View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14828_low_7 (Length: 245)
Name: NF14828_low_7
Description: NF14828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14828_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 11 - 230
Target Start/End: Original strand, 11420578 - 11420797
Alignment:
| Q |
11 |
catcatcatggaatggtgttctttgtaatggtggtaatgttgctggtgttgtccttgataacttaggtctctctgctgattctgatttgagtgttttttc |
110 |
Q |
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| T |
11420578 |
catcttcatggaatggtgttctttgtaatggtggtaatgttgctggtgttgtccttgataacttaggtctctctgctgattctgatttgagtgttttttc |
11420677 |
T |
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| Q |
111 |
aaacctctcaaagcttgtgaaactttccatgtccaacaattccatatcgggaaaattaccaaataacattgccgatttcaaaagccttgaatttcttgat |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11420678 |
aaacctctcaaagcttgtgaaactttccatgtccaacaattccatatcgggaaaattaccaaataacattgccgatttcaaaagccttgaatttcttgat |
11420777 |
T |
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| Q |
211 |
atttccaataacctcttttc |
230 |
Q |
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|||||||||||||||||||| |
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| T |
11420778 |
atttccaataacctcttttc |
11420797 |
T |
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