View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14821_high_14 (Length: 262)
Name: NF14821_high_14
Description: NF14821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14821_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 48145455 - 48145210
Alignment:
| Q |
1 |
ataataaataaataaaaagtgactttaagtattttaggtgaaataaatttgagcattaagatcatattttcttaatgtttaaaatggaatgacttaattg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48145455 |
ataataaataaataaaaagtgactttaagtattttagatgaaataaatttgagcattaagatcatattttcttaatgtttaaaatggaatgacttaattg |
48145356 |
T |
|
| Q |
101 |
gctgcgctcttgatgctagataggtaacatcgattttattttgggtttatgagaatgttgtagagtcaatagtggatgttggtttgatttgtattggtat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48145355 |
gctgcgctcttgatgctagataggtaacatcgattttattttgggtttatgagaatgttgtagagtcaatagtggatgttggtttgatttgtattggtat |
48145256 |
T |
|
| Q |
201 |
gaattttgttgtgatgctgagtttattcctgttgtactgtcaattg |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48145255 |
gaattttgttgtgatgctgagtttattcctgttgtactgtcaattg |
48145210 |
T |
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