View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1482_low_17 (Length: 302)

Name: NF1482_low_17
Description: NF1482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1482_low_17
NF1482_low_17
[»] scaffold0139 (2 HSPs)
scaffold0139 (13-288)||(23284-23545)
scaffold0139 (246-288)||(40204-40246)
[»] chr1 (23 HSPs)
chr1 (105-287)||(22145708-22145892)
chr1 (116-288)||(8306444-8306617)
chr1 (125-208)||(7052132-7052215)
chr1 (116-217)||(17901913-17902014)
chr1 (116-208)||(24723579-24723672)
chr1 (125-217)||(21239154-21239245)
chr1 (116-217)||(6834006-6834110)
chr1 (116-208)||(21188152-21188245)
chr1 (122-218)||(35894946-35895041)
chr1 (138-217)||(21243848-21243926)
chr1 (145-208)||(44822249-44822312)
chr1 (220-273)||(14294866-14294920)
chr1 (246-288)||(28476775-28476817)
chr1 (246-288)||(38056713-38056755)
chr1 (246-288)||(50544841-50544883)
chr1 (220-273)||(51131316-51131370)
chr1 (116-208)||(22350510-22350602)
chr1 (114-184)||(38056816-38056887)
chr1 (246-288)||(12710836-12710878)
chr1 (246-288)||(24719551-24719593)
chr1 (116-169)||(45574176-45574230)
chr1 (117-169)||(23194669-23194722)
chr1 (117-184)||(8276133-8276201)
[»] scaffold0679 (1 HSPs)
scaffold0679 (13-123)||(1662-1772)
[»] chr6 (17 HSPs)
chr6 (13-123)||(28709431-28709541)
chr6 (106-184)||(25921832-25921910)
chr6 (116-217)||(29045104-29045205)
chr6 (122-214)||(25601439-25601531)
chr6 (166-288)||(18982461-18982583)
chr6 (143-208)||(35057412-35057477)
chr6 (114-169)||(13765186-13765242)
chr6 (114-169)||(23956702-23956758)
chr6 (114-169)||(31021878-31021934)
chr6 (125-208)||(13285598-13285681)
chr6 (145-208)||(18459176-18459239)
chr6 (145-208)||(18585549-18585612)
chr6 (116-214)||(24506228-24506327)
chr6 (246-288)||(15998858-15998900)
chr6 (246-288)||(19825527-19825569)
chr6 (117-184)||(19825630-19825698)
chr6 (125-169)||(23226014-23226058)
[»] scaffold0007 (4 HSPs)
scaffold0007 (140-288)||(16460-16609)
scaffold0007 (140-288)||(18742-18892)
scaffold0007 (116-208)||(158988-159080)
scaffold0007 (116-208)||(18979-19072)
[»] chr3 (21 HSPs)
chr3 (117-288)||(29907477-29907650)
chr3 (117-288)||(29948643-29948816)
chr3 (117-288)||(29997797-29997970)
chr3 (13-95)||(5842738-5842820)
chr3 (125-194)||(12917446-12917515)
chr3 (116-208)||(6805046-6805139)
chr3 (116-208)||(48631172-48631265)
chr3 (248-288)||(14641589-14641629)
chr3 (145-288)||(3160667-3160808)
chr3 (246-288)||(14520415-14520457)
chr3 (114-169)||(42367-42423)
chr3 (125-217)||(45803448-45803539)
chr3 (114-169)||(46722743-46722799)
chr3 (114-169)||(55291758-55291814)
chr3 (116-194)||(13522481-13522560)
chr3 (246-288)||(17208493-17208535)
chr3 (116-169)||(43549812-43549866)
chr3 (116-184)||(14641692-14641761)
chr3 (26-78)||(3592993-3593044)
chr3 (114-169)||(10555146-10555202)
chr3 (114-169)||(18890263-18890319)
[»] chr4 (14 HSPs)
chr4 (116-274)||(35660728-35660888)
chr4 (116-287)||(16296711-16296883)
chr4 (116-208)||(14549490-14549583)
chr4 (116-208)||(19434778-19434871)
chr4 (246-288)||(14631104-14631146)
chr4 (114-169)||(28386083-28386139)
chr4 (114-184)||(9638847-9638918)
chr4 (145-208)||(14477502-14477565)
chr4 (246-288)||(16296907-16296949)
chr4 (116-169)||(18230582-18230636)
chr4 (246-288)||(25513820-25513862)
chr4 (151-208)||(18462899-18462956)
chr4 (114-169)||(16277444-16277500)
chr4 (114-169)||(53387054-53387110)
[»] chr7 (23 HSPs)
chr7 (13-95)||(11391139-11391221)
chr7 (116-218)||(13315191-13315293)
chr7 (116-208)||(12754784-12754877)
chr7 (117-218)||(19282887-19282988)
chr7 (125-218)||(38295452-38295544)
chr7 (139-208)||(47975010-47975079)
chr7 (126-208)||(14274074-14274156)
chr7 (116-208)||(708640-708733)
chr7 (117-225)||(37539289-37539397)
chr7 (125-208)||(42565951-42566034)
chr7 (220-273)||(16496153-16496207)
chr7 (116-204)||(19195032-19195121)
chr7 (114-169)||(14105584-14105640)
chr7 (114-169)||(14415601-14415657)
chr7 (114-184)||(17070433-17070504)
chr7 (246-288)||(708470-708512)
chr7 (116-169)||(4325937-4325991)
chr7 (254-288)||(8513794-8513828)
chr7 (246-288)||(15575690-15575732)
chr7 (246-288)||(19195581-19195622)
chr7 (246-288)||(43745625-43745667)
chr7 (114-169)||(14188450-14188506)
chr7 (125-169)||(44190373-44190417)
[»] chr2 (18 HSPs)
chr2 (116-236)||(149598-149718)
chr2 (122-287)||(28652593-28652756)
chr2 (116-208)||(1383771-1383864)
chr2 (138-218)||(23801356-23801435)
chr2 (116-208)||(19647074-19647167)
chr2 (127-208)||(45535778-45535859)
chr2 (116-208)||(18388356-18388448)
chr2 (145-205)||(45535666-45535726)
chr2 (116-201)||(28345162-28345248)
chr2 (117-173)||(14183620-14183677)
chr2 (116-191)||(36734588-36734664)
chr2 (145-208)||(24884231-24884294)
chr2 (246-288)||(21315517-21315559)
chr2 (246-288)||(21335307-21335349)
chr2 (140-217)||(12626543-12626619)
chr2 (125-173)||(14179882-14179930)
chr2 (114-169)||(21072845-21072901)
chr2 (125-169)||(41301086-41301130)
[»] scaffold0026 (2 HSPs)
scaffold0026 (116-208)||(21962-22055)
scaffold0026 (162-208)||(9912-9958)
[»] chr5 (15 HSPs)
chr5 (116-208)||(36508862-36508955)
chr5 (246-288)||(16063720-16063762)
chr5 (145-208)||(17875927-17875990)
chr5 (125-208)||(21503989-21504072)
chr5 (114-169)||(27868731-27868787)
chr5 (249-288)||(6551331-6551370)
chr5 (145-208)||(31456721-31456784)
chr5 (246-288)||(18744843-18744885)
chr5 (116-169)||(33472720-33472774)
chr5 (220-273)||(36315304-36315358)
chr5 (122-194)||(21398931-21399003)
chr5 (114-169)||(24594220-24594276)
chr5 (114-169)||(24668314-24668370)
chr5 (114-169)||(24738083-24738139)
chr5 (114-169)||(24750852-24750908)
[»] scaffold0594 (1 HSPs)
scaffold0594 (138-217)||(2103-2181)
[»] scaffold0676 (2 HSPs)
scaffold0676 (116-236)||(2654-2774)
scaffold0676 (246-288)||(2850-2892)
[»] scaffold0149 (1 HSPs)
scaffold0149 (139-208)||(21404-21473)
[»] scaffold0148 (1 HSPs)
scaffold0148 (116-218)||(8681-8783)
[»] scaffold0021 (2 HSPs)
scaffold0021 (126-288)||(16958-17117)
scaffold0021 (126-288)||(26489-26648)
[»] scaffold0004 (1 HSPs)
scaffold0004 (129-204)||(66202-66277)
[»] scaffold0040 (1 HSPs)
scaffold0040 (116-208)||(106280-106373)
[»] scaffold0256 (1 HSPs)
scaffold0256 (126-184)||(1984-2042)
[»] scaffold0217 (1 HSPs)
scaffold0217 (127-208)||(28566-28647)
[»] chr8 (14 HSPs)
chr8 (116-208)||(20517175-20517268)
chr8 (127-208)||(20879325-20879406)
chr8 (138-217)||(12037275-12037353)
chr8 (145-208)||(22344993-22345056)
chr8 (145-208)||(22356653-22356716)
chr8 (246-288)||(4380658-4380700)
chr8 (246-288)||(18816336-18816378)
chr8 (246-288)||(21514660-21514702)
chr8 (114-169)||(8413905-8413961)
chr8 (114-169)||(19882787-19882843)
chr8 (145-205)||(21676713-21676773)
chr8 (116-208)||(42265675-42265767)
chr8 (125-208)||(22483630-22483713)
chr8 (246-288)||(36732453-36732495)
[»] scaffold0730 (1 HSPs)
scaffold0730 (116-218)||(6614-6716)
[»] scaffold0439 (1 HSPs)
scaffold0439 (116-194)||(12081-12160)
[»] scaffold0369 (1 HSPs)
scaffold0369 (246-285)||(15659-15698)
[»] scaffold1256 (1 HSPs)
scaffold1256 (246-288)||(2241-2283)
[»] scaffold1186 (1 HSPs)
scaffold1186 (246-288)||(1989-2031)
[»] scaffold0231 (1 HSPs)
scaffold0231 (246-288)||(17562-17604)
[»] scaffold0184 (1 HSPs)
scaffold0184 (220-273)||(385-439)
[»] scaffold0005 (1 HSPs)
scaffold0005 (246-288)||(186237-186279)
[»] scaffold0125 (1 HSPs)
scaffold0125 (122-288)||(28399-28563)
[»] scaffold0092 (1 HSPs)
scaffold0092 (152-208)||(38561-38617)
[»] scaffold0061 (2 HSPs)
scaffold0061 (229-288)||(14627-14687)
scaffold0061 (229-288)||(23685-23745)
[»] scaffold0878 (1 HSPs)
scaffold0878 (246-285)||(3466-3505)
[»] scaffold0337 (1 HSPs)
scaffold0337 (116-214)||(3045-3144)
[»] scaffold0230 (1 HSPs)
scaffold0230 (145-208)||(6913-6976)
[»] scaffold0213 (2 HSPs)
scaffold0213 (125-200)||(18965-19040)
scaffold0213 (246-288)||(19176-19218)
[»] scaffold0516 (1 HSPs)
scaffold0516 (246-288)||(5346-5388)
[»] scaffold0364 (1 HSPs)
scaffold0364 (116-169)||(8005-8059)
[»] scaffold0247 (1 HSPs)
scaffold0247 (246-288)||(1045-1087)
[»] scaffold0203 (1 HSPs)
scaffold0203 (246-288)||(17981-18023)
[»] scaffold0113 (1 HSPs)
scaffold0113 (125-207)||(35342-35424)
[»] scaffold0056 (1 HSPs)
scaffold0056 (246-288)||(18244-18286)
[»] scaffold0180 (1 HSPs)
scaffold0180 (151-208)||(28495-28552)
[»] scaffold0017 (1 HSPs)
scaffold0017 (127-208)||(23465-23546)
[»] scaffold0001 (2 HSPs)
scaffold0001 (114-162)||(169279-169328)
scaffold0001 (114-162)||(176632-176681)
[»] scaffold1800 (1 HSPs)
scaffold1800 (116-208)||(446-541)
[»] scaffold0308 (1 HSPs)
scaffold0308 (116-208)||(13234-13326)
[»] scaffold0220 (1 HSPs)
scaffold0220 (246-286)||(13918-13958)
[»] scaffold0151 (1 HSPs)
scaffold0151 (125-169)||(9946-9990)
[»] scaffold0116 (1 HSPs)
scaffold0116 (116-208)||(35630-35722)
[»] scaffold0058 (1 HSPs)
scaffold0058 (125-169)||(39969-40013)


Alignment Details
Target: scaffold0139 (Bit Score: 155; Significance: 3e-82; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 13 - 288
Target Start/End: Original strand, 23284 - 23545
Alignment:
