View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14820_low_18 (Length: 246)

Name: NF14820_low_18
Description: NF14820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14820_low_18
NF14820_low_18
[»] chr4 (51 HSPs)
chr4 (29-227)||(54655190-54655388)
chr4 (9-197)||(14054771-14054977)
chr4 (105-197)||(43781479-43781571)
chr4 (105-197)||(46830029-46830121)
chr4 (105-197)||(28987052-28987144)
chr4 (105-197)||(41866188-41866280)
chr4 (102-197)||(9893742-9893837)
chr4 (105-197)||(6138580-6138672)
chr4 (105-197)||(30842165-30842257)
chr4 (105-197)||(39636819-39636911)
chr4 (105-197)||(48550251-48550343)
chr4 (105-197)||(54150560-54150652)
chr4 (105-197)||(54153078-54153170)
chr4 (107-197)||(32238019-32238109)
chr4 (105-197)||(13167559-13167651)
chr4 (105-197)||(19592191-19592283)
chr4 (105-197)||(26651808-26651900)
chr4 (109-197)||(43772083-43772171)
chr4 (105-197)||(46926082-46926174)
chr4 (113-197)||(53532019-53532103)
chr4 (105-197)||(54488639-54488731)
chr4 (107-197)||(9889295-9889385)
chr4 (107-197)||(48908309-48908399)
chr4 (105-194)||(42944861-42944950)
chr4 (105-194)||(48407661-48407750)
chr4 (105-177)||(6505235-6505307)
chr4 (105-197)||(15603394-15603486)
chr4 (105-197)||(25312749-25312841)
chr4 (34-81)||(9893656-9893703)
chr4 (134-197)||(14072565-14072628)
chr4 (124-197)||(39187787-39187860)
chr4 (105-174)||(49136556-49136625)
chr4 (105-197)||(14564106-14564198)
chr4 (105-197)||(16566339-16566431)
chr4 (105-197)||(26426075-26426167)
chr4 (105-193)||(29149271-29149359)
chr4 (105-197)||(38306045-38306137)
chr4 (25-81)||(48550153-48550209)
chr4 (105-197)||(51922974-51923066)
chr4 (34-80)||(9889429-9889475)
chr4 (25-79)||(48908075-48908129)
chr4 (108-197)||(49519767-49519859)
chr4 (27-81)||(51922878-51922932)
chr4 (135-173)||(53663036-53663074)
chr4 (105-179)||(55638733-55638807)
chr4 (44-81)||(2175241-2175278)
chr4 (105-158)||(4954050-4954103)
chr4 (105-158)||(15619648-15619701)
chr4 (25-78)||(25312651-25312704)
chr4 (25-78)||(54150462-54150515)
chr4 (125-197)||(13183010-13183082)
[»] chr7 (37 HSPs)
chr7 (9-197)||(39977508-39977714)
chr7 (105-197)||(3622407-3622499)
chr7 (105-197)||(34365929-34366021)
chr7 (105-197)||(37562640-37562732)
chr7 (105-197)||(43631643-43631735)
chr7 (105-202)||(41715727-41715824)
chr7 (105-197)||(39391084-39391176)
chr7 (105-197)||(47217488-47217580)
chr7 (105-194)||(44967349-44967438)
chr7 (105-197)||(3342860-3342952)
chr7 (105-197)||(3375560-3375652)
chr7 (105-185)||(34010409-34010489)
chr7 (105-197)||(42752138-42752230)
chr7 (105-197)||(48134649-48134741)
chr7 (25-79)||(40903250-40903304)
chr7 (105-197)||(10371905-10371997)
chr7 (25-81)||(32186912-32186968)
chr7 (105-197)||(37639500-37639592)
chr7 (105-197)||(38230138-38230230)
chr7 (25-81)||(41715629-41715685)
chr7 (105-197)||(48459780-48459872)
chr7 (105-195)||(32187010-32187100)
chr7 (105-154)||(32205995-32206044)
chr7 (124-197)||(47022008-47022081)
chr7 (105-193)||(9456174-9456262)
chr7 (25-81)||(43581607-43581663)
chr7 (105-173)||(43737910-43737978)
chr7 (134-197)||(19097496-19097559)
chr7 (134-181)||(40903131-40903178)
chr7 (27-81)||(37562544-37562598)
chr7 (107-197)||(46541672-46541762)
chr7 (34-100)||(48134561-48134627)
chr7 (124-197)||(386428-386501)
chr7 (105-158)||(3750756-3750809)
chr7 (44-81)||(47217622-47217659)
chr7 (105-173)||(36920149-36920217)
chr7 (105-197)||(39634112-39634204)
[»] chr2 (44 HSPs)
chr2 (26-100)||(27911367-27911441)
chr2 (105-195)||(42515936-42516026)
chr2 (105-197)||(7472632-7472724)
chr2 (105-197)||(39141428-39141520)
chr2 (105-185)||(31224738-31224818)
chr2 (105-197)||(9988459-9988551)
chr2 (105-197)||(14821220-14821312)
chr2 (105-197)||(36548257-36548349)
chr2 (105-196)||(31562646-31562737)
chr2 (105-197)||(1944997-1945089)
chr2 (105-197)||(2213705-2213797)
chr2 (105-177)||(7296213-7296285)
chr2 (105-197)||(32502043-32502135)
chr2 (25-77)||(38600539-38600591)
chr2 (14-77)||(41580806-41580869)
chr2 (25-74)||(18970386-18970435)
chr2 (27-100)||(42516048-42516121)
chr2 (105-197)||(2213564-2213656)
chr2 (105-197)||(2215310-2215402)
chr2 (105-197)||(8170370-8170462)
chr2 (25-81)||(18511062-18511118)
chr2 (25-81)||(43436373-43436429)
chr2 (105-180)||(44619036-44619111)
chr2 (25-79)||(3602553-3602607)
chr2 (27-100)||(28641604-28641677)
chr2 (44-81)||(36548179-36548216)
chr2 (15-76)||(43858309-43858370)
chr2 (105-197)||(5916200-5916292)
chr2 (149-197)||(27911493-27911541)
chr2 (105-197)||(28127245-28127337)
chr2 (105-197)||(30007511-30007603)
chr2 (105-197)||(34433264-34433356)
chr2 (105-197)||(36312334-36312426)
chr2 (105-173)||(45714650-45714718)
chr2 (34-81)||(8170282-8170329)
chr2 (34-81)||(14821132-14821179)
chr2 (134-197)||(25747840-25747903)
chr2 (39-81)||(2215228-2215270)
chr2 (27-81)||(9988593-9988647)
chr2 (108-173)||(41580692-41580757)
chr2 (44-80)||(15283350-15283386)
chr2 (25-81)||(16467046-16467102)
chr2 (105-197)||(26207887-26207979)
chr2 (105-185)||(28261352-28261432)
[»] chr8 (34 HSPs)
chr8 (105-197)||(42143324-42143416)
chr8 (105-197)||(3467590-3467682)
chr8 (105-197)||(4941741-4941833)
chr8 (105-197)||(22936753-22936845)
chr8 (105-173)||(40742279-40742347)
chr8 (109-202)||(36121500-36121593)
chr8 (105-197)||(26243181-26243273)
chr8 (105-197)||(28425432-28425524)
chr8 (105-197)||(31246275-31246367)
chr8 (106-197)||(27649803-27649894)
chr8 (25-79)||(22552836-22552890)
chr8 (123-197)||(30085599-30085673)
chr8 (105-202)||(25697915-25698012)
chr8 (105-194)||(41289021-41289110)
chr8 (105-197)||(3097166-3097258)
chr8 (105-173)||(25497748-25497816)
chr8 (105-173)||(30759289-30759357)
chr8 (133-197)||(33626994-33627058)
chr8 (105-197)||(38114501-38114593)
chr8 (138-197)||(44926945-44927004)
chr8 (105-197)||(440149-440241)
chr8 (109-197)||(24897548-24897636)
chr8 (105-173)||(44926897-44926965)
chr8 (134-193)||(26125843-26125902)
chr8 (134-197)||(29023309-29023372)
chr8 (25-79)||(3619164-3619218)
chr8 (27-81)||(38152268-38152322)
chr8 (105-158)||(6399107-6399160)
chr8 (134-175)||(22552722-22552763)
chr8 (26-79)||(24297687-24297740)
chr8 (105-158)||(40742181-40742234)
chr8 (113-197)||(36114001-36114085)
chr8 (25-81)||(41289152-41289208)
chr8 (45-81)||(41981136-41981172)
[»] chr6 (13 HSPs)
chr6 (105-197)||(13739254-13739346)
chr6 (105-197)||(13744754-13744846)
chr6 (105-193)||(29409215-29409303)
chr6 (105-197)||(33898965-33899057)
chr6 (105-197)||(6208023-6208115)
chr6 (105-197)||(17829958-17830050)
chr6 (109-173)||(21455933-21455997)
chr6 (131-197)||(699631-699697)
chr6 (123-173)||(7215640-7215690)
chr6 (123-193)||(16121965-16122035)
chr6 (134-195)||(29399755-29399816)
chr6 (105-197)||(1312399-1312491)
chr6 (105-197)||(10826140-10826232)
[»] chr1 (38 HSPs)
chr1 (105-197)||(42850180-42850272)
chr1 (107-197)||(50977301-50977391)
chr1 (105-197)||(13056070-13056162)
chr1 (105-197)||(1199900-1199992)
chr1 (105-197)||(11023291-11023383)
chr1 (105-197)||(25230079-25230171)
chr1 (105-197)||(47123459-47123551)
chr1 (105-197)||(50406203-50406295)
chr1 (105-197)||(5410712-5410804)
chr1 (105-197)||(7826315-7826407)
chr1 (105-197)||(10470662-10470754)
chr1 (105-197)||(26058314-26058406)
chr1 (105-197)||(27801613-27801705)
chr1 (105-197)||(31223447-31223539)
chr1 (105-195)||(45710121-45710211)
chr1 (105-197)||(6166182-6166274)
chr1 (105-197)||(20800238-20800330)
chr1 (25-81)||(26058216-26058272)
chr1 (25-77)||(34718427-34718478)
chr1 (105-197)||(35569163-35569255)
chr1 (105-197)||(43728839-43728931)
chr1 (105-197)||(48510981-48511073)
chr1 (105-184)||(49242956-49243035)
chr1 (27-81)||(31223351-31223405)
chr1 (105-173)||(15884300-15884368)
chr1 (34-81)||(6464592-6464639)
chr1 (34-81)||(45710033-45710080)
chr1 (25-100)||(47123361-47123436)
chr1 (105-195)||(6464680-6464770)
chr1 (50-100)||(9447533-9447583)
chr1 (39-81)||(10470579-10470621)
chr1 (107-197)||(36205266-36205356)
chr1 (108-197)||(12247495-12247584)
chr1 (105-158)||(32365152-32365205)
chr1 (27-79)||(11051407-11051459)
chr1 (105-197)||(13931695-13931786)
chr1 (15-79)||(15884191-15884255)
chr1 (23-79)||(46033210-46033266)
[»] scaffold0983 (1 HSPs)
scaffold0983 (105-195)||(2230-2320)
[»] chr5 (28 HSPs)
chr5 (107-197)||(5710343-5710433)
chr5 (105-197)||(32454599-32454692)
chr5 (105-197)||(9275441-9275533)
chr5 (105-197)||(13253040-13253132)
chr5 (105-197)||(24045893-24045985)
chr5 (105-197)||(40885274-40885366)
chr5 (105-173)||(34106928-34106996)
chr5 (105-197)||(41834955-41835047)
chr5 (102-197)||(7715000-7715095)
chr5 (105-197)||(10058137-10058229)
chr5 (105-197)||(22482252-22482344)
chr5 (105-197)||(32030777-32030869)
chr5 (105-197)||(35760252-35760344)
chr5 (105-197)||(39987924-39988016)
chr5 (105-197)||(40495315-40495407)
chr5 (105-197)||(2483671-2483763)
chr5 (105-197)||(3667917-3668009)
chr5 (105-173)||(7385913-7385981)
chr5 (105-173)||(8049032-8049100)
chr5 (123-203)||(33953853-33953933)
chr5 (105-197)||(42146370-42146462)
chr5 (108-175)||(16158444-16158511)
chr5 (123-193)||(2430258-2430328)
chr5 (39-81)||(41740684-41740726)
chr5 (44-81)||(7714924-7714961)
chr5 (44-81)||(24045815-24045852)
chr5 (105-197)||(27021191-27021283)
chr5 (105-197)||(40791027-40791119)
[»] scaffold0369 (1 HSPs)
scaffold0369 (105-197)||(8498-8590)
[»] chr3 (34 HSPs)
chr3 (105-197)||(15511336-15511428)
chr3 (105-197)||(42318378-42318470)
chr3 (105-197)||(50664807-50664899)
chr3 (105-197)||(53074951-53075043)
chr3 (105-197)||(55154550-55154642)
chr3 (105-197)||(4984630-4984722)
chr3 (105-197)||(38125402-38125494)
chr3 (105-197)||(48189402-48189494)
chr3 (105-197)||(30811492-30811584)
chr3 (105-197)||(38340854-38340946)
chr3 (105-197)||(3348292-3348384)
chr3 (105-197)||(10853227-10853319)
chr3 (105-197)||(23496366-23496458)
chr3 (105-197)||(26519713-26519805)
chr3 (105-197)||(38172267-38172359)
chr3 (105-197)||(52966769-52966861)
chr3 (105-184)||(23207041-23207120)
chr3 (105-183)||(35930787-35930865)
chr3 (27-81)||(38172401-38172455)
chr3 (124-197)||(10334206-10334279)
chr3 (108-173)||(40415280-40415345)
chr3 (105-194)||(42475758-42475847)
chr3 (105-173)||(19877466-19877534)
chr3 (102-158)||(21225036-21225092)
chr3 (105-185)||(35425382-35425462)
chr3 (105-197)||(44939376-44939468)
chr3 (34-81)||(48189535-48189582)
chr3 (25-79)||(37698485-37698539)
chr3 (25-79)||(45423864-45423918)
chr3 (105-197)||(16246056-16246146)
chr3 (44-81)||(32357481-32357518)
chr3 (25-78)||(42475660-42475713)
chr3 (34-79)||(50664719-50664764)
chr3 (105-197)||(8424690-8424782)
[»] scaffold0394 (1 HSPs)
scaffold0394 (105-197)||(5790-5882)
[»] scaffold0217 (1 HSPs)
scaffold0217 (105-185)||(1999-2079)
[»] scaffold0381 (2 HSPs)
scaffold0381 (107-197)||(9161-9251)
scaffold0381 (34-80)||(9071-9117)
[»] scaffold0041 (2 HSPs)
scaffold0041 (25-79)||(46714-46768)
scaffold0041 (134-181)||(46840-46887)
[»] scaffold0007 (1 HSPs)
scaffold0007 (105-197)||(29083-29175)
[»] scaffold0005 (1 HSPs)
scaffold0005 (105-197)||(253177-253269)
[»] scaffold0014 (1 HSPs)
scaffold0014 (105-173)||(118394-118462)


Alignment Details
Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 54655190 - 54655388
Alignment:
Q  29 tggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatcagcttgaaataatcacttttgtatatcaattcacatcaaacacacttt 128  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  54655190 tggtaattaaacatccaaaatcaattttaatttaaagtatccaaacaacatcaacttgaaataatcacttttatatatcaattcacatcaaacacacttt 54655289  T
Q  129 tgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacacaaacaatgactttcaccacacaaaaaacaaa 227  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  54655290 tgactaaaatcaattattttaaactcaattatgtcaaaatcaattatcgtcaccgccgtaccaaacacacacaatgactttcaccacacaaaaaacaaa 54655388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 14054771 - 14054977
Alignment:
Q  9 aatataattaagaccaattttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatcagcttgaaataatcacttttgtat---- 104  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||        
T  14054771 aatataattaagacccattttggtaattagacatccaaaatcaattttaatttaaagtattcaaacaacatcaacttgaaataatcacttttatataagt 14054870  T
Q  105 --------------atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtacc 190  Q
                  ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||  || ||| ||||||||    
T  14054871 ttatccaaacataaatcaattcacatcaaactcacttttgactaaactcaattctttcaaactcaattatgtcaaaatcaattcccgtcactgccgtacc 14054970  T
Q  191 aaacaca 197  Q
    |||||||    
T  14054971 aaacaca 14054977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 43781571 - 43781479
