View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14829_low_1 (Length: 471)
Name: NF14829_low_1
Description: NF14829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14829_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 432; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 15 - 462
Target Start/End: Original strand, 1767412 - 1767859
Alignment:
| Q |
15 |
gaaaatcctttgtttgcaaattgtcattttcagagatgatgaagattttaggcaccattccattgttttcatttgtaacagttgtttgtttcatcaataa |
114 |
Q |
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| T |
1767412 |
gaaaatcctttgtttgcaaattgtcattttcagagatgatgaagattttaggcaccattccattgttttcatttgtaacagttgtttgtttcatcaataa |
1767511 |
T |
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| Q |
115 |
atcagcatcgctcaaaaagggaggtaaaggtctcactagagataaagcaagtgtcaaatcctgcatatagaaattgaatttgctttaattaagtattaat |
214 |
Q |
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| T |
1767512 |
atcagcatcgctcaaaaagggaggtaaaggtctcactagagataaagcaagtgtcaaatcctgcatatagaaattgaatttgccttaattaagtattaat |
1767611 |
T |
|
| Q |
215 |
aataatcaatataaatcatatttacattatagattacataaacattagctaaaaatcaaatcaaaatacataatatgaatttgatttttctattttgtcc |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
1767612 |
aataatcaatataaatcatatttacattatagattacataaacattagctaaaaatcaaatcaaaatacataatatgagtttgatttttctattttgtcc |
1767711 |
T |
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| Q |
315 |
aattgataaaactatttacttgagatggtgataattggtacattctggatgctaacaaatcaagtccgtcagacgagaggatcggagccttgtctggccc |
414 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
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| T |
1767712 |
aattgataaaactatttacttgagatggtgataattggtacattctggatgctaacaaatcaagtccgttagacgagaggatcggagctttgtctggccc |
1767811 |
T |
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| Q |
415 |
gttaacgatgaaattttgtttgtccaaaattgagcccactcttctcct |
462 |
Q |
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| T |
1767812 |
gttaacgatgaaattttgtttgtccaaaattgagcccactcttctcct |
1767859 |
T |
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