View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14827_high_2 (Length: 478)

Name: NF14827_high_2
Description: NF14827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14827_high_2
NF14827_high_2
[»] chr4 (30 HSPs)
chr4 (1-478)||(17218714-17219191)
chr4 (3-303)||(10700176-10700471)
chr4 (3-303)||(10913946-10914241)
chr4 (8-303)||(10703129-10703425)
chr4 (8-303)||(10916899-10917195)
chr4 (3-303)||(10725447-10725752)
chr4 (3-303)||(10939216-10939521)
chr4 (3-229)||(17216367-17216596)
chr4 (106-303)||(10671816-10672009)
chr4 (106-303)||(10885456-10885649)
chr4 (141-303)||(10717493-10717655)
chr4 (141-303)||(10931263-10931425)
chr4 (141-303)||(10682243-10682404)
chr4 (141-303)||(10895883-10896044)
chr4 (3-220)||(22067759-22067980)
chr4 (141-303)||(10709237-10709399)
chr4 (141-303)||(10923007-10923169)
chr4 (141-303)||(10666998-10667161)
chr4 (141-303)||(10881143-10881306)
chr4 (211-303)||(22068519-22068611)
chr4 (8-100)||(10709416-10709508)
chr4 (8-100)||(10923186-10923278)
chr4 (8-93)||(10666889-10666974)
chr4 (8-93)||(10881034-10881119)
chr4 (3-98)||(10682128-10682223)
chr4 (3-98)||(10895768-10895863)
chr4 (3-100)||(10717380-10717476)
chr4 (3-100)||(10931150-10931246)
chr4 (312-380)||(29157359-29157427)
chr4 (248-298)||(22198424-22198474)
[»] scaffold0291 (1 HSPs)
scaffold0291 (311-412)||(8344-8445)
[»] chr2 (5 HSPs)
chr2 (150-273)||(19898827-19898949)
chr2 (9-133)||(19898648-19898775)
chr2 (313-409)||(3586593-3586690)
chr2 (315-375)||(10922932-10922992)
chr2 (310-415)||(24500009-24500114)
[»] chr3 (1 HSPs)
chr3 (316-404)||(17143517-17143605)
[»] chr7 (1 HSPs)
chr7 (321-414)||(26762684-26762777)
[»] chr5 (1 HSPs)
chr5 (313-412)||(32418251-32418350)
[»] chr6 (4 HSPs)
chr6 (312-380)||(11087762-11087831)
chr6 (308-351)||(23000986-23001029)
chr6 (308-351)||(23787375-23787418)
chr6 (357-422)||(33597079-33597144)
[»] chr8 (2 HSPs)
chr8 (311-389)||(5860065-5860143)
chr8 (312-380)||(7222154-7222220)


Alignment Details
Target: chr4 (Bit Score: 390; Significance: 0; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 1 - 478
Target Start/End: Complemental strand, 17219191 - 17218714
Alignment:
Q  1 ttaagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagattttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17219191 ttaagtgtatctctttacatcactcaattgattatttaaccttagcaaacatttctattaaaaatatttgacaatcatgaaagttcattatagattttat 17219092  T
Q  101 cttttagtctatcgtaaaagataaaatcccaaaacataaccaatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaa 200  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17219091 cttttagtctatcataaaagataaaatcccaaaacagaaccaatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaa 17218992  T
Q  201 aagtttattataaataaaagtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagc 300  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17218991 aagtttattataaataaaagtatcattggatatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtggaaactgtatgtaatagc 17218892  T
Q  301 cattttgttttttgttctggaccgatcagaagaccaaacacaagttaacacatggtataacttacatcgccttaaggctctgtgtctgaggggacacgcc 400  Q
    || ||| ||||||||||||||||  ||||||||||||||||| |||||| | ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  17218891 cacttttttttttgttctggaccagtcagaagaccaaacacacgttaacgcgtggtataacttacatcgtcttaaggctccgtgtctgaggggacacgcc 17218792  T
Q  401 aactcgagtgcaccgtgacacagagtagtgtacccctatgcgaggatcacgccacgcgcatgctcttactgctcctaa 478  Q
    |||||||||||||||||||||||||||||| |||||  |||||||||||||||||||  ||||||||||||| |||||    
T  17218791 aactcgagtgcaccgtgacacagagtagtgcacccccgtgcgaggatcacgccacgcatatgctcttactgcccctaa 17218714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 3 - 303