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  43781571 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacaca 43781479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 46830121 - 46830029
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| || |||||||||||  |||||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  46830121 atcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgccataccaaacaca 46830029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 28987052 - 28987144
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || |||||||| |||||||||||    
T  28987052 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccataccaaacaca 28987144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 41866188 - 41866280
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| |||||| |||||||  | |||||||||| | ||||||||||||||||||||||||  ||||||||||    
T  41866188 atcaattcacatccaactcacttttaactaaactcaattccctcaaactcaattttatcaaaatcaattatcgccaccgccaaaccaaacaca 41866280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 9893742 - 9893837
Alignment:
Q  102 tatatcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||| ||| ||| |||||||||| |||||||||||| | ||| |||||| | |||||||||||| || |||||||| |||||||||||    
T  9893742 tatatcaattcatatctaactcacttttgacaaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgccataccaaacaca 9893837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 6138672 - 6138580
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| || |||||||||| ||| |||||||||| | |||||||||||| || ||||||||  ||||||||||    
T  6138672 atcaattcacatccaactcacttttaaccaaaatcaattatttcaaactcaattctatcaaaatcaattctccccaccgccaaaccaaacaca 6138580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 30842165 - 30842257
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| ||| ||||||| |||||||||||    
T  30842165 atcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcaccgccataccaaacaca 30842257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 39636819 - 39636911
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| ||||||||| | |||||||||||    
T  39636819 atcaattcacatccaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgtcataccaaacaca 39636911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 48550251 - 48550343
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||| ||| ||||||| |  |||||||||||| ||||| |||||| | |||||||||||| ||||||||||| |||||||||||    
T  48550251 atcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaaacaca 48550343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 54150560 - 54150652
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| | ||||||||| |||||||||||    
T  54150560 atcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattcttgccaccgccataccaaacaca 54150652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 54153078 - 54153170
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||  | |||||||||||| | |||||||||||||||||||||  |||||||||||    
T  54153078 atcaattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattatattaaaatcaattatcgccaccgctataccaaacaca 54153170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 32238109 - 32238019
Alignment:
Q  107 caattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||  ||| ||||||| || |||||||||||  | |||||||||| | |||||||||||||||||||||||  |||||||||||    
T  32238109 caattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattctatcaaaatcaattatcgccaccgctataccaaacaca 32238019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 13167559 - 13167651
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||||| |||||||||||| |  | |||||| |||||||||||    
T  13167559 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaatttttcctaccgccataccaaacaca 13167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 19592283 - 19592191
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| || ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || |||||||| || ||||||||    
T  19592283 atcaattcacttccaactcacttttaaccaaaatcaattctctaaaactcaattctatcaaaatcaattctccccaccgccatatcaaacaca 19592191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 26651900 - 26651808
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | ||||| |||| | |||||||||||| ||||| ||||| |||||||||||    
T  26651900 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattctcgccgccgccataccaaacaca 26651808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 43772171 - 43772083
Alignment:
Q  109 attcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||||||| |||| ||  ||||||||||    
T  43772171 attcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatcgtcaccaccaaaccaaacaca 43772083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 46926082 - 46926174
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| || |||| ||||| | | |||||||||| | ||||||||||||||| |||||| ||||| |||||||    
T  46926082 atcaattcacatctaactcacttttaaccaaaaacaattttctcaaactcaattctatcaaaatcaattatccccaccgtcgtacgaaacaca 46926174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 53532019 - 53532103
Alignment:
Q  113 acatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||| ||| ||||||| ||||||||||||| | | |||||||||| | |||||||||||| || ||||||||| ||||||||||    
T  53532019 acatccaactcacttttaactaaaatcaattatgtcaaactcaattttatcaaaatcaattctcaccaccgccgaaccaaacaca 53532103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 54488639 - 54488731
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || ||||||||||||   ||| |||||| ||||||||||||||||| ||||||| | ||||||||||    
T  54488639 atcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgcagaaccaaacaca 54488731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 9889385 - 9889295
Alignment:
Q  107 caattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||| ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || |||||||| |||||||||||    
T  9889385 caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgccataccaaacaca 9889295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 48908309 - 48908399
Alignment:
Q  107 caattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||| ||||||| || |||||||||||| | ||||||||| || | |||||||||| || || |||||  ||||||||||    
T  48908309 caattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaataatattaaaatcaattttcaccgccgccaaaccaaacaca 48908399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 42944950 - 42944861
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaac 194  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | ||| |||||| | ||||||| |||| | ||||||||||||||||||    
T  42944950 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaataaattcttgccaccgccgtaccaaac 42944861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 48407750 - 48407661
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaac 194  Q
    |||||||||| |||||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| ||| || |||| | ||||||    
T  48407750 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcagcgccattccaaac 48407661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 6505235 - 6505307
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcg 177  Q
    ||||||||||||||||| || |||| || |||||||||||| | |||||||||| | ||||| ||||||||||    
T  6505235 atcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaattctatcaaagtcaattatcg 6505307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 15603394 - 15603486
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||||| ||||||| || | |||||||| | | |||||||||| | |||||||||||| || |||||| |  ||||||||||    
T  15603394 atcaattcacatcaaactcactttttaccataatcaattatctcaaactcaattctatcaaaatcaattctccccaccgtcaaaccaaacaca 15603486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 25312749 - 25312841
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| |||  ||||||  ||||||||||    
T  25312749 atcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgttaccgccaaaccaaacaca 25312841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 9893656 - 9893703
Alignment:
Q  34 attagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  9893656 attatacattcaaaatcaattttaatttaaactatccaaacaacatca 9893703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 14072565 - 14072628
Alignment:
Q  134 aaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||| | |||||||||| | |||||||||||| || |||||||| |||||||||||    
T  14072565 aaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgccataccaaacaca 14072628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 39187787 - 39187860
Alignment:
Q  124 acttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||| || |||||||||||| | |||||||||| | |||||||||||| || ||||||||  ||||||||||    
T  39187787 acttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccgccaaaccaaacaca 39187860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 49136556 - 49136625
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatta 174  Q
    ||||||||||||||||| ||||||| || | |||||||||| | ||||||||||||  || |||||||||    
T  49136556 atcaattcacatcaaactcacttttaaccataatcaattctctcaaactcaattataccagaatcaatta 49136625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 14564198 - 14564106
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||| ||| ||| ||| || |||||||||||| | |||||||||| | |||||||||||| || || |||||  ||||||||||    
T  14564198 atcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccgccgcccaaccaaacaca 14564106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 16566339 - 16566431
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || |  | ||| |||||||||||    
T  16566339 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccctgctgccataccaaacaca 16566431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 26426167 - 26426075
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| | ||| ||| ||||||| || |||||||||| | | |||||||||| | |||||||||||| || |||||| | |||||||||||    
T  26426167 atcaatttatatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctccccaccgtcataccaaacaca 26426075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 29149359 - 29149271
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaa 193  Q
    ||||||||||||  ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || |||||||  |||||||    
T  29149359 atcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaa 29149271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 38306045 - 38306137
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||| |||  ||| ||||||| || ||||||||||||   ||| |||||| ||||||||||||||||| ||||||  | ||||||||||    
T  38306045 atcaattcgcattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgtagaaccaaacaca 38306137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 48550153 - 48550209
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||| |||||||||||||||||  ||  ||||||||||| ||||    
T  48550153 attttggtaattagacacccaaaatcaattttaatccaatctatccaaacaatatca 48550209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 51922974 - 51923066
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||  ||| ||||||| || |||||||||||| | |||||||||| |  ||||||||||| ||| | ||||| |||||||||||    
T  51922974 atcaattcagattcaactcacttttaaccaaaatcaattctctcaaactcaattctaacaaaatcaattctcgtcgccgccataccaaacaca 51923066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 9889475 - 9889429
Alignment:
Q  34 attagacatccaaaatcaattttaatttaaagtatccaaacaacatc 80  Q
    |||| |||| ||||||||||||||||| ||| |||||||||||||||    
T  9889475 attatacattcaaaatcaattttaattcaaactatccaaacaacatc 9889429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 48908075 - 48908129
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    ||||||||||||  ||||| |||||||||||| || |||| ||||||||||||||    
T  48908075 attttggtaatttaacatctaaaatcaattttgatgtaaattatccaaacaacat 48908129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 49519767 - 49519859
Alignment:
Q  108 aattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccg---taccaaacaca 197  Q
    |||||||||| ||| ||||||| || |||||||||||| | |||||||||| | |||||| ||||| || ||||| |||   |||||||||||    
T  49519767 aattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaaccaattctcaccaccaccgccataccaaacaca 49519859  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 51922878 - 51922932
Alignment:
Q  27 tttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||||| |||| |||| ||||||||||||| ||| ||| ||||||||||||||||    
T  51922878 tttggtcattatacattcaaaatcaattttgattcaaactatccaaacaacatca 51922932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 53663074 - 53663036
Alignment:
