgaaggacatgacagaataactctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 32409867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 622 - 712
Target Start/End: Original strand, 166845 - 166938
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  166845 tgcgtttgatttgctaaaaaatgaaggatatgacagaacaactctacttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 166938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 622 - 712
Target Start/End: Complemental strand, 3259890 - 3259797
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  3259890 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 3259797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 24203573 - 24203500
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||||||||||||||    
T  24203573 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactatagttgtccagtgtttgatttgtaaa 24203500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 11613709 - 11613792
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||| || |||||||||||||||||||| ||||||||||||    
T  11613709 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcag 11613792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 621 - 712
Target Start/End: Complemental strand, 11212465 - 11212371
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||| ||||||||| ||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  11212465 gtgcgtttgatttgctaaaaaatgaaggacgggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 11212371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 621 - 690
Target Start/End: Original strand, 14807939 - 14808009
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  14807939 gtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaa 14808009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 620 - 688
Target Start/End: Complemental strand, 3290868 - 3290799
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgta 688  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  3290868 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgta 3290799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 712
Target Start/End: Original strand, 15276855 - 15276952
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||| ||||| | |||||||||||| ||||||||||| |||||||| |||||    
T  15276855 agggtgcatttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtctaatgtttgatttgtaaaactgtttcaggtacaggacaaact 15276952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 622 - 712
Target Start/End: Original strand, 3932729 - 3932822
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||| ||||||||| ||||||| |||||||||| |||| |||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  3932729 tgcgtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 3932822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 10960211 - 10960114
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||| |||||||||| ||||||||| ||||| | ||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  10960211 agggtacgtttgatttgctaaaaaatgaaggataggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 10960114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 618 - 690
Target Start/End: Original strand, 15277198 - 15277271
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||| ||||||||| || |||| |||| |||||||||| |||||||||||||||||||||||    
T  15277198 agggtgcgtttgatttgctaaaaaatgaaagacaagacaaaacaactctatttgtccagtgtttgatttgtaaa 15277271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 32860262 - 32860189
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaact-ctattgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||||  |||||||| |||||||||||| ||||||| | ||||||||||||||||||||||||    
T  32860262 agggtgcgtttgatttgataaaaaatgaaggacatgacaaaacaactccaattgtccagtgtttgatttgtaaa 32860189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 616 - 699
Target Start/End: Complemental strand, 34177043 - 34176958
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||   |||||||||||| ||||||||||||    
T  34177043 taagggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtcacttgtttgatttgtaaaactgtttcag 34176958  T

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Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 619 - 712
Target Start/End: Complemental strand, 3379920 - 3379824
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag-tacaggataaact 712  Q
    |||| |||||||||| ||||||||| |||||||||| ||||||||| || |||||||||||||||||| | |||||||||||| ||||||| |||||    
T  3379920 gggtacgtttgatttgctaaaaaatgaaggacatgatagaacaactttagttgtccagtgtttgatttataaaactgtttcagatacaggacaaact 3379824  T

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Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 619 - 690
Target Start/End: Complemental strand, 10485367 - 10485295
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||| ||||||||| ||||||| |||| |||||||| | |||||||||||||||||||||||    
T  10485367 gggtgcgtttgatttgctaaaaaatgaaggacaagacaaaacaactccagttgtccagtgtttgatttgtaaa 10485295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 616 - 690
Target Start/End: Complemental strand, 2615109 - 2615034
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||| || ||||||||| ||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  2615109 taaggatgtgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccactgtttgatttgtaaa 2615034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 616 - 690
Target Start/End: Original strand, 31870013 - 31870088
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||||| ||||||||| ||||||  |||| |||||||| | |||||||||||||||||||||||    
T  31870013 taagggtgcgtttgatttgctaaaaaatgaaggactggacataacaactccagttgtccagtgtttgatttgtaaa 31870088  T

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Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 624 - 712
Target Start/End: Original strand, 10324035 - 10324126
Alignment:
Q  624 cgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||| ||||||||| |||||||  |||||||||||||| |||| |||||||| |||||| ||||||||||| |||||||| |||||    
T  10324035 cgtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgttcagtgtttaatttgtaaaactgtttcaggtacaggacaaact 10324126  T

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Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 624 - 712
Target Start/End: Complemental strand, 11279333 - 11279242
Alignment:
Q  624 cgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttc-agtacaggataaact 712  Q
    |||||||||| ||||||||| || |||  ||||||||||||| | |||||||||||||||||||| |||||||||| ||||||||| |||||    
T  11279333 cgtttgatttgctaaaaaatgaaagacgggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaact 11279242  T

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Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 23636434 - 23636361
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgtaaa 690  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||| ||  |||| ||||||||||||||||||    
T  23636434 agggtacgtttgatttgctaaaaaatgaaggatatgacagaacaacttcagttgttcagtgtttgatttgtaaa 23636361  T