Q  13 agcagcacagagtacacaaatttaacattgaattaatcaaaagatcatgaaaagcaatggaaaacaaaacccaacaccacccacatgagtacacaaccct 112  Q
    |||||||||| |||||  |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  23284 agcagcacag-gtacatgaatttaacattgaatttatcaaaagatcatgaaaagcgatggaaaacaaaacccaaaactacccacatgagtacacaaccct 23382  T
Q  113 taccccaaatttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaa 212  Q
    |||||||||||||||||||||| |||||||||||||| |||||  |||||| ||||||||||||            |||||| | |||||||||||||||    
T  23383 taccccaaatttataggaaactcttcctatgattattctacaatttgaaca-caattattacct------------ttacctactctttcaacaattcaa 23469  T
Q  213 ttttaaattctaacattaatttctctaatcctcaaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  23470 ttttaaattctaaccttaatttctctaatcctcaaactaacaacaactgcaaggtttaacccctttttagatttat 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 40246 - 40204
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||| ||||||||||| |||||||||| |||||||||||||    
T  40246 aaactatcaacaactacatggttaaacccttttttagaattat 40204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 105 - 287
Target Start/End: Complemental strand, 22145892 - 22145708
Alignment:
Q  105 acaacccttaccccaaattta-taggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttca 203  Q
    |||||||| |||||||||||  ||| ||||| | |||||||||| | |||||| |||||| |||||||||| ||||||||||||||||||| | | ||||    
T  22145892 acaaccctaaccccaaattttgtagaaaactctacctatgattaatctacaacttgaacatcaattattactttaattcattggattacctactccttca 22145793  T
Q  204 acaattcaattttaaattctaacattaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacccctttttagaatta 287  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  22145792 acaattcaattttaatttctaaccttaatttatctaatcctcaaacctaacaacaactacaaggttaaaccctttttcagaatta 22145708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 288
Target Start/End: Original strand, 8306444 - 8306617
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| |||||||||||  ||||||||||||  |||| |||||||||||||||||||||||||||| ||||||||| | |||||||||| ||||||    
T  8306444 cccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaa-tcaatt 8306542  T
Q  215 ttaaattctaacattaatttctctaatcctc-aaactaacaacaactaca--aggttaaacccctttttagaattat 288  Q
    |||| ||| |||  |||||||| ||| | || |||||||||| ||| |||  | |||||||||||||||||||||||    
T  8306543 ttaatttcaaaccctaatttctataa-catcaaaactaacaa-aacgacaacatgttaaacccctttttagaattat 8306617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 7052215 - 7052132
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | |||||||||||    
T  7052215 ataggaaacttaacctatgattattttacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 7052132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 17902014 - 17901913
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| |||| ||||| | |||||||||||| |||||||||||||||||||||||||||| ||||| |||||| || | |||||||||| ||||||    
T  17902014 cccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattatctactctttcaacaa-tcaatt 17901916  T
Q  215 tta 217  Q
    |||    
T  17901915 tta 17901913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 24723672 - 24723579
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||   ||||| | | |||||||||||    
T  24723672 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattaccttaattcatcatattacatactctttcaacaat 24723579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 21239245 - 21239154
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatttta 217  Q
    |||| ||||| | |||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||||| | |||||||||| |||||||||    
T  21239245 atagaaaactctacctatgattattctacaaactgaacaccaattattaccttagttcatcggattacctactctttcaacaa-tcaatttta 21239154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 6834006 - 6834110
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaat---tcattggattacctgcactttcaacaattca 211  Q
    ||||||||| |||| ||||| | |||||||||||| |||||||||||||||||||||||||||| |   |||| ||||||||| | |||||||||| |||    
T  6834006 cccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcatcggattacctactctttcaacaa-tca 6834104  T
Q  212 atttta 217  Q
    ||||||    
T  6834105 atttta 6834110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 21188245 - 21188152
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| ||||||||| || | |||  ||||| ||||||||||||| ||||| |||  ||||||||||||||||||| |||||||||||||    
T  21188245 cccaaatttgataggaaacattacatattcttattctacaacctgaacatcaatttttatattaattcattggattacctacactttcaacaat 21188152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 35894946 - 35895041
Alignment:
Q  122 tttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattttaa 218  Q
    ||||||| ||||| ||| ||||||||||  || |||||||||||||||||||||||| ||||| ||||||||    |||||||||| ||||||||||    
T  35894946 tttatagaaaactcttcatatgattattccaccacctgaacaccaattattaccttacttcatcggattaccaattctttcaacaa-tcaattttaa 35895041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 21243926 - 21243848
Alignment:
Q  138 cctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatttta 217  Q
    |||||||||||| ||||||||||||||||||||||| | |||||||| |||||| || | ||||| |||| |||||||||    
T  21243926 cctatgattattctacaacctgaacaccaattattaacctaattcatcggattatctactctttctacaa-tcaatttta 21243848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 44822312 - 44822249
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| ||||||||||||| |||||  ||  ||||||||||||||||||| |||||||||||||    
T  44822312 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 44822249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 14294920 - 14294866
Alignment:
Q  220 ttctaacattaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacc 273  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||||||||||    
T  14294920 ttctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaacc 14294866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 28476817 - 28476775
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  28476817 aaactaacaacaactacaaggttaaaccctttttcagaattat 28476775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 38056755 - 38056713
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  38056755 aaactaacaacaactacaaggttaaaccctttttcagaattat 38056713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 50544841 - 50544883
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  50544841 aaactaacaacaactacaaggttaaaccctttttcagaattat 50544883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 51131316 - 51131370
Alignment:
Q  220 ttctaacattaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacc 273  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||||||||||    
T  51131316 ttctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaacc 51131370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 22350510 - 22350602
Alignment:
Q  116 cccaaatttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||| ||||||||| |  | ||| |||| | ||||||||||||| ||||| |||  ||||||||||| ||||||| ||| |||||||||    
T  22350510 cccaaattgataggaaacctcacttattattactctacaacctgaacatcaatttttatattaattcattgaattacctacaccttcaacaat 22350602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 38056887 - 38056816
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcat 184  Q
    ||||||||||| |||||||||||  |||||||||| | | |||| || ||||||||||||||| ||||||||    
T  38056887 accccaaatttgataggaaacttaacctatgattaatctgcaacttggacaccaattattaccctaattcat 38056816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 12710836 - 12710878
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||||||||||||||||| |||||||| |||| ||||||||    
T  12710836 aaactaacaacaactacaagattaaaccctttttcagaattat 12710878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 24719593 - 24719551
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  24719593 aaactaataacaactacaaggttaaaccctttttcagaattat 24719551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 45574230 - 45574176
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  45574230 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 45574176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 23194722 - 23194669
Alignment:
Q  117 ccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    |||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  23194722 ccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 23194669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 8276201 - 8276133
Alignment:
Q  117 ccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcat 184  Q
    |||||||| |||||||||||  |||||||||| | | |||| || ||||||||||||||| ||||||||    
T  8276201 ccaaatttgataggaaacttaacctatgattaatctgcaacttggacaccaattattaccctaattcat 8276133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 1772 - 1662
Alignment:
Q  13 agcagcacagagtacacaaatttaacattgaattaatcaaaagatcatgaaaagcaatggaaaacaaaacccaacaccacccacatgagtacacaaccct 112  Q