Q  135 aaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  53663074 aaatcaattcttttaaaatcaattatgtcataatcaatt 53663036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 55638807 - 55638733
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgcc 179  Q
    ||||||| ||||  ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| |||||    
T  55638807 atcaatttacatttaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattctcgcc 55638733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 2175278 - 2175241
Alignment:
Q  44 caaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  2175278 caaaatcaattttaattcaaactatccaaacaacatca 2175241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 4954103 - 4954050
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaatt 158  Q
    ||||||||||||||||| ||||||| || |||||||||||| | ||| ||||||    
T  4954103 atcaattcacatcaaactcacttttaaccaaaatcaattctctcaaaatcaatt 4954050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 15619648 - 15619701
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaatt 158  Q
    ||||||||||||| ||| ||||||| || |||||||||||| | ||||||||||    
T  15619648 atcaattcacatccaactcactttttaccaaaatcaattctctcaaactcaatt 15619701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 25312651 - 25312704
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaaca 78  Q
    ||||||||||||| ||||| |||| ||||||| ||| || ||||||||||||||    
T  25312651 attttggtaattatacatctaaaagcaattttgattcaatgtatccaaacaaca 25312704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 54150462 - 54150515
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaaca 78  Q
    |||||| |||||| ||||| |||| ||||||| |||||| ||||||||||||||    
T  54150462 attttgataattatacatctaaaagcaattttgatttaatgtatccaaacaaca 54150515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 13183082 - 13183010
Alignment:
Q  125 cttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||| || |||||||||| | | | |||||||| | |||||||||||||||| ||||| | |||||||||||    
T  13183082 cttttaaccaaaatcaattatctcagactcaattttatcaaaatcaattatcgtcaccgtcataccaaacaca 13183010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 8e-45; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 39977508 - 39977714
Alignment:
Q  9 aatataattaagaccaattttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatcagcttgaaataatcacttttgtat---- 104  Q
    ||||||||||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||        
T  39977508 aatataattaagacccattttgataattaaacatctaaaatcaattttaatttaaagtatccaaacaacatcaacttgaaataataacttttatatgagt 39977607  T
Q  105 --------------atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtacc 190  Q
                  ||||||||| ||||||| ||||||||||||||||||||||||| ||||| |||| | |||||||||||||||||||||||| ||||    
T  39977608 ttatccaaaaataaatcaattcatatcaaactcacttttgactaaaatcaattctttcaaactaaattctatcaaaatcaattatcgccaccgccatacc 39977707  T
Q  191 aaacaca 197  Q
    |||||||    
T  39977708 aaacaca 39977714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 3622499 - 3622407
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| ||||||||||| || ||||||||    
T  3622499 atcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataacaaacaca 3622407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 34366021 - 34365929
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||| | |||  |||||| ||||||||||||||||| |||||| ||||| |||||||||||| | ||||||||| |||||||||||    
T  34366021 atcaattcacacccaactaacttttaactaaaatcaattctttcaaactccattatatcaaaatcaattctagccaccgccataccaaacaca 34365929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 37562640 - 37562732
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| || |||||||||||| |||||||||||| | |||||||||||| || ||||||||  ||||||||||    
T  37562640 atcaattcacatccaactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatcaattctccccaccgccaaaccaaacaca 37562732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 43631735 - 43631643
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||| ||| ||||||| || |||||||||||| | |||||||||| | ||||||||||||||| |||||||| |||||||||||    
T  43631735 atcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatccccaccgccataccaaacaca 43631643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 41715727 - 41715824
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacacaaacaa 202  Q
    ||||||| ||||| ||| ||||||| |  |||||||||||| ||||| |||||| | |||||||||||| ||||||||||| ||||||||||| ||||    
T  41715727 atcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaaacacacacaa 41715824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 39391176 - 39391084
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || ||||||||||||   ||| |||||| | |||||||||||| ||||||||||| |||||||||||    
T  39391176 atcaattcacctcaaactcacttttaaccaaaatcaattctaaaaaaatcaattctatcaaaatcaattttcgccaccgccataccaaacaca 39391084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 47217580 - 47217488
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || || |||||| ||||||||||    
T  47217580 atcaattcacatcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccgccgccgaaccaaacaca 47217488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 44967438 - 44967349
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaac 194  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||||| |||||||||||| |||| |||| | ||||||||    
T  44967438 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattctcgctaccgtcataccaaac 44967349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 3342860 - 3342952
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||| ||| ||||||| ||||||||||||||| | |||||||||| | ||||||| |||| || ||||||||  ||||||||||    
T  3342860 atcaattcatatccaactcacttttaactaaaatcaattctctcaaactcaattctatcaaaattaattctccccaccgccaaaccaaacaca 3342952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 3375560 - 3375652
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||| ||||| ||||||| || ||||| |||||| | |||||||||| | |||||||||||| || ||| | ||||||||||||||    
T  3375560 atcaattcacaccaaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctctccatcaccgtaccaaacaca 3375652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 34010409 - 34010489
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgcc 185  Q
    |||| |||| ||| ||| ||||||| || |||||||||||||| |||||||||| | |||||||||||| |||||||||||    
T  34010409 atcagttcatatccaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgccaccgcc 34010489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 42752230 - 42752138
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || ||||||||||||   ||| |||||| ||||||||||||||||| ||||||| | ||||||||||    
T  42752230 atcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgcagaaccaaacaca 42752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 48134649 - 48134741
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||| | |||||| ||||||| || |||||||||||| | |||||||||| | ||||||| |||| |||| |||||| |||||||||||    
T  48134649 atcaattctcctcaaacccacttttaacaaaaatcaattctctcaaactcaattctatcaaaattaattttcgcaaccgccataccaaacaca 48134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 40903304 - 40903250
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    ||||||||||||| |||||||||||||||||| |||| || ||||||||||||||    
T  40903304 attttggtaattatacatccaaaatcaattttgatttgaactatccaaacaacat 40903250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 10371997 - 10371905
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || ||||||   |||||||||||    
T  10371997 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgttttaccaaacaca 10371905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 32186912 - 32186968
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||| |||||||||||||||||  ||  ||||||||||||||||    
T  32186912 attttggtaattagacacccaaaatcaattttaatccaatctatccaaacaacatca 32186968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 37639500 - 37639592
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||  ||||||| || |||||||||||| | |||||||||| | |||||||||||| || || ||||| |||||||||||    
T  37639500 atcaattcacattcaattcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccgccgccataccaaacaca 37639592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 38230138 - 38230230
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| ||||| |||||| | |||||||||||| || |  ||||| |||||||||||    
T  38230138 atcaattcacattcaactcacttttaaccaaaatcaattctcttaaattcaattctatcaaaatcaattctctcggccgccataccaaacaca 38230230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 41715629 - 41715685
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||| |||||||||||||||||  ||  ||||||||||||||||    
T  41715629 attttggtaattagacacccaaaatcaattttaatccaatctatccaaacaacatca 41715685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 48459780 - 48459872
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || ||| || | |||||||||||    
T  48459780 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaacgtcataccaaacaca 48459872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 32187010 - 32187100
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaaca 195  Q
    ||||||| ||||| ||| ||||||| |  |||||||||||| ||||| | |||| | |||||||||||| ||||||||| | |||||||||    
T  32187010 atcaatttacatctaactcacttttaatcaaaatcaattctcttaaaattaattctatcaaaatcaattctcgccaccgtcataccaaaca 32187100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 32205995 - 32206044
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactc 154  Q
    ||||||||||||||||| ||||||| | ||||||||||||||| ||||||    
T  32205995 atcaattcacatcaaacccacttttaattaaaatcaattctttcaaactc 32206044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 47022008 - 47022081
Alignment:
Q  124 acttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||| || |||||||||||| | |||||||||| | ||||||||||||||| |||||  | |||||||||||    
T  47022008 acttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatccccaccatcataccaaacaca 47022081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 9456174 - 9456262
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaa 193  Q
    ||||||| || |||||| ||||||| || |||||||||||| |  |||| |||| | |||||||||||| || | ||||||||||||||    
T  9456174 atcaatttacctcaaactcacttttaaccaaaatcaattctctcgaacttaattctatcaaaatcaattctcactaccgccgtaccaaa 9456262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 43581607 - 43581663
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||||| |||||| ||||| |||| ||||||||||| ||| ||||||||||||||||    
T  43581607 attttgataattacacatctaaaagcaattttaattcaaactatccaaacaacatca 43581663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 43737978 - 43737910
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||||| ||| |||  |||||| |  |||||||||||| |||||||||||||||| ||||||||||    
T  43737978 atcaattcatatctaactaacttttaatcaaaatcaattctcttaaactcaattatgttaaaatcaatt 43737910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 19097496 - 19097559
Alignment:
Q  134 aaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||||| |||||||||| | ||||||| |||| || || ||||| |||||||||||    
T  19097496 aaaatcaattctttcaaactcaattctatcaaaattaattctcaccgccgccataccaaacaca 19097559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 40903178 - 40903131
Alignment:
Q  134 aaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccac 181  Q
    |||||||||||| | ||| ||||||||||||||||||||| |||||||    
T  40903178 aaaatcaattctatcaaaatcaattatgtcaaaatcaattttcgccac 40903131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 37562544 - 37562598
Alignment:
Q  27 tttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||||| |||| |||| ||||||||||||| ||| ||| ||||||||||||||||    
T  37562544 tttggtcattacacatacaaaatcaattttcattcaaactatccaaacaacatca 37562598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 46541672 - 46541762
Alignment:
Q  107 caattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||  ||| ||||| | || |||||||||||| | |||||||||| | |||||||||||| |  ||||||||  ||||||||||    
T  46541672 caattcacattcaactcacttctaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttaaccaccgccaaaccaaacaca 46541762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 48134561 - 48134627
Alignment:
Q  34 attagacatccaaaatcaattttaatttaaagtatccaaacaacatcagcttgaaataatcactttt 100  Q
    |||| |||| ||||||||||||| ||| ||| |||||||||||||||| |||  || ||||||||||    
T  48134561 attacacattcaaaatcaattttgattcaaactatccaaacaacatcaacttataaaaatcactttt 48134627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 386501 - 386428
Alignment:
Q  124 acttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||| || ||||||||| || | |||||||||||| |||||||||||| |  ||||||||  ||||||||||    