Target Start/End: Complemental strand, 10700471 - 10700176
Alignment:
Q  3 aagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagattttatct 102  Q
    |||| |||||||||||||| |||||||||||| |||||||||| ||  ||  | ||||||||| ||||||| | || |||  ||||||||| |||| | |    
T  10700471 aagtttatctctttacatctctcaattgattacttaaccttagagaatatggcgattaaaaatctttgacagtaataaaacttcattatagttttttttt 10700372  T
Q  103 tttagtctatcgtaaaagataaaatcccaaaacataaccaatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaa 202  Q
    || |||||||| ||||||||||||||| |||| | || ||| |||  ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  10700371 ttgagtctatcctaaaagataaaatcctaaaagaaaatcaa-atgacgaatgatgaaaacaactaattttatatataacacattgatgatgtaacaaaaa 10700273  T
Q  203 gtttattataaataaaagtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagcca 302  Q
     ||| |||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |||    
T  10700272 atttgttataaa----agtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatatggaaattgtatgtaataccca 10700177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 3 - 303
Target Start/End: Complemental strand, 10914241 - 10913946
Alignment:
Q  3 aagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagattttatct 102  Q
    |||| |||||||||||||| |||||||||||| |||||||||| ||  ||  | ||||||||| ||||||| | || |||  ||||||||| |||| | |    
T  10914241 aagtttatctctttacatctctcaattgattacttaaccttagagaatatggcgattaaaaatctttgacagtaataaaacttcattatagttttttttt 10914142  T
Q  103 tttagtctatcgtaaaagataaaatcccaaaacataaccaatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaa 202  Q
    || |||||||| ||||||||||||||| |||| | || ||| |||  ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  10914141 ttgagtctatcctaaaagataaaatcctaaaagaaaatcaa-atgacgaatgatgaaaacaactaattttatatataacacattgatgatgtaacaaaaa 10914043  T
Q  203 gtttattataaataaaagtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagcca 302  Q
     ||| |||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |||    
T  10914042 atttgttataaa----agtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatatggaaattgtatgtaataccca 10913947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 303
Target Start/End: Complemental strand, 10703425 - 10703129
Alignment:
Q  8 tatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagatttta----tctt 103  Q
    ||||||||||||||||||||||||||| ||||  ||||| | |||  | ||||||||| ||||||| | || |||  ||||||||| |||||    | ||    
T  10703425 tatctctttacatcactcaattgattacttaattttagcaaacatcgcgattaaaaatctttgacactaataaaacttcattatagtttttaattatttt 10703326  T
Q  104 ttagtctatcgtaaaagataaaatcccaaaacataa-ccaatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaa 202  Q
    | |||||||| |||||||||||||||||||| | || |||||||| |||||| | |||||||||  |||||||||||||||||||| |||||||| ||||    
T  10703325 tgagtctatcctaaaagataaaatcccaaaaaaaaaaccaatatgatgaatggtaaaaacaacttgttttatatataacacattgatgatgtaacaaaaa 10703226  T
Q  203 gtttattataaataaaagtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagcca 302  Q
     ||| |||||||    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| ||| ||||||||||| |||    
T  10703225 ttttgttataaa----agtatcattgggtatttgtttttgttgagaaaattttagattgtagtttaaacatgtcaatgtggaaattgtatgtaataccca 10703130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 303
Target Start/End: Complemental strand, 10917195 - 10916899
Alignment:
Q  8 tatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagatttta----tctt 103  Q
    ||||||||||||||||||||||||||| ||||  ||||| | |||  | ||||||||| ||||||| | || |||  ||||||||| |||||    | ||    
T  10917195 tatctctttacatcactcaattgattacttaattttagcaaacatcgcgattaaaaatctttgacactaataaaacttcattatagtttttaattatttt 10917096  T