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Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 650 - 712
Target Start/End: Complemental strand, 24242843 - 24242778
Alignment:
Q  650 catgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  24242843 catgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 24242778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 690
Target Start/End: Original strand, 14925136 - 14925208
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||| ||||||||| ||||||| ||||  ||||| ||  |||||||||||||||||||||||    
T  14925136 gggtgcgtttgatttgctaaaaaatgaaggacaggacatgacaacttcagttgtccagtgtttgatttgtaaa 14925208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 11675290 - 11675389
Alignment:
Q  616 taagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||||| ||||||||  || |||| |||| ||||| || | |||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  11675290 taagggtgcgtttgatttgctaaaaaaataaagacaagacaaaacaattccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 11675389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 699
Target Start/End: Original strand, 8177803 - 8177883
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||| ||||||| |||||||||||||||||||| | |||||| || ||| ||| ||||||||||| | ||||||||||||    
T  8177803 gtgcgattgatttgctaaaaaataaaggacatgaaaaaacaacttcaattatccggtgtttgatttataaaactgtttcag 8177883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 712
Target Start/End: Original strand, 14925375 - 14925471
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    ||||||||||||||   |||||||| ||||||| ||||  ||||||  | |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  14925375 gggtgcgtttgattcgttaaaaaatgaaggacaggacatgacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 14925471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 690
Target Start/End: Complemental strand, 18057729 - 18057657
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||||  ||||||||| ||||||| || || ||||| || |||||||| |||||||||||||||    
T  18057729 gggtgcgtttgattcgctaaaaaatgaaggacaggataggacaacttcaattgtccaatgtttgatttgtaaa 18057657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 690
Target Start/End: Complemental strand, 33041472 - 33041404
Alignment:
Q  623 gcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||  |||||||| ||| | | ||||||||||||| | |||||||||||||||||||||||    
T  33041472 gcgtttgatttgttaaaaaatgaagaataggacagaacaactccagttgtccagtgtttgatttgtaaa 33041404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 23786 - 23689
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| |||| || ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  23786 agggtgcgtttgatttgctaaaaaatgaagggcaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 23689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 618 - 712
Target Start/End: Complemental strand, 15383 - 15286
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||||| ||||||||| ||||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  15383 agggtgcgtttgatttgctaaaaaatgaaggacaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 15286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 620 - 706
Target Start/End: Complemental strand, 102158 - 102069
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacagga 706  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||    
T  102158 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaaactgtttcatgtacagga 102069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 620 - 712
Target Start/End: Original strand, 15260 - 15355
Alignment:
Q  620 ggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttca-gtacaggataaact 712  Q
    |||||||||||||| ||||||||| ||| |||||| |||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||    
T  15260 ggtgcgtttgatttgctaaaaaatgaagaacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggataaact 15355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 621 - 690
Target Start/End: Original strand, 4467 - 4537
Alignment:
Q  621 gtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  4467 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaa 4537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 619 - 690
Target Start/End: Original strand, 13573 - 13645
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgtaaa 690  Q
    |||||||||||||||  |||||||| ||||||| ||||||||||||| | |||||||||||||||||||||||    
T  13573 gggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaa 13645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 614 - 699
Target Start/End: Original strand, 2377 - 2464
Alignment:
Q  614 actaagggtgcgtttgatttactaaaaaataaaggacatgacagaacaactcta-ttgtccagtgtttgatttgt-aaactgtttcag 699  Q
    ||||| |||||||||||||| ||||||| | ||||||| |||| |||||||||| |||| ||||||||||||||| ||||||||||||    
T  2377 actaaaggtgcgtttgatttgctaaaaattgaaggacaagacataacaactctagttgttcagtgtttgatttgtaaaactgtttcag 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 618 - 699
Target Start/End: Original strand, 2224 - 2306
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||| ||||||||| ||||||| || ||||||||| || | | ||||||||||||||| ||||||||||||    
T  2224 agggtgcgtttgatttgctaaaaaatgaaggacaggatagaacaactttagttttcagtgtttgatttgtaaaactgtttcag 2306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 619 - 699
Target Start/End: Complemental strand, 51648 - 51566
Alignment:
Q  619 gggtgcgtttgatttactaaaaaataaaggacatgacagaacaactct-attgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||||||||  |||||||| |||||||  ||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  51648 gggtgcgtttgatttgataaaaaatgaaggacaaaacagaacaactttaattgtccagtgtttgatttgtaaaactgtttcag 51566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 42843 - 42918
Alignment:
Q  625 gtttgatttactaaaaaataaaggacatgacagaacaactctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||||  |||||||| ||||| | ||||||||||||| || |||||||||||||||||| ||||||||||||    
T  42843 gtttgatttgttaaaaaatgaaggataagacagaacaactccatagtccagtgtttgatttgtaaaactgtttcag 42918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 618 - 690
Target Start/End: Original strand, 18977 - 19050
Alignment:
Q  618 agggtgcgtttgatttactaaaaaataaaggacatgacagaacaactctatt-gtccagtgtttgatttgtaaa 690  Q
    ||||||| ||| |||| ||||||||| ||||||| |||||||||| | |||| |||||||||||||||||||||    
T  18977 agggtgcctttaatttgctaaaaaatgaaggacaggacagaacaattatatttgtccagtgtttgatttgtaaa 19050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 626 - 699
Target Start/End: Original strand, 5332 - 5407
Alignment:
Q  626 tttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttcag 699  Q
    |||||||| ||||||||| |||||||  |||||||||| ||  |||||||||||||||||||| ||||||||||||    
T  5332 tttgatttgctaaaaaatgaaggacagaacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcag 5407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 622 - 698
Target Start/End: Original strand, 1532 - 1610
Alignment:
Q  622 tgcgtttgatttactaaaaaataaaggacatgacagaacaac-tctattgtccagtgtttgatttgt-aaactgtttca 698  Q
    ||||||||||||  |||||||| |||||||  |||||||||| ||  || ||||||||||||||||| |||||||||||    
T  1532 tgcgtttgatttgttaaaaaatgaaggacaaaacagaacaacttcagttctccagtgtttgatttgtaaaactgtttca 1610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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