T  386501 acttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaattttaaccaccgccaaaccaaacaca 386428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 3750756 - 3750809
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaatt 158  Q
    ||||||||||||| ||| ||||||| || |||||||||||| | ||||||||||    
T  3750756 atcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaatt 3750809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 47217659 - 47217622
Alignment:
Q  44 caaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  47217659 caaaatcaattttaattcaaactatccaaacaacatca 47217622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 36920217 - 36920149
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||| | ||| ||| ||||||| || |||||||||||||| |||||||||| | ||||||| ||||    
T  36920217 atcaatttatatctaactcacttttaaccaaaatcaattctttcaaactcaattttatcaaaattaatt 36920149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 39634204 - 39634112
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||  ||| ||||||| || ||||||||||||   ||| |||||| |||| ||||||||| || ||||||| | ||||||||||    
T  39634204 atcaattcatattcaactcacttttaaccaaaatcaattctaacaaaatcaattctgtccaaatcaattctctccaccgcagaaccaaacaca 39634112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 27911367 - 27911441
Alignment:
Q  26 ttttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatcagcttgaaataatcactttt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  27911367 ttttggtaattagacatctaaaatcaattttaatttaaagtatccaaataacatcaacttgaaataatcactttt 27911441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 42516026 - 42515936
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaaca 195  Q
    ||||||||||||||||| ||||||| ||||||||||||||| | |||||||||||| |||||||||||| || |||||||| |||||||||    
T  42516026 atcaattcacatcaaactcacttttaactaaaatcaattctctcaaactcaattatatcaaaatcaattttctccaccgccataccaaaca 42515936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 7472724 - 7472632
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| ||||||||| | |||||||||||    
T  7472724 atcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgtcataccaaacaca 7472632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 39141520 - 39141428
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||| ||| ||||||| || |||||||||||||| |||||||||||| |||||||||||| |||||||||||  ||||||||||    
T  39141520 atcaattcatatccaactcacttttaaccaaaatcaattctttcaaactcaattatatcaaaatcaattctcgccaccgcccaaccaaacaca 39141428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 31224738 - 31224818
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgcc 185  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||| | |||||||||||| ||| |||||||    
T  31224738 atcaattcacatccaactcacttttaactaaaatcaattctttcaaactcaattctatcaaaatcaattttcgtcaccgcc 31224818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 9988551 - 9988459
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || ||||||||  ||||||||||    
T  9988551 atcaattcacatccaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgccaaaccaaacaca 9988459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 14821220 - 14821312
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||| |||| ||||||| ||||||||||||||  | |||||||||| | ||||||| |||||||| ||||||  |||||||||||    
T  14821220 atcaattcacattaaactcacttttaactaaaatcaattcactcaaactcaattctatcaaaattaattatcgtcaccgctataccaaacaca 14821312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 36548257 - 36548349
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||||| || ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || |||||||| |||||||||||    
T  36548257 atcaattcacatcagactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccataccaaacaca 36548349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 31562737 - 31562646
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacac 196  Q
    |||||||||| |||||  ||||||| || |||||||||||| | |||||||||| | |||||||||||| |||||||| || ||||||||||    
T  31562737 atcaattcacctcaaattcacttttaaccaaaatcaattctctcaaactcaattttatcaaaatcaattctcgccaccaccataccaaacac 31562646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 1945089 - 1944997
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || || ||||| |||||||||||    
T  1945089 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccgccgccataccaaacaca 1944997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 2213705 - 2213797
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || |  | ||| |||||||||||    
T  2213705 atcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctcatctgccataccaaacaca 2213797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 7296213 - 7296285
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcg 177  Q
    ||||||||||||||||| || |||| || |||||||||||| | |||||||||||| ||||| ||||||||||    
T  7296213 atcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaagtcaattatcg 7296285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 32502043 - 32502135
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| | |||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || | |||||| |||||||||||    
T  32502043 atcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcacgaccgccataccaaacaca 32502135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 38600591 - 38600539
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaac 77  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  38600591 attttggtaattagacatccaaaaacaattttaatctaaagtatctaaacaac 38600539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 41580869 - 41580806
Alignment:
Q  14 aattaagaccaattttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaac 77  Q
    |||||| ||| |||||||||||||||||||||||| |||||| ||| |||| ||||||||||||    
T  41580869 aattaaaacccattttggtaattagacatccaaaaacaatttcaatctaaaatatccaaacaac 41580806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 18970435 - 18970386
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaac 74  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  18970435 attttggtaattagacatccaaaaacaattttaatccaaagtatccaaac 18970386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 42516121 - 42516048
Alignment:
Q  27 tttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatcagcttgaaataatcactttt 100  Q
    |||||| |||| |||| ||||||||||||||||| ||| |||||||||||||||| || |||| ||||| ||||    
T  42516121 tttggttattatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcgaaagaatcattttt 42516048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 2213564 - 2213656
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || |||||||  |||||||||||    
T  2213564 atcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaacaca 2213656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 2215310 - 2215402
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || |||||||||||| | || ||||||| | |||||||||||| || | |||||  |||||||||||    
T  2215310 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaagctcaattctatcaaaatcaattctcacaaccgctataccaaacaca 2215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 8170370 - 8170462
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||  ||| ||||||| |  |||||||||||| | |||||||||| | ||||||| |||| ||||||||||| |||||||||||    
T  8170370 atcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaattaattctcgccaccgccctaccaaacaca 8170462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 18511062 - 18511118
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||||||||||||  ||| ||||||||||||| ||||||| ||||||||||||||||    
T  18511062 attttggtaattatgcattcaaaatcaattttgatttaaattatccaaacaacatca 18511118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 43436429 - 43436373
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||| |||||||||||||||||  ||  ||||||||||||||||    
T  43436429 attttggtaattagacacccaaaatcaattttaatccaatctatccaaacaacatca 43436373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 44619111 - 44619036
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgcca 180  Q
    |||||||| | |||||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| ||||||    
T  44619111 atcaattcccctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgcca 44619036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 3602607 - 3602553
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    ||||||||||||| ||| | |||||||||||||||| ||| ||||||||||||||    
T  3602607 attttggtaattatacaccaaaaatcaattttaattcaaactatccaaacaacat 3602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 28641604 - 28641677
Alignment:
Q  27 tttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatcagcttgaaataatcactttt 100  Q
    |||||| |||| ||||  |||||||||||||||| ||  |||||||||||||||| |||  |||||||||||||    
T  28641604 tttggtcattacacatttaaaatcaattttaattcaacatatccaaacaacatcaacttataataatcactttt 28641677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 36548179 - 36548216
Alignment:
Q  44 caaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  36548179 caaaatcaattttaatttaaattatccaaacaacatca 36548216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 43858370 - 43858309
Alignment:
Q  15 attaagaccaattttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaa 76  Q
    ||||| ||| ||||||||||||| ||| ||||||||||||||| || ||| |||||||||||    
T  43858370 attaatacccattttggtaattatacacccaaaatcaattttagttaaaactatccaaacaa 43858309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 5916292 - 5916200
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | ||| | |||| | |||||||||||| || || ||||| |||||||||||    
T  5916292 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattctccccgccgccataccaaacaca 5916200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 27911493 - 27911541
Alignment:
Q  149 aaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| | |||||||||||||||||| |||||| ||||||||||    
T  27911493 aaactcaattctatcaaaatcaattatcgccgccgccgaaccaaacaca 27911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 28127337 - 28127245
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| |  |||||||||||| | ||||| |||| | |||||||||||| || |||||||  |||||||||||    
T  28127337 atcaattcacattcaactcactttttagcaaaatcaattctctcaaactaaattctatcaaaatcaattctccccaccgctataccaaacaca 28127245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 30007603 - 30007511
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || ||||| |||||| | |||||||||| | |||||||||||| || |||| ||| ||||| |||||    
T  30007603 atcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctccccacagccataccatacaca 30007511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 34433356 - 34433264
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| ||  |||||| | ||||||||||    
T  34433356 atcaattcacattcaactcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattctcttcaccgctgaaccaaacaca 34433264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 36312334 - 36312426
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | ||| | |||| | |||||||||||| || || ||||| |||||||||||    
T  36312334 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattctccccgccgccataccaaacaca 36312426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 45714718 - 45714650
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||||||||| ||| || |||| |  |||||||||||| | |||||||||||| ||||||||||||    
T  45714718 atcaattcacatcgaactcatttttaatcaaaatcaattctctcaaactcaattatatcaaaatcaatt 45714650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 8170282 - 8170329
Alignment:
Q  34 attagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||| |||| ||||||||||||||||| ||| ||||||||||||||||    
T  8170282 attatacattcaaaatcaattttaattcaaactatccaaacaacatca 8170329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 14821132 - 14821179
Alignment:
Q  34 attagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||| ||||||||||||| ||| ||| ||||||||||||||||    
T  14821132 attagacattcaaaatcaattttgattcaaaatatccaaacaacatca 14821179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 25747903 - 25747840
Alignment:
Q  134 aaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||| | |||||||||| | ||||| ||||||||| ||||||| | ||||||||||    
T  25747903 aaaatcaattctctcaaactcaattctatcaaactcaattatcaccaccgcggaaccaaacaca 25747840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 2215228 - 2215270
Alignment:
Q  39 acatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||| ||||||||||| ||||||||| ||||||||||||||||    
T  2215228 acattcaaaatcaattctaatttaaattatccaaacaacatca 2215270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 9988647 - 9988593