    |||||||||  |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1772 agcagcacaaggtacacgaatttaacattgaatttatcaaaggatcatgaaaagcaatggaaaacaaaacccaacactacccacatgagtacacaaccct 1673  T
Q  113 taccccaaatt 123  Q
     | ||||||||    
T  1672 aatcccaaatt 1662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 6e-37; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 28709431 - 28709541
Alignment:
Q  13 agcagcacagagtacacaaatttaacattgaattaatcaaaagatcatgaaaagcaatggaaaacaaaacccaacaccacccacatgagtacacaaccct 112  Q
    |||||||||  |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28709431 agcagcacaaggtacacgaatttaacattgaatttatcaaaggatcatgaaaagcaatggaaaacaaaacccaacactacccacatgagtacacaaccct 28709530  T
Q  113 taccccaaatt 123  Q
     | ||||||||    
T  28709531 aatcccaaatt 28709541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 25921832 - 25921910
Alignment:
Q  106 caacccttaccccaaatttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcat 184  Q
    ||||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  25921832 caaccctaacccaaaatttatagaaaacttttcctatgattattctacaacctgaacaccaatcattaccttaattcat 25921910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 29045104 - 29045205
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| |||| ||||| | |||||||||||| ||||||||||||| |||||||||||||| ||||| ||||||||| | |||||||||| ||||||    
T  29045104 cccaaatttgatagaaaactctacctatgattattctacaacctgaacatcaattattaccttagttcatcggattacctactctttcaacaa-tcaatt 29045202  T
Q  215 tta 217  Q
    |||    
T  29045203 tta 29045205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 25601531 - 25601439
Alignment:
Q  122 tttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||| ||| | |||||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||| | |||| ||||||| ||||    
T  25601531 tttatagaaaattcttcctatgattattatacaacatgaacatcaattattaccttaattctttggattacctactcttttaacaattaaatt 25601439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 288
Target Start/End: Original strand, 18982461 - 18982583
Alignment:
Q  166 aattattaccttaattcattggattacctgcactttcaacaattcaattttaaattctaacattaatttctctaatcctcaaac-taacaacaactacaa 264  Q
    |||||||||  ||||||||   ||||||| | |||||| ||| |||||||||| |||||||  |||||||||||||| |||||| || ||||||||||||    
T  18982461 aattattactctaattcatcatattacctactctttcaccaaatcaattttaa-ttctaaccctaatttctctaatcatcaaacctagcaacaactacaa 18982559  T
Q  265 ggttaaacccctttttagaattat 288  Q
    |||||||||| |||| ||||||||    
T  18982560 ggttaaaccctttttcagaattat 18982583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 35057412 - 35057477
Alignment:
Q  143 gattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||| ||||||||||| | ||||| | ||| | |||||||||||||||| |||||||||||||    
T  35057412 gattattctacaacctgaataacaattttcaccatgattcattggattacctacactttcaacaat 35057477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 13765186 - 13765242
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  13765186 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 13765242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 23956702 - 23956758
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  23956702 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 23956758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 31021934 - 31021878
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  31021934 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 31021878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 13285598 - 13285681
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||||||  | || ||||||| ||||||||||| | ||||| | ||| | ||| |||||||||||| |||||||||||||    
T  13285598 ataggaaacttaacttaagattattctacaacctgaataacaattttcaccatgattaattggattacctacactttcaacaat 13285681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 18459176 - 18459239
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| ||||||||||||| || || |||  ||||||||||||||| ||| |||||||||||||    
T  18459176 ttattctacaacctgaacaacagtttttatgttaattcattggatttcctacactttcaacaat 18459239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 18585549 - 18585612
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| ||||||||||||| ||||| |||  ||||||||||| ||||| | |||||||||||||    
T  18585549 ttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaat 18585612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 24506327 - 24506228
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| ||| ||||| || ||||| |||||| || |||  ||||| ||||| |||   |||||||||||||||||| |||||||||||||| ||||    
T  24506327 cccaaatttgataagaaacattgcctattattattctaaaacaagaacatcaatttttatactaattcattggattacctacactttcaacaattaaatt 24506228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 15998858 - 15998900
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  15998858 aaactaacaacaactacaaggttaaactctttttcagaattat 15998900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 19825569 - 19825527
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||||||||||||||||||||||| || |||| ||||||||    
T  19825569 aaactaacaacaactacaaggttaaaacctttttcagaattat 19825527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 19825698 - 19825630
Alignment:
Q  117 ccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcat 184  Q
    |||||||| |||||||||||  |||||||||| | | |||| || ||||||||||||||| ||||||||    
T  19825698 ccaaatttgataggaaacttaacctatgattaatctgcaacttggacaccaattattaccctaattcat 19825630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 23226058 - 23226014
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    |||||||||||  |||||||||||| ||||||||||||| |||||    
T  23226058 ataggaaacttaacctatgattattctacaacctgaacatcaatt 23226014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 74; Significance: 6e-34; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 140 - 288
Target Start/End: Complemental strand, 16609 - 16460
Alignment:
Q  140 tatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattttaaattctaacattaatttctcta 239  Q
    |||||||||| | |||||| |||||||||||||||| ||||||||   ||||||| | |||||||||| ||||||||||  ||||||  |||||||||||    
T  16609 tatgattattctgcaacctaaacaccaattattaccctaattcatcatattacctactctttcaacaaatcaattttaatctctaaccctaatttctcta 16510  T
Q  240 atcctcaaa-ctaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||| ||||| |||||||||||||||||||||||||| |||| ||||||||    
T  16509 atcatcaaacctaacaacaactacaaggttaaaccctttttcagaattat 16460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 288
Target Start/End: Complemental strand, 18892 - 18742
Alignment:
Q  140 tatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattttaaattctaacattaatttctcta 239  Q
    |||||| ||| | |||||| |||||||||||||||| |||||||||  ||||||| | |||||||||| ||||||||||  ||||||  |||||||||||    
T  18892 tatgatcattctccaacctaaacaccaattattaccctaattcattatattacctactctttcaacaaatcaattttaatctctaaccctaatttctcta 18793  T
Q  240 atcctca--aactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||| |||  | |||||||||||||||||| ||||||  |||| ||||||||    
T  18792 atcatcatgacctaacaacaactacaaggctaaaccgtttttaagaattat 18742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 159080 - 158988
Alignment:
Q  116 cccaaatttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||| ||||||||| || | ||| |||| | ||||||||||||| ||||| |||  |||||||||||||| |||| ||| |||||||||    
T  159080 cccaaattgataggaaaccttacttattattactctacaacctgaacatcaatttttatattaattcattggatcacctacaccttcaacaat 158988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 19072 - 18979
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| ||||||||| |  |||||  ||||| ||||||||||||| | ||| |||  ||| ||||||||||||||| |||||||||||||    
T  19072 cccaaatttgataggaaacatcacctattgttattctacaacctgaacatcgatttttatattagttcattggattacctacactttcaacaat 18979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 6e-34; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 117 - 288
Target Start/End: Original strand, 29907477 - 29907650
Alignment:
Q  117 ccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattt 215  Q
    |||||||| |||||||| | | |||||| ||||| | ||||  |||||||||| | |||| ||||||||   ||||||| ||||||||||||||||||||    
T  29907477 ccaaatttgataggaaattctacctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattt 29907576  T
Q  216 taaattctaacattaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||| |||||||  |||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||    
T  29907577 taatttctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattat 29907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 117 - 288
Target Start/End: Original strand, 29948643 - 29948816
Alignment:
Q  117 ccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattt 215  Q
    |||||||| |||||||| | | |||||| ||||| | ||||  |||||||||| | |||| ||||||||   ||||||| ||||||||||||||||||||    
T  29948643 ccaaatttgataggaaattctacctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattt 29948742  T
Q  216 taaattctaacattaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||| |||||||  |||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||    