Q  104 ttagtctatcgtaaaagataaaatcccaaaacataa-ccaatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaa 202  Q
    | |||||||| |||||||||||||||||||| | || |||||||| |||||| | |||||||||  |||||||||||||||||||| |||||||| ||||    
T  10917095 tgagtctatcctaaaagataaaatcccaaaaaaaaaaccaatatgatgaatggtaaaaacaacttgttttatatataacacattgatgatgtaacaaaaa 10916996  T
Q  203 gtttattataaataaaagtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagcca 302  Q
     ||| |||||||    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| ||| ||||||||||| |||    
T  10916995 ttttgttataaa----agtatcattgggtatttgtttttgttgagaaaattttagattgtagtttaaacatgtcaatgtggaaattgtatgtaataccca 10916900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 3 - 303
Target Start/End: Original strand, 10725447 - 10725752
Alignment:
Q  3 aagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagat----ttt 98  Q
    |||| ||||||||| ||| |||| | |||||| |||||| |||  | |||  ||||||||||| ||| |||||||||||||  || ||||| |    |||    
T  10725447 aagtttatctctttgcataactctaatgattacttaaccataggaaacatcgctattaaaaatctttaacaatcatgaaagtccagtatagtttttattt 10725546  T
Q  99 atcttttagtctatcgtaaaagataaaatcccaaaacataaccaatatgttgaatgatgaaaacaact-gattttatatataacacattgaagatgtaac 197  Q
    ||||||||||||||  |||||||| ||||||||||| | | ||||||||  ||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  10725547 atcttttagtctattataaaagatgaaatcccaaaagacagccaatatgaggaatgatgaaaacaactagtttttatatatatcacattgaagatgtaac 10725646  T
Q  198 -caaaagtttattataaataaaagtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaa 296  Q
      |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||| ||| ||| |||||||||    
T  10725647 aaaaaattttattataaataaaggtatcattgggtatttgttttt-ttgagaaaattttaaattgcagttatagcatgtcaaagtggaaattgtatgtaa 10725745  T
Q  297 tagccat 303  Q
    || ||||    
T  10725746 tacccat 10725752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 3 - 303
Target Start/End: Original strand, 10939216 - 10939521
Alignment:
Q  3 aagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagat----ttt 98  Q
    |||| ||||||||| ||| |||| | |||||| |||||| |||  | |||  ||||||||||| ||| |||||||||||||  || ||||| |    |||    
T  10939216 aagtttatctctttgcataactctaatgattacttaaccataggaaacatcgctattaaaaatctttaacaatcatgaaagtccagtatagtttttattt 10939315  T
Q  99 atcttttagtctatcgtaaaagataaaatcccaaaacataaccaatatgttgaatgatgaaaacaact-gattttatatataacacattgaagatgtaac 197  Q
    ||||||||||||||  |||||||| ||||||||||| | | ||||||||  ||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  10939316 atcttttagtctattataaaagatgaaatcccaaaagacagccaatatgaggaatgatgaaaacaactagtttttatatatatcacattgaagatgtaac 10939415  T
Q  198 -caaaagtttattataaataaaagtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaa 296  Q
      |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||| ||| ||| |||||||||    
T  10939416 aaaaaattttattataaataaaggtatcattgggtatttgttttt-ttgagaaaattttaaattgcagttatagcatgtcaaagtggaaattgtatgtaa 10939514  T
Q  297 tagccat 303  Q
    || ||||    
T  10939515 tacccat 10939521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 17216596 - 17216367
Alignment:
Q  3 aagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagattttat-- 100  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||| | |||  |||||| || | ||||||||||||||||| ||||||||| ||||||      
T  17216596 aagtttatctatttacatcactcaattgattacttaaccttagcaaacatcgctattagaa-tgtttgacaatcatgaaagttcattatagtttttattt 17216498  T
Q  101 --cttttagtctatcgtaaaagataaaatcccaaaacataaccaatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaacc 198  Q
      |||||||| ||||||||||||| ||||||||||| | |||||||||| ||||| || |||||||||  ||||||||||||||||| ||||||||||      