Alignment:
Q  27 tttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||||| |||| |||| ||||||||||||| ||| ||| ||||||||||||||||    
T  9988647 tttggtcattacacattcaaaatcaattttcattcaaactatccaaacaacatca 9988593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 41580757 - 41580692
Alignment:
Q  108 aattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    |||| ||||||||| ||||||| || |||||||||||| | ||||||||||   ||||||||||||    
T  41580757 aatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattcgatcaaaatcaatt 41580692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 15283386 - 15283350
Alignment:
Q  44 caaaatcaattttaatttaaagtatccaaacaacatc 80  Q
    |||||||||||||||| |||| |||||||||||||||    
T  15283386 caaaatcaattttaatctaaactatccaaacaacatc 15283350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 16467046 - 16467102
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||| ||||| ||||| |||||| || |||| ||||||||| ||||||    
T  16467046 attttggtaattatacatcaaaaattaattttgatctaaactatccaaactacatca 16467102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 26207979 - 26207887
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| |||  |||||| || |||| ||||||| | ||| | |||| | |||||||||||| ||| ||||| | |||||||||||    
T  26207979 atcaattcacatccaactgacttttaaccaaaaccaattctctcaaaattaattctatcaaaatcaattttcgtcaccgtcataccaaacaca 26207887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 28261352 - 28261432
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgcc 185  Q
    ||||||||||||| ||| ||||||| |  |||||||||||| | |||||||||| | | ||||| |||| || ||||||||    
T  28261352 atcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattgtattaaaattaattctctccaccgcc 28261432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 42143416 - 42143324
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| ||||||||||||| | | |||||||||||| ||| |||||||| ||||||||||| |||||||||||    
T  42143416 atcaattcacctcaaactcacttttaactaaaatcaattttctcaaactcaattatatcataatcaattctcgccaccgccataccaaacaca 42143324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 3467590 - 3467682
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  3467590 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacaca 3467682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 4941833 - 4941741
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| |  |||||||||||| | |||||||||||| ||| |||||||| | ||||||||| |||||||||||    
T  4941833 atcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattatatcagaatcaattctagccaccgccataccaaacaca 4941741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 22936845 - 22936753
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | ||||| |||| | |||||||||||| ||||||||||| |||||||||||    
T  22936845 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattctcgccaccgccataccaaacaca 22936753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 40742347 - 40742279
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||||| ||||||| ||||||| || ||||||||||||||||||||||||| | ||||||||||||    
T  40742347 atcaattcagatcaaactcacttttaacgaaaatcaattcttttaaactcaattctatcaaaatcaatt 40742279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 36121593 - 36121500
Alignment:
Q  109 attcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacacaaacaa 202  Q
    ||||||||  ||| ||||||| || |||||||||||  |||||||||||| | |||||||||||| ||| |||||| |||||||||||| ||||    
T  36121593 attcacattcaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgacaccgctgtaccaaacacacacaa 36121500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 26243181 - 26243273
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||||||| ||||||| || |||||||||||| |||||||||||| | |||||||||||| || |  ||||  |||||||||||    
T  26243181 atcaattcatatcaaactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatcaattctcactgccgctataccaaacaca 26243273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 28425524 - 28425432
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || ||||||||||||   ||| |||||| | |||||||||||| ||||||||| | |||||||||||    
T  28425524 atcaattcacctcaaactcacttttaaccaaaatcaattctaacaaaatcaattctatcaaaatcaattttcgccaccgtcataccaaacaca 28425432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 31246367 - 31246275
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || ||||||||||||   ||| |||||| ||||||||||||||||| ||||||| | ||||||||||    
T  31246367 atcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgcagaaccaaacaca 31246275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 27649803 - 27649894
Alignment:
Q  106 tcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||| ||| ||  ||||||| || |||||||||||||| |||||||||| | |||||||||||| ||| |||||||  ||||||||||    
T  27649803 tcaattcatatccaaatcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgtcaccgcccaaccaaacaca 27649894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 22552890 - 22552836
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  22552890 attttagtaattatacatccaaaatcaattttagttgaaagtatccaaacaacat 22552836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 30085673 - 30085599
Alignment:
Q  123 cacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| || |||||||||||| |||||||||||||| |||||||||||| || || ||||  |||||||||||    
T  30085673 cacttttaaccaaaatcaattctcttaaactcaattatatcaaaatcaattctcaccgccgctataccaaacaca 30085599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 25698012 - 25697915
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacacaaacaa 202  Q
    ||||||||||||| ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || |||||||  |||||| |||| ||||    
T  25698012 atcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccgctataccaagcacacacaa 25697915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 41289110 - 41289021
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaac 194  Q
    |||||||||||   ||| ||||||| | ||||||||||||| | |||||||||| |||||||||||||| ||||| |||||  |||||||    
T  41289110 atcaattcacaatcaactcacttttaattaaaatcaattctctcaaactcaattctgtcaaaatcaattctcgccgccgccaaaccaaac 41289021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 3097258 - 3097166
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||||||| ||||||| || |||||||||||| | |||||||||| | ||||||| |||| || |||| ||  |||||||||||    
T  3097258 atcaattcatatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaattaattctcaccactgctataccaaacaca 3097166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 25497748 - 25497816
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||||||||| ||| ||||||| || ||||||||||||  ||||||||||| | ||||||||||||    
T  25497748 atcaattcacatccaactcacttttaaccaaaatcaattctcctaaactcaattttatcaaaatcaatt 25497816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 30759357 - 30759289
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||||||||| ||| ||||||| || |||||||||||| | |||||||||||| | ||||||||||    
T  30759357 atcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattatattaaaatcaatt 30759289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 33627058 - 33626994
Alignment:
Q  133 taaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||| |||||||||| | ||||||||||||  | ||||||||| ||||||||||    
T  33627058 taaaatcaattctttcaaactcaattctatcaaaatcaattccctccaccgccgaaccaaacaca 33626994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 38114501 - 38114593
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| |||  |||||| || |||||||||||| | |||||||||| | ||||||| |||| || ||||||||  ||||||||||    
T  38114501 atcaattcacatccaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaataaattctcaccaccgccaaaccaaacaca 38114593  T

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Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 44926945 - 44927004
Alignment:
Q  138 tcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||| | |||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  44926945 tcaattctatcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacaca 44927004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 440241 - 440149
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||| ||| || |||||||||||| | | |||||||| | ||||||||||||||| || ||| |  ||||||||||    
T  440241 atcaattcacatccaactcacatttaaccaaaatcaattctctcagactcaattctatcaaaatcaattatctccgccgtccaaccaaacaca 440149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 24897636 - 24897548
Alignment:
Q  109 attcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||| ||| ||| ||||||| || ||||||||||||  ||||||||||| | |||||||||||| |  || ||||| |||||||||||    
T  24897636 attcatatccaactcacttttaaccaaaatcaattctcataaactcaattttatcaaaatcaattcttaccgccgccataccaaacaca 24897548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 44926897 - 44926965
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    |||||||||| |||||| ||||||| || |||||||||||| | |||||||||| | ||||| ||||||    
T  44926897 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaactcaatt 44926965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 26125843 - 26125902
Alignment:
Q  134 aaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaa 193  Q
    |||||||||||| |||||||||||| | ||||||| |||| || ||||||| ||||||||    
T  26125843 aaaatcaattctcttaaactcaattctatcaaaattaattctcaccaccgctgtaccaaa 26125902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 29023309 - 29023372
Alignment:
Q  134 aaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||| | |||||||||| | |||||||||||| |||||||| || |||| ||||||    
T  29023309 aaaatcaattctctcaaactcaattctatcaaaatcaattttcgccaccaccataccgaacaca 29023372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 3619218 - 3619164
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    ||||||||||||| ||||  |||||||||||| ||| ||| ||||||||||||||    
T  3619218 attttggtaattatacatttaaaatcaattttgattcaaactatccaaacaacat 3619164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 38152322 - 38152268
Alignment:
Q  27 tttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||||| |||| || | ||||||||||||| ||||||||||||||||| ||||||    
T  38152322 tttggtcattacacgttcaaaatcaattttgatttaaagtatccaaaccacatca 38152268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 6399160 - 6399107
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaatt 158  Q
    ||||||||||||||||| ||||||| || | |||||||||| | ||||||||||    
T  6399160 atcaattcacatcaaactcacttttaaccataatcaattctatcaaactcaatt 6399107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 22552763 - 22552722
Alignment:
Q  134 aaaatcaattcttttaaactcaattatgtcaaaatcaattat 175  Q
    |||||||||||  ||||| |||||||||||||||||||||||    
T  22552763 aaaatcaattcaattaaaatcaattatgtcaaaatcaattat 22552722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 24297740 - 24297687
Alignment:
Q  26 ttttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    |||||||||||| ||||  |||||||||||| ||| ||| ||||||||||||||    
T  24297740 ttttggtaattatacatgtaaaatcaattttgattcaaactatccaaacaacat 24297687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 40742181 - 40742234
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaatt 158  Q
    ||||||||||||| ||| ||||||| || |||||||||||| | ||||||||||    
T  40742181 atcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaatt 40742234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 36114085 - 36114001
Alignment:
Q  113 acatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||  |||||| |  |||||||||||| | |||||||||| | |||||||||||| || || ||| | |||||||||||    
T  36114085 acatcaaacttacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccgccgtcataccaaacaca 36114001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 41289208 - 41289152
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||   ||| ||||||||||||| ||| ||| ||||||||||||||||    
T  41289208 attttggtaattttgcattcaaaatcaattttgattcaaactatccaaacaacatca 41289152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 41981136 - 41981172
Alignment:
Q  45 aaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  41981136 aaaatcaattttgattcaaagtatccaaacaacatca 41981172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 13739254 - 13739346
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  13739254 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacaca 13739346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 13744754 - 13744846
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  13744754 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacaca 13744846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 29409303 - 29409215