T  29948743 taatttctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattat 29948816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 117 - 288
Target Start/End: Original strand, 29997797 - 29997970
Alignment:
Q  117 ccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattt 215  Q
    |||||||| |||||||| | | |||||| ||||| | ||||  |||||||||| | |||| ||||||||   ||||||| ||||||||||||||||||||    
T  29997797 ccaaatttgataggaaattctacctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattt 29997896  T
Q  216 taaattctaacattaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||| |||||||  |||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||    
T  29997897 taatttctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattat 29997970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 5842738 - 5842820
Alignment:
Q  13 agcagcacagagtacacaaatttaacattgaattaatcaaaagatcatgaaaagcaatggaaaacaaaacccaacaccaccca 95  Q
    |||||||||  |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  5842738 agcagcacaaggtacacgaatttaacattgaatttatcaaaggatcatgaaaagcaatggaaaacaaaacccaacactaccca 5842820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 12917515 - 12917446
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacct 194  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  12917515 ataggaaactctacctatgattattttacaacctgaacaccaattattaccttacttcatcggattacct 12917446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 6805139 - 6805046
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||| ||||||  | |||||||||| ||||||||||||||||||||||||||||||||||  |||||||| | |||||||||||    
T  6805139 cccaaatttgatagaaaacttaacatatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 6805046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 48631172 - 48631265
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| ||||||||| || |||||  ||||| ||||||||||||| ||||| |||  ||||||||||| ||||||| |||||||||||||    
T  48631172 cccaaatttgataggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattgaattacctacactttcaacaat 48631265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 14641629 - 14641589
Alignment:
Q  248 actaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  14641629 actaacaacaactacaaggttaaacccttttttagaattat 14641589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 288
Target Start/End: Complemental strand, 3160808 - 3160667
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattttaaattctaacattaatttctctaatcct 244  Q
    ||||| |||||||| |||| ||||| |||  ||||||||||| ||||||| | ||||||||||| ||| ||  ||||  ||| | ||||||| ||||       
T  3160808 ttattctacaacctaaacatcaatttttatattaattcattgaattacctactctttcaacaat-caaattgcaatttaaacct-aatttctataatatc 3160711  T
Q  245 caaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
     |||||| |||||||||||| ||||||||| |||||||||||||    
T  3160710 aaaactatcaacaactacaaagttaaacccatttttagaattat 3160667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 14520415 - 14520457
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  14520415 aaactaacaacaactacaaggttaaacctttttttagaattat 14520457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 42367 - 42423
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  42367 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 42423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 45803539 - 45803448
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatttta 217  Q
    ||||||||||   |||||| ||||| ||||||||| ||| ||||| |||  ||||||||| ||||||||| | |||||||||| |||||||||    
T  45803539 ataggaaactcaacctatgtttattctacaacctggacatcaattcttatgttaattcatcggattacctactctttcaacaa-tcaatttta 45803448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 46722799 - 46722743
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  46722799 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 46722743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 55291814 - 55291758
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  55291814 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 55291758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 13522560 - 13522481
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacct 194  Q
    ||||||||| ||||||||| |  |||||  ||||| ||||||||||||| ||||| |||  |||||||||||||||||||    
T  13522560 cccaaatttgataggaaacatcacctattgttattctacaacctgaacatcaattcttatgttaattcattggattacct 13522481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 17208493 - 17208535
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||||||||||||||||||||||| || |||| ||||||||    
T  17208493 aaactaacaacaactacaaggttaaatcctttttcagaattat 17208535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 43549866 - 43549812
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  43549866 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 43549812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 14641761 - 14641692
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcat 184  Q
    ||||||||| |||||||||||  |||||||||| | | |||| || ||||||||||||||| ||||||||    
T  14641761 cccaaatttgataggaaacttaacctatgattaatctgcaacttggacaccaattattaccctaattcat 14641692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 3592993 - 3593044
Alignment:
Q  26 acacaaatttaacattgaattaatcaaaagatcatgaaaagcaatggaaaaca 78  Q
    ||||||||||||||| ||||| || ||||||||||||||| ||||| ||||||    
T  3592993 acacaaatttaacat-gaattcattaaaagatcatgaaaaacaatgtaaaaca 3593044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 10555146 - 10555202
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||| ||||||||| |||||    
T  10555146 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 10555202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 18890263 - 18890319
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  ||||||||||||  |||||||||||| |||||    
T  18890263 accccaaatttgataggaaacttaacctatgattattccacaacctgaacatcaatt 18890319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 116 - 274
Target Start/End: Original strand, 35660728 - 35660888
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| |||||||||||  | |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| | || ||||||| ||||||    
T  35660728 cccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttacttcatcggattacctactctctcaacaa-tcaatt 35660826  T
Q  215 ttaaattctaacattaatttctctaatcctcaaa--ctaacaacaactacaaggttaaaccc 274  Q
    |||||||| |||  |||||||||||||| |||||  | ||||||||| || | |||||||||    
T  35660827 ttaaattcaaaccctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccc 35660888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 287
Target Start/End: Original strand, 16296711 - 16296883
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| |||||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||| ||||||    
T  16296711 cccaaatttgataggaaacttaacctatgattattcaacaacctgaacaccaattattaccttaattcatcggattacctactctttcaacaa-tcaatt 16296809  T
Q  215 ttaaattctaacattaatttctctaatcctc-aaactaacaacaactaca--aggttaaacccctttttagaatta 287  Q
    |||| ||| |||  |||||||| ||| | || |||||||||| ||| |||  | ||||||||||||||||||||||    
T  16296810 ttaatttcaaaccctaatttctataa-catcaaaactaacaa-aacaacaatatgttaaacccctttttagaatta 16296883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 14549490 - 14549583
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||||||||||  | |||||||||| ||||||||||||||||||||||||||||||||||  |||||| | | |||||||||||    
T  14549490 cccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttaattcatcagattacatactctttcaacaat 14549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 19434871 - 19434778
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||||||||||  |||||||||||| |||||||||||||||||||||| | |||||||||  |||||||| | |||||||||||    
T  19434871 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattatttctttaattcatcagattacctactctttcaacaat 19434778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 14631104 - 14631146
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  14631104 aaactaacaacaactacaaggttaaaccctttttcagaattat 14631146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 28386083 - 28386139
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  28386083 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 28386139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 9638847 - 9638918
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcat 184  Q
    ||||||||||| |||||||||||  |||||||||| | | |||| || ||||||||||||||| ||||||||    
T  9638847 accccaaatttgataggaaacttaacctatgattaatctgcaacttggacaccaattattaccctaattcat 9638918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 14477502 - 14477565
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| ||||| ||||||| |||||  ||  ||||||||||||||||||| |||||||||||||    
T  14477502 ttattctacaatctgaacatcaatttctatgttaattcattggattacctacactttcaacaat 14477565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 16296907 - 16296949