T  17216497 atcttttagtatatcgtaaaagatcaaatcccaaaaaagaaccaatatgatgaattataaaaacaactagttttatatataacacatcgaagatgtaaga 17216398  T
Q  199 aaaagtttattataaataaaagtatcattgg 229  Q
    |||| ||||| ||||||||||||||||||||    
T  17216397 aaaaatttatcataaataaaagtatcattgg 17216367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 106 - 303
Target Start/End: Original strand, 10671816 - 10672009
Alignment:
Q  106 agtctatcgtaaaagataaaatcccaaaacataaccaatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaagtt 205  Q
    |||||||| ||||| |||||||||||||| | || |||||||  |||||||||||||| ||  |||||||||||||||||||| |||||||| |||| ||    
T  10671816 agtctatcctaaaatataaaatcccaaaagaaaatcaatatgacgaatgatgaaaacagctagttttatatataacacattgatgatgtaacaaaaaatt 10671915  T
Q  206 tattataaataaaagtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
    | ||||||    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| | || |||||| ||||    
T  10671916 tgttataa----aagtatcattgggtatttgtttttgttgagaaaattttatattgcagttataacatgtcaatgtggaaattatacgtaatacccat 10672009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 106 - 303
Target Start/End: Original strand, 10885456 - 10885649
Alignment:
Q  106 agtctatcgtaaaagataaaatcccaaaacataaccaatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaagtt 205  Q
    |||||||| ||||| |||||||||||||| | || |||||||  |||||||||||||| ||  |||||||||||||||||||| |||||||| |||| ||    
T  10885456 agtctatcctaaaatataaaatcccaaaagaaaatcaatatgacgaatgatgaaaacagctagttttatatataacacattgatgatgtaacaaaaaatt 10885555  T
Q  206 tattataaataaaagtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
    | ||||||    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| | || |||||| ||||    
T  10885556 tgttataa----aagtatcattgggtatttgtttttgttgagaaaattttatattgcagttataacatgtcaatgtggaaattatacgtaatacccat 10885649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 10717493 - 10717655
Alignment:
Q  141 caatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaagtttattataaataaaagtatcattgggtatttgtttt 240  Q
    ||||||| |||||||| |||||||||  ||||||||||||||||||||||||||||| ||||  || ||||| |||||||||||||||  ||| ||||||    
T  10717493 caatatgatgaatgataaaaacaacttgttttatatataacacattgaagatgtaacaaaaatattgttatatataaaagtatcattgtatatatgtttt 10717592  T
Q  241 tgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
    | ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  10717593 tattgagaaaaatttagattgcagttataacatgtcaatatgaaaattgtatgtaatacccat 10717655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 10931263 - 10931425
Alignment:
Q  141 caatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaagtttattataaataaaagtatcattgggtatttgtttt 240  Q
    ||||||| |||||||| |||||||||  ||||||||||||||||||||||||||||| ||||  || ||||| |||||||||||||||  ||| ||||||    
T  10931263 caatatgatgaatgataaaaacaacttgttttatatataacacattgaagatgtaacaaaaatattgttatatataaaagtatcattgtatatatgtttt 10931362  T
Q  241 tgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
    | ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  10931363 tattgagaaaaatttagattgcagttataacatgtcaatatgaaaattgtatgtaatacccat 10931425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 10682243 - 10682404
Alignment:
Q  141 caatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaagtttattataaataaaagtatcattgggtatttgtttt 240  Q
    ||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||| ||||  || ||||| |||||||||||||||  ||||||||||    
T  10682243 caatatgatgaatgatgaaa-caactagttttatatataacacattgaagatgtaacaaaaacattgttatatataaaagtatcattgtatatttgtttt 10682341  T
Q  241 tgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
      ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| ||||    
T  10682342 aattgagaaaattttagattgcagttataacatgtcaatatggaaattgtatgtaatacccat 10682404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 10895883 - 10896044
Alignment:
Q  141 caatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaagtttattataaataaaagtatcattgggtatttgtttt 240  Q
    ||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||| ||||  || ||||| |||||||||||||||  ||||||||||    
T  10895883 caatatgatgaatgatgaaa-caactagttttatatataacacattgaagatgtaacaaaaacattgttatatataaaagtatcattgtatatttgtttt 10895981  T
Q  241 tgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
      ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| ||||    
T  10895982 aattgagaaaattttagattgcagttataacatgtcaatatggaaattgtatgtaatacccat 10896044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 22067759 - 22067980
Alignment:
Q  3 aagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagattttatct 102  Q
    |||| |||||||||| ||||||| |||||||| ||||||||| | | ||   ||| ||||||| ||||||| |||| |||| ||||||||| |||||| |    
T  22067759 aagtttatctctttatatcactccattgattacttaaccttaacaaacaccgctaataaaaatctttgacagtcataaaagttcattatagtttttattt 22067858  T
Q  103 ----tttagtctatcgtaaaagataaaatcccaaaacataaccaatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaacc 198  Q
        |||||||||||  |||||||||||||| |||  | |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||     
T  22067859 atgttttagtctatccaaaaagataaaatcctaaagaagaaccaatatgatgaatgatgaaaacaactagttttatatataacacattgaagatgtaaca 22067958  T
Q  199 aaaagtttattataaataaaag 220  Q
    || | |||||||||||||||||    
T  22067959 aacaatttattataaataaaag 22067980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 10709399 - 10709237
Alignment:
Q  141 caatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaa-agtttattataaataaaagtatcattgggtatttgttt 239  Q
    ||||||| ||||||||||||||||||  ||||||||||||||  | ||||||||||| ||| |   ||| ||  ||||||||||||||||||||||||||    
T  10709399 caatatgatgaatgatgaaaacaactagttttatatataacatgtcgaagatgtaacaaaataaaatat-atgtataaaagtatcattgggtatttgttt 10709301  T
Q  240 ttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  10709300 ttgttgagaacattttagattgcagttataacatgtcaatgtagaaattgtatgtaatacccat 10709237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 303
Target Start/End: Complemental strand, 10923169 - 10923007
Alignment:
Q  141 caatatgttgaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaa-agtttattataaataaaagtatcattgggtatttgttt 239  Q
    ||||||| ||||||||||||||||||  ||||||||||||||  | ||||||||||| ||| |   ||| ||  ||||||||||||||||||||||||||    
T  10923169 caatatgatgaatgatgaaaacaactagttttatatataacatgtcgaagatgtaacaaaataaaatat-atgtataaaagtatcattgggtatttgttt 10923071  T
Q  240 ttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  10923070 ttgttgagaacattttagattgcagttataacatgtcaatgtagaaattgtatgtaatacccat 10923007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 10666998 - 10667161
Alignment:
Q  141 caatatgttgaatgatgaaaacaactgattttatatat-aacacattgaagatgtaaccaaaagtttat-tataaataaaagtatcattgggtatttgtt 238  Q
    ||||||||||||||||||||||||||  |||||||||| ||||  ||||||||||||| | ||    || |||  |||||||||||||||||||||||||    
T  10666998 caatatgttgaatgatgaaaacaactcgttttatatattaacatgttgaagatgtaac-acaataaaatgtatgtataaaagtatcattgggtatttgtt 10667096  T
Q  239 tttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  10667097 tttgttgagaacattttagattgcagttataacatgtcaatgtagaaattgtatgtaatacccat 10667161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 10881143 - 10881306
Alignment:
Q  141 caatatgttgaatgatgaaaacaactgattttatatat-aacacattgaagatgtaaccaaaagtttat-tataaataaaagtatcattgggtatttgtt 238  Q
