View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14820_high_15 (Length: 238)
Name: NF14820_high_15
Description: NF14820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14820_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 26484863 - 26484647
Alignment:
| Q |
5 |
ttcagcatgcattctaaaataatttatggctgtgttgtgattcgcgatactgtggataatcgcggtcaaatgttgactcataagctttaattacggtcaa |
104 |
Q |
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| T |
26484863 |
ttcagcatgcattctaaaataatttatggctgtgttgtgattcgcgatactgtggataatcgcggtcaaatgttgactcataagctttaattacggtcaa |
26484764 |
T |
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| Q |
105 |
atgtagctgatacaaccttaaatttctacaacttgcattgtccttacctctttggcaaacaattcatcaatgttgaagtcaagtcttgggtttacagctg |
204 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26484763 |
atgtagctgatacagccttaaatttctacaacttgcattgtccttacctctttggcaaacaattcatcaatgttgaagtcaagtcttgggtttacagctg |
26484664 |
T |
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| Q |
205 |
ctaatttcattgacaag |
221 |
Q |
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||||||||||||||||| |
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| T |
26484663 |
ctaatttcattgacaag |
26484647 |
T |
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