View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1482_low_9 (Length: 387)

Name: NF1482_low_9
Description: NF1482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1482_low_9
NF1482_low_9
[»] chr5 (57 HSPs)
chr5 (98-344)||(33006863-33007109)
chr5 (98-344)||(34846323-34846569)
chr5 (98-329)||(15675284-15675536)
chr5 (156-344)||(35468858-35469047)
chr5 (98-326)||(7161976-7162213)
chr5 (98-326)||(43228535-43228772)
chr5 (202-330)||(16667499-16667627)
chr5 (166-344)||(30248933-30249099)
chr5 (92-326)||(16567777-16568020)
chr5 (98-326)||(1672379-1672616)
chr5 (98-326)||(32953560-32953797)
chr5 (156-330)||(34443948-34444110)
chr5 (202-329)||(21068980-21069107)
chr5 (202-330)||(17192675-17192803)
chr5 (207-330)||(12267420-12267543)
chr5 (202-333)||(15503895-15504014)
chr5 (101-211)||(21069131-21069241)
chr5 (98-182)||(14832703-14832787)
chr5 (207-330)||(13942790-13942916)
chr5 (101-187)||(37552048-37552134)
chr5 (101-187)||(37654878-37654964)
chr5 (209-343)||(37779633-37779767)
chr5 (89-182)||(13942636-13942729)
chr5 (98-182)||(2476504-2476588)
chr5 (156-234)||(2476431-2476509)
chr5 (202-303)||(767283-767380)
chr5 (93-189)||(12267270-12267366)
chr5 (171-234)||(14832797-14832860)
chr5 (93-182)||(15504088-15504177)
chr5 (222-326)||(37654774-37654878)
chr5 (248-333)||(9738351-9738436)
chr5 (98-189)||(6900899-6900990)
chr5 (262-344)||(13694803-13694885)
chr5 (209-298)||(37607471-37607560)
chr5 (272-361)||(6900720-6900813)
chr5 (110-180)||(36234459-36234529)
chr5 (222-326)||(37551944-37552048)
chr5 (272-326)||(2476390-2476444)
chr5 (101-163)||(30249123-30249185)
chr5 (202-268)||(36234588-36234654)
chr5 (204-257)||(7159609-7159662)
chr5 (102-155)||(35469069-35469122)
chr5 (129-189)||(767430-767490)
chr5 (221-269)||(42989565-42989613)
chr5 (98-146)||(42989673-42989721)
chr5 (266-333)||(13695029-13695096)
chr5 (148-211)||(39605784-39605847)
chr5 (109-187)||(37779777-37779855)
chr5 (156-211)||(6900856-6900911)
chr5 (202-253)||(15436041-15436091)
chr5 (156-211)||(15504038-15504093)
chr5 (98-133)||(37394932-37394967)
chr5 (98-211)||(8214531-8214645)
chr5 (109-187)||(37607570-37607648)
chr5 (202-231)||(13695092-13695121)
chr5 (202-234)||(6900800-6900832)
chr5 (202-286)||(12317961-12318045)
[»] chr1 (43 HSPs)
chr1 (98-344)||(31844533-31844779)
chr1 (98-344)||(6331642-6331888)
chr1 (98-330)||(8239261-8239495)
chr1 (98-330)||(14727300-14727553)
chr1 (98-330)||(33468863-33469074)
chr1 (98-344)||(27583909-27584160)
chr1 (98-330)||(27460678-27460901)
chr1 (166-330)||(25011518-25011669)
chr1 (156-330)||(25007446-25007608)
chr1 (156-330)||(37153961-37154123)
chr1 (156-330)||(44305394-44305556)
chr1 (207-330)||(48940438-48940561)
chr1 (100-211)||(34459231-34459342)
chr1 (100-211)||(49898498-49898609)
chr1 (102-197)||(9527181-9527276)
chr1 (170-234)||(1428404-1428468)
chr1 (204-304)||(24745410-24745508)
chr1 (98-189)||(4774104-4774195)
chr1 (202-330)||(9527027-9527143)
chr1 (202-330)||(24646036-24646151)
chr1 (202-330)||(44238875-44238992)
chr1 (98-169)||(25011429-25011500)
chr1 (99-169)||(1428312-1428382)
chr1 (102-211)||(6801980-6802089)
chr1 (99-188)||(24646181-24646270)
chr1 (98-155)||(25007630-25007687)
chr1 (98-155)||(37153882-37153939)
chr1 (110-189)||(4641941-4642020)
chr1 (98-188)||(24745540-24745628)
chr1 (222-344)||(4773975-4774085)
chr1 (203-268)||(34459141-34459206)
chr1 (98-155)||(44305578-44305635)
chr1 (202-344)||(6802113-6802247)
chr1 (204-328)||(4642089-4642201)
chr1 (98-145)||(17875579-17875626)
chr1 (272-330)||(1428455-1428513)
chr1 (156-211)||(4642008-4642063)
chr1 (98-133)||(42817784-42817819)
chr1 (129-179)||(48940328-48940378)
chr1 (272-330)||(49898397-49898455)
chr1 (205-234)||(49898442-49898471)
chr1 (93-133)||(4163546-4163586)
chr1 (202-234)||(33169338-33169370)
[»] chr3 (43 HSPs)
chr3 (98-330)||(26370934-26371166)
chr3 (98-330)||(37516618-37516850)
chr3 (156-344)||(7500918-7501106)
chr3 (102-330)||(25391741-25391957)
chr3 (156-330)||(53651886-53652048)
chr3 (156-330)||(44047572-44047734)
chr3 (156-326)||(14461057-14461215)
chr3 (156-330)||(28311265-28311427)
chr3 (203-328)||(41218389-41218514)
chr3 (93-326)||(26278343-26278564)
chr3 (166-330)||(12909808-12909968)
chr3 (98-333)||(53987849-53988061)
chr3 (209-326)||(35077204-35077321)
chr3 (202-330)||(33179141-33179257)
chr3 (203-333)||(41358632-41358763)
chr3 (156-234)||(43700164-43700242)
chr3 (98-179)||(33178984-33179065)
chr3 (98-182)||(41218247-41218331)
chr3 (202-270)||(53068278-53068346)
chr3 (98-182)||(43700085-43700169)
chr3 (272-330)||(43700229-43700287)
chr3 (98-155)||(28311449-28311506)
chr3 (272-344)||(44625672-44625744)
chr3 (98-161)||(44047750-44047812)
chr3 (209-270)||(9600386-9600447)
chr3 (98-155)||(12909998-12910055)
chr3 (98-155)||(14461237-14461294)
chr3 (204-257)||(38239502-38239555)
chr3 (98-152)||(53652073-53652127)
chr3 (272-326)||(9600342-9600396)
chr3 (98-188)||(41358513-41358601)
chr3 (272-330)||(53068230-53068288)
chr3 (209-286)||(30172616-30172693)
chr3 (202-259)||(36869966-36870023)
chr3 (100-145)||(51408472-51408517)
chr3 (202-286)||(4293318-4293401)
chr3 (98-154)||(7501129-7501185)
chr3 (202-242)||(43447620-43447660)
chr3 (208-283)||(4245823-4245898)
chr3 (98-144)||(31989295-31989341)
chr3 (208-270)||(47511667-47511729)
chr3 (202-254)||(497401-497453)
chr3 (202-234)||(41199946-41199978)
[»] chr7 (41 HSPs)
chr7 (110-343)||(26722863-26723096)
chr7 (156-330)||(35300399-35300573)
chr7 (98-326)||(7873112-7873349)
chr7 (110-330)||(41759531-41759753)
chr7 (98-344)||(5991312-5991564)
chr7 (98-326)||(22206578-22206815)
chr7 (98-326)||(22227924-22228161)
chr7 (156-286)||(23704440-23704570)
chr7 (202-331)||(3012279-3012408)
chr7 (98-211)||(3012432-3012545)
chr7 (98-326)||(25688103-25688319)
chr7 (205-330)||(19377365-19377490)
chr7 (202-306)||(4843298-4843402)
chr7 (105-270)||(38991076-38991245)
chr7 (202-330)||(28694057-28694184)
chr7 (106-197)||(42439462-42439553)
chr7 (98-211)||(814865-814978)
chr7 (98-182)||(21932634-21932718)
chr7 (204-344)||(21932798-21932925)
chr7 (202-286)||(38129010-38129094)
chr7 (204-270)||(21688145-21688211)
chr7 (110-189)||(4843452-4843531)
chr7 (101-211)||(38128876-38128986)
chr7 (100-189)||(28693897-28693986)
chr7 (202-274)||(42439591-42439663)
chr7 (202-330)||(815002-815118)
chr7 (100-270)||(30852373-30852531)
chr7 (225-326)||(5850707-5850808)
chr7 (98-211)||(41862238-41862351)
chr7 (110-179)||(19377554-19377623)
chr7 (98-182)||(21688288-21688372)
chr7 (101-169)||(23704364-23704432)
chr7 (92-144)||(27387163-27387215)
chr7 (98-145)||(19400247-19400294)
chr7 (98-145)||(45197906-45197953)
chr7 (98-155)||(35300320-35300377)
chr7 (98-132)||(25491497-25491531)
chr7 (98-135)||(6113579-6113616)
chr7 (98-139)||(10224164-10224205)
chr7 (272-305)||(21688122-21688155)
chr7 (202-250)||(1756821-1756869)
[»] chr4 (51 HSPs)
chr4 (98-327)||(10058511-10058740)
chr4 (98-344)||(31364104-31364338)
chr4 (166-344)||(4728515-4728693)
chr4 (98-330)||(46645574-46645827)
chr4 (174-330)||(2576142-2576299)
chr4 (98-330)||(4552168-4552409)
chr4 (98-326)||(9003543-9003779)
chr4 (156-344)||(10715623-10715801)
chr4 (156-344)||(10929393-10929571)
chr4 (98-326)||(14044332-14044548)
chr4 (202-330)||(25237547-25237675)
chr4 (166-330)||(2017418-2017570)
chr4 (166-333)||(40969204-40969359)
chr4 (99-330)||(41972335-41972570)
chr4 (98-330)||(50383871-50384097)
chr4 (98-182)||(43003076-43003160)
chr4 (202-311)||(2521948-2522056)
chr4 (92-326)||(11826934-11827155)
chr4 (98-189)||(52373887-52373978)
chr4 (202-328)||(31929048-31929174)
chr4 (98-326)||(9694074-9694288)
chr4 (92-182)||(32006023-32006113)
chr4 (100-189)||(2521792-2521881)
chr4 (202-287)||(36947532-36947617)
chr4 (4-90)||(45887025-45887113)
chr4 (207-270)||(8901834-8901897)
chr4 (202-260)||(49745080-49745138)
chr4 (98-211)||(25237699-25237812)
chr4 (93-163)||(4728717-4728787)
chr4 (156-206)||(32005978-32006028)
chr4 (272-333)||(1585689-1585750)
chr4 (100-169)||(40969377-40969446)
chr4 (269-333)||(15034545-15034609)
chr4 (117-189)||(50100003-50100075)
chr4 (98-161)||(2017329-2017392)
chr4 (272-330)||(32005897-32005955)
chr4 (98-187)||(32828278-32828367)
chr4 (98-165)||(2576329-2576396)
chr4 (202-269)||(50099872-50099939)
chr4 (202-328)||(41955199-41955324)
chr4 (98-155)||(10715823-10715880)
chr4 (98-155)||(10929593-10929650)
chr4 (278-326)||(32828202-32828250)
chr4 (202-269)||(52373770-52373837)
chr4 (202-284)||(42739869-42739951)
chr4 (272-344)||(6017085-6017157)
chr4 (115-179)||(49745199-49745263)
chr4 (99-133)||(6017306-6017340)
chr4 (272-330)||(50099823-50099881)
chr4 (98-139)||(6255439-6255480)
chr4 (93-145)||(37236116-37236168)
[»] chr6 (31 HSPs)
chr6 (102-330)||(1780939-1781155)
chr6 (101-344)||(9696012-9696276)
chr6 (156-330)||(15528917-15529091)
chr6 (98-330)||(10397701-10397925)
chr6 (156-333)||(9046886-9047063)
chr6 (174-326)||(15122018-15122170)
chr6 (156-293)||(2941230-2941367)
chr6 (156-344)||(34248984-34249160)
chr6 (202-330)||(2836217-2836345)
chr6 (156-344)||(23663730-23663906)
chr6 (98-189)||(2960805-2960896)
chr6 (202-329)||(339319-339434)
chr6 (105-182)||(2836066-2836143)
chr6 (100-189)||(31188206-31188295)
chr6 (98-182)||(23663651-23663735)
chr6 (110-182)||(34248917-34248989)
chr6 (100-256)||(14938816-14938981)
chr6 (247-330)||(34188773-34188856)
chr6 (98-188)||(339472-339562)
chr6 (93-179)||(15122186-15122272)
chr6 (98-189)||(34188931-34189022)
chr6 (101-179)||(28614299-28614377)
chr6 (248-324)||(28614434-28614510)
chr6 (101-155)||(2941389-2941443)
chr6 (97-151)||(9046806-9046860)
chr6 (100-189)||(31200050-31200140)
chr6 (98-161)||(15529107-15529170)
chr6 (273-326)||(2960671-2960724)
chr6 (98-145)||(26218301-26218348)
chr6 (209-270)||(2960715-2960776)
chr6 (272-344)||(5582444-5582516)
[»] chr8 (24 HSPs)
chr8 (98-344)||(36406381-36406648)
chr8 (102-344)||(24965001-24965231)
chr8 (156-330)||(3383990-3384164)
chr8 (166-344)||(28928027-28928194)
chr8 (202-330)||(13243064-13243192)
chr8 (202-330)||(39431679-39431807)
chr8 (102-270)||(27321758-27321935)
chr8 (98-187)||(38214860-38214949)
chr8 (105-182)||(34282759-34282836)
chr8 (201-330)||(34282913-34283030)
chr8 (98-182)||(35384257-35384341)
chr8 (202-333)||(8968309-8968435)
chr8 (208-306)||(31500854-31500950)
chr8 (98-211)||(31500707-31500818)
chr8 (92-169)||(28928212-28928289)
chr8 (110-179)||(13243273-13243342)
chr8 (202-333)||(21138075-21138194)
chr8 (272-326)||(27321925-27321979)
chr8 (272-326)||(38214745-38214799)
chr8 (98-155)||(3383911-3383968)
chr8 (209-270)||(38214789-38214850)
chr8 (202-284)||(26945689-26945771)
chr8 (202-251)||(24674618-24674667)
chr8 (98-139)||(42232063-42232104)
[»] chr2 (44 HSPs)
chr2 (98-330)||(22572613-22572833)
chr2 (156-344)||(6799856-6800032)
chr2 (166-330)||(13203750-13203902)
chr2 (202-362)||(25562869-25563034)
chr2 (156-344)||(41114840-41115016)
chr2 (156-330)||(18299113-18299275)
chr2 (110-330)||(2475805-2476018)
chr2 (98-266)||(29257401-29257590)
chr2 (98-211)||(17249441-17249554)
chr2 (98-182)||(303983-304067)
chr2 (202-274)||(17148808-17148879)
chr2 (205-330)||(12000505-12000619)
chr2 (202-333)||(34756659-34756790)
chr2 (93-211)||(45444339-45444458)
chr2 (100-182)||(41010652-41010734)
chr2 (202-330)||(304141-304255)
chr2 (98-182)||(17148936-17149020)
chr2 (98-211)||(16220920-16221033)
chr2 (205-260)||(15651248-15651303)
chr2 (203-270)||(17249349-17249416)
chr2 (202-269)||(41010507-41010574)
chr2 (106-182)||(33909246-33909322)
chr2 (98-169)||(13203920-13203991)
chr2 (101-155)||(41114764-41114818)
chr2 (98-179)||(12000700-12000781)
chr2 (113-169)||(18299049-18299105)
chr2 (156-211)||(304062-304117)
chr2 (156-211)||(12000646-12000701)
chr2 (203-266)||(15429213-15429276)
chr2 (203-270)||(33909359-33909426)
chr2 (272-333)||(4570554-4570615)
chr2 (220-285)||(19881534-19881599)
chr2 (98-139)||(26655690-26655731)
chr2 (202-286)||(13654790-13654874)
chr2 (98-145)||(1955096-1955143)
chr2 (148-211)||(34756834-34756897)
chr2 (98-133)||(35649538-35649573)
chr2 (98-145)||(42477605-42477652)
chr2 (277-330)||(33909421-33909474)
chr2 (272-333)||(42152602-42152663)
chr2 (202-234)||(9011436-9011468)
chr2 (272-328)||(16221076-16221132)
chr2 (98-182)||(25563112-25563196)
chr2 (209-249)||(29759855-29759895)
[»] scaffold0638 (1 HSPs)
scaffold0638 (98-326)||(4085-4301)
[»] scaffold0075 (5 HSPs)
scaffold0075 (156-330)||(6893-7055)
scaffold0075 (156-270)||(11554-11668)
scaffold0075 (98-155)||(11690-11747)
scaffold0075 (273-330)||(11507-11563)
scaffold0075 (99-155)||(7077-7132)
[»] scaffold0618 (1 HSPs)
scaffold0618 (98-266)||(1730-1919)
[»] scaffold0021 (4 HSPs)
scaffold0021 (202-330)||(109316-109444)
scaffold0021 (101-211)||(112099-112210)
scaffold0021 (202-304)||(112234-112333)
scaffold0021 (101-182)||(109198-109280)


Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 98 - 344
Target Start/End: Complemental strand, 33007109 - 33006863
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  33007109 ggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatctttc 33007010  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  |     
T  33007009 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctacggaatttacacaaaaatccgcaggtaaatccgcaggaaaagctaaaaaatt 33006910  T
Q  298 tagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||||||||||||||||||||||||||||||| || |||| |||||    
T  33006909 tagtaatggttgggtttgctacaaagaaagttggagccgagcctggg 33006863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 98 - 344
Target Start/End: Complemental strand, 34846569 - 34846323
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  34846569 ggcggagccaggaattttatagagcctggacaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatctttc 34846470  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
     ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||    
T  34846469 atgcggaacctaaatccttggcaaaatctgtaggaaatgtgtttactgcggaatttacacaaaaatccggaggtaaatccgcaggataagctaaaaattc 34846370  T
Q  298 tagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||||||||| |  |||||||||||||||||| || |||| |||||    
T  34846369 tagtaatggtttgacttgctacaaagaaagttggagccgagcctggg 34846323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 98 - 329
Target Start/End: Complemental strand, 15675536 - 15675284
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttccta-------------- 183  Q
    |||||||| || |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||                   
T  15675536 ggcggagctaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtagataatttcaca 15675437  T
Q  184 -------cggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatc 276  Q
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  15675436 tttccttcggatatatctttcctgcggaacttaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaactccgcaggtaaatc 15675337  T
Q  277 cgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagtt 329  Q
    ||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||    
T  15675336 cgcagaaaaagttaaaaattctagtaatggttgggtttgcaacaaagaaagtt 15675284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 156 - 344
Target Start/End: Complemental strand, 35469047 - 35468858
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35469047 tttcctgcagataatttcacattttctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 35468948  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagct-aaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||| ||||||||  |||||||||| ||||||| |||| |||||| |||||||||| |||||||||||||||||| || |||| |||||    
T  35468947 acaaaaatccgcagaaaaatccgcagaaaaagctaaaaaattctagcaatggttgggcttgctacaaagaaagttggagccgagcctggg 35468858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 98 - 326
Target Start/End: Original strand, 7161976 - 7162213
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-tatc--- 193  Q
    |||||||||||||||||||||||| |||||||||||| |||| |||||| |||||||| ||||||| ||||| ||||||||||||  ||||| | ||       
T  7161976 ggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcaaataatttcacatttcctgtggataatttcaca 7162075  T
Q  194 tttcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagc 288  Q
    |||||||||||| ||     ||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||||||||||||||||||    
T  7162076 tttcctgcggaatctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctgtggaatttacataaaaatcctcaggtaaatccgcaggaaaagc 7162175  T
Q  289 taaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    |||||||| ||||||||| |||| ||||||||||||||    
T  7162176 taaaatttttagtaatggctgggcttgctacaaagaaa 7162213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 98 - 326
Target Start/End: Original strand, 43228535 - 43228772
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-tatc--- 193  Q
    |||||||||||||||||||||||| |||||||||||| | || |||||| |||||| ||||||||||||||| |||| ||||| | | |||| | ||       
T  43228535 ggcggagccagaaattttatagagcctgggcaaaaaactaatcgcaaaatgttactcctttcctgcgaataatttcatatttcttgcagataatttcaca 43228634  T
Q  194 tttcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagc 288  Q
    |||||||||||| ||     ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  43228635 tttcctgcggaatctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaacatccgcaggtaaatccgtaggaaaagc 43228734  T
Q  289 taaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||| |||||||||||| |||| ||||||||||||||    
T  43228735 taaaagttctagtaatggctgggcttgctacaaagaaa 43228772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 16667499 - 16667627
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  16667499 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcaggtaaatccgcaggaaaagctaaaagttctagt 16667598  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    ||||| |||  ||||||||||||||||||    
T  16667599 aatggctggacttgctacaaagaaagttg 16667627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 166 - 344
Target Start/End: Complemental strand, 30249099 - 30248933
Alignment:
Q  166 ataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatcc 265  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  30249099 ataatttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------ 30249006  T
Q  266 gcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
          |||||||||| ||||||||||| |||||||||| |||||| |||||||||||||||||| || |||| |||||    
T  30249005 ------aaatccgcagaaaaagctaaaaattctagtaatagttgggcttgctacaaagaaagttggagccgagcctggg 30248933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 92 - 326
Target Start/End: Complemental strand, 16568020 - 16567777
Alignment:
Q  92 aacaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-t 190  Q
    ||||| ||||||| ||||||||||||||||  ||||||||||| |||| |||||| |||||||| |||||| |||||| |||||||||||| |||||| |    
T  16568020 aacagtggcggagtcagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttacttccttcctgggaataatttcacatttcctgcggataat 16567921  T
Q  191 atc---tttcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcagg 282  Q
     ||   |||||||||||| ||     ||||||| ||||||||||| ||||||||||||||||||| |||||||| ||  || |||||||||||||||| |    
T  16567920 ttcacatttcctgcggaatctgcaggaaatcctaggcaaaatctgtaggaaatgtgtttcctgcgaaatttacataacaattcgcaggtaaatccgcaag 16567821  T
Q  283 aaaagctaaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||||||||| |||||||||||| |||  ||||||||||||||    
T  16567820 aaaagctaaaagttctagtaatggctggacttgctacaaagaaa 16567777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 98 - 326
Target Start/End: Original strand, 1672379 - 1672616
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-tatc--- 193  Q
    |||||||||||||||||||||||| |||||||||||| |||| |||||| |||||||| ||||||||||||| ||||||||| || | |||| | ||       
T  1672379 ggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgcagataatttcaca 1672478  T
Q  194 tttcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagc 288  Q
    ||||||  |||| ||     ||||||| |||||||||||||| |||| ||||||||||||||| |||| ||| || ||||||||||||||||||||| |     
T  1672479 tttcctatggaatctgtaggaaatcctaggcaaaatctgcagaaaatatgtttcctgcggaatgtacataaaaattcgcaggtaaatccgcaggaaagga 1672578  T
Q  289 taaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  1672579 taaaagttctagtaatggttgggattgctacaaagaaa 1672616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 98 - 326
Target Start/End: Original strand, 32953560 - 32953797
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-tatc--- 193  Q
    |||||||||  ||||||||||||| ||| |||||||| |||| |||||| |||||||| ||||| ||||||| |||||||||||| | |||| | ||       
T  32953560 ggcggagccgtaaattttatagagcctgtgcaaaaaagttatcgcaaaatgttacttccttcctacgaataatttcacatttcctgcagataatttcaca 32953659  T
Q  194 tttcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagc 288  Q
    |||||||||||| ||     ||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||  ||||||||||||| |||||||||    
T  32953660 tttcctgcggaatctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctacggaatttacataaaaatttgcaggtaaatccgtaggaaaagc 32953759  T
Q  289 taaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||| |||||||||||| |||| ||||||||||||||    
T  32953760 taaaagttctagtaatggctgggcttgctacaaagaaa 32953797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 156 - 330
Target Start/End: Complemental strand, 34444110 - 34443948
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||     
T  34444110 tttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgcatttcttgcggaatttag 34444011  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||            ||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||    
T  34444010 acaa------------aaatccgcaggaaaagctacaaattctagtaatggtagggcttgctacaaagaaagttg 34443948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 329
Target Start/End: Complemental strand, 21069107 - 21068980
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||||||||| ||||||| |||||||    
T  21069107 ggaacctaaatctttggcaaaatctgcaggaaatgtgtttcttgcggaatatacacaaaaatgcgcaggtaaatccgcaggaaaggctaaaaattctagt 21069008  T
Q  302 aatggttgggtttgctacaaagaaagtt 329  Q
    |||||||||| || ||||||||||||||    
T  21069007 aatggttgggcttactacaaagaaagtt 21068980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 17192675 - 17192803
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||||||| |||||||| |||||||    
T  17192675 ggaacctaaatccttgacaaaatctgcaggaaatgtatttcctgcggaattgacacaaaaatccgccggtaaatccgcaggaagagctaaaagttctagt 17192774  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    ||||| || | ||||||||||||||||||    
T  17192775 aatggctgagcttgctacaaagaaagttg 17192803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 12267420 - 12267543
Alignment:
Q  207 ctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatgg 306  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||||||||| |    
T  12267420 ctaaattcgtggcaaaatctacaggaaatgtgtttcttgcggaatttacataaaaatccgcaggtaaatccacaggaaaagctaaaagttctagtaattg 12267519  T
Q  307 ttgggtttgctacaaagaaagttg 330  Q
     | || ||||||||||||||||||    
T  12267520 ctaggcttgctacaaagaaagttg 12267543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 15504014 - 15503895
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||            |||||||||||||||||||||| |||||||    
T  15504014 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaa------------aaatccgcaggaaaagctaaaaattctagt 15503927  T
Q  302 aatggttgggtttgctacaaagaaagttgaag 333  Q
    ||||||| || |||||||||||||| ||||||    
T  15503926 aatggttaggcttgctacaaagaaatttgaag 15503895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 21069241 - 21069131
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcctg 200  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||  ||||| |||||||||||| | |||||||||||||||    
T  21069241 ggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacgttatttccttcctggaaataatttcacatttcctgcagatatatctttcctg 21069142  T
Q  201 cggaacctaaa 211  Q
     ||| ||||||    
T  21069141 tggatcctaaa 21069131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 14832703 - 14832787
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||    
T  14832703 ggcggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcct 14832787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 13942790 - 13942916
Alignment:
Q  207 ctaaatccttggcaaaatctgcaggaaatgtg---tttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaa 303  Q
    ||||||||||||||||||||||||||||||||   |||  || ||||| |||||||| ||| ||||||||||| | |||||||||| ||| |||||||||    
T  13942790 ctaaatccttggcaaaatctgcaggaaatgtggtgtttattgtggaatctacacaaaaatctgcaggtaaatcggtaggaaaagctcaaagttctagtaa 13942889  T
Q  304 tggttgggtttgctacaaagaaagttg 330  Q
     || |||||||||||||||||||||||    
T  13942890 aggctgggtttgctacaaagaaagttg 13942916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 37552134 - 37552048
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacgga 187  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||||| ||||    
T  37552134 ggagccagaaattttatagagcctgggcaaaaaaattattgcaaaatgttacttccttcctgcgaataatttcacatttcctgcgga 37552048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 37654964 - 37654878
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacgga 187  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||||| ||||    
T  37654964 ggagccagaaattttatagagcctgggcaaaaaaattattgcaaaatgttacttccttcctgcgaataatttcacatttcctgcgga 37654878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 343
Target Start/End: Complemental strand, 37779767 - 37779633
Alignment:
Q  209 aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggtt 308  Q
    ||||||| | |||||||||||||||||||||||| | ||||||||||| ||| || ||||||||||||||||| |||| |||||| |||||||||||| |    
T  37779767 aaatcctagacaaaatctgcaggaaatgtgtttcatacggaatttacataaatattcgcaggtaaatccgcagaaaaaactaaaagttctagtaatggct 37779668  T
Q  309 gggtttgctacaaagaaagttgaagtcgaggctgg 343  Q
    |   |||||||||||||| ||| ||| ||| ||||    
T  37779667 gaacttgctacaaagaaaattggagttgagcctgg 37779633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 13942636 - 13942729
Alignment:
Q  89 gtgaacaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    |||| ||| |||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  13942636 gtgaccagtggcggagccagaaattttatagagcctgggtaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 13942729  T