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaa 193  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| |||||||||| | | |||||||||| ||||||||| | |||||||    
T  29409303 atcaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaattctattaaaatcaattttcgccaccgtcataccaaa 29409215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 33899057 - 33898965
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||||||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || |||||||  |||||||||||    
T  33899057 atcaattcatatcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgctataccaaacaca 33898965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 6208115 - 6208023
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| |  |||||||||||  | ||| |||||| | |||||||||||||||||||||||  |||||||||||    
T  6208115 atcaattcacattcaactcacttttaatcaaaatcaattcactcaaaatcaattctatcaaaatcaattatcgccaccgctataccaaacaca 6208023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 17830050 - 17829958
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || |||| ||  |||||||||||    
T  17830050 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccacagctataccaaacaca 17829958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 21455933 - 21455997
Alignment:
Q  109 attcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||||| |||  |||||| ||||||||||||||||  |||||||||||| ||||||||||||    
T  21455933 attcacatccaacttacttttaactaaaatcaattcttacaaactcaattatatcaaaatcaatt 21455997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 699631 - 699697
Alignment:
Q  131 actaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||||| |||||||||| | ||||||||||||  | ||||||||| | ||||||||    
T  699631 actaaaatcaattctttcaaactcaattctatcaaaatcaattccctccaccgccgaatcaaacaca 699697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 7215640 - 7215690
Alignment:
Q  123 cacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||| ||||||||||| ||||  |||||||||||| ||||||||||||    
T  7215640 cacttttaactaaaatcaagtcttaaaaactcaattatatcaaaatcaatt 7215690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 16122035 - 16121965
Alignment:
Q  123 cacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaa 193  Q
    ||||||| || |||||||||||| | ||| |||||| | ||||||||||||||  |||||||| |||||||    
T  16122035 cacttttaaccaaaatcaattctatcaaaatcaattttatcaaaatcaattataaccaccgccataccaaa 16121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 29399816 - 29399755
Alignment:
Q  134 aaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaaca 195  Q
    |||||||||||| | |||||||||| | |||||||||||| || ||||||||  ||||||||    
T  29399816 aaaatcaattctatcaaactcaattctatcaaaatcaattctctccaccgccaaaccaaaca 29399755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 1312491 - 1312399
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||| |||  ||| ||||||| || |||||||||| | | |||||| ||| | |||||||||||| || ||||||| | ||||||||||    
T  1312491 atcaattcgcattcaactcacttttaaccaaaatcaattttatcaaactcgattctatcaaaatcaattttctccaccgctgaaccaaacaca 1312399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 10826140 - 10826232
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||  ||| ||||||| || |||||||||||| | |||||||||| | ||||||| |||| || || |||||  ||||||||||    
T  10826140 atcaattcaaattcaactcacttttaaccaaaatcaattctctcaaactcaattttatcaaaattaattctcaccgccgccaaaccaaacaca 10826232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 42850272 - 42850180
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| || |||||||||||  |||||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  42850272 atcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgccataccaaacaca 42850180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 50977391 - 50977301
Alignment:
Q  107 caattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||||| ||||||| || |||||||||||||| |||||| ||| | |||||||||||| ||||||||||| |||||||||||    
T  50977391 caattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattctcgccaccgccataccaaacaca 50977301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 13056070 - 13056162
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||   ||| ||||||| || |||||||||||||| |||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  13056070 atcaattcacactcaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattatcgccaccgccataccaaacaca 13056162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 1199900 - 1199992
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || ||||| |||||| | |||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  1199900 atcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacaca 1199992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 11023383 - 11023291
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| | |||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || |||||||| |||||||||||    
T  11023383 atcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccataccaaacaca 11023291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 25230079 - 25230171
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| ||||||||||||||| | ||||||| || | |||||||||||| ||||||||| | |||||||||||    
T  25230079 atcaattcacattcaactcacttttaactaaaatcaattctctcaaactcagttctatcaaaatcaattctcgccaccgtcataccaaacaca 25230171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 47123459 - 47123551
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| | ||||||||| |||||||||||    
T  47123459 atcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatttttgccaccgccataccaaacaca 47123551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 50406203 - 50406295
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| |  |||||||| ||||| |||||||||| | |||||||||||| ||||||||||  |||||||||||    
T  50406203 atcaattcacatctaactcacttttaatcaaaatcaaatctttcaaactcaattttatcaaaatcaattctcgccaccgctataccaaacaca 50406295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 5410712 - 5410804
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||| ||| ||||||| |  |||||||||||||| ||| |||||||| |||||||||||| ||||| |||||  ||||||||||    
T  5410712 atcaatttacatccaactcacttttaatcaaaatcaattctttcaaattcaattatatcaaaatcaattctcgccgccgccaaaccaaacaca 5410804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 7826407 - 7826315
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||| | ||||||| || |||||||||||| | ||| |||||| | |||||||||||| || ||||||||  ||||||||||    
T  7826407 atcaattcacatcaagctcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattttctccaccgccaaaccaaacaca 7826315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 10470662 - 10470754
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||  ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  10470662 atcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccctaccaaacaca 10470754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 26058314 - 26058406
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||| ||  ||||||| |  |||||||||||| ||||| |||||| | |||||||||||| ||||||||||| |||||||||||    
T  26058314 atcaatttacatctaattcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaaacaca 26058406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 27801705 - 27801613
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||| ||| ||||||| |  |||||||||||| ||||| |||||| | |||||||||||| ||||||||| | |||||||||||    
T  27801705 atcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgtcataccaaacaca 27801613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 31223447 - 31223539
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| || |||||||||||| | |||||||||| | | |||||||||| || ||||||||  ||||||||||    
T  31223447 atcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatcaattctccccaccgccaaaccaaacaca 31223539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 45710121 - 45710211
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaaca 195  Q
    ||||||||||||  ||| ||||||| |  |||||||||||  | |||||||||| | |||||||||||||||||||||||  |||||||||    
T  45710121 atcaattcacatacaactcacttttaatcaaaatcaattcactcaaactcaattctatcaaaatcaattatcgccaccgctataccaaaca 45710211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 6166182 - 6166274
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||||||| ||||| | || |||||||||||| | ||| |||||| | |||||||||||| || |||||||  |||||||||||    
T  6166182 atcaattcagatcaaactcacttctaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgcgataccaaacaca 6166274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 20800330 - 20800238
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | ||| |||||| | |||||||||||| || || ||||| |||||||||||    
T  20800330 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccataccaaacaca 20800238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 26058216 - 26058272
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||| |||||||||||||||||  ||  ||||||||||||||||    
T  26058216 attttggtaattagacacccaaaatcaattttaatccaatctatccaaacaacatca 26058272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 34718427 - 34718478
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaac 77  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  34718427 attttggtaattagacatccaaagt-aattttaattcaaagtatccaaacaac 34718478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 35569255 - 35569163
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | ||| |||||| | |||||||||||| || || ||||| |||||||||||    
T  35569255 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccataccaaacaca 35569163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 43728931 - 43728839
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || ||| |||  |||||||||||    
T  43728931 atcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattctctccatcgctataccaaacaca 43728839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 48510981 - 48511073
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||| | | ||||||||||   |||||||||||| ||||| ||||| |||||||||||    
T  48510981 atcaattcacattcaactcacttttaaccaaaatcaattatctcaaactcaattcaatcaaaatcaattctcgccgccgccataccaaacaca 48511073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 49243035 - 49242956
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgc 184  Q
    ||||||||||||| ||| || |||| || |||||||||||| | |||||||||||| ||||||| |||| || |||||||    
T  49243035 atcaattcacatccaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaaattaattctcaccaccgc 49242956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 31223351 - 31223405
Alignment:
Q  27 tttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||||| |||| |||| ||||||||||||||||| ||| ||||||||||||||||    
T  31223351 tttggtcattacacattcaaaatcaattttaattcaaactatccaaacaacatca 31223405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 15884300 - 15884368
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||||||||| ||| ||||||| || |||||||||||| | |||||||| | | ||||||||||||    
T  15884300 atcaattcacatccaactcacttttaaccaaaatcaattctgtcaaactcaactctatcaaaatcaatt 15884368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 6464592 - 6464639
Alignment:
Q  34 attagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||| ||||||||||||| ||| ||| ||||||||||||||||    
T  6464592 attagacattcaaaatcaattttgattcaaactatccaaacaacatca 6464639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 45710033 - 45710080
Alignment:
Q  34 attagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||| ||||||||||||| ||| ||| ||||||||||||||||    
T  45710033 attagacattcaaaatcaattttgattcaaactatccaaacaacatca 45710080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 47123361 - 47123436
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatcagcttgaaataatcactttt 100  Q
    |||||| |||||| ||||| |||| ||||||| |||||| |||||||||||||| || |||  || ||||||||||    
T  47123361 attttgataattatacatctaaaagcaattttgatttaatgtatccaaacaacaccaacttataagaatcactttt 47123436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 6464680 - 6464770
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaaca 195  Q
    |||||||||||| |||| ||||||| || ||||| || ||  | |||||||||||| |||||||||||| ||| |||| |  |||||||||    
T  6464680 atcaattcacattaaactcacttttaaccaaaatgaactcactcaaactcaattatatcaaaatcaattctcgtcaccactataccaaaca 6464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 9447533 - 9447583
Alignment:
Q  50 caattttaatttaaagtatccaaacaacatcagcttgaaataatcactttt 100  Q
    ||||||||||| ||| |||||||||||||||| || |||| ||||||||||    
T  9447533 caattttaattcaaactatccaaacaacatcaactcgaaagaatcactttt 9447583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 10470579 - 10470621
