View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14822_high_9 (Length: 223)
Name: NF14822_high_9
Description: NF14822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14822_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 21558358 - 21558565
Alignment:
| Q |
1 |
tggactaatttaccttattaataaatccaaagtggattttatgatataaatttagcgagnnnnnnnnn-gttacacacaattgaactattgctgaataga |
99 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |
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| T |
21558358 |
tggactaatttaccttattaataaatccaaagtggattttatgatataaatttagcgagaaaaaaaaaagttacacacaattgaactattgctgaaacga |
21558457 |
T |
|
| Q |
100 |
ccatggataatttcttaaactttgaaagtgcaatnnnnnnnnctcatttcgaattttataataaaaagatatgagggcattttttgaatttgaaggacgt |
199 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21558458 |
ccatggataatttcttaaactttgaaagtgcaataaaaaaaactcattttgaattttataataaaaagatatgagggcattttttgaatttgaaggacgt |
21558557 |
T |
|
| Q |
200 |
gcaagatg |
207 |
Q |
| |
|
|||||||| |
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| T |
21558558 |
gcaagatg |
21558565 |
T |
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