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Target: chr5; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 2476588 - 2476504
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||    
T  2476588 ggcggagccagaaattatatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcct 2476504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 2476509 - 2476431
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaa 234  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  2476509 tttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaatccttgataaaatccgcaggaaa 2476431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 767380 - 767283
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||| ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||    |||||||||||||||||||||||| |||| ||    
T  767380 ggaatctaaatccttggcaaaacctgtaggaaatgtgtttcctgcggaatttatacaaaaatcc----gtaaatccgcaggaaaagctaaaagttcttgt 767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 189
Target Start/End: Original strand, 12267270 - 12267366
Alignment:
Q  93 acaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    |||| |||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||| |||||| ||||||||| || ||||||    
T  12267270 acagtggcggagccagacattttatagagcctgggcaaaaagtttatcgcaaaacgttacttccttcctgtgaataatttcacattttctgcggata 12267366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 14832797 - 14832860
Alignment:
Q  171 ttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaa 234  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  14832797 ttcacatttcctacggatatatctttcctgcggaatctaaatccttggcaaaatctacaggaaa 14832860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 15504177 - 15504088
Alignment:
Q  93 acaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    |||| |||||||||||||||| ||||||| || | |||||||||||| |||||| |||||||| ||||||||||||| ||||||||||||    
T  15504177 acagtggcggagccagaaattatatagagcctcgacaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcct 15504088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 37654878 - 37654774
Alignment:
Q  222 aatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaa 321  Q
    |||||||||||||||||||||||  |||||||||| ||  || ||||||||||||||||||||||| ||||| |||||||||| | |||  |||||| ||    
T  37654878 aatctgcaggaaatgtgtttcctatggaatttacataacaattcgcaggtaaatccgcaggaaaagataaaagttctagtaatagctggacttgctagaa 37654779  T
Q  322 agaaa 326  Q
    |||||    
T  37654778 agaaa 37654774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 9738436 - 9738351
Alignment:
Q  248 gaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaag 333  Q
    ||||||||||||| ||| |||||||||||||||||||| || | || ||||||||||||||||| ||||| |||||||||| ||||    
T  9738436 gaatttacacaaaaatctgcaggtaaatccgcaggaaatgcgagaagttctagtaatggttgggcttgcttcaaagaaagtagaag 9738351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 6900990 - 6900899
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    ||||||| ||||||||| ||||||| || | ||||||||||| |||||| |||||||| ||| ||||||||| |||||||||||| ||||||    
T  6900990 ggcggagacagaaatttaatagagtatgagtaaaaaatttatcgcaaaatgttacttccttcatgcgaataatttcacatttcctgcggata 6900899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 13694885 - 13694803
Alignment:
Q  262 atccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    |||||||| ||||||| |||||||||| | || |||||||||||| |||| |||||||||||||||||||||| ||| |||||    
T  13694885 atccgcagataaatccacaggaaaagcgagaagttctagtaatggatgggcttgctacaaagaaagttgaagttgagcctggg 13694803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 37607560 - 37607471
Alignment:
Q  209 aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttct 298  Q
    ||||||| | |||||||||||||||||||||||| | ||||||||||| ||| ||  |||||||||||||||| |||| |||||| ||||    
T  37607560 aaatcctagacaaaatctgcaggaaatgtgtttcatacggaatttacataaatatttgcaggtaaatccgcagaaaaaactaaaagttct 37607471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 6900813 - 6900720
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcga----ggctgggtggtggctccgcccctg 361  Q
    ||||| |||||||||||||||| |||||||||||| || | |||||||||||||||||| ||| ||    ||||||| ||||||||||||||||    
T  6900813 aaatctgcaggaaaagctaaaagttctagtaatggctgagcttgctacaaagaaagttggagttgaggctggctggggggtggctccgcccctg 6900720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 36234459 - 36234529
Alignment:
Q  110 aattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttc 180  Q
    ||||||||||||| ||| |||||||||||| |||||| |||||||| ||| ||||||||| ||||||||||    
T  36234459 aattttatagagtttggacaaaaaatttatcgcaaaatgttacttccttcttgcgaataatttcacatttc 36234529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 37552048 - 37551944
Alignment:
Q  222 aatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaa 321  Q
    ||||| |||||||||||||||||  | |||||||| ||  || ||||||||| ||||||||||||| ||||| |||||||||| | |||  |||||| ||    
T  37552048 aatctacaggaaatgtgtttcctatgaaatttacataacaattcgcaggtaactccgcaggaaaagataaaagttctagtaatagctggacttgctagaa 37551949  T
Q  322 agaaa 326  Q
    |||||    
T  37551948 agaaa 37551944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 2476444 - 2476390
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    |||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||    
T  2476444 aaatccgcaggaaaagctaaaaattctagtaatggtaggacttgctacaaagaaa 2476390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 30249185 - 30249123
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgc 163  Q
    |||||||| ||||||| |||||||||||||||||||||| |||||||||| |||  |||||||    
T  30249185 ggagccaggaattttacagagtctgggcaaaaaatttatcgcaaaacgttgctttcttcctgc 30249123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 36234588 - 36234654
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgca 268  Q
    ||||| |||| |||||| ||||||||||||||||| ||||||||| ||||||||| ||| |||||||    
T  36234588 ggaacttaaacccttggtaaaatctgcaggaaatgcgtttcctgctgaatttacataaaaatccgca 36234654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 7159609 - 7159662
Alignment:
Q  204 aacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacac 257  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||| |||||    
T  7159609 aacctaaattcttggcaaaatccgcaggaaacgtgtttcctgcggaatgtacac 7159662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 35469122 - 35469069
Alignment:
Q  102 gagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||| ||||||||    
T  35469122 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaatgttacttc 35469069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 767490 - 767430
Alignment:
Q  129 aaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||| ||||| || ||||||    
T  767490 aaaaaatttattgcaaaacgttactttcttcctgcgaataatttctcattttctgcggata 767430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 42989613 - 42989565
Alignment:
Q  221 aaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcag 269  Q
    ||||| |||||||||||||||||||||||||||||||||| || |||||    
T  42989613 aaatccgcaggaaatgtgtttcctgcggaatttacacaaaaattcgcag 42989565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 42989721 - 42989673
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaa 146  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  42989721 ggcggagtcaggaattttatagagtctggacaaaaaatttattgcaaaa 42989673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 13695096 - 13695029
Alignment:
Q  266 gcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaag 333  Q
    |||||||||||| |||||||||| | || |||||||||||| ||   |||||||||||||||||||||    
T  13695096 gcaggtaaatccacaggaaaagcgagaagttctagtaatggatgaacttgctacaaagaaagttgaag 13695029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 39605784 - 39605847
Alignment:
Q  148 gttacttctttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaa 211  Q
    |||||||| ||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||||    
T  39605784 gttacttcattcatgcggataattgcacatttcctgcggatatatctttcctgcggatcctaaa 39605847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 37779855 - 37779777
Alignment:
Q  109 aaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacgga 187  Q
    |||||||||||||  || |||||||| |||| | |||| |||||||| |||| |||||||| |||||||||||| ||||    
T  37779855 aaattttatagagcttgtgcaaaaaaattatcgtaaaatgttacttccttccagcgaataatttcacatttcctgcgga 37779777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 6900911 - 6900856
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaa 211  Q
    ||||||||| |||| |||||||||| | ||||||||||||||| ||||| ||||||    
T  6900911 tttcctgcggataatttcacatttcttgcggatatatctttcccgcggatcctaaa 6900856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 15436091 - 15436041
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaattt 253  Q
    |||| ||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  15436091 ggaatctaaatcctaggcaaaatccgcaggaaat-tgtttcctgcggaattt 15436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 15504093 - 15504038
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaa 211  Q
    ||||||||  |||| |||||||||||| ||||||||||||||| ||||| ||||||    
T  15504093 tttcctgcagataatttcacatttcctgcggatatatctttcccgcggatcctaaa 15504038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 37394967 - 37394932
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaa 133  Q
    |||||||||||||||||||||||||||| |||||||    
T  37394967 ggcggagccagaaattttatagagtctgagcaaaaa 37394932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 8214531 - 8214645
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttc-ctacggatatatcttt 196  Q
    |||||| |||| |||| || |||| || || |||||| |||| | |||| ||||| |  ||||||||||||| |||| ||||  || |||||||||||||    
T  8214531 ggcggaaccaggaattataaagagccttggtaaaaaaattatcgtaaaatgttacgtacttcctgcgaataatttcatatttgtctgcggatatatcttt 8214630  T
Q  197 cctgcggaacctaaa 211  Q
    |||||||| ||||||    
T  8214631 cctgcggatcctaaa 8214645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 37607648 - 37607570
Alignment:
Q  109 aaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacgga 187  Q
    |||||||||||||  || |||||||| |||| | |||| |||||||| |||| || ||||| |||||||||||| ||||    
T  37607648 aaattttatagagcttgtgcaaaaaaattatcgtaaaatgttacttccttccagcaaataatttcacatttcctgcgga 37607570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 231
Target Start/End: Complemental strand, 13695121 - 13695092
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcagg 231  Q
    ||||||||||||||||||||||||||||||    
T  13695121 ggaacctaaatccttggcaaaatctgcagg 13695092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 6900832 - 6900800
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaa 234  Q
    |||||||||||||||| ||||||||||||||||    
T  6900832 ggaacctaaatccttgacaaaatctgcaggaaa 6900800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 12317961 - 12318045
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaa 286  Q
    ||||||||||||||| ||||||||   ||||||| ||||||||||| ||||| |||  | || ||| ||||| ||||| ||||||    
T  12317961 ggaacctaaatccttagcaaaatccataggaaatttgtttcctgcgaaattttcacctaaattcgccggtaattccgctggaaaa 12318045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 98 - 344
Target Start/End: Original strand, 31844533 - 31844779
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  31844533 ggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcctacggatatatctttc 31844632  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  31844633 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatctgcaggtaaatccgtaggaaaagctaaaatttc 31844732  T
Q  298 tagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||||||||||||||||||| ||||||||||| ||| ||| |||||    
T  31844733 tagtaatggttgggtttgctagaaagaaagttggagttgagcctggg 31844779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 98 - 344
Target Start/End: Complemental strand, 6331888 - 6331642
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    |||||| |||| ||||||||||||  || ||||||||||||| ||||||||||||||| ||||| | ||||| |||||||||||||||||||||||||||    
T  6331888 ggcggaaccaggaattttatagagcatgagcaaaaaatttatcgcaaaacgttacttccttccttcaaataatttcacatttcctacggatatatctttc 6331789  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  6331788 ctgcggaacctaaatccttggcaaaatctgtaggaaatgtgtttcctgcggaatttacacaaaaatccggaggtaaacccgcaggaaaagctaaaatttc 6331689  T
Q  298 tagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    |||||||||||| |||||||||| ||||||||| || |||| |||||    
T  6331688 tagtaatggttgagtttgctacatagaaagttggagccgagcctggg 6331642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 98 - 330
Target Start/End: Complemental strand, 8239495 - 8239261
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| |||||||||||  || |||||||||||||| ||||||||||||||| |||||  |||||| |||||||||||||||||||||||||||    
T  8239495 ggcggagccaggaattttatagaacctaggcaaaaaatttatcgcaaaacgttacttccttcctatgaataatttcacatttcctacggatatatctttc 8239396  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaa--atgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatt 295  Q
    ||||||||||||||||||||||||||||||||||||  || | |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |    
T  8239395 ctgcggaacctaaatccttggcaaaatctgcaggaaatatatatttcctgcggaatttacacaaaaatccgcaggtaaatctgcaggaaaagctaaaaat 8239296  T
Q  296 tctagtaatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||||| ||| || |||||||||||||||    
T  8239295 tctagtaatggtagggattactacaaagaaagttg 8239261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 98 - 330
Target Start/End: Complemental strand, 14727553 - 14727300
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct--------------- 182  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||                   
T  14727553 ggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataatttcaca 14727454  T
Q  183 ------acggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatc 276  Q
          || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  14727453 tttcctacagatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaactccgcaggtaaatc 14727354  T
Q  277 cgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  14727353 cgcaggaaaagctaaaaattctagtaatggttggacttgctacaaagaaagttg 14727300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 98 - 330
Target Start/End: Original strand, 33468863 - 33469074
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||    
T  33468863 ggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacagatatatctttc 33468962  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||                     |||||||||||||||||||||||||||||    
T  33468963 ctgcggaacctaaatccttgacaaaatttgcaggaaatgtgtttcctacg---------------------ggtaaatccgcaggaaaagctaaaatttc 33469041  T
Q  298 tagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||||||||||  ||||||| |||||||||||    
T  33469042 tagtaatggttgaatttgctataaagaaagttg 33469074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 98 - 344
Target Start/End: Original strand, 27583909 - 27584160
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc-----------------tttcctgcgaataaattcacatttc 180  Q
    ||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||                 ||||||||  |||| ||||||||||    
T  27583909 ggcggagccaggaattttatagagcctgagcaaaaaatttatcgcaaaacgttacttcctgcgaataatttcacatttcctgcagataatttcacatttc 27584008  T
Q  181 ctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgca 280  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||    
T  27584009 ctacggatatatctttcctggggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------------aaatccgca 27584096  T
Q  281 ggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||||||||||| |||||||||||||| || |||||||||||||||||| || |||| |||||    
T  27584097 ggaaaagctaaaaattctagtaatggtttggcttgctacaaagaaagttggagccgagcctggg 27584160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 98 - 330
Target Start/End: Complemental strand, 27460901 - 27460678
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-tatc--- 193  Q
    ||||||||||  |||||||||||| ||||| ||||||||||| ||||||| ||||||| ||||||||||||| |||||||||||| | |||| | ||       
T  27460901 ggcggagccaagaattttatagagcctggg-aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcaca 27460803  T
Q  194 tttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaa 293  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||            ||||||||| ||||||||||||    
T  27460802 tttcctacggaacctaaatccttggcaaaatctgcaggaaatgtgtttccttcggaatttacacaa------------aaatccgcaagaaaagctaaaa 27460715  T
Q  294 tttctagtaatggttgggtttgctacaaagaaagttg 330  Q
     ||||||||||||||||| ||||||||||||||||||    
T  27460714 attctagtaatggttgggcttgctacaaagaaagttg 27460678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 166 - 330
Target Start/End: Original strand, 25011518 - 25011669
Alignment:
Q  166 ataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatcc 265  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||          
T  25011518 ataatttcacatttcctacggatatatctttc-tgcggaacctaaatccttggcaaaatctgcagaaaatgtgtttcctgcggaatttacacaa------ 25011610  T
Q  266 gcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
          |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  25011611 ------aaatccgcaggaaaagctaaaaattctagtaatggttgggcttgctacaaagaaagttg 25011669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 156 - 330
Target Start/End: Complemental strand, 25007608 - 25007446
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||   |||| ||||||||||||    
T  25007608 tttcctgcagataaattcacatttcctacggatatatctttcctgcagaacctaaatccttggcaaaatctgcaggaaatacatttcttgcggaatttac 25007509  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||            |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  25007508 acaa------------aaatccgcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttg 25007446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 330
Target Start/End: Original strand, 37153961 - 37154123
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  37153961 tttcctgcagataaattcacatttcctacggatatatctttcctgtggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttac 37154060  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||            |||||||||||||||||||||| ||||||||||||| | | || |||||||||||||||    
T  37154061 acaa------------aaatccgcaggaaaagctaaaaattctagtaatggtagagcttcctacaaagaaagttg 37154123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 330
Target Start/End: Complemental strand, 44305556 - 44305394
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  44305556 tttcctgcagataaattcacatttcctacggatatatctttcctgtggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttac 44305457  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||            |||||||||||||||||||||| |||||||||| || ||| || |||||||||||||||    
T  44305456 acaa------------aaatccgcaggaaaagctaaaaattctagtaattgtagggcttcctacaaagaaagttg 44305394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 48940438 - 48940561
Alignment:
Q  207 ctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatgg 306  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||    
T  48940438 ctaaatccttgacaaaatctgcatgaaatgtgtttcctgcggaatttacacaaaaatccgcaaataaatccgcaggaaaagctaaaagttctagtaatgg 48940537  T
Q  307 ttgggtttgctacaaagaaagttg 330  Q
     | || ||||||||||||| ||||    
T  48940538 cttggcttgctacaaagaatgttg 48940561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 34459342 - 34459231
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcct 199  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| ||||  ||||||| |||||||||||||| |||||||||||| |    
T  34459342 cggagccaggaattttatagagtctgggcaaaaaatttatcacaaaacgttacttccttcccacgaataatttcacatttcctacagatatatctttctt 34459243  T
Q  200 gcggaacctaaa 211  Q
    ||||| ||||||    
T  34459242 gcggatcctaaa 34459231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 49898609 - 49898498
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcct 199  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||||||||| ||||||||||||  ||||||||||||| |    
T  49898609 cggagccagaaattatatagagtctgggcaaaaaatttatcgcaaaatgttacgtccttcctgcgaataatttcacatttcctgtggatatatctttctt 49898510  T
Q  200 gcggaacctaaa 211  Q
    ||||| ||||||    
T  49898509 gcggatcctaaa 49898498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 9527276 - 9527181
Alignment:
Q  102 gagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||   ||||||||||||| ||||||||||||| |||||||||||||    
T  9527276 gagccagaaattttatagagtatgggcaaaaaatttatcgcaaaacgttactgtcttcctgcgaataatttcacatttcctatggatatatctttc 9527181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 1428404 - 1428468
Alignment:
Q  170 attcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaa 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1428404 attcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaa 1428468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 24745508 - 24745410
Alignment:
Q  204 aacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaa 303  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | || |||||||||||| ||  |||||||||| |||||||||    
T  24745508 aacctaaatccttggcaaaatctgcagaaaatgtgtttcctgcagaatttacacaaaaaaccacaggtaaatccgtag--aaagctaaaaattctagtaa 24745411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 4774195 - 4774104
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||  ||||||||||||| |||||||||| | ||||||    
T  4774195 ggcggagccagaaattttatagagtctgggcaaaaaaattatcgcaaaatgttactttcttcctgcgaataatttcacatttcttgcggata 4774104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 330
Target Start/End: Complemental strand, 9527143 - 9527027
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| |            |||||||||||||||||||||| |||||||    
T  9527143 ggaacctaaatccttggcaaaatctgcaggagatgtgtttcctgtgaaatttacacca------------aaatccgcaggaaaagctaaaagttctagt 9527056  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    ||||| |||| ||||||||||||||||||    
T  9527055 aatggctgggcttgctacaaagaaagttg 9527027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 330
Target Start/End: Complemental strand, 24646151 - 24646036
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||            |||||| ||||||||||||||| |||||||    
T  24646151 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctacggaatgtacacaa------------aaatccacaggaaaagctaaaagttctagt 24646064  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    |||||||| | ||||||||||||||||||    
T  24646063 aatggttgag-ttgctacaaagaaagttg 24646036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 44238875 - 44238992
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||||||||||| || |||||||||||||||| ||||||||| |||           ||||||||| ||||||||||||||||||||    
T  44238875 ggaacctaaatccttggcaaaatctacaagaaatgtgtttcctgcagaatttacaaaaa-----------aaatccgcaagaaaagctaaaatttctagt 44238963  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    ||||| |||| || |||||||||||||||    
T  44238964 aatggctgggctttctacaaagaaagttg 44238992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 25011429 - 25011500
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataa 169  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||| ||| |||||||||    
T  25011429 ggcggcgccagaaattttatagaatctgggcaaaaaaattatcgcaaaacgttacttccttcatgcgaataa 25011500  T