Alignment:
Q  39 acatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||    
T  10470579 acattcaaaatcaattttaattcaaactatccaaacaacatca 10470621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 36205266 - 36205356
Alignment:
Q  107 caattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||| ||| ||||||| |  |||||||||||| | ||||||||||  || |||||||||| || |||||| | |||||||||||    
T  36205266 caattcatatctaacccacttttaatcaaaatcaattctctcaaactcaattccgttaaaatcaattctcaccaccgtcataccaaacaca 36205356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 12247495 - 12247584
Alignment:
Q  108 aattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||| ||||| ||| ||||||| || | |||||||||| |||||||||||| | | |||||||||| ||  ||||||  |||||||||||    
T  12247495 aatttacatccaactcacttttaaccagaatcaattctcttaaactcaattctattaaaatcaattttcatcaccgctataccaaacaca 12247584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 32365152 - 32365205
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaatt 158  Q
    ||||||| ||||  ||| ||||||||||||||||||||| ||||||| ||||||    
T  32365152 atcaatttacattcaactcacttttgactaaaatcaattattttaaaatcaatt 32365205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 11051459 - 11051407
Alignment:
Q  27 tttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    |||||| |||| |||| ||||||||||||| ||| ||| ||||||||||||||    
T  11051459 tttggtcattacacattcaaaatcaatttttattcaaactatccaaacaacat 11051407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 13931695 - 13931786
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||||| || |||| |  |||||||||| ||  |||||||||| | |||||||||| |  | |||||||| |||||||||||    
T  13931695 atcaattcacatcaaactcatttttaaacaaaatcaatttttggaaactcaattctatcaaaatcaa-tcccaccaccgccataccaaacaca 13931786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 15884191 - 15884255
Alignment:
Q  15 attaagaccaattttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    ||||| ||| |||||||||||||  ||| ||||||||||||| ||  ||| ||||||||||||||    
T  15884191 attaatacccattttggtaattatgcattcaaaatcaattttgatccaaactatccaaacaacat 15884255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 46033266 - 46033210
Alignment:
Q  23 caattttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    ||||||| ||||||| |||| ||||||||||||| ||  ||| ||||||||||||||    
T  46033266 caattttagtaattatacattcaaaatcaattttgataaaaactatccaaacaacat 46033210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 2320 - 2230
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaaca 195  Q
    |||||||||| |||||| ||||||| || |||||||||| | | |||||||||| |||||||||||||| ||||||||||| |||||||||    
T  2320 atcaattcacctcaaactcacttttaaccaaaatcaattatgtcaaactcaattctgtcaaaatcaattttcgccaccgccataccaaaca 2230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 5710433 - 5710343
Alignment:
Q  107 caattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||||| ||||||| || |||||||||||||| |||||| ||| | |||||||||||| ||||||||||| |||||||||||    
T  5710433 caattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattctcgccaccgccataccaaacaca 5710343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 32454599 - 32454692
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattat-gtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || |||||||||||| | |||||||||| |  |||||||||||| ||||||||||| |||||||||||    
T  32454599 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctaatcaaaatcaattctcgccaccgccataccaaacaca 32454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 9275533 - 9275441
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||| ||| ||||||| || |||||||||||| |||||||||||| | |||||||||||| || ||||||||  ||||||||||    
T  9275533 atcaattaacatctaactcacttttaaccaaaatcaattctcttaaactcaattttatcaaaatcaattttccccaccgccaaaccaaacaca 9275441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 13253132 - 13253040
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||  ||| ||||||| || |||||||||||||| |||||||||| | |||||||||||| |||||||||||  ||||||||||    
T  13253132 atcaattcatattcaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgccaccgcccaaccaaacaca 13253040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 24045893 - 24045985
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||||| || ||||||| || |||||||||||| | ||| |||||| | |||||||||||| || |||||||| |||||||||||    
T  24045893 atcaattcacatcagactcacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgccataccaaacaca 24045985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 40885274 - 40885366
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| |  |||||||||||| |||||||||||| |  ||||||||||| || |||||||| |||||||||||    
T  40885274 atcaattcacatccaactcacttttaatcaaaatcaattctcttaaactcaattctaacaaaatcaattttcaccaccgccataccaaacaca 40885366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 34106996 - 34106928
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||||||||| ||| ||||||| || |||| |||||||||||||||||||| | ||||||||||||    
T  34106996 atcaattcacatctaactcacttttaaccaaaaacaattcttttaaactcaattctatcaaaatcaatt 34106928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 41834955 - 41835047
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| || ||| ||||||| || |||||||||||| | ||||| |||| | |||||||||||| || |||||||| |||||||||||    
T  41834955 atcaattcacttccaactcacttttaaccaaaatcaattctctcaaactgaattctatcaaaatcaattctccccaccgccataccaaacaca 41835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 7715000 - 7715095
Alignment:
Q  102 tatatcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||| ||| ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| |  |||||||| ||| |||||||    
T  7715000 tatatcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatttttaccaccgccatacaaaacaca 7715095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 10058137 - 10058229
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||  || ||| ||||||| || ||||||||| || | |||||||||||| |||||||||||| || |||||||| ||| |||||||    
T  10058137 atcaattcatttccaactcacttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaattctccccaccgccatactaaacaca 10058229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 22482252 - 22482344
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | ||| |||||| | |||||||||||| || || ||||| |||||||||||    
T  22482252 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccataccaaacaca 22482344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 32030777 - 32030869
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| |||  |||||| || |||||||||||| | |||||||||| | |||||||||||| || ||||| |  |||||||||||    
T  32030777 atcaattcacatctaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccactataccaaacaca 32030869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 35760252 - 35760344
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || |||||||  |||||||||||    
T  35760252 atcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaacaca 35760344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 39988016 - 39987924
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || || |||   |||||||||||    
T  39988016 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccgccggtataccaaacaca 39987924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 40495407 - 40495315
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||||||| ||||||| || |||||||||| | | |||||||||| | |||||||||||| |  || ||||| |||||||||||    
T  40495407 atcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaattcttcccgccgccataccaaacaca 40495315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 2483763 - 2483671
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| ||||||||||||||    ||| ||||||||||| ||||||||| || ||||||| | || |||||||    
T  2483763 atcaattcacattcaactcacttttaactaaaatcaattccaacaaaatcaattatgtccaaatcaattttctccaccgcagaactaaacaca 2483671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 3667917 - 3668009
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || ||||| |  |||||||||||    
T  3667917 atcaattcacattcaactcactttttaacaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccactataccaaacaca 3668009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 7385981 - 7385913
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    |||||||||| |||||| ||||||| || |||||||||||| | ||||| |||| | ||||||||||||    
T  7385981 atcaattcacctcaaacccacttttaaccaaaatcaattctctaaaacttaattctatcaaaatcaatt 7385913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 8049100 - 8049032
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||| || |||||| ||||||| || |||||||||||| | |||||||||| | ||||||||||||    
T  8049100 atcaattaacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 8049032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 33953933 - 33953853
Alignment:
Q  123 cacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacacaaacaat 203  Q
    ||||||| | ||||||||||||| | |||||||||| |  ||||||||||| || |||| ||| ||||||||||| |||||    
T  33953933 cacttttaaataaaatcaattctctcaaactcaattctaccaaaatcaattttcaccactgccataccaaacacacacaat 33953853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 42146370 - 42146462
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||| ||| ||||||| || |||||||||| | | |||||||||| | |||||||||||| || || ||| | |||||||||||    
T  42146370 atcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctccccgccgtcataccaaacaca 42146462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 16158511 - 16158444
Alignment:
Q  108 aattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattat 175  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||||||| | | | ||||||||||||    
T  16158511 aattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaaatctataaaaatcaattat 16158444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 2430328 - 2430258
Alignment:
Q  123 cacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaa 193  Q
    ||||||| || |||||||||||| | ||||||||||   ||||||| |||| ||||||||||| |||||||    
T  2430328 cacttttaaccaaaatcaattctctcaaactcaattccatcaaaatgaattctcgccaccgccataccaaa 2430258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 41740726 - 41740684
Alignment:
Q  39 acatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||    
T  41740726 acattcaaaatcaattttgatttaaactatccaaacaacatca 41740684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 7714924 - 7714961
Alignment:
Q  44 caaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  7714924 caaaatcaattttaattcaaactatccaaacaacatca 7714961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 24045815 - 24045852
Alignment:
Q  44 caaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  24045815 caaaatcaattttaattcaaattatccaaacaacatca 24045852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 27021191 - 27021283
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| || |||| || |||||||||| | | |||||||||||| ||||||||| || |  ||||||||  ||||||||||    
T  27021191 atcaattcacatttaactcatttttaaccaaaatcaattttctcaaactcaattatatcaaaatcagttctaaccaccgccaaaccaaacaca 27021283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 40791119 - 40791027
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||| ||| ||||||| || |||||||||| | | |||||||||| | |||||||||||| || || |||   |||||||||||    
T  40791119 atcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctccccgccgtgataccaaacaca 40791027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 8498 - 8590
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||||| ||||||| || |||||||||| | | |||||||||| | ||||||||||||||  |||||||| |||||||||||    
T  8498 atcaattcacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaattattcccaccgccataccaaacaca 8590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 15511428 - 15511336
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||| | ||| ||||||| || |||||||||||||| ||||||  || | |||||||||||||||||||||||| |||||||||||    
T  15511428 atcaattcacacccaactcacttttaaccaaaatcaattctttcaaactccgttctatcaaaatcaattatcgccaccgccataccaaacaca 15511336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 42318378 - 42318470
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || |||||||||||| | |||||||||| | |||||||||||||||| ||||||  |||||||||||    
T  42318378 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatcgtcaccgctataccaaacaca 42318470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 50664807 - 50664899
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  50664807 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataccaaacaca 50664899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 53074951 - 53075043