    ||||||||||||||||||||||||||  |||||||||| ||||  ||||||||||||| | ||    || |||  |||||||||||||||||||||||||    
T  10881143 caatatgttgaatgatgaaaacaactcgttttatatattaacatgttgaagatgtaac-acaataaaatgtatgtataaaagtatcattgggtatttgtt 10881241  T
Q  239 tttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  10881242 tttgttgagaacattttagattgcagttataacatgtcaatgtagaaattgtatgtaatacccat 10881306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 303
Target Start/End: Original strand, 22068519 - 22068611
Alignment:
Q  211 taaataaaagtatcattgggtatttgtttttgttgagaaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaatagccat 303  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |||| |||||| ||||    
T  22068519 taaataaaagtatcattgagtatttgtttttgttgagtaaattttagtttgcagttataacttgtcaatgtgaaaattgtaagtaatacccat 22068611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 10709508 - 10709416
Alignment:
Q  8 tatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagattttat 100  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||| ||||| | | ||||||| ||||||||| ||||||    
T  10709508 tatctctttacatcactcaattgattacttaaccttagcaaacattgctattaaaaatctttgagagtaatgaaagttcattatagtttttat 10709416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 10923278 - 10923186
Alignment:
Q  8 tatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagattttat 100  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||| ||||| | | ||||||| ||||||||| ||||||    
T  10923278 tatctctttacatcactcaattgattacttaaccttagcaaacattgctattaaaaatctttgagagtaatgaaagttcattatagtttttat 10923186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 10666889 - 10666974
Alignment:
Q  8 tatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatag 93  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||| ||||| |   ||||||| |||||||||    
T  10666889 tatctctttacatcactcaattgattacttaaccttagcaaacattgctattaaaaatctttgagataaatgaaagttcattatag 10666974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 10881034 - 10881119
Alignment:
Q  8 tatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatag 93  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||| ||||| |   ||||||| |||||||||    
T  10881034 tatctctttacatcactcaattgattacttaaccttagcaaacattgctattaaaaatctttgagataaatgaaagttcattatag 10881119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 10682128 - 10682223
Alignment:
Q  3 aagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagatttt 98  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||| | |||  ||||||||||| ||| ||||| ||||||  ||||||||| ||||    
T  10682128 aagtttatctctttgcatcactcaattgattacttaaccttagcaaacatcgctattaaaaatctttcacaataatgaaaattcattatagttttt 10682223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 10895768 - 10895863
Alignment:
Q  3 aagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagatttt 98  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||| | |||  ||||||||||| ||| ||||| ||||||  ||||||||| ||||    
T  10895768 aagtttatctctttgcatcactcaattgattacttaaccttagcaaacatcgctattaaaaatctttcacaataatgaaaattcattatagttttt 10895863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 10717380 - 10717476
Alignment:
Q  3 aagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagattttat 100  Q
    |||| |||| |||||||||||||||| ||||| ||||||||||| | |||   |||||||||| ||||||||| || |||| ||||||||| ||||||    
T  10717380 aagtttatccctttacatcactcaat-gattacttaaccttagcaaacatcgttattaaaaatctttgacaataataaaagctcattatagtttttat 10717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 10931150 - 10931246
Alignment:
Q  3 aagtgtatctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagattttat 100  Q
