View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14826_high_4 (Length: 273)
Name: NF14826_high_4
Description: NF14826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14826_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 13 - 254
Target Start/End: Complemental strand, 4643820 - 4643579
Alignment:
| Q |
13 |
cataggtgtaatcagataatcatactggttgatcaactatacagccaagaaaatatattatgttcaaattggaaaaattaaggatatgccacaaactaca |
112 |
Q |
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| T |
4643820 |
cataagtgtaatcagataatcatactggttgatcaactatacagccaagaaaatatattatgttcaaattggaaaaattaaggatatgccacaaactaca |
4643721 |
T |
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| Q |
113 |
cagataatatattatgttcaagaaacgtttactacatacgcattgtttaagaacacaaagcatgcagatacatcatgttgggaatattgaccagttatac |
212 |
Q |
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| T |
4643720 |
cagataatatattatgttcaagaaacgtttactacatacgcattgtttaagaacacaaagcatgcagatacatcatgttgggaatattgaccagttatac |
4643621 |
T |
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| Q |
213 |
aaaacttgggaagtaatttgtatttatgtaccatgctagtgc |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
4643620 |
aaaacttgggaagtaatttgtatttatgtaccatgctagtgc |
4643579 |
T |
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