View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1482R-Insertion-3 (Length: 71)

Name: NF1482R-Insertion-3
Description: NF1482R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1482R-Insertion-3
NF1482R-Insertion-3
[»] chr4 (1 HSPs)
chr4 (9-71)||(3041351-3041413)


Alignment Details
Target: chr4 (Bit Score: 59; Significance: 1e-25; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 3041351 - 3041413
Alignment:
9 attttctggtcaccggaacctccattttcttccccgccaccgtcaatctcggagaacatcctc 71  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
3041351 attttctggtcaccggaacctccattttcttcctcgccaccgtcaatctcggagaacatcctc 3041413  T

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