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Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 1428312 - 1428382
Alignment:
Q  99 gcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataa 169  Q
    |||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||| ||||| |||||||    
T  1428312 gcggagccaggaattttatagagcctgggcaaaaaatttaccgcaaaacgttacttccttcctacgaataa 1428382  T

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Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 6801980 - 6802089
Alignment:
Q  102 gagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcctgc 201  Q
    |||| |||||||||||||||| ||| |||||||||||| ||||||||||| ||| | | |||| |||| | |||||||||| | |||||| ||||||||     
T  6801980 gagcaagaaattttatagagtttggacaaaaaatttatcgcaaaacgttatttcctacatgcggataattgcacatttcctgcagatatacctttcctga 6802079  T
Q  202 ggaacctaaa 211  Q
    ||| ||||||    
T  6802080 ggatcctaaa 6802089  T

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Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 24646270 - 24646181
Alignment:
Q  99 gcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggat 188  Q
    |||||||||| |||||||||||| |||||||||||| ||||  ||||| |||||||| ||| ||||||||| |||| ||||||| |||||    
T  24646270 gcggagccaggaattttatagagcctgggcaaaaaaattatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggat 24646181  T

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Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 25007687 - 25007630
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||    
T  25007687 ggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttc 25007630  T

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Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 37153882 - 37153939
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||    
T  37153882 ggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttc 37153939  T

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Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 4641941 - 4642020
Alignment:
Q  110 aattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    |||||||||||| | | |||||||||  || ||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  4641941 aattttatagagcccgtgcaaaaaatcaatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcggata 4642020  T

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Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 24745628 - 24745540
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggat 188  Q
    ||||||||||| ||||||||||||||||||||||||| |||| ||  || |||||||  ||| ||||||||| |||||||||||| |||||    
T  24745628 ggcggagccaggaattttatagagtctgggcaaaaaaattatcgc--aatgttactttcttcatgcgaataatttcacatttcctgcggat 24745540  T

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Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 4774085 - 4773975
Alignment:
Q  222 aatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaa 321  Q
    ||||||||||||||||||||||||||||||||||| ||            | |||||||||||||||||||| |||||||||||| |||| |||||||||    
T  4774085 aatctgcaggaaatgtgtttcctgcggaatttacataa------------atatccgcaggaaaagctaaaagttctagtaatggctgggcttgctacaa 4773998  T
Q  322 agaaagttgaagtcgaggctggg 344  Q
    | ||| ||| ||| ||| |||||    
T  4773997 aaaaaattggagttgagtctggg 4773975  T

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Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 34459206 - 34459141
Alignment:
Q  203 gaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgca 268  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| || |||||  |||||||    
T  34459206 gaacttaaatccttggcaaaatctgcaggaaatgtgtttcctacggaaattccacaacaatccgca 34459141  T

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Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 44305635 - 44305578
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    ||||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||    
T  44305635 ggcggagccaggaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttc 44305578  T

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Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 6802113 - 6802247
Alignment:
Q  202 ggaacctaaatccttggcaaaatc----tgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
    ||||||||||||||||||||||||     ||||||||||||||||||| |||||||||| ||            ||||||||||||||||| | || |||    
T  6802113 ggaacctaaatccttggcaaaatccgcaggcaggaaatgtgtttcctgtggaatttacagaa------------aaatccgcaggaaaagcgagaagttc 6802200  T
Q  298 tagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||||||| || | |||||||||||||||| ||||| ||| |||||    
T  6802201 tagtaatggctgagcttgctacaaagaaagtagaagttgagcctggg 6802247  T

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Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 328
Target Start/End: Original strand, 4642089 - 4642201
Alignment:
Q  204 aacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaa 303  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| | |||||||| ||            |||||||||||||||||||||| |||||||||    
T  4642089 aacctaaatccttgacaaaatctgcaagaaatgtatttcctgtgaaatttacataa------------aaatccgcaggaaaagctaaaagttctagtaa 4642176  T
Q  304 tggttgggtttgctacaaagaaagt 328  Q
    ||| ||   ||||||||||||||||    
T  4642177 tggctgaacttgctacaaagaaagt 4642201  T

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Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 17875626 - 17875579
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaa 145  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  17875626 ggcggagccataaattttatagagtctgggcaaaaaatttatcgcaaa 17875579  T

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Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 1428455 - 1428513
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||| ||||||||| |||||| ||||||||||||| ||| ||||||||||||||||||    
T  1428455 aaatctgcaggaaaaactaaaaattctagtaatggtagggcttgctacaaagaaagttg 1428513  T

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Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 4642008 - 4642063
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaa 211  Q
    ||||||||| |||| |||| ||||||| ||||||||||||||||||||| ||||||    
T  4642008 tttcctgcggataatttcatatttcctgcggatatatctttcctgcggatcctaaa 4642063  T

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Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 42817819 - 42817784
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaa 133  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42817819 ggcggagccaggaattttatagagtctgggcaaaaa 42817784  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 48940328 - 48940378
Alignment:
Q  129 aaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacattt 179  Q
    |||||| |||||||||||| ||| |||||| |||||||||| |||||||||    
T  48940328 aaaaaaattattgcaaaactttatttctttactgcgaataatttcacattt 48940378  T

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Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 49898455 - 49898397
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||| |||||||||||||||| |||||||||||| ||   ||| ||||||||||||||    
T  49898455 aaatctgcaggaaaagctaaaacttctagtaatggctgaacttgttacaaagaaagttg 49898397  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 234
Target Start/End: Complemental strand, 49898471 - 49898442
Alignment:
Q  205 acctaaatccttggcaaaatctgcaggaaa 234  Q
    ||||||||||||||||||||||||||||||    
T  49898471 acctaaatccttggcaaaatctgcaggaaa 49898442  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 4163586 - 4163546
Alignment:
Q  93 acaggggcggagccagaaattttatagagtctgggcaaaaa 133  Q
    |||| |||||||||||||||||||||||||| | |||||||    
T  4163586 acagtggcggagccagaaattttatagagtccgagcaaaaa 4163546  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 33169338 - 33169370
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaa 234  Q
    |||||||||||||||||||||||| ||||||||    
T  33169338 ggaacctaaatccttggcaaaatccgcaggaaa 33169370  T

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Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 98 - 330
Target Start/End: Original strand, 26370934 - 26371166
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  26370934 ggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatctttc 26371033  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||    
T  26371034 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcaggtaaatccgcagaaaatgctaaaatttc 26371133  T
Q  298 tagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||||||||||| ||||||| ||| |||||||    
T  26371134 tagtaatggttggatttgctaaaaataaagttg 26371166  T

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Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 98 - 330
Target Start/End: Complemental strand, 37516850 - 37516618
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  37516850 ggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatctttc 37516751  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||| |||    
T  37516750 ctgcggaacctagatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaaaattccgcaggtaaatccgcaggaaaagctaaaaattc 37516651  T
Q  298 tagtaatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||||||  ||||||||||||||||||    
T  37516650 tagtaatggttggacttgctacaaagaaagttg 37516618  T

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Target: chr3; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 156 - 344
Target Start/End: Complemental strand, 7501106 - 7500918
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7501106 tttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgtaggaaatgtgtttcctgcggaatttac 7501007  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| || |||| |||||    
T  7501006 acaaacatccgcatgtaaatccgcaggaaaagctaaaaattctagtaatggttgggcttgctacaaagaaagttggagccgagcctggg 7500918  T

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Target: chr3; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 102 - 330
Target Start/End: Original strand, 25391741 - 25391957
Alignment:
Q  102 gagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcctgc 201  Q
    ||||||| ||||||||||||  |||||||||||||||| ||||||| ||||||| ||| | ||||||| |||||||||||||||||||||||||||||||    
T  25391741 gagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacattacttccttcttacgaataatttcacatttcctacggatatatctttcctgc 25391840  T
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||||||||| |||| |||||   |||| ||||||||||||||||            |||||||||||||||||||||| |||||||    
T  25391841 ggaacctaaatccttggcaaaatttgcaagaaatacatttcttgcggaatttacacaa------------aaatccgcaggaaaagctaaaaattctagt 25391928  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    |||||| ||| ||||||| ||||||||||    
T  25391929 aatggtagggcttgctacgaagaaagttg 25391957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 330
Target Start/End: Complemental strand, 53652048 - 53651886
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  53652048 tttcctgcagataaattcacatttcctacggatatatctttcctgcagaacctaaatccttggcaaaatctgcaggaaatgcatttcctgcggaatttac 53651949  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||            |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  53651948 acaa------------aaatccgcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttg 53651886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 156 - 330
Target Start/End: Complemental strand, 44047734 - 44047572
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  44047734 tttcctgcagataaattcacatttcctacggatatatctttcttgcggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttac 44047635  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||            |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  44047634 acaa------------aaatccgcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttg 44047572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 156 - 326
Target Start/End: Complemental strand, 14461215 - 14461057
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||    
T  14461215 tttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggacatacatttcctgcggaatttac 14461116  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    | ||            |||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||    
T  14461115 ataa------------aaatccgcaggaaaagttaaaaattctagtaatggtagggcttgctacaaagaaa 14461057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 156 - 330
Target Start/End: Complemental strand, 28311427 - 28311265
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||   |||||||||||||||||    
T  28311427 tttcctgcagataaattcacatttcctacggatatatctttccagcggaacctaaatccttggcaaaatctacaggaaatacatttcctgcggaatttac 28311328  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||            ||||||||||||||| |||||| ||||||||||||| ||| ||| ||||||||||||||    
T  28311327 acaa------------aaatccgcaggaaaaactaaaaattctagtaatggtagggcttgttacaaagaaagttg 28311265  T

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Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 203 - 328
Target Start/End: Original strand, 41218389 - 41218514
Alignment:
Q  203 gaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagta 302  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||| ||||||||    
T  41218389 gaacctaaattcttggcaaaatcggcaggaaatgtgtttcctgcggaatttagacaaaaatgcgcaagtaaatccgcaggaaaagctaaaagttctagta 41218488  T
Q  303 atggttgggtttgctacaaagaaagt 328  Q
    |||| |||| ||||||||| ||||||    
T  41218489 atggctgggcttgctacaaggaaagt 41218514  T

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Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 93 - 326
Target Start/End: Complemental strand, 26278564 - 26278343
Alignment:
Q  93 acaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatat 192  Q
    |||| |||||||| |||||||||||||||| | ||||||||| |||| |||||| | |||||| ||| ||||||||| ||||||||||||||| |   ||    
T  26278564 acagtggcggagcaagaaattttatagagtttaggcaaaaaaattatcgcaaaatgatacttccttcttgcgaataatttcacatttcctacgaa---at 26278468  T
Q  193 ctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaa 292  Q
    ||     || | |    |||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||| |||||||||||    
T  26278467 ct-----gcagga----aatcctaggcaaaatctgcaggaaatgtgtttcctccggaatttacataaaaatccgtaggtaaatccgcatgaaaagctaaa 26278377  T
Q  293 atttctagtaatggttgggtttgctacaaagaaa 326  Q
    | |||||||||||| | || ||||| ||||||||    
T  26278376 aattctagtaatggctaggcttgctccaaagaaa 26278343  T

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Target: chr3; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 166 - 330
Target Start/End: Complemental strand, 12909968 - 12909808
Alignment:
Q  166 ataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtg--------tttcctgcggaatttacac 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |        |||||||||||||||||||    
T  12909968 ataaattcacatttcctacggatatatctttcctgcggaacctaaatctttggcaaaatctgcaggaaatcagaaaatacatttcctgcggaatttacac 12909869  T
Q  258 aaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||            |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  12909868 aa------------aaatccgcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttg 12909808  T

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Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 98 - 333
Target Start/End: Complemental strand, 53988061 - 53987849
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaa-tttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatcttt 196  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||| |||| ||          
T  53988061 ggcggagccagaaattttatagagtccgggcaaaaaaatttattgcaaaatgttacttccttcctgcgaataatttcacatttcctgcgga-at------ 53987969  T
Q  197 cctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaattt 296  Q
     |||| |     ||||||| |||||||||||||||||||||||||||||||||||||||| ||            |||||||||||||||||||||| ||    
T  53987968 -ctgcag----gaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataa------------aaatccgcaggaaaagctaaaagtt 53987886  T
Q  297 ctagtaatggttgggtttgctacaaagaaagttgaag 333  Q
    ||||||||||||| | |  ||||||||||| ||||||    
T  53987885 ctagtaatggttgagctgactacaaagaaaattgaag 53987849  T