    |||| |||| |||||||||||||||| ||||| ||||||||||| | |||   |||||||||| ||||||||| || |||| ||||||||| ||||||    
T  10931150 aagtttatccctttacatcactcaat-gattacttaaccttagcaaacatcgttattaaaaatctttgacaataataaaagctcattatagtttttat 10931246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 29157427 - 29157359
Alignment:
Q  312 ttgttctggaccgatcagaagaccaaacacaagttaacacatggtataacttacatcgccttaaggctc 380  Q
    |||||||||| |||| |||||| ||| |||| ||| ||||||||||||||||||| || ||||||||||    
T  29157427 ttgttctggatcgattagaagatcaaccacatgttgacacatggtataacttacaccgacttaaggctc 29157359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 22198474 - 22198424
Alignment:
Q  248 aaaattttagattgcagttataacatgtcaatgtgaaaactgtatgtaata 298  Q
    ||||||||| ||| |||||||| ||| |||||||||||| |||||||||||    
T  22198474 aaaattttatattacagttatagcatatcaatgtgaaaattgtatgtaata 22198424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 8344 - 8445
Alignment:
Q  311 tttgttctggaccgatcagaagaccaaacacaagttaacacatggtataacttacatcgccttaaggctctgtgtctgaggggacacgccaactcgagtg 410  Q
    |||||||| ||||  |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||||||| ||||| |||||||| ||| ||||    
T  8344 tttgttctagacctttcagaagaccaatcacacgttaacacgtggtataacctacatcgccttaaggctctgtgtcagagggaacacgccagctcaagtg 8443  T
Q  411 ca 412  Q
    ||    
T  8444 ca 8445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 150 - 273
Target Start/End: Original strand, 19898827 - 19898949
Alignment:
Q  150 gaatgatgaaaacaactgattttatatataacacattgaagatgtaaccaaaagtttattataaataaaagtatcattgggtatttgtttttgttgagaa 249  Q
    ||||||| |||||| ||  ||||||||||||||||||||||| ||||| |||| |||||||||||||||| |||| || ||||||| | ||| |||||||    
T  19898827 gaatgataaaaacagctagttttatatataacacattgaagacgtaacaaaaa-tttattataaataaaaatatctttaggtatttttcttttttgagaa 19898925  T
Q  250 aattttagattgcagttataacat 273  Q
    |||||||| || || |||||||||    
T  19898926 aattttaggttacaattataacat 19898949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 133
Target Start/End: Original strand, 19898648 - 19898775
Alignment:
Q  9 atctctttacatcactcaattgattatttaaccttagcgagcatttctattaaaaatatttgacaatcatgaaagatcattatagat----tttatcttt 104  Q
    |||||||||||||| ||||||||||| ||||||||| | | |||  ||| ||||| | | ||||| ||||||||||||||||||  |    |||||||||    
T  19898648 atctctttacatcaatcaattgattacttaaccttaacaaacatggctagtaaaa-tctatgacattcatgaaagatcattataatttttatttatcttt 19898746  T
Q  105 tagtctatcgtaaaagataaaatcccaaa 133  Q
     |||||||| |||||||||||||||||||    
T  19898747 aagtctatcataaaagataaaatcccaaa 19898775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 409
Target Start/End: Complemental strand, 3586690 - 3586593
Alignment:
Q  313 tgttctggaccgatcagaagaccaaacacaagttaacacatggtat-aacttacatcgccttaaggctctgtgtctgaggggacacgccaactcgagt 409  Q
    |||||||||||| | |||||||||| |||| |||||||| ||| || ||||||||||| |||||||||| | |  |||||| |||||||| |||||||    
T  3586690 tgttctggaccggttagaagaccaatcacacgttaacacgtggcataaacttacatcgtcttaaggctccgcgcttgagggaacacgccagctcgagt 3586593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 375
Target Start/End: Original strand, 10922932 - 10922992
Alignment:
Q  315 ttctggaccgatcagaagaccaaacacaagttaacacatggtataacttacatcgccttaa 375  Q
    ||||||||||||||||||||||| |||| || ||||||||  | |||||||||||||||||    
T  10922932 ttctggaccgatcagaagaccaatcacacgtcaacacatgacacaacttacatcgccttaa 10922992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 415
Target Start/End: Complemental strand, 24500114 - 24500009
Alignment:
Q  310 ttttgttctggaccgatcagaagaccaaacacaagttaacacatggtataacttacatcgccttaaggctctgtgtctgaggggacacgccaactcgagt 409  Q
    ||||||||| ||| | |||||||||||| |||| ||| |||| | | |||||||||| || ||||||||||||   |||| |  ||||| |||||| |||    