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||    
T  16296907 aaactaacaacaactaccaggttaaaccctttttcagaattat 16296949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 18230582 - 18230636
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||| ||||||||||| ||||||||||||  ||||||||||||| |||||    
T  18230582 cccaaatttgataggaaacttatcctatgattatcctacaacctgaacatcaatt 18230636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 25513820 - 25513862
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||    
T  25513820 aaactaacaacaactacaatgttaaaccctttttcagaattat 25513862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 18462899 - 18462956
Alignment:
Q  151 tacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| ||||||| ||||| | |  ||||||||||||||||||| |||||||||||||    
T  18462899 tacaatctgaacatcaattttcatgttaattcattggattacctacactttcaacaat 18462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 16277500 - 16277444
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||| ||||||||| |||||    
T  16277500 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 16277444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 53387110 - 53387054
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||| ||||||||| |||||    
T  53387110 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 53387054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 11391221 - 11391139
Alignment:
Q  13 agcagcacagagtacacaaatttaacattgaattaatcaaaagatcatgaaaagcaatggaaaacaaaacccaacaccaccca 95  Q
    |||||||||  |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  11391221 agcagcacaaggtacacgaatttaacattgaatttatcaaaggatcatgaaaagcaatggaaaacaaaacccaacactaccca 11391139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 13315293 - 13315191
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| |||| ||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||| |||||| | |||||||||| ||||||    
T  13315293 cccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattatttccttaattcattgggttacctactctttcaacaa-tcaatt 13315195  T
Q  215 ttaa 218  Q
    ||||    
T  13315194 ttaa 13315191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 12754877 - 12754784
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||||||||||  |||||||||||| |||||||||||||||||||||||| |||||||||  |||||||| | |||||||||||    
T  12754877 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattactttaattcatcagattacctactctttcaacaat 12754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 218
Target Start/End: Original strand, 19282887 - 19282988
Alignment:
Q  117 ccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattt 215  Q
    |||||||| |||| ||||| | |||||||||||| ||||||||||| |||||||||||||||| ||||| ||||||||| | |||||||||| |||||||    
T  19282887 ccaaatttgatagaaaactctacctatgattattctacaacctgaagaccaattattaccttagttcatcggattacctactctttcaacaa-tcaattt 19282985  T
Q  216 taa 218  Q
    |||    
T  19282986 taa 19282988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 38295452 - 38295544
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattttaa 218  Q
    |||||||||| | |||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||| | ||| |||||| ||||||||||    
T  38295452 ataggaaactctacctatgattattctacatcctgaacaccaattattaccttacttcatcggattacctactcttgcaacaa-tcaattttaa 38295544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 208
Target Start/End: Complemental strand, 47975079 - 47975010
Alignment:
Q  139 ctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||   |||||||||||    
T  47975079 ctatgattattctacaacctgaacaccaattattaccttaattcatcggattacctaatctttcaacaat 47975010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 14274074 - 14274156
Alignment:
Q  126 taggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||  ||  ||||||||||||||||||| |||||||||||||    
T  14274074 taggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 14274156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 708733 - 708640
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||||||||||  |||||||||||| |||||||| ||||||||||||||||||||| |||   ||| ||| | |||||||||||    
T  708733 cccaaatttgataggaaacttaacctatgattattctacaacctaaacaccaattattaccttaatccatcatattgcctactctttcaacaat 708640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 37539289 - 37539397
Alignment:
Q  117 ccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattt 215  Q
    |||||||| |||||||||||  |||| ||||||| ||||||||||| | ||||| | ||| | |||||||||||||||| |||||||||||| |||| ||    
T  37539289 ccaaatttgataggaaacttaacctaagattattctacaacctgaataacaattttcaccatgattcattggattacctacactttcaacaa-tcaaatt 37539387  T
Q  216 taaattctaa 225  Q
     |||||||||    
T  37539388 gaaattctaa 37539397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 42566034 - 42565951
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| || |||||  ||||| ||||||||||||| |||||  ||  ||||||||||||||||| | |||||||||||||    
T  42566034 ataggaaacattacctattgttattctacaacctgaacatcaatttctatgttaattcattggattacgtacactttcaacaat 42565951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 16496153 - 16496207
Alignment:
Q  220 ttctaacattaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacc 273  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||||||||||    
T  16496153 ttctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaacc 16496207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 19195032 - 19195121
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaa 204  Q
    ||||||||| |||||||||||  |||||||||||| ||||| ||||| | ||||| | ||| | |||||||||||||| | |||||||||    
T  19195032 cccaaatttgataggaaacttaacctatgattattctacaatctgaataacaattctcaccatgattcattggattacatacactttcaa 19195121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 14105640 - 14105584
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  14105640 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 14105584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 14415657 - 14415601
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  14415657 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 14415601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 17070504 - 17070433
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcat 184  Q
    ||||||||||| |||||||||||  |||||||||| | | |||| || ||||||||||||||| ||||||||    
T  17070504 accccaaatttgataggaaacttaacctatgattaatctgcaacttggacaccaattattaccctaattcat 17070433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 708512 - 708470
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||    
T  708512 aaactaacagcaactacaaggttaaaccctttttcagaattat 708470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 4325937 - 4325991
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  4325937 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 4325991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 8513828 - 8513794
Alignment:
Q  254 aacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||| |||||||||||||    
T  8513828 aacaactacaaggttaaacccttttttagaattat 8513794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 15575732 - 15575690
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||    
T  15575732 aaactaacaacaagtacaaggttaaaccctttttcagaattat 15575690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 19195581 - 19195622
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||||||||||||||||||||||| ||||||| ||||||||    
T  19195581 aaactaacaacaactacaaggttaaa-cccttttcagaattat 19195622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 43745625 - 43745667
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| | ||||||    
T  43745625 aaactaacaacaactacaaggttaaaccctttttcataattat 43745667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 14188506 - 14188450
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| |||||| |||||| |||||    
T  14188506 accccaaatttgataggaaacttaacctatgattattctacaacttgaacatcaatt 14188450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 44190417 - 44190373
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    |||||||||||  |||||||||||| ||||||||||||| |||||    
T  44190417 ataggaaacttaacctatgattattctacaacctgaacatcaatt 44190373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 149718 - 149598
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| |||||||||||  ||||||||||||  |||| |||||||||||||||||||||||||||| ||||||||| | |||||||||| ||||||    
T  149718 cccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaa-tcaatt 149620  T
Q  215 ttaaattctaacattaatttct 236  Q
    |||| ||| |||  ||||||||    
T  149619 ttaatttcaaaccctaatttct 149598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 28652756 - 28652593
Alignment:
Q  122 tttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattttaaatt 221  Q
    ||||||| ||||| |||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| | |||| ||||||| ||||    | |    
T  28652756 tttatagaaaactcttcctatgattattctactacctgaacatcaattattaccttaattcattggattacctactcttttaacaattaaatt---caat 28652660  T