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Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 35077321 - 35077204
Alignment:
Q  209 aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggtt 308  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||| || | ||||||||||||||| ||||||||||| |||| | ||||| |    
T  35077321 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaattcccaggtaaatccgcagaaaaagctaaaagttctggcaatggct 35077222  T
Q  309 gggtttgctacaaagaaa 326  Q
      | ||||||||||||||    
T  35077221 acgcttgctacaaagaaa 35077204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 33179141 - 33179257
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||| ||||||||||||||||| |||||||    
T  33179141 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------------aaattcgcaggaaaagctaaaagttctagt 33179228  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    ||||| |||  |||||||||| |||||||    
T  33179229 aatggctggacttgctacaaaaaaagttg 33179257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 203 - 333
Target Start/End: Original strand, 41358632 - 41358763
Alignment:
Q  203 gaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaattt-acacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||| ||||||||||| |||||||||||||||   | ||||||| ||||||| ||||||| ||||||||| ||||||||| | || ||||| |    
T  41358632 gaacctaaatcattggcaaaatccgcaggaaatgtgtttttggaggaattttacacaaatatccgcaagtaaatccgtaggaaaagcgagaagttctaat 41358731  T
Q  302 aatggttgggtttgctacaaagaaagttgaag 333  Q
    |||||||| |||||||||||||||||| ||||    
T  41358732 aatggttgagtttgctacaaagaaagtagaag 41358763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 43700164 - 43700242
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaa 234  Q
    ||||||||  |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43700164 tttcctgcagataatttcacatttccaacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaa 43700242  T

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Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 33178984 - 33179065
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacattt 179  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  33178984 ggcggagtcaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcattcctgcgaataatttcacattt 33179065  T

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Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 41218247 - 41218331
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  41218247 ggcggagtcaggaattttatagagtctaggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 41218331  T

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Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 53068346 - 53068278
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  53068346 ggaacctaaattcttggcaaaatctgcaggaaatgtgtttcctgtggaatttacacaaaaatccgcagg 53068278  T

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Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 43700085 - 43700169
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||||| ||||||||||||||||  |||| ||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||    
T  43700085 ggcggagtcagaaattttatagagcttgggtaaaaaatatatcgcaaaacgttacttcttttctgcgaataatttcacatttcct 43700169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 43700229 - 43700287
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  43700229 aaatctgcaggaaaagctaaaaattctagtaatggttgggcttgctacaaagaaagttg 43700287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 28311506 - 28311449
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||    
T  28311506 ggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacattacttc 28311449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 44625744 - 44625672
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||| |||||||||||||||| |||||||||| |||||| |||||||||||||||||| || |||| |||||    
T  44625744 aaatctgcaggaaaagctaaaaattctagtaatagttgggcttgctacaaagaaagttggagccgagcctggg 44625672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 44047812 - 44047750
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcct 161  Q
    ||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  44047812 ggcggagccaggaatttt-tagagtctggacaaaaaatttatcgcaaaacgttacttctttcct 44047750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 9600447 - 9600386
Alignment:
Q  209 aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||    
T  9600447 aaatcctaagcaaaatctgcaggaaatgtgtttcctgcagaatttacataaaaatccgcagg 9600386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 12910055 - 12909998
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||    
T  12910055 ggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaatcgttacttc 12909998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 14461294 - 14461237
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    ||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||    
T  14461294 ggcggagccaggaattttatagagcctgggcaaaaaatttatcacaaaacgttacttc 14461237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 38239555 - 38239502
Alignment:
Q  204 aacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacac 257  Q
    |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  38239555 aacctaaatccttggcaaaatccgcagaaaatgtgtttcctgcagaatttacac 38239502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 53652127 - 53652073
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttac 152  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||||| ||||    
T  53652127 ggcggagccaggaattttatagagtctggacaaaaaatttatcgcaaaacattac 53652073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 9600396 - 9600342
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||||||||||||||| |||| |||||||||||| |||| || |||||||||||    
T  9600396 aaatccgcaggaaaagccaaaagttctagtaatggctgggattactacaaagaaa 9600342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 41358513 - 41358601
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggat 188  Q
    |||||||| ||||||||| |||||| ||| ||||||| |||| ||||||||||| ||| |||||||| |||| | |||||||||| |||||    
T  41358513 ggcggagcaagaaatttt-tagagt-tggacaaaaaaattatcgcaaaacgttatttccttcctgcggataattgcacatttcctgcggat 41358601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 53068288 - 53068230
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||||||||| ||||| |||||||||||| |||  ||| ||||||||||||||    
T  53068288 aaatccgcaggaaaagttaaaacttctagtaatggctggacttgttacaaagaaagttg 53068230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 30172693 - 30172616
Alignment:
Q  209 aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaa 286  Q
    |||||||| |||||||||| ||||||  | |||||||| ||||||| || || | |||||||||| ||||||||||||    
T  30172693 aaatccttagcaaaatctgtaggaaaactatttcctgcagaatttataccaaaagccgcaggtaattccgcaggaaaa 30172616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 36870023 - 36869966
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa 259  Q
    |||||||||||||||| |||||||   |||||| | ||||||||||||||||||||||    
T  36870023 ggaacctaaatccttgacaaaatccttaggaaacgggtttcctgcggaatttacacaa 36869966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 51408472 - 51408517
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgcaaa 145  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||    
T  51408472 cggagccagaaattttatagaatctgggcaaaaagtttatcgcaaa 51408517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 4293401 - 4293318
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaa 286  Q
    ||||||||| ||||| |||||||| |||||||||| ||||||||||||| || ||| ||  ||||||| | | ||||||||||||    
T  4293401 ggaacctaagtccttagcaaaatccgcaggaaatg-gtttcctgcggaaatttcaccaaactccgcagatgattccgcaggaaaa 4293318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 7501185 - 7501129
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttactt 154  Q
    ||||||||||| |||||||||||| || |  ||||||||||| ||||||||||||||    
T  7501185 ggcggagccaggaattttatagagcctcgataaaaaatttatcgcaaaacgttactt 7501129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 43447660 - 43447620
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttc 242  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  43447660 ggaagctaaatccttggcaaaatctgcaggaaacgtgtttc 43447620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 4245823 - 4245898
Alignment:
Q  208 taaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcagga 283  Q
    ||||||||||| |||||| ||||||||   || ||||||||||||| |||  | |||||||||||| |||||||||    
T  4245823 taaatccttggtaaaatccgcaggaaacaggtgtcctgcggaattttcacccaaatccgcaggtaattccgcagga 4245898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 31989341 - 31989295
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaa 144  Q
    |||| |||||||||||| |||||| ||||||||||||||||| ||||    
T  31989341 ggcgaagccagaaatttcatagagcctgggcaaaaaatttatcgcaa 31989295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 47511667 - 47511729
Alignment:
Q  208 taaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    |||||| || |||||||| |||||||||||||||||| |  |||||| ||||| |||||||||    
T  47511667 taaatctttagcaaaatccgcaggaaatgtgtttccttcaaaatttatacaaaaatccgcagg 47511729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 497453 - 497401
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaattta 254  Q
    ||||||||||||||| |||||||| | ||||||||||||| || |||| ||||    
T  497453 ggaacctaaatccttagcaaaatccgtaggaaatgtgtttgctacggatttta 497401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 41199946 - 41199978
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaa 234  Q
    |||||||||||||||||||||||| ||||||||    
T  41199946 ggaacctaaatccttggcaaaatccgcaggaaa 41199978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 174; Significance: 2e-93; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 110 - 343
Target Start/End: Original strand, 26722863 - 26723096
Alignment:
Q  110 aattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcctgcggaaccta 209  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  26722863 aattttatagagcttgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcttacggatatatctttcctgcggaaccta 26722962  T
Q  210 aatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttg 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26722963 aatccttgacaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaatccgcaggtaaatccgtaggaaaagctaaaatttctagtaatggttg 26723062  T
Q  310 ggtttgctacaaagaaagttgaagtcgaggctgg 343  Q
    | ||||||||||| ||||||| || |||| ||||    
T  26723063 gatttgctacaaaaaaagttggagccgagcctgg 26723096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 156 - 330
Target Start/End: Original strand, 35300399 - 35300573
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  35300399 tttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttac 35300498  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||| ||||||||||||||||||    
T  35300499 acaaaaatccgcaggtaaatccgcaggaaaagctaaacattctagtaatggtagggcttgctacaaagaaagttg 35300573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 98 - 326
Target Start/End: Original strand, 7873112 - 7873349
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-tatc--- 193  Q
    ||||||||| ||||||||||||||||||||||||||| |||| |||||| |||||||| |||| || ||||| |||||||||||| |||||| | ||       
T  7873112 ggcggagcctgaaattttatagagtctgggcaaaaaaattatcgcaaaatgttacttccttcccgctaataatttcacatttcctgcggataatttcaca 7873211  T
Q  194 tttcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagc 288  Q
    |||| || |||| ||     ||||||| |||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||| ||||||    
T  7873212 tttcatgtggaatctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaacccgcaggtaaatccgcagaaaaagc 7873311  T
Q  289 taaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  7873312 taaaagttctagtaatggttgggcttgctacaaagaaa 7873349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 110 - 330
Target Start/End: Original strand, 41759531 - 41759753
Alignment:
Q  110 aattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatt---tcctacggatatatctttcctgcggaac 206  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||| |    ||||| ||   || ||   || ||||||    
T  41759531 aattttatagagtctgggcaaaaaatttatcgcacaacgttacttccttcctgcgaataatttcacctcggatcctatggtgttacctcaact-cggaac 41759629  T
Q  207 ctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatgg 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || ||||||| ||| |||||||||||| ||||||||||||    
T  41759630 ctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacaccaaaatccacaagtaaatctgcaagaaaagctaaaagttctagtaatgg 41759729  T
Q  307 ttgggtttgctacaaagaaagttg 330  Q
     |||| ||||||||||||||||||    
T  41759730 ctgggcttgctacaaagaaagttg 41759753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 98 - 344
Target Start/End: Original strand, 5991312 - 5991564
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-tatc--- 193  Q
    ||||||| | |||||||||||||| |||||||||||| |||| |||||| |||||||| ||||||||||||| || ||||||| | |||||| | ||       
T  5991312 ggcggagtcggaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataattttacatttcttgcggataatttcaca 5991411  T
Q  194 tttcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagc 288  Q
    |||||||| ||| ||     ||||||| |||||||||||||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||| |    
T  5991412 tttcctgcagaatctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaac---cgcaggtaaatccgcaggaaaaac 5991508  T
Q  289 taaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||| |||||||||||| |||| |||||||||||||| ||| ||| ||| |||||    
T  5991509 taaaagttctagtaatggctgggcttgctacaaagaaaattggagttgagcctggg 5991564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 98 - 326
Target Start/End: Original strand, 22206578 - 22206815
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-tatc--- 193  Q
    |||||||| ||||||||||||||| |||||||| ||| |||| |||||| |||||||| ||||||||||||| |||||||||||| |||||| | ||       
T  22206578 ggcggagcaagaaattttatagagcctgggcaagaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcggataatctcaca 22206677  T
Q  194 tttcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagc 288  Q
    |||||||||||| ||     |||||||  | ||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||||    
T  22206678 tttcctgcggaatctgcaggaaatcctaagtaaaatctgcaggaaatgtgtttcctgcggaatttacataaacactcgtaggtaaatccgcaggaaaagc 22206777  T
Q  289 taaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||| || ||||||||  |||| ||||||||||||||    
T  22206778 taaaaattatagtaatgcctgggcttgctacaaagaaa 22206815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 98 - 326
Target Start/End: Complemental strand, 22228161 - 22227924
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-tatc--- 193  Q
    |||||||| ||||||||||||||| |||||||| ||| |||| |||||| |||||||| ||||||||||||| |||||||||||| |||||| | ||       
T  22228161 ggcggagcaagaaattttatagagcctgggcaagaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcggataatctcaca 22228062  T
Q  194 tttcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagc 288  Q
    |||||||||||| ||     |||||||  | ||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||||    
T  22228061 tttcctgcggaatctgcaggaaatcctaagtaaaatctgcaggaaatgtgtttcctgcggaatttacataaacactcgtaggtaaatccgcaggaaaagc 22227962  T
Q  289 taaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||| || ||||||||  |||| ||||||||||||||    
T  22227961 taaaaattatagtaatgcctgggcttgctacaaagaaa 22227924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 156 - 286
Target Start/End: Original strand, 23704440 - 23704570
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  23704440 tttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgttttcggcggaatttac 23704539  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaa 286  Q
    ||||| |||| ||||||||||||||||||||    
T  23704540 acaaaaatccacaggtaaatccgcaggaaaa 23704570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 202 - 331
Target Start/End: Complemental strand, 3012408 - 3012279
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  3012408 ggaacctatatccttggcaaaatctgcaggaagtgtgtttcctgcggaatgtacacaaaaatcggcaggtaaatccgcaggaaaagctaaaagttctagt 3012309  T
Q  302 aatggttgggtttgctacaaagaaagttga 331  Q
    |||||||||| |||||||||||||||||||    
T  3012308 aatggttgggcttgctacaaagaaagttga 3012279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 3012545 - 3012432
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||||    
T  3012545 ggcggagccagaaattttatagagtctgggcaaaaaaattattgcaaaacgttacttccttcctgtgaataatttcacatttcctgcggatatatctttc 3012446  T
Q  198 ctgcggaacctaaa 211  Q
    ||||||| ||||||    
T  3012445 ctgcggatcctaaa 3012432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 98 - 326
Target Start/End: Original strand, 25688103 - 25688319
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    |||||||||||||||||||||||| ||||| |||||| |||| | |||| |||||||| || ||| |||||| |||||||||||| ||||   ||||       
T  25688103 ggcggagccagaaattttatagagcctgggtaaaaaaattatcgtaaaatgttacttcctttctgtgaataatttcacatttcctgcgga---atct--- 25688196  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
      || | |    |||||| ||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||| |||||||||||||||| ||     
T  25688197 --gcagga----aatcctaggcaaaatctgcaggaaatatgtttcctgcggaatttacataaacatttgcaggtaaatctgcaggaaaagctaaaagttt 25688290  T
Q  298 tagtaatggttgggtttgctacaaagaaa 326  Q
    ||||||||| || | ||||||||||||||    
T  25688291 tagtaatggctgagcttgctacaaagaaa 25688319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 330
Target Start/End: Complemental strand, 19377490 - 19377365
Alignment:
Q  205 acctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaat 304  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||| ||| |||||| ||||| | ||||||||    
T  19377490 acctaaatccttggcaaaatctgcaggaaatgtatttccttcggaatttccacaaacatccgcaggtaaatctgcaagaaaagttaaaactactagtaat 19377391  T
Q  305 ggttgggtttgctacaaagaaagttg 330  Q
    || |||  ||| ||||||||||||||    
T  19377390 ggctggagttgttacaaagaaagttg 19377365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 4843402 - 4843298
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||| ||||||||||| |||||||||||||| ||||||     
T  4843402 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatgtacacaaatatccgtaggtaaatccgaaggaaaagctaaaagttctaga 4843303  T
Q  302 aatgg 306  Q
    |||||    
T  4843302 aatgg 4843298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 38991076 - 38991245
Alignment:
Q  105 ccagaaattttatagagtctgggcaaaaaatttattgcaaaacgtta-cttctttcctgcgaataaattcacatttcctacggata-tatc---tttcct 199  Q
    |||| |||||||||||||| || ||||||| |||| ||||||||||| |||||| ||||||||||| |||| |||||||||| ||| | ||   ||| ||    
T  38991076 ccaggaattttatagagtccggacaaaaaagttatcgcaaaacgttatcttctt-cctgcgaataatttcatatttcctacgaataatttcacattttct 38991174  T
Q  200 gcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| ||||| |||||||||    
T  38991175 gcggatcctaaatccttggcaaaatctgcaggaaatgtgtttccaacggaatttatacaaaaatccgcagg 38991245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 28694057 - 28694184
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||| |||| | ||| |||||||    
T  28694057 ggaacctaaatcctgggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaaaaatccgcagctaaatccg-aggcaaagtttaaagttctagt 28694155  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    |||||  |   ||||||||||||||||||    
T  28694156 aatggcggaacttgctacaaagaaagttg 28694184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 42439462 - 42439553
Alignment:
Q  106 cagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||| |||||||||||||||||    
T  42439462 cagaaattttatagggtctgggcaaaaaatttatcgcaaaacgttacttcttttctacgaataatttcacattttctacggatatatctttc 42439553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 814865 - 814978
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| |||| |||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||| ||||||||| || ||||||||||||||    
T  814865 ggcggagccaggaattatatagagtctgggcaaaaaaattatcgcaaaacgttacttcattcctgctaataatttcacattttctgcggatatatctttc 814964  T
Q  198 ctgcggaacctaaa 211  Q
     ||| || ||||||    
T  814965 gtgcagatcctaaa 814978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 21932634 - 21932718
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||| |||||||    
T  21932634 ggcggagtcaggaattttatagagtctgggcaaaaaatttatcgcaaaatgttacttctttcctgcgaataatttcatatttcct 21932718  T

