View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14828_high_1 (Length: 459)
Name: NF14828_high_1
Description: NF14828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14828_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 439; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 1 - 455
Target Start/End: Complemental strand, 40174229 - 40173775
Alignment:
| Q |
1 |
ctcgaaagcacttttagcgagtcattgcatatacaagatactgagaaatctgagcatttgtctgaggggggtgcgatgtgcaatgtaggcaaggaaaact |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
40174229 |
ctcgaaagcacttttagcgagtcattgcatatacaagatactgagaaatctgagcatttgtctgagggggatgcgatgtgcaatgtaggcaaggaaaact |
40174130 |
T |
|
| Q |
101 |
taagtggggttaataaacagaaaaaatcaaaacctaacaaggtgtgtttgaataaatctgcaacctttccaactcctcatgtgatgttgccttcaagctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40174129 |
taagtggggttaataaacagaaaaaatcaaaacctaacaaggtgtgtttgaataaatctgcaacctttccaactcctcatgtgatgttgccttcaagctc |
40174030 |
T |
|
| Q |
201 |
ttctgacgaggacgctgattcatccgttacagaatcacttaatgagcattctgctcatcaagcttactctcgttcgatatctctgcctgtaagtttttca |
300 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40174029 |
ttctgacgaggatgctgattcatccgttacagaatcacttaatgagcattctgctcatcaagcttactctcgttcgatatctctgcctgtaagtttttca |
40173930 |
T |
|
| Q |
301 |
tgttacgatgttggtgttaatgatgtttatgtgtattggtttcaagcaattatgcttcttaatttctattttgaaaaggctgccgttttacctcaataat |
400 |
Q |
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|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40173929 |
tgttacgatgttggagttaatgatgtttatgtgtattggtttcaagcaattatgcttcttaatttctattttgaaaaggctgccgttttacctcaataat |
40173830 |
T |
|
| Q |
401 |
tggtttcttattccatctgtggtattgatttgttggtctattaattgatgatgtc |
455 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
40173829 |
tggtttcttattccatctgtggtattgatttgttggtctattaattgatgctgtc |
40173775 |
T |
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