Q  222 ctaacattaatttctctaatcctc-aaactaacaacaactac-aaggttaaacccctttttagaatta 287  Q
    |||||  |||||||| ||| | || ||||||||||||||||| |||| ||||||| |||| |||||||    
T  28652659 ctaaccctaatttctataa-catcaaaactaacaacaactacaaaggctaaaccctttttcagaatta 28652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 1383864 - 1383771
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||| | |||||||||||    
T  1383864 cccaaatttgataggaaacttaacctatgattattctacaacctgaagaccaattattacgttaattcatcggattacctactctttcaacaat 1383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 23801356 - 23801435
Alignment:
Q  138 cctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattttaa 218  Q
    ||||| |||||| |||||||||||||||| ||||||||||||||||| || |||||| | |||||||||| ||||||||||    
T  23801356 cctattattattctacaacctgaacaccagttattaccttaattcatcgggttacctactctttcaacaa-tcaattttaa 23801435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 19647074 - 19647167
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| ||||||||| || |||||  ||||| ||||||||||||| ||||| |||  ||||||||||||||||||| || ||||||||||    
T  19647074 cccaaatttgataggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattggattacctacattttcaacaat 19647167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 45535778 - 45535859
Alignment:
Q  127 aggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||| || |||||  ||||| ||||||||||||| ||||| |||  ||||||||||||||||||| |||||||||||||    
T  45535778 aggaaacattacctattgttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaacaat 45535859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 18388448 - 18388356
Alignment:
Q  116 cccaaatttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||| ||||||||| |  | ||| |||| | ||||||||||||| ||||| |||  ||||||||||||||||||| ||| |||||||||    
T  18388448 cccaaattgataggaaacctcacttattattactctacaacctgaacatcaatttttatattaattcattggattacctacaccttcaacaat 18388356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 45535666 - 45535726
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaac 205  Q
    ||||| ||||||||||||| ||||| |||  ||||||||||||||||||| ||||||||||    
T  45535666 ttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaac 45535726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 28345248 - 28345162
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcacttt 201  Q
    ||||||||| |||||||||||  |||||||||||| |||||||| || | ||||| | ||| | |||||||||||||||| ||||||    
T  28345248 cccaaatttgataggaaacttaacctatgattattctacaacctcaataacaattttcaccatgattcattggattacctacacttt 28345162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 14183677 - 14183620
Alignment:
Q  117 ccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattatta 173  Q
    |||||||| |||||||||| | ||||||||||||  ||||||||||||||||||||||    
T  14183677 ccaaatttgataggaaactctacctatgattattccacaacctgaacaccaattatta 14183620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 36734664 - 36734588
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggatta 191  Q
    ||||||||| |||||||||||  |||| ||||||| |||||||||||||||||||  |||  |||||||||| ||||    
T  36734664 cccaaatttgataggaaacttaacctaagattattctacaacctgaacaccaatttgtacactaattcattgaatta 36734588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 24884231 - 24884294
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| || |||||||||| |||||  ||  ||||||||||||||||||| |||||||||||||    
T  24884231 ttattctataacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 24884294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 21315559 - 21315517
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  21315559 aaactaataacaactacaaggttaaaccctttttcagaattat 21315517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 21335349 - 21335307
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  21335349 aaactaataacaactacaaggttaaaccctttttcagaattat 21335307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 12626619 - 12626543
Alignment:
Q  140 tatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatttta 217  Q
    |||| ||||| ||||||||||||| ||||| ||   ||||||||| ||||||||| | |||||||||| |||||||||    
T  12626619 tatgtttattctacaacctgaacatcaattcttctgttaattcatcggattacctactctttcaacaa-tcaatttta 12626543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 14179930 - 14179882
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattatta 173  Q
    |||||||||  | ||||||||||||  ||||||||||||||||||||||    
T  14179930 ataggaaacactacctatgattattccacaacctgaacaccaattatta 14179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 21072901 - 21072845
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  ||||||||||||  |||||||||||| |||||    
T  21072901 accccaaatttgataggaaacttaacctatgattattccacaacctgaacatcaatt 21072845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 41301130 - 41301086
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    |||||||||||  |||||||||||| ||||||||||||| |||||    
T  41301130 ataggaaacttaacctatgattattctacaacctgaacatcaatt 41301086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 21962 - 22055
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||||  |||||||| | |||||||||||    
T  21962 cccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattcttaccttaattcatcagattacctactctttcaacaat 22055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 9912 - 9958
Alignment:
Q  162 caccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||||||||||||||||||  |||||||| | |||||||||||    
T  9912 caccaattattaccttaattcatcagattacctactctttcaacaat 9958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 36508955 - 36508862
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||  |||||||| | |||||||||||    
T  36508955 cccaaatttgataggaaacttaacctatgattattctacaacctaaacaccaattattaccttaattcatcagattacctactctttcaacaat 36508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 16063720 - 16063762
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  16063720 aaactaacaacaactacaaggttaaacccttttttagaattat 16063762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 17875927 - 17875990
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| ||||||||||||| |||||  ||  ||||||||||||||||||| |||||||||||||    
T  17875927 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 17875990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 21503989 - 21504072
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||||   |||||||||||| ||||||||||||| || || |||  |||||||||||||| |||| | |||||||||||    
T  21503989 ataggaaactcaacctatgattattctacaacctgaacatcagttcttatgttaattcattggatcacctactctttcaacaat 21504072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 27868787 - 27868731
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  27868787 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 27868731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 6551370 - 6551331
Alignment:
Q  249 ctaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  6551370 ctaacaacaactacaaggttaaaccctttttcagaattat 6551331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 31456721 - 31456784
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| ||||||||||||| |||||  ||  ||||||||||| ||||||| |||||||||||||    
T  31456721 ttattctacaacctgaacatcaattcatatgttaattcattgaattacctacactttcaacaat 31456784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 18744843 - 18744885
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  18744843 aaactaataacaactacaaggttaaaccctttttcagaattat 18744885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 33472774 - 33472720
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  33472774 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 33472720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 36315304 - 36315358
Alignment:
Q  220 ttctaacattaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacc 273  Q
    |||||||  |||||||||||||||||||| ||||| ||||||| |||||||||||    
T  36315304 ttctaaccctaatttctctaatcctcaaacctaacgacaactataaggttaaacc 36315358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 21399003 - 21398931
Alignment:
Q  122 tttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacct 194  Q
    ||||||| ||||| |||||||| ||||| ||||||||||||| |||||  |||  ||||| ||| ||||||||    
T  21399003 tttatagaaaactcttcctatgtttattctacaacctgaacatcaatttgtacactaattaattagattacct 21398931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 24594276 - 24594220
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||| ||||||||| |||||    
T  24594276 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 24594220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 24668370 - 24668314
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||| ||||||||| |||||    
T  24668370 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 24668314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 24738139 - 24738083
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||| ||||||||| |||||    