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Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 204 - 344
Target Start/End: Original strand, 21932798 - 21932925
Alignment:
Q  204 aacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaa 303  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||             ||||||||||| ||||| || ||||||    
T  21932798 aacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaatttacacaaatat-------------cgcaggaaaagttaaaagttttagtaa 21932884  T
Q  304 tggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    |||||||| |||||||||||||||||| ||| ||| |||||    
T  21932885 tggttgggcttgctacaaagaaagttggagttgagcctggg 21932925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 38129010 - 38129094
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaa 286  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||| | |||||||||    
T  38129010 ggaacctaaatccttggcaaaatatgcaggaaatgtgtttccttcagaatttacacaaaaatccgcaggtaaaactgcaggaaaa 38129094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 21688211 - 21688145
Alignment:
Q  204 aacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21688211 aacctaaatccttcgcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcagg 21688145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 4843531 - 4843452
Alignment:
Q  110 aattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    ||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  4843531 aattttatagagcttgagcaaaaaatttatcgcaaaacgttacttctttcctgcgaataatttcacatttcctgcggata 4843452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 38128876 - 38128986
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcctg 200  Q
    |||||||||||||||||| | ||| |||||||| ||||| ||||||||||| ||| |||||||  |||| |||||||||||| |  ||||||||||||||    
T  38128876 ggagccagaaattttataaaatctaggcaaaaattttatcgcaaaacgttatttccttcctgcagataatttcacatttcctgcacatatatctttcctg 38128975  T
Q  201 cggaacctaaa 211  Q
    |||| ||||||    
T  38128976 cggatcctaaa 38128986  T

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Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 28693897 - 28693986
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    ||||||||| |||||||||||| |||||||||||| |||| ||||||| ||||||| || |||||||||| |||||||||||| ||||||    
T  28693897 cggagccaggaattttatagagcctgggcaaaaaaattatcgcaaaactttacttcctttctgcgaataatttcacatttcctccggata 28693986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 274
Target Start/End: Original strand, 42439591 - 42439663
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaa 274  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  || |||||||||    
T  42439591 ggaacctaaatccttggcaaaatctgcagaaaatgtgtttcctgcgaaatttacacaaaactctgcaggtaaa 42439663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 815002 - 815118
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||            ||||||| |||||||||||||| |||||||    
T  815002 ggaacctaaattcttggcaaaatctgcaagaaatgtattttctgcggaatttacacaa------------aaatccgtaggaaaagctaaaagttctagt 815089  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    ||||| | | |||||||||||||||||||    
T  815090 aatggctagatttgctacaaagaaagttg 815118  T