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || |||||||||||| | |||||||||||| |||||||||||| || || |||||||| ||||||||    
T  53074951 atcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattttcaccgccgccgtatcaaacaca 53075043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 55154550 - 55154642
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| ||||||||||||||| | |||||||||| | |||||||||||| ||||||| ||| |||||||||||    
T  55154550 atcaattcacattcaactcacttttaactaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccactgccataccaaacaca 55154642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 4984630 - 4984722
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| || |||||||||| | | ||| |||||||| |||||||||||| || |||||||| |||||||||||    
T  4984630 atcaattcacatctaactcacttttaaccaaaatcaattttctcaaattcaattatatcaaaatcaattctccccaccgccataccaaacaca 4984722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 38125494 - 38125402
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |||||| ||||||| || |||||||||||| | ||| |||||| | |||||||||||| ||| ||||||| |||||||||||    
T  38125494 atcaattcacctcaaacccacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcgtcaccgccataccaaacaca 38125402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 48189494 - 48189402
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||  ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||||||||||||||| |||||||||||    
T  48189494 atcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattatcgccaccgccctaccaaacaca 48189402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 30811584 - 30811492
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| |  |||||||||||| | ||| |||||||| |||||||||||| ||| ||||||| |||||||||||    
T  30811584 atcaattcacattcaactcacttttaatcaaaatcaattctctcaaattcaattatatcaaaatcaattctcgtcaccgccctaccaaacaca 30811492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 38340854 - 38340946
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||| ||| ||||||| || |||||||||||||| |||||  ||| | |||||||||||| || ||| |||| |||||||||||    
T  38340854 atcaattcacatccaactcacttttaaccaaaatcaattctttcaaacttcattctatcaaaatcaattctcaccaacgccataccaaacaca 38340946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 3348292 - 3348384
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||| ||| ||||| | || |||||||||||  |||||||||||| | |||||||||||| ||||||||||  | |||||||||    
T  3348292 atcaatttacatccaactcacttctaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgctatgccaaacaca 3348384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 10853319 - 10853227
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| | || |||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| || |||||||  |||||||||||    
T  10853319 atcaatttatattaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgctataccaaacaca 10853227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 23496366 - 23496458
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||| | |||||||||||| ||  | ||||| |||||||||||    
T  23496366 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcctcgccgccataccaaacaca 23496458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 26519713 - 26519805
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || |||||||  |||||||||||    
T  26519713 atcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctataccaaacaca 26519805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 38172359 - 38172267
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||||||  || ||||||| || |||||||||||| | |||||||||| | | |||||||||| || ||||||||  ||||||||||    
T  38172359 atcaattcacatcccactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatcaattctccccaccgccaaaccaaacaca 38172267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 52966861 - 52966769
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||||||  ||||||| || |||||||||||| | ||| |||||| | |||||||||||| || ||||| ||  ||||||||||    
T  52966861 atcaattcacatcaaagtcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattttctccacctccaaaccaaacaca 52966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 23207120 - 23207041
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgc 184  Q
    ||||||||||||||||| || |||| || |||||||||| |   ||| |||||||| |||||||||||| ||||||||||    
T  23207120 atcaattcacatcaaactcatttttaaccaaaatcaattataacaaaatcaattatatcaaaatcaattttcgccaccgc 23207041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 35930787 - 35930865
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccg 183  Q
    ||||||||| ||||||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || ||||||    
T  35930787 atcaattcatatcaaactcacttttaataaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccg 35930865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 38172455 - 38172401
Alignment:
Q  27 tttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||||| |||| |||| ||||||||||||||||| ||| ||||||||||||||||    
T  38172455 tttggtcattacacattcaaaatcaattttaattcaaactatccaaacaacatca 38172401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 10334206 - 10334279
Alignment:
Q  124 acttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||| || |||||||||||| | |||||||||| | |||||||||||| ||| ||||||| || ||||||||    
T  10334206 acttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcaccgccatatcaaacaca 10334279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 40415345 - 40415280
Alignment:
Q  108 aattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    |||| ||||| ||| ||||||| ||||||||| |||| ||||||||||||| | ||||||||||||    
T  40415345 aatttacatccaactcacttttaactaaaatcgattcctttaaactcaattctatcaaaatcaatt 40415280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 42475758 - 42475847
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaac 194  Q
    ||||||||||||| ||| ||||||| |  |||||||||||| | |||||||||| | | |||||||||| ||| |||||||  |||||||    
T  42475758 atcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctataaaaatcaattctcgtcaccgccaaaccaaac 42475847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 19877466 - 19877534
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||| ||||| ||| ||||||| || |||||||||||||| |||||||||| | ||||||| ||||    
T  19877466 atcaatttacatccaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaataaatt 19877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 21225036 - 21225092
Alignment:
Q  102 tatatcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaatt 158  Q
    |||||||||| ||||||||| ||||||| || |||||||||||| | ||||||||||    
T  21225036 tatatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaatt 21225092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 35425382 - 35425462
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgcc 185  Q
    ||||||||||||  ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| ||| |||||||    
T  35425382 atcaattcacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcaccgcc 35425462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 44939468 - 44939376
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||  ||| ||||||| |  |||||||||||  | ||| |||||| | |||||||||||||||||||||||  |||||||||||    
T  44939468 atcaattcatattcaactcacttttaatcaaaatcaattcactcaaattcaattctatcaaaatcaattatcgccaccgctataccaaacaca 44939376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 48189582 - 48189535
Alignment:
Q  34 attagacatccaaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    |||| |||| ||||||||||||||||| ||| ||||||||||||||||    
T  48189582 attatacattcaaaatcaattttaattcaaactatccaaacaacatca 48189535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 37698539 - 37698485
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    ||||||||||||| ||||  |||||||||||| ||| ||| ||||||||||||||    
T  37698539 attttggtaattatacatgtaaaatcaattttgattcaaactatccaaacaacat 37698485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 45423918 - 45423864
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    ||||||||||||  |||||||||||||||||| ||| ||  ||||||||||||||    
T  45423918 attttggtaattgtacatccaaaatcaattttgattcaagctatccaaacaacat 45423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 16246146 - 16246056
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||||| ||| ||||||| ||||||||||||||  | |||||||||| | | || ||||||| |||| ||||||  ||||||||||    
T  16246146 atcaatttacatctaactcacttttaactaaaatcaattc--tcaaactcaattctattaatatcaattctcgctaccgccaaaccaaacaca 16246056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 32357481 - 32357518
Alignment:
Q  44 caaaatcaattttaatttaaagtatccaaacaacatca 81  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  32357481 caaaatcaattttaattcaaagtacccaaacaacatca 32357518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 42475660 - 42475713
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaaca 78  Q
    ||||||||||||| ||||| |||| ||||||| ||| || ||||||||||||||    
T  42475660 attttggtaattatacatctaaaagcaattttgattcaatgtatccaaacaaca 42475713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 50664719 - 50664764
Alignment:
Q  34 attagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    |||| |||| ||||||||||||||||||||| |||| |||||||||    
T  50664719 attacacattcaaaatcaattttaatttaaactatctaaacaacat 50664764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 8424782 - 8424690
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    |||||||||| |  ||| ||||||| || |||||||||||| | |||||||||| | ||||| ||||||||  |||||||  ||| |||||||    
T  8424782 atcaattcacgttcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaattcaattatgaccaccgctatactaaacaca 8424690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 5882 - 5790
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||| | |||||||||||| |||||||||||| || | ||| || |||||||||||    
T  5882 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattctccctaccaccataccaaacaca 5790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 2079 - 1999
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgcc 185  Q
    ||||||||| ||||||| || |||  || |||||||||||||| |||||||||| | |||||||||||||||| |||||||    
T  2079 atcaattcatatcaaactcattttgaaccaaaatcaattctttcaaactcaattctatcaaaatcaattatcgacaccgcc 1999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 9161 - 9251
Alignment:
Q  107 caattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||| ||| ||| ||||||| |  |||||||||||| | |||||||||| | |||||||||||| || |||||||| |||||||||||    
T  9161 caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgccataccaaacaca 9251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 9071 - 9117
Alignment:
Q  34 attagacatccaaaatcaattttaatttaaagtatccaaacaacatc 80  Q
    |||| |||| ||||||||||||||||| ||| |||||||||||||||    
T  9071 attatacattcaaaatcaattttaattcaaactatccaaacaacatc 9117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 46714 - 46768
Alignment:
Q  25 attttggtaattagacatccaaaatcaattttaatttaaagtatccaaacaacat 79  Q
    ||||||||||||| |||||||||||||||||| |||| || ||||||||||||||    
T  46714 attttggtaattatacatccaaaatcaattttgatttgaactatccaaacaacat 46768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 46840 - 46887
Alignment:
Q  134 aaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccac 181  Q
    |||||||||||| | ||| ||||||||||||||||||||| |||||||    
T  46840 aaaatcaattctatcaaaatcaattatgtcaaaatcaattttcgccac 46887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 29175 - 29083
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||||||  ||| ||||||| || |||||||||||||| ||||| |||| | ||||||||||||||  ||||| ||  ||||||||||    
T  29175 atcaattcacattcaactcacttttaaccaaaatcaattctttcaaacttaattctatcaaaatcaattattaccaccaccaaaccaaacaca 29083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 253177 - 253269
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaattatcgccaccgccgtaccaaacaca 197  Q
    ||||||||| ||| ||| ||| ||| || |||||||||||| | |||||||||| | |||||||||||| || || |||||  ||||||||||    
T  253177 atcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccgccgcccaaccaaacaca 253269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 118462 - 118394
Alignment:
Q  105 atcaattcacatcaaacacacttttgactaaaatcaattcttttaaactcaattatgtcaaaatcaatt 173  Q
    ||||||| ||||||||| ||||||| || |||||| ||||| | ||||||||||   ||||||||||||    
T  118462 atcaatttacatcaaactcacttttaacaaaaatctattctatcaaactcaattcgatcaaaatcaatt 118394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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