T  24738139 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 24738083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 24750908 - 24750852
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||| ||||||||| |||||    
T  24750908 accccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaatt 24750852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 2103 - 2181
Alignment:
Q  138 cctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatttta 217  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||| |||||||||    
T  2103 cctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaacaa-tcaatttta 2181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 2654 - 2774
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| |||||||||||  | ||||||||||  |||| ||||||||||||||||||||||||||||  |||||||| | |||||||||| ||||||    
T  2654 cccaaatttgataggaaacttaacgtatgattattcaacaatctgaacaccaattattaccttaattcatcagattacctactctttcaacaa-tcaatt 2752  T
Q  215 ttaaattctaacattaatttct 236  Q
    |||| ||| |||  ||||||||    
T  2753 ttaatttcaaaccctaatttct 2774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 2850 - 2892
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  2850 aaactaacaacaactacaaggttaaaccctttttcagaattat 2892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 21404 - 21473
Alignment:
Q  139 ctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| | |||||||||||    
T  21404 ctatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 21473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 8681 - 8783
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| |||| ||||| | |||||||||| | | ||||||||||||||||||||||||||||||||  |||||||| | |||||||||| ||||||    
T  8681 cccaaatttgatagaaaactctacctatgattactctgcaacctgaacaccaattattaccttaattcatctgattacctactctttcaacaa-tcaatt 8779  T
Q  215 ttaa 218  Q
    ||||    
T  8780 ttaa 8783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 16958 - 17117
Alignment:
Q  126 taggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattttaaattctaa 225  Q
    |||||||| ||| ||||  ||||| ||||||||||||| ||||| |||  ||||||||||||||||||| | |||||||||||  ||||  ||||  |||    
T  16958 taggaaacattttctattgttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaaattgcaaat--taa 17055  T
Q  226 cattaatttctctaatcctcaaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
       |||||||| ||||  |||||||| |||||||||||| ||||||||| |||| ||||||||    
T  17056 acctaatttctataat-atcaaactatcaacaactacaaagttaaaccctttttaagaattat 17117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 26489 - 26648
Alignment:
Q  126 taggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattttaaattctaa 225  Q
    |||||||| ||| ||||  ||||| ||||||||||||| ||||| |||  ||||||||||||||||||| | |||||||||||  ||||  ||||  |||    
T  26489 taggaaacattttctattgttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaaattgcaaat--taa 26586  T
Q  226 cattaatttctctaatcctcaaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
       |||||||| ||||  |||||||| |||||||||||| ||||||||| |||| ||||||||    
T  26587 acctaatttctataat-atcaaactatcaacaactacaaagttaaaccctttttaagaattat 26648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 66277 - 66202
Alignment:
Q  129 gaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaa 204  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| | |||||||    
T  66277 gaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaa 66202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 106373 - 106280
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||||||||||  |||| |||||||||||||||||||||  |||||||||||||||||||   ||||||| | |||||||||||    
T  106373 cccaaatttgataggaaacttaacctacgattattttacaacctgaacaataattattaccttaattcatcaaattaccttctctttcaacaat 106280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 2042 - 1984
Alignment:
Q  126 taggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcat 184  Q
    ||||||||||  |||||||||||| |||||| ||||||||| |||||||||||||||||    
T  2042 taggaaacttaacctatgattattctacaacatgaacaccacttattaccttaattcat 1984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 28566 - 28647
Alignment:
Q  127 aggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||| || | ||| |||||| ||||||||||||| ||||| |||  |||||||||| |||||||| |||||||||||||    
T  28566 aggaaacattacgtattattattctacaacctgaacatcaatttttatgttaattcattagattacctacactttcaacaat 28647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 20517268 - 20517175
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| ||||||||| |  |||||  ||||| ||||||||||||| | ||| |||  ||||||||||||||||||| |||||||||||||    
T  20517268 cccaaatttgataggaaacatcacctattgttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 20517175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 20879325 - 20879406
Alignment:
Q  127 aggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||| || |||||  ||||| ||||||||||||| ||||| |||  ||||||||||||||||||| |||||| ||||||    
T  20879325 aggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattggattacctacacttttaacaat 20879406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 12037353 - 12037275
Alignment:
Q  138 cctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatttta 217  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||| |||||| || | ||||| |||| |||||||||    
T  12037353 cctatgattattctacaacctaaacaccaattattaacctaattcatcggattatctactctttctacaa-tcaatttta 12037275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 22344993 - 22345056
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| ||||||||||||| | ||| |||  ||||||||||||||||||| |||||||||||||    
T  22344993 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 22345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 22356653 - 22356716
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| ||||||||||||| | ||| |||  ||||||||||||||||||| |||||||||||||    
T  22356653 ttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaat 22356716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 4380700 - 4380658
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  4380700 aaactaacaacaactacaaggttaaaccctttttcagaattat 4380658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 18816378 - 18816336
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  18816378 aaactaacaacaactacaaggttaaaccctttttcagaattat 18816336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 21514660 - 21514702
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  21514660 aaactaacaacaactacaaggttaaaccctttttaagaattat 21514702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 8413961 - 8413905
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  8413961 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 8413905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 19882787 - 19882843
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  19882787 accccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 19882843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 21676773 - 21676713
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaac 205  Q
    ||||| ||||||||||||| ||||| |||  ||||||||||||||||||| | ||||||||    
T  21676773 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaac 21676713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 42265767 - 42265675
Alignment:
Q  116 cccaaatttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||| ||||||||| |  | ||| |||| | ||||||||||||| ||||| |||  ||||||||||||||||| | ||| |||||||||    
T  42265767 cccaaattgataggaaacctcacttattattactctacaacctgaacatcaatttttatattaattcattggattacatacaccttcaacaat 42265675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 22483630 - 22483713
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||||   |||||| ||||| ||||||||||||| ||||| |||  |||||||||  |||||||| | |||||||||||    
T  22483630 ataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaattcatcagattacctactctttcaacaat 22483713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 36732495 - 36732453
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  36732495 aaactaacaacaactacaaggttaaactctttttcagaattat 36732453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 6716 - 6614
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| |||| ||||| | | |||||||| | |||||| ||||||| |||||||||||||||||||   ||||||| | |||||||||| ||||||    
T  6716 cccaaatttgatagaaaactctacttatgattactctacaacatgaacacgaattattaccttaattcatctaattacctactctttcaacaa-tcaatt 6618  T
Q  215 ttaa 218  Q
    ||||    
T  6617 ttaa 6614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 12081 - 12160
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacct 194  Q
    ||||||||| ||||||||| |  |||||||||||| ||||||||||||| ||||| |||  |||||||||||| ||||||    
T  12081 cccaaatttgataggaaacatcacctatgattattctacaacctgaacatcaattcttatgttaattcattgggttacct 12160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 15698 - 15659