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Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 270
Target Start/End: Complemental strand, 30852531 - 30852373
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcct 199  Q
    |||||||||||||||| |||| |||||| |||||| |||| |||||| ||| |||| ||||||||||||| |||||||||||| |||| ||       ||    
T  30852531 cggagccagaaattttttagaatctggggaaaaaaattatcgcaaaatgttgcttccttcctgcgaataatttcacatttcctgcgga-at-------ct 30852440  T
Q  200 gcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    || |     ||||||| ||||||||||| |||||||||||||||||||||||||||| |||  ||||||||    
T  30852439 gcag----gaaatcctaggcaaaatctgaaggaaatgtgtttcctgcggaatttacataaaattccgcagg 30852373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 5850808 - 5850707
Alignment:
Q  225 ctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaaga 324  Q
    ||||||||||||||||| |||| ||||||||||||   || |||| ||||||||||||||||| ||||| |||||||||||| |||  ||| ||||||||    
T  5850808 ctgcaggaaatgtgttttctgcagaatttacacaacattctgcagataaatccgcaggaaaagttaaaacttctagtaatggctggacttgttacaaaga 5850709  T
Q  325 aa 326  Q
    ||    
T  5850708 aa 5850707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 41862238 - 41862351
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| ||||||||||| |||| | ||||||||||| |||||||  |||||| || ||||| |||| |  ||||||||| |||||||| |||||    
T  41862238 ggcggagccaggaattttatagaatctgagtaaaaaatttatcgcaaaacaatacttcatttctgcggataattatacatttcctgcggatatacctttc 41862337  T
Q  198 ctgcggaacctaaa 211  Q
    ||| ||| ||||||    
T  41862338 ctgtggatcctaaa 41862351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 19377623 - 19377554
Alignment:
Q  110 aattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacattt 179  Q
    |||| |||||||||||||||||||| |||| |||||| ||||  |||||||||||||||| |||||||||    
T  19377623 aattatatagagtctgggcaaaaaaattatcgcaaaatgttatgtctttcctgcgaataatttcacattt 19377554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 21688372 - 21688288
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||||| ||| ||||||||||| ||| ||||||||||||||  ||||| |||||| || | ||| |||||| ||||||||||||    
T  21688372 ggcggagtcaggaattttatagaatctaggcaaaaaatttatcacaaaatgttactgctattctgtgaataatttcacatttcct 21688288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 23704364 - 23704432
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataa 169  Q
    |||| ||| ||||||||||||| |||  ||||||||||| | ||||||||||||||||| |||||||||    
T  23704364 ggagtcaggaattttatagagtttggataaaaaatttatcgtaaaacgttacttctttcttgcgaataa 23704432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 27387163 - 27387215
Alignment:
Q  92 aacaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaa 144  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  27387163 aacagtggcggagccagaaatttcatagagcctgggcaaaaaatttatcgcaa 27387215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 19400294 - 19400247
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaa 145  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  19400294 ggcggagccagaaattttatagagcctgggcaaaaagtttatcgcaaa 19400247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 45197953 - 45197906
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaa 145  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||    
T  45197953 ggcggagccagaaattctatagagtgtgggcaaaaaatttatcgcaaa 45197906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 35300320 - 35300377
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    ||||||||||| ||||||||||||  |||| ||||||||||| | |||||||||||||    
T  35300320 ggcggagccaggaattttatagagcttgggaaaaaaatttatcgtaaaacgttacttc 35300377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 25491497 - 25491531
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaa 132  Q
    |||||||||||| ||||||||||||||||||||||    
T  25491497 ggcggagccagatattttatagagtctgggcaaaa 25491531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 6113616 - 6113579
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaat 135  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  6113616 ggcggagccagaaattttatacagtctgggaaaaaaat 6113579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 10224205 - 10224164
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttat 139  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||    
T  10224205 ggcggagccagaaattttacagagtctggacaaaaaaattat 10224164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 305
Target Start/End: Complemental strand, 21688155 - 21688122
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatg 305  Q
    |||||||||||||||||||||| |||||||||||    
T  21688155 aaatccgcaggaaaagctaaaagttctagtaatg 21688122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 1756821 - 1756869
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaa 250  Q
    ||||||||||||| ||||||| || ||||||||  ||||||||||||||    
T  1756821 ggaacctaaatccatggcaaattccgcaggaaacatgtttcctgcggaa 1756869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 2e-93; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 98 - 327
Target Start/End: Complemental strand, 10058740 - 10058511
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  10058740 ggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatctttc 10058641  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||||||||| |||    
T  10058640 ctgcggaacctaaatccttggtaaaatctgctggaaatgtgtttcctgcggaatttacacaaaattccccaggtaaatccgcgggaaaagctaaaaattc 10058541  T
Q  298 tagtaatggttgggtttgctacaaagaaag 327  Q
    | |||||||||||| |||||||||||||||    
T  10058540 tcgtaatggttgggcttgctacaaagaaag 10058511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 98 - 344
Target Start/End: Complemental strand, 31364338 - 31364104
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||     
T  31364338 ggcggagccagaaattttatagagcatgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatctttt 31364239  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||| ||||||||||    
T  31364238 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------------aaatccgcaggaaaaactaaaatttc 31364151  T
Q  298 tagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||||||||||| ||||||||||||||||||| || |||| |||||    
T  31364150 tagtaatggttggatttgctacaaagaaagttggagccgagcctggg 31364104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 166 - 344
Target Start/End: Complemental strand, 4728693 - 4728515
Alignment:
Q  166 ataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatcc 265  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  4728693 ataatttcacatttcctacagatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttactcaaaaatcc 4728594  T
Q  266 gcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    |||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||| || |||| |||||    
T  4728593 gcaggtaaatccgcaggaaaagctaaaaattctagtaatggtttggcttgctacaaagaaagttggagccgagtctggg 4728515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 98 - 330
Target Start/End: Complemental strand, 46645827 - 46645574
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct--------------- 182  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||                   
T  46645827 ggcggagccaggaattttatagagtctgggaaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtatataatttcata 46645728  T
Q  183 ------acggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatc 276  Q
          |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||    
T  46645727 ttttctacggatatatctttcctgcggaacctaaactcttggcaaaatctgcatgaaatgtgtttcctgcagaatttacacaaaaatccgcaggtaaatc 46645628  T
Q  277 cgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  46645627 cgcagaaaaagctaaaaattctagtaatggttgggcttgctacaaaggaagttg 46645574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 174 - 330
Target Start/End: Complemental strand, 2576299 - 2576142
Alignment:
Q  174 acatttcctacggatatatctttcctgcggaacctaaatccttggcaaaa-tctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggta 272  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||| || |||| |||    
T  2576299 acatttcctacggatatatatttcctgcggaacctacatccttggcaaaaatctgcaggaaatgtgtttcctgcggaatttatacaaaaattcgcaagta 2576200  T
Q  273 aatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||| ||||| ||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  2576199 aattcgcagaaaaagctaaaaattcttgtaatggttgggcttgctacaaagaaagttg 2576142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 98 - 330
Target Start/End: Complemental strand, 4552409 - 4552168
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc---------------------tttcctgcgaataaattcaca 176  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||                     ||||||||  |||||||||||    
T  4552409 ggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctacaaataatttcacatttcctgcagataaattcaca 4552310  T
Q  177 tttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatc 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||             |||||    
T  4552309 tttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacaca------------caaatc 4552222  T
Q  277 cgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  4552221 cgcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttg 4552168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 98 - 326
Target Start/End: Complemental strand, 9003779 - 9003543
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata-tatc--- 193  Q
    ||||||| |||||||||||||||| |||| ||||||| |||| |||||| |||||||| ||| ||||||||| ||||||||||||| ||||| | ||       
T  9003779 ggcggagtcagaaattttatagagcctggacaaaaaaattatcgcaaaatgttacttccttcttgcgaataatttcacatttcctatggataatttcaca 9003680  T
Q  194 tttcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagc 288  Q
    |||||||||||| ||     ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || |||||     
T  9003679 tttcctgcggaatctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaa-atccgcaggtaaatccgaagaaaaagt 9003581  T
Q  289 taaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||| |||| ||||||  |||| ||||||||||||||    
T  9003580 taaaagttcttgtaatgactgggcttgctacaaagaaa 9003543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 156 - 344
Target Start/End: Complemental strand, 10715801 - 10715623
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgca-ggaaatgtgtttcctgcggaattta 254  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  10715801 tttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcagggcaatgtgtttcctgcggaattta 10715702  T
Q  255 cacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgc-tacaaagaaagttgaagtcgaggctggg 344  Q
    |||||            |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||| || |||| |||||    
T  10715701 cacaa------------aaatccgcaggaaaagctaaaaattctagtaatggttgggcttgcttacaaagaaagttggagccgagcctggg 10715623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 156 - 344
Target Start/End: Complemental strand, 10929571 - 10929393
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgca-ggaaatgtgtttcctgcggaattta 254  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  10929571 tttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcagggcaatgtgtttcctgcggaattta 10929472  T
Q  255 cacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgc-tacaaagaaagttgaagtcgaggctggg 344  Q
    |||||            |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||| || |||| |||||    
T  10929471 cacaa------------aaatccgcaggaaaagctaaaaattctagtaatggttgggcttgcttacaaagaaagttggagccgagcctggg 10929393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 98 - 326
Target Start/End: Complemental strand, 14044548 - 14044332
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||| ||||| || |||||| |||||| |||||||||||| |||| ||||         
T  14044548 ggcggagccagaaattttatagagtatgggcaaaaaaattatcgcaaaatgttacctccttcctgagaataatttcacatttcctgcgga-atat----- 14044455  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
      || | |    |||||| |||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||     
T  14044454 --gcagga----aatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaattcgcaggtaaatccgcaggaaaagctaaaaattt 14044361  T
Q  298 tagtaatggttgggtttgctacaaagaaa 326  Q
    | ||||||| | || ||||||||||||||    
T  14044360 tcgtaatggcttggcttgctacaaagaaa 14044332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 202 - 330
Target Start/End: Complemental strand, 25237675 - 25237547
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||| |||||||    
T  25237675 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaattccgcaggtaaatccgcagaaaacgctaaaagttctagt 25237576  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    ||||  |||  || |||||||||||||||    
T  25237575 aatgactggacttactacaaagaaagttg 25237547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 166 - 330
Target Start/End: Original strand, 2017418 - 2017570
Alignment:
Q  166 ataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatcc 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||   |||||||||||||||||||||          
T  2017418 ataaattcacatttcctacggatatatctttcctgcggaacctaaatacttggcaaaatctgcgggaaatacatttcctgcggaatttacacaa------ 2017511  T
Q  266 gcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
          |||||||||||||||||||||| ||||||||||||| | | ||||||||||||||||||    
T  2017512 ------aaatccgcaggaaaagctaaaaattctagtaatggtagagcttgctacaaagaaagttg 2017570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 166 - 333
Target Start/End: Complemental strand, 40969359 - 40969204
Alignment:
Q  166 ataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatcc 265  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||          
T  40969359 ataatttcacatttcctacggatatatctttcctgcggaacctaaatcattgacaaaatctgcagaaaatgtgtttcctgcagaatttacacaa------ 40969266  T
Q  266 gcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaag 333  Q
          |||||||||||||||||||||| ||||  ||||||||||  |||||||||||||||||||||    
T  40969265 ------aaatccgcaggaaaagctaaaaattctcataatggttggacttgctacaaagaaagttgaag 40969204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 99 - 330
Target Start/End: Original strand, 41972335 - 41972570
Alignment:
Q  99 gcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggat---------- 188  Q
    |||||||||| ||||||||| | ||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||||| || |||||              
T  41972335 gcggagccaggaattttataaaatctggtcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacattttctgcggatcctaaaatct 41972434  T
Q  189 ----atat---ctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcag 281  Q
        ||||   ||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||    
T  41972435 taagatattacctcacctg-ggaaccttaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------------aaatccgcag 41972521  T
Q  282 gaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||    
T  41972522 gaaaagctaaaagttctagtaatggttcggcttgctacaaagaaagttg 41972570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 98 - 330
Target Start/End: Complemental strand, 50384097 - 50383871
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggat-atatc--- 193  Q
    ||||||||||  |||||||||||| ||||||||||||   |||||||||||||||||| ||||||||||||| || | | ||||| ||||| || ||       
T  50384097 ggcggagccaagaattttatagagcctgggcaaaaaaaa-attgcaaaacgttacttccttcctgcgaataattttataattcctgcggattatttcaca 50383999  T
Q  194 tttcctgcggaacctaaa---tccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagcta 290  Q
    |||||| |||| ||||||   |||||||||||||||||||||||||||||||||||  ||||||| ||||||||||            ||||||||||||    
T  50383998 tttcctacggatcctaaaatatccttggcaaaatctgcaggaaatgtgtttcctgcaaaatttacgcaaacatccg------------caggaaaagcta 50383911  T
Q  291 aaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||| |||||||||||| |||| ||||||||||||||||||    
T  50383910 aaagttctagtaatggctgggcttgctacaaagaaagttg 50383871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 43003076 - 43003160
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  43003076 ggcggagccagaaattttatagagtctggacaaaaaatttattgcagaacgttacttctttcctgcgaataatttcacatttcct 43003160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 2521948 - 2522056
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| ||| |||    
T  2521948 ggaacctaaatccttgataaaatctacaggaaatgtgtttcctgcggactttacacaaaaatccgcaggtaaatcc-caggaaaagctaaaagttcaagt 2522046  T
Q  302 aatggttggg 311  Q
    ||||| ||||    
T  2522047 aatggctggg 2522056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 92 - 326
Target Start/End: Original strand, 11826934 - 11827155
Alignment:
Q  92 aacaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatata 191  Q
    ||||| |||| ||||||||||||||||||| || ||||||||| |||| | |||| |||||||| ||||||||||||| |||||||||||||||||   |    
T  11826934 aacagtggcgaagccagaaattttatagagcctaggcaaaaaaattatcgtaaaatgttacttccttcctgcgaataatttcacatttcctacgga---a 11827030  T
Q  192 tctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaa 291  Q
    |||     || | |    |||||| |||||||||| |||||||||| |||| |||| |||||||| ||| ||| ||| |||||||||||| |||||||||    
T  11827031 tct-----gcagga----aatcctaggcaaaatctacaggaaatgtatttc-tgcgaaatttacataaaaatctgcaagtaaatccgcagaaaaagctaa 11827120  T
Q  292 aatttctagtaatggttgggtttgctacaaagaaa 326  Q
    || |||||||||||| | |  || |||||||||||    
T  11827121 aagttctagtaatggctagacttactacaaagaaa 11827155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 52373978 - 52373887
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  52373978 ggcggagccaggaattttatagagtctgtgcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcggata 52373887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 31929048 - 31929174
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||  || |||||||  |||||||||||||||||| |    |||||||    
T  31929048 ggaacctaaatccttggcaaaatttgcaggaaatgtgtttcttgcagaatttacaataaaatccgcaaataaatccgcaggaaaagcgagggattctagt 31929147  T
Q  302 aatggttgggtttgctacaaagaaagt 328  Q
    |||| ||||| ||||||||||||||||    
T  31929148 aatgattgggcttgctacaaagaaagt 31929174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 326
Target Start/End: Complemental strand, 9694288 - 9694074
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    |||||||||||||||||| ||||| |||||||||||| |||| |||||| |||| ||| ||| ||||||||| || ||||||||| |||| ||           
T  9694288 ggcggagccagaaatttt-tagagcctgggcaaaaaa-ttatcgcaaaatgttatttccttcttgcgaataatttgacatttcctgcgga-at------- 9694199  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
    |||| |     ||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||  ||||||||||| ||||| ||||| |||    
T  9694198 ctgcag----gaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaattccgcaaataaatccgcagaaaaagttaaaagttc 9694103  T
Q  298 tagtaatggttgggtttgctacaaagaaa 326  Q
    ||||||||| || | || |||||||||||    
T  9694102 tagtaatggctgagcttactacaaagaaa 9694074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 32006113 - 32006023
Alignment:
Q  92 aacaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||| ||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||    
T  32006113 aacagtggcggagtcatgaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcct 32006023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 2521792 - 2521881
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    ||||||||| |||||||||||   |||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  2521792 cggagccaggaattttatagaacatgggcaaaaaatttatcgtaaaacgttacttccttcctgcgaataatttcacatttcctgcggata 2521881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 36947617 - 36947532
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaag 287  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||| |||| |||||    
T  36947617 ggaacctaaattcttggcaaaatccgcaggaaatatgtttcctgcagaatttatacaaaaatccgcaggtaaatcagcagaaaaag 36947532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 45887025 - 45887113
Alignment:
Q  4 atggtatgtagaccgaagagatcaaaacctaa-taaaaaat-ctaccgtaaaaattacagaccgaaacaatcataaactgccctctcgt 90  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||||| |||| |||||||||||    
T  45887025 atggtatgtagacggaagagatcaaaacctaaataaaaaatactaccttaaaaaatacagaccgaaacaatcctaaaatgccctctcgt 45887113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 8901897 - 8901834
Alignment:
Q  207 ctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  8901897 ctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggagtttacacaaaaatctgcagg 8901834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 49745138 - 49745080
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaa 260  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  49745138 ggaacctaaatccttggcaaaatctgcagaaaatgtgtttcctacggaatttacacaaa 49745080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 25237812 - 25237699
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    |||||||| || |||| |||||||  ||||||||   |||||  |||||||||||||| ||||||||||||| |||||||||||| |||||| |||||||    
T  25237812 ggcggagctaggaattatatagagcatgggcaaattttttatcacaaaacgttacttccttcctgcgaataatttcacatttcctgcggatacatctttc 25237713  T
Q  198 ctgcggaacctaaa 211  Q
    ||||| | ||||||    
T  25237712 ctgcgaatcctaaa 25237699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 4728787 - 4728717
Alignment:
Q  93 acaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgc 163  Q
    |||| |||||||| || |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  4728787 acagtggcggagctaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgc 4728717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 32006028 - 32005978
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaac 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32006028 tttcctgcaaataaattcacatttcctacggatatatctttcctgcggaac 32005978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 1585750 - 1585689
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaag 333  Q
    ||||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  1585750 aaatctgcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttgaag 1585689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 40969446 - 40969377
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataa 169  Q
    ||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||| || ||||||||||    
T  40969446 cggagccagcaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataa 40969377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 15034545 - 15034609
Alignment:
Q  269 ggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaag 333  Q
    |||||||| ||||||||||| |||| ||||||||||||||||| ||| |||||||||||||||||    
T  15034545 ggtaaatctgcaggaaaagcgaaaagttctagtaatggttgggcttgttacaaagaaagttgaag 15034609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 50100075 - 50100003
Alignment:
Q  117 tagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    |||||| |||| ||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||| ||||||    
T  50100075 tagagtttgggtaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcggata 50100003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 2017329 - 2017392
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcct 161  Q
    ||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||| |||||    
T  2017329 ggcggagccaggaattttataaagcctgggcaaaaaatttatcgcaaaacgttacttccttcct 2017392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 32005955 - 32005897
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||||    
T  32005955 aaatccgcaggaaaagctaaaaattctaataatggtagggcttgctacaaagaaagttg 32005897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 32828367 - 32828278
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacgga 187  Q
    |||||||||||||||||||||| | |||||||||||| ||||  |||||  ||||||| ||||||| ||||| || ||||||||| ||||    
T  32828367 ggcggagccagaaattttatagggcctgggcaaaaaaattatcacaaaatattacttccttcctgcaaataattttacatttcctgcgga 32828278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 2576396 - 2576329
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcga 165  Q
    ||||||||||  ||||||||| ||||||||||||||| |||| ||||||||||||||| || ||||||    
T  2576396 ggcggagccaagaattttataaagtctgggcaaaaaaattatcgcaaaacgttacttcctttctgcga 2576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 50099939 - 50099872
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcag 269  Q
    ||||||||||||||| ||||||| ||||| |||||  |||||| ||||||||||||||| ||||||||    
T  50099939 ggaacctaaatccttagcaaaatttgcagaaaatgaatttcctacggaatttacacaaaaatccgcag 50099872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 41955324 - 41955199
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||||||| ||||| | ||||||  |||||||||| |||||||||| || || |  || ||||||||||  |||||| |||| ||||| |    
T  41955324 ggaacctaaatccttggcgaaatccgtaggaaacatgtttcctgctgaatttacaccaaaattctgagataaatccgcaaaaaaagcaaaaagttctaat 41955225  T
Q  302 aatggttgggtttgctacaaagaaagt 328  Q
     |||  |||| ||||||||||||||||    
T  41955224 -atgactgggcttgctacaaagaaagt 41955199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 10715880 - 10715823
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    |||||||||||  ||||||||||| ||||||||||||||||| ||||||| |||||||    
T  10715880 ggcggagccaggtattttatagagcctgggcaaaaaatttatcgcaaaacattacttc 10715823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 10929650 - 10929593