T  24500114 ttttgttcttgactggtcagaagaccaatcacatgttgacacgtagcataacttacaccgacttaaggctctgctcctgaagaaacacgtcaactcaagt 24500015  T
Q  410 gcaccg 415  Q
    ||||||    
T  24500014 gcaccg 24500009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 404
Target Start/End: Original strand, 17143517 - 17143605
Alignment:
Q  316 tctggaccgatcagaagaccaaacacaagttaacacatggtataacttacatcgccttaaggctctgtgtctgaggggacacgccaact 404  Q
    ||||||||| ||||||||||||  ||| |||||||| ||  |||||||||| ||||||||||||||| ||||||||| |||| ||||||    
T  17143517 tctggaccggtcagaagaccaattacacgttaacacgtgacataacttacaccgccttaaggctctgcgtctgagggaacacaccaact 17143605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 414
Target Start/End: Original strand, 26762684 - 26762777
Alignment:
Q  321 accgatcagaagaccaaacacaagttaacacatggtataacttacatcgccttaaggctctgtgtctgaggggacacgccaactcgagtgcacc 414  Q
    |||| ||| |||||||| |||| ||| |||| |||| ||||||||| ||||||||||||| |  |||||||| |||||||||||| ||||||||    
T  26762684 accggtcataagaccaatcacacgttgacacgtggtctaacttacaccgccttaaggctcagcctctgagggaacacgccaactcaagtgcacc 26762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 32418251 - 32418350
Alignment:
Q  313 tgttctggaccgatcagaagaccaaacacaagttaacacatggtataacttacatcgccttaaggctctgtgtctgaggggacacgccaactcgagtgca 412  Q
    |||||||||||| | |||||||||| | || ||| |||| ||  |||||||||| |||||||||||| ||||| |||||  ||||| ||||| |||||||    
T  32418251 tgttctggaccggtgagaagaccaatcgcacgttgacacgtgacataacttacaccgccttaaggctttgtgtatgaggaaacacgtcaacttgagtgca 32418350  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 11087831 - 11087762
Alignment:
Q  312 ttgttctggaccgatcagaagaccaaacacaagttaacacatggtat-aacttacatcgccttaaggctc 380  Q
    ||||||||||||| |||||||||||| |||| |||||||| ||| || |||||||| || ||||||||||    
T  11087831 ttgttctggaccggtcagaagaccaatcacacgttaacacgtggcataaacttacaccgtcttaaggctc 11087762  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 351
Target Start/End: Complemental strand, 23001029 - 23000986
Alignment:
Q  308 ttttttgttctggaccgatcagaagaccaaacacaagttaacac 351  Q
    ||||||||||||||||||| |||||||||| |||| ||||||||    
T  23001029 ttttttgttctggaccgataagaagaccaatcacacgttaacac 23000986  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 351
Target Start/End: Original strand, 23787375 - 23787418
Alignment:
Q  308 ttttttgttctggaccgatcagaagaccaaacacaagttaacac 351  Q
    ||||||||||||||||||| |||||||||| |||| ||||||||    
T  23787375 ttttttgttctggaccgataagaagaccaatcacacgttaacac 23787418  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 422
Target Start/End: Complemental strand, 33597144 - 33597079
Alignment:
Q  357 ataacttacatcgccttaaggctctgtgtctgaggggacacgccaactcgagtgcaccgtgacaca 422  Q
    |||||||||| | ||||||||||| | | ||||||| |||||||||||| ||||| ||||| ||||    
T  33597144 ataacttacaccaccttaaggctccgcgcctgagggaacacgccaactcaagtgctccgtgccaca 33597079  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 5860143 - 5860065
Alignment:
Q  311 tttgttctggaccgatcagaagaccaaacacaagttaacacatggtataacttacatcgccttaaggctctgtgtctga 389  Q
    |||||||| |||||||||||||||||| || | ||| |||||||   ||||||||| |||||||| |||| | ||||||    
T  5860143 tttgttcttgaccgatcagaagaccaatcatacgttgacacatgtcctaacttacaccgccttaaagctccgcgtctga 5860065  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 7222220 - 7222154
Alignment:
Q  312 ttgttctggaccgatcagaagaccaaacacaagttaacacatggtataacttacatcgccttaaggctc 380  Q
    |||||||| |||| |||||| ||||| |||| |||||||| |||||| ||  |||||||||||||||||    
T  7222220 ttgttctgaaccggtcagaataccaatcacacgttaacacgtggtatgac--acatcgccttaaggctc 7222154  T

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