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaat 285  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  15698 aaactaacaacaactacaaggttaaacccttttttagaat 15659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 2283 - 2241
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  2283 aaactaacaacaactacaaggttaaaccctttttcagaattat 2241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 1989 - 2031
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  1989 aaactaacaacaactacaaggttaaaccctttttcagaattat 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 17604 - 17562
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  17604 aaactaacaacaactacaaggttaaaccctttttcagaattat 17562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 439 - 385
Alignment:
Q  220 ttctaacattaatttctctaatcctcaaa-ctaacaacaactacaaggttaaacc 273  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||||||||||    
T  439 ttctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaacc 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 186279 - 186237
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  186279 aaactaacaacaactacaaggttaaaccctttttcagaattat 186237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 28399 - 28563
Alignment:
Q  122 tttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaattttaaatt 221  Q
    ||||||| ||||| |||||||| ||||| |||||||||| || |||||  |||  ||||| |||||||||||| | |||| ||||||| ||||    | |    
T  28399 tttatagaaaactcttcctatgtttattctacaacctgaccatcaatttgtacactaattaattggattacctactcttttaacaattaaatt---caat 28495  T
Q  222 ctaacattaatttctctaatcctcaaactaacaacaactac-aaggttaaacccctttttagaattat 288  Q
    |||||  |||| ||| |||     ||||||||||||||||| |||||||||||| |||| ||||||||    
T  28496 ctaaccctaatctctataacataaaaactaacaacaactacaaaggttaaaccctttttcagaattat 28563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 38617 - 38561
Alignment:
Q  152 acaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||||||| ||||| | |  ||||||||||||||||||| |||||||||||||    
T  38617 acaacctgaacatcaattttcatgttaattcattggattacctacactttcaacaat 38561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 14687 - 14627
Alignment:
Q  229 taatttctctaatcctcaaa-ctaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||||||||||| ||||| ||||||||||||||||  |||||||| |||| ||||||||    
T  14687 taatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattat 14627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 23745 - 23685
Alignment:
Q  229 taatttctctaatcctcaaa-ctaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||||||||||| ||||| ||||||||||||||||  |||||||| |||| ||||||||    
T  23745 taatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattat 23685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 3505 - 3466
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaat 285  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  3505 aaactaacaacaactacaaggttaaaccctttttcagaat 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 3045 - 3144
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaattcaatt 214  Q
    ||||||||| ||| ||||| || ||||| |||||| || |||| ||||| ||||| |||   |||||||||| ||||||| |||||||||||||| ||||    
T  3045 cccaaatttgataagaaacattgcctattattattctaaaaccagaacatcaatttttatactaattcattgaattacctacactttcaacaattaaatt 3144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 6976 - 6913
Alignment:
Q  145 ttattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||| ||||||||||||| ||||| |||  ||||||||||| ||||| | |||||||||||||    
T  6976 ttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaat 6913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 18965 - 19040
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactt 200  Q
    |||||||||||  | |||||||||| ||||||||||| | ||||| | ||| | |||||||||||||||| |||||    
T  18965 ataggaaacttaacatatgattattctacaacctgaataacaattttcaccatgattcattggattacctacactt 19040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 19176 - 19218
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  19176 aaactaataacaactacaaggttaaaccctttttcagaattat 19218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 5388 - 5346
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  5388 aaacgaacaacaactacaaggttaaaccctttttaagaattat 5346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 8005 - 8059
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||||| |||||    
T  8005 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 8059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 1045 - 1087
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||||||||| |||||||||||||||| |||| ||||||||    
T  1045 aaactaacaacatctacaaggttaaaccctttttcagaattat 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 18023 - 17981
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||||||||||||||||||||||||| || |||| ||||||||    
T  18023 aaactaacaacaactacaaggttaaatcctttttcagaattat 17981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 35342 - 35424
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaa 207  Q
    ||||||||||   |||||| ||||| ||||||||||||| ||||| |||  |||||| |||||||||| | |||||| |||||    
T  35342 ataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaatttattggattacatacacttttaacaa 35424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 18244 - 18286
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaattat 288  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  18244 aaaccaacaacaactacaaggttaaaccctttttcagaattat 18286  T

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Target: scaffold0180 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 28552 - 28495
Alignment:
Q  151 tacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||||| || ||||| |||  ||||||||||||||||||| ||| |||||||||    
T  28552 tacaacctgaccatcaatttttatattaattcattggattacctacaccttcaacaat 28495  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 23465 - 23546
Alignment:
Q  127 aggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||| || ||||| |||||| ||||||||||| | ||||| | |  |||||||||| |||||||| |||||| ||||||    
T  23465 aggaaacattacctattattattctacaacctgaaaatcaattttcatgttaattcatttgattacctacacttttaacaat 23546  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 169279 - 169328
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaac 162  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||    
T  169279 accccaaatttgataggaaacttaacctatgattattctacaacctgaac 169328  T

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Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 176632 - 176681
Alignment:
Q  114 accccaaattt-ataggaaacttttcctatgattattttacaacctgaac 162  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||||||||    
T  176632 accccaaatttgataggaaacttaacctatgattattctacaacctgaac 176681  T

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Target: scaffold1800 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 446 - 541
Alignment:
Q  116 cccaaattt-ataggaaacttttcctatgattattttacaacctgaacaccaatt--attaccttaattcattggattacctgcactttcaacaat 208  Q
    ||||||||| |||| |||| || |||||  ||||| ||||||| ||||| |||||  ||||  ||||||||||| ||||||| |||||||||||||    
T  446 cccaaatttgatagaaaacattacctattgttattctacaacccgaacatcaattgtattatattaattcattgaattacctacactttcaacaat 541  T

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Target: scaffold0308 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 13234 - 13326
Alignment:
Q  116 cccaaatttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||| ||||||||| |  | ||| |||| ||||||||||||||| ||||| |||  | |||||||||| |||||| ||  |||||||||    
T  13234 cccaaattgataggaaacctcacttattattactttacaacctgaacatcaatttttatatcaattcattgggttacctacatcttcaacaat 13326  T

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Target: scaffold0220 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 13918 - 13958
Alignment:
Q  246 aaactaacaacaactacaaggttaaacccctttttagaatt 286  Q
    ||||||||||||||| ||||||||||||| |||| ||||||    
T  13918 aaactaacaacaacttcaaggttaaaccctttttcagaatt 13958  T

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Target: scaffold0151 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 9946 - 9990
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    |||||||||||  |||||||||||| ||||||||||||| |||||    
T  9946 ataggaaacttaacctatgattattctacaacctgaacatcaatt 9990  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 35722 - 35630
Alignment:
Q  116 cccaaatttataggaaacttttcctatgattattttacaacctgaacaccaattattaccttaattcattggattacctgcactttcaacaat 208  Q
    |||||||| ||||||||| |  | ||| |||| | |||||||| |||| ||||| |||  |||||||||||||||| || ||| |||||||||    
T  35722 cccaaattgataggaaacctcacttattattactctacaacctcaacatcaatttttatattaattcattggattatctacaccttcaacaat 35630  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 40013 - 39969
Alignment:
Q  125 ataggaaacttttcctatgattattttacaacctgaacaccaatt 169  Q
    |||||||||||  |||||||||||| ||||||||||||| |||||    
T  40013 ataggaaacttaacctatgattattctacaacctgaacatcaatt 39969  T

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