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    |||||||||||  ||||||||||| ||||||||||||||||| ||||||| |||||||    
T  10929650 ggcggagccaggtattttatagagcctgggcaaaaaatttatcgcaaaacattacttc 10929593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 32828250 - 32828202
Alignment:
Q  278 gcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    |||||||||||||||| ||||||||||||||||| || |||||||||||    
T  32828250 gcaggaaaagctaaaagttctagtaatggttgggattactacaaagaaa 32828202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 52373837 - 52373770
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcag 269  Q
    ||||||||||||| || ||||||||||| |||||  |||| |||||||||||||||||| ||| ||||    
T  52373837 ggaacctaaatccctgacaaaatctgcaagaaatacgttttctgcggaatttacacaaaaatctgcag 52373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 42739869 - 42739951
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaa 284  Q
    ||||||||||||||||||| ||||||||||||| |   || ||||||||||  ||| || |||||||||||| ||| ||||||    
T  42739869 ggaacctaaatccttggcataatctgcaggaaacggactttctgcggaattatcaccaaaatccgcaggtaattccccaggaa 42739951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 6017157 - 6017085
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    |||||||||| |||||| | || |||||||||| || ||| |||||||||||||||| ||||| ||| |||||    
T  6017157 aaatccgcagaaaaagcgacaagttctagtaatagtcgggcttgctacaaagaaagtagaagttgagcctggg 6017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 49745263 - 49745199
Alignment:
Q  115 tatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacattt 179  Q
    ||||||||||||| ||||||||||| | |||| ||||| || ||||||||||||| || ||||||    
T  49745263 tatagagtctggggaaaaaatttatcgtaaaatgttacgtccttcctgcgaataattttacattt 49745199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 133
Target Start/End: Complemental strand, 6017340 - 6017306
Alignment:
Q  99 gcggagccagaaattttatagagtctgggcaaaaa 133  Q
    ||||||||||||||||||||||| |||||||||||    
T  6017340 gcggagccagaaattttatagagcctgggcaaaaa 6017306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 50099881 - 50099823
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||| |||||||||||  ||||||||||||||   || |||||||||||||||    
T  50099881 aaatccgcagaaaaagctaaaagctctagtaatggttgaacttactacaaagaaagttg 50099823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 6255480 - 6255439
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttat 139  Q
    |||||||||||||||| |||||||| ||||| ||||||||||    
T  6255480 ggcggagccagaaattatatagagtttgggcgaaaaatttat 6255439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 37236116 - 37236168
Alignment:
Q  93 acaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaa 145  Q
    |||| ||||||||||||||||  |||||| |||||| |||||||||| |||||    
T  37236116 acagtggcggagccagaaattacatagagcctgggcgaaaaatttatcgcaaa 37236168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 5e-78; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 102 - 330
Target Start/End: Original strand, 1780939 - 1781155
Alignment:
Q  102 gagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcctgc 201  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  |||    
T  1780939 gagccaggaattttatagagtctgggcataaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatcttttatgc 1781038  T
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||            |||||| |||||||||||||||||| ||||    
T  1781039 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgaggaatttacacaa------------aaatccacaggaaaagctaaaatttatagt 1781126  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||||||||||||||||||||||    
T  1781127 aatggttgggtttgctacaaagaaagttg 1781155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 101 - 344
Target Start/End: Complemental strand, 9696276 - 9696012
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct------------------ 182  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||                      
T  9696276 ggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataatttcacattt 9696177  T
Q  183 ---acggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgc 279  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  9696176 cctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatatgtttcctgcggaatttacacaaaaatctgcaggtaaatccgc 9696077  T
Q  280 aggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||||| |||||| ||||| ||||| ||||| |||||||||||||||||| || |||| |||||    
T  9696076 aggaaaatctaaaaattctaataatgattgggcttgctacaaagaaagttggagccgagcctggg 9696012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 156 - 330
Target Start/End: Complemental strand, 15529091 - 15528917
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  15529091 tttcctgcagataaattcacatttcctacagatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttac 15528992  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||||    
T  15528991 acaaacatccgcaggtaaatccgcaggaaaagctaaaaattctaataatggtagggcttgctacaaagaaagttg 15528917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 98 - 330
Target Start/End: Original strand, 10397701 - 10397925
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggat-atatc--- 193  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| || ||| || ||       
T  10397701 ggcggaaccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttccaacagataatttcaca 10397800  T
Q  194 tttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaa 293  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||             |||||||||||||||||||||    
T  10397801 tttcctacggaacctaaatccttggcaaaatatgcaggaaatgtgtttcctgcggaatttacacaa------------caatccgcaggaaaagctaaaa 10397888  T
Q  294 tttctagtaatggttgggtttgctacaaagaaagttg 330  Q
     |||| |||||||||||||||||||||||||||||||    
T  10397889 attctcgtaatggttgggtttgctacaaagaaagttg 10397925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 156 - 333
Target Start/End: Original strand, 9046886 - 9047063
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||| |||||||||||||| ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  9046886 tttcctgcagataatttcacatttcctacagatatatatttcttgcggaacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaatctac 9046985  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaag 333  Q
    ||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||  || ||||||||||||||||||    
T  9046986 acaaaaatctacaggtaaatccgcaggaaaagctaaaaattctagtaatggttggacttactacaaagaaagttgaag 9047063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 174 - 326
Target Start/End: Complemental strand, 15122170 - 15122018
Alignment:
Q  174 acatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaa 273  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||||||||    
T  15122170 acatttcctacggatatatctttcctgcggaacgtaaatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttagacacaaatccgcaggtaa 15122071  T
Q  274 atccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    |||||||| ||||||||||| ||||| ||||| | |||||| |||||||||||    
T  15122070 atccgcagaaaaagctaaaaattctaataatgatagggttttctacaaagaaa 15122018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 156 - 293
Target Start/End: Complemental strand, 2941367 - 2941230
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2941367 tttcctgcagataatttcacatttcctacggatatatctttcatgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcgaaatttac 2941268  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaa 293  Q
    || || |||||||||||||||||||||||||| |||||    
T  2941267 actaaaatccgcaggtaaatccgcaggaaaagataaaa 2941230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 156 - 344
Target Start/End: Original strand, 34248984 - 34249160
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||| |||| |||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  34248984 tttcctgcagataatttcatattttctacggatatatctttcctgtggaacctaaacccttggcaaaatctgcaggaaatgtgtttcctgcagaatttac 34249083  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||            |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||| |||||    
T  34249084 acaa------------aaatccgcaggaaaagctaaaaattctagtaatggttgggcttgctacaaagaaagttggagttgagtctggg 34249160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 2836217 - 2836345
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || |||||||| | ||||||||| ||||||||||| ||||||     
T  2836217 ggaacctaaatccttgacaaaatctgcaggaaatgtatttcctgcggaatttacacgaaaatccgcagatcaatccgcagaaaaagctaaaagttctagg 2836316  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||||||||||||||||||||||    
T  2836317 aatggttgggtttgctacaaagaaagttg 2836345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 156 - 344
Target Start/End: Original strand, 23663730 - 23663906
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||| ||||||||| ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23663730 tttcctgcagataatttcacattttctacggatatatctttcttacggaacataaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 23663829  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||            |||||||||||||||||||||| || ||| |||||||||| |||||||||||||||||| || |||| |||||    
T  23663830 acaa------------aaatccgcaggaaaagctaaaaattatagcaatggttgggcttgctacaaagaaagttggagccgagcctggg 23663906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 2960896 - 2960805
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    |||||||||||||||||||||||| ||| || ||||| ||||||||||| |||||||| ||| ||||||||| |||||||||||| ||||||    
T  2960896 ggcggagccagaaattttatagagcctgagcgaaaaaattattgcaaaatgttacttccttcttgcgaataatttcacatttcctgcggata 2960805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 202 - 329
Target Start/End: Complemental strand, 339434 - 339319
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||            |||||| ||||||||||||||| || ||||    
T  339434 ggaacctaaatccttggtaaaatctgcaggaaatgtatttcctacggaatttacacaa------------aaatccacaggaaaagctaaaagttttagt 339347  T
Q  302 aatggttgggtttgctacaaagaaagtt 329  Q
    ||||| || |||||||||||||||||||    
T  339346 aatggctgagtttgctacaaagaaagtt 339319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 2836066 - 2836143
Alignment:
Q  105 ccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    |||| |||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||||| ||||||||||||    
T  2836066 ccaggaattttatagagtctgagcaaaaaatttattacaagacgttacttccttcctgcgaataatttcacatttcct 2836143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 31188206 - 31188295
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    ||||||||  |||||||||||| |||||||||||| |||| ||||||||||||||| |||||| |||||| ||||||||| |||||||||    
T  31188206 cggagccatgaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgtgaataatttcacattttctacggata 31188295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 23663651 - 23663735
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    |||| |||||| |||||||||||| ||||  ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  23663651 ggcgcagccaggaattttatagagcctggataaaaaatttatcgcaaaacgttacttcattcctgcgaataatttcacatttcct 23663735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 34248917 - 34248989
Alignment:
Q  110 aattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||| |||| ||||||||||||    
T  34248917 aattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcggataatttcacatttcct 34248989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 256
Target Start/End: Original strand, 14938816 - 14938981
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggat-atatc---tt 195  Q
    ||||| ||||||||||||||||  ||||||||||| |||| |||||| |||||||  |||||| |||||| |||||||||||| | ||| || ||   ||    
T  14938816 cggagtcagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttactttcttcctgggaataatttcacatttcctgcagataatttcacatt 14938915  T
Q  196 tcctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttaca 256  Q
    |||| | ||| ||     |||||||  |||||||||||||||||||||||||||||||||||||||    
T  14938916 tcctacagaatctgcaggaaatcctaagcaaaatctgcaggaaatgtgtttcctgcggaatttaca 14938981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 34188856 - 34188773
Alignment:
Q  247 ggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    |||||||| |||||||| || |||||||||||||||||||| | ||| |||||||||||| |||| ||||||||||||||||||    
T  34188856 ggaatttatacaaacattcgtaggtaaatccgcaggaaaagttgaaagttctagtaatggctgggcttgctacaaagaaagttg 34188773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 339562 - 339472
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggat 188  Q
    |||||||| |||||||||||||||  |||||||||||||||| |||||| |||||||| ||||||| | ||| |||||||||||| |||||    
T  339562 ggcggagctagaaattttatagagcttgggcaaaaaatttatcgcaaaatgttacttccttcctgcaattaatttcacatttcctgcggat 339472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 15122272 - 15122186
Alignment:
Q  93 acaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacattt 179  Q
    |||| ||||||| ||| ||||||||||||| |||||||||||||||| ||||||||||||||  || |||||||||| |||||||||    
T  15122272 acagtggcggagtcaggaattttatagagtttgggcaaaaaatttatcgcaaaacgttactttctttctgcgaataatttcacattt 15122186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 34189022 - 34188931
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    ||||||||||| |||||| ||||| ||| ||||||||||| | |||||||||||| ||| || ||||||||| |||||||||||| ||||||    
T  34189022 ggcggagccaggaattttctagagcctgagcaaaaaatttgtcgcaaaacgttacctctctcttgcgaataatttcacatttcctgcggata 34188931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 28614299 - 28614377
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacattt 179  Q
    |||| |||||||||||||||| ||| |||||||| |||| |||||| |||||||| ||||||||||||| |||||||||    
T  28614299 ggaggcagaaattttatagagcctgtgcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattt 28614377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 28614434 - 28614510
Alignment:
Q  248 gaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaaga 324  Q
    ||||||||| ||| ||||||||||||||||| |||||||| ||||| |||||||||||| | || ||||||||||||    
T  28614434 gaatttacataaaaatccgcaggtaaatccgtaggaaaagttaaaagttctagtaatggctaggcttgctacaaaga 28614510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 2941443 - 2941389
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||||||||    
T  2941443 ggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttc 2941389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 9046806 - 9046860
Alignment:
Q  97 gggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgtta 151  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  9046806 gggcggagccagaaattttatagagtttgggcaaaaaatttatcggaaaacgtta 9046860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 31200050 - 31200140
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgc-aaaacgttacttctttcctgcgaataaattcacatttcctacggata 189  Q
    ||||||||  ||||||||||||  ||||||||||| |||| || ||||||||||||| ||||||||||||| ||||||||| | |||||||    
T  31200050 cggagccatgaattttatagagcatgggcaaaaaaattatcgctaaaacgttacttccttcctgcgaataatttcacattttccacggata 31200140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 15529170 - 15529107
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcct 161  Q
    ||||||| ||| |||||||||||| || |||||||||||||| ||||||| |||||||||||||    
T  15529170 ggcggagtcaggaattttatagagcctaggcaaaaaatttatcgcaaaacattacttctttcct 15529107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 326
Target Start/End: Complemental strand, 2960724 - 2960671
Alignment:
Q  273 aatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||||||||||||||||||| |||||||| ||| |||  ||||||||||||||    
T  2960724 aatccgcaggaaaagctaaaagttctagtattggctggacttgctacaaagaaa 2960671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 26218301 - 26218348
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaa 145  Q
    |||||||||||||||| ||||||| ||| || ||||||||||||||||    
T  26218301 ggcggagccagaaattatatagagcctgagcgaaaaatttattgcaaa 26218348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 2960776 - 2960715
Alignment:
Q  209 aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    ||||||| ||||||||  ||||||||||||||| ||||| |||||||| ||  |||||||||    
T  2960776 aaatcctgggcaaaattagcaggaaatgtgttttctgcgaaatttacataataatccgcagg 2960715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 5582516 - 5582444
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||||||||||||||| | |  |||||||||| | || | |||||||||||||||| ||||| ||| |||||    
T  5582516 aaatccgcaggaaaagcgagaggttctagtaatagctgtgcttgctacaaagaaagtagaagttgagcctggg 5582444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 7e-71; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 98 - 344
Target Start/End: Original strand, 36406381 - 36406648
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattca---------------------ca 176  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||                     ||    
T  36406381 ggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcttgcagataatttcaca 36406480  T
Q  177 tttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatc 276  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  36406481 tttcctacggatatatctttcctgcggaacctcaatccttggcaaaatctgcaggaaatgtgtttcctacggaatttacacaaatatccgcaggtaaatc 36406580  T
Q  277 cgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    | ||||||||||||||| || |||||||| ||||| |||||||||||||||||| || |||| |||||    
T  36406581 cacaggaaaagctaaaaattatagtaatgtttgggcttgctacaaagaaagttggagccgagcctggg 36406648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 102 - 344
Target Start/End: Complemental strand, 24965231 - 24965001
Alignment:
Q  102 gagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcctgc 201  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||  || |||||||||| |||||||||||| |  |||||||||||||||    
T  24965231 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaaccttactttctttctgcgaataatttcacatttcctgcaaatatatctttcctgc 24965132  T
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||| |||||||    
T  24965131 ggaacctaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------------aaatccgcaggaaaagctaaaaattctagt 24965044  T
Q  302 aatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    |||||||||| |||||||||||||||||| || |||| |||||    
T  24965043 aatggttgggcttgctacaaagaaagttggagccgagcctggg 24965001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 156 - 330
Target Start/End: Original strand, 3383990 - 3384164
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||   |||  ||| ||||||||    
T  3383990 tttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctacatgaaatacattttttgcagaatttac 3384089  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||| ||||||| ||  ||||||||||||||||||    
T  3384090 acaaaaatccgcaggtaaatccgcagaaaaagctaaaaattctaataatggtaggacttgctacaaagaaagttg 3384164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 166 - 344
Target Start/End: Complemental strand, 28928194 - 28928027
Alignment:
Q  166 ataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgca-ggaaatgtgtttcctgcggaatttacacaaacatc 264  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||         
T  28928194 ataatttcacatttcctacagatatatctttcctgcggaacctaaatccttggcaaaatctgcagggaaatgtgtttcctgcggaatttacacaa----- 28928100  T
Q  265 cgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
           || ||||||||||||||||||| |||||||||||||| || |||||||||||||||||| || |||| |||||    
T  28928099 -------aactccgcaggaaaagctaaaaattctagtaatggttaggcttgctacaaagaaagttggagccgagcctggg 28928027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 202 - 330
Target Start/End: Complemental strand, 13243192 - 13243064
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||| ||||| |    
T  13243192 ggaacctaaatccttggcaaaatctacaggaaatgtgtttcctgcggaatttacacaaaactccgcagataaatctgcaggaaaagctaaaagttctaat 13243093  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    ||||| |||| |||||||||| |||||||    
T  13243092 aatggctgggcttgctacaaaaaaagttg 13243064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 39431679 - 39431807
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||||| |||||||||||| ||| |||    
T  39431679 ggaacctaaatctttggcaaaatctgcacgaaatgtgtttcctacggaatttacacaaaactccgcaggtaaatccgcaagaaaagctaaaagttcaagt 39431778  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    ||| |  ||||||||||||||||||||||    
T  39431779 aattgaagggtttgctacaaagaaagttg 39431807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 102 - 270
Target Start/End: Original strand, 27321758 - 27321935
Alignment:
Q  102 gagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggat-atatc---tttc 197  Q
    |||||||||||||||||||| |||||||||||| |||| |||||| |||||||| ||||||||||||| ||||||||| || | ||| || ||   | ||    
T  27321758 gagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgcagataatttcacatatc 27321857  T
Q  198 ctgcggaacct-----aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    |||| ||| ||     |||| || |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||    
T  27321858 ctgcagaatctgcaggaaattctaggcaaaatttgcaggaaatgtgtttcctgcggaatttacataaaaatccgcagg 27321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 38214949 - 38214860
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacgga 187  Q
    ||||||||||||||||||||||||  ||||||||||| |||| |||||| |||||||| ||||||||||||| |||||||||||| ||||    
T  38214949 ggcggagccagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttacttcattcctgcgaataatttcacatttcctgcgga 38214860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 34282759 - 34282836
Alignment:
Q  105 ccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||||||||||||||| |||| |||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||    
T  34282759 ccagaaattttatagagcctggacaaaaaatttatcgcacaacgttacttccttcctgcgaataatttcacatttcct 34282836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 330
Target Start/End: Original strand, 34282913 - 34283030
Alignment:
Q  201 cggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctag 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |            ||||||||| |||||||||||| ||||||    
T  34282913 cggaacttaaatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacacta------------aaatccgcaagaaaagctaaaagttctag 34283000  T
Q  301 taatggttgggtttgctacaaagaaagttg 330  Q
    |||||  |||  ||||||||||||||||||    
T  34283001 taatgactggacttgctacaaagaaagttg 34283030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 35384257 - 35384341
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||||||||| ||||||||||||  |||||||||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||    
T  35384257 ggcggagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacggtacttccttcctacgaataatttcacatttcct 35384341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 8968435 - 8968309
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||||||||||||| |||||      |||||||||||||||||||| || |||||||||||||||||||| |||||  | |  |||||||    
T  8968435 ggaacctaaatccttggcaaaatccgcaggc-----gtttcctgcggaatttacaccaatatccgcaggtaaatccgcagaaaaagtgataggttctagt 8968341  T
Q  302 aatggttgggtttgctacaaagaaagttgaag 333  Q
    ||||| |||  ||||||||||| |||| ||||    
T  8968340 aatggctggacttgctacaaaggaagtagaag 8968309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 31500854 - 31500950
Alignment:
Q  208 taaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatgg 306  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||||| ||  ||||||| |||||||| ||| ||||||||||| || |||||||||    
T  31500854 taaatccttggcaaaatccgtaggaaatgtgtttcctgcagaatttacataa--atccgcaagtaaatcctcagaaaaagctaaaaattttagtaatgg 31500950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 31500707 - 31500818
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    |||||||||||||||||||  |||||||   ||||||||||||||||||  ||||||| ||| | ||||||| || |||||||||||| |||||||||||    
T  31500707 ggcggagccagaaatttta--gagtctgaataaaaaatttattgcaaaatattacttccttcatacgaataattttacatttcctacgtatatatctttc 31500804  T
Q  198 ctgcggaacctaaa 211  Q
    |  |||| ||||||    
T  31500805 caacggatcctaaa 31500818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 28928289 - 28928212
Alignment:
Q  92 aacaggggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataa 169  Q
    ||||| ||||||||||| ||||||| |||||||||| ||||||||||| | |||| |||||||| |||||||||||||    
T  28928289 aacagtggcggagccaggaattttaaagagtctgggtaaaaaatttatcgtaaaaagttacttccttcctgcgaataa 28928212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 13243342 - 13243273
Alignment:
Q  110 aattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacattt 179  Q
    |||||||||||| ||| ||||||||||||| | |||||||||||| |||| ||| ||||| |||||||||    
T  13243342 aattttatagagcctgagcaaaaaatttatcgtaaaacgttacttttttcttgccaataatttcacattt 13243273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 333
Target Start/End: Original strand, 21138075 - 21138194
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||||||||||||  |||||||| ||||||| |||| |||||||||      ||      ||||||||||||||||| | |  |||||||    
T  21138075 ggaacctaaatccttggcaaaattcgcaggaaacgtgtttcatgcgaaatttacac------cc------aaatccgcaggaaaagcaagaggttctagt 21138162  T
Q  302 aatggttgggtttgctacaaagaaagttgaag 333  Q
    ||||||| || |||||||||||||||| ||||    
T  21138163 aatggttaggcttgctacaaagaaagtagaag 21138194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 27321925 - 27321979
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    ||||||||||||||| |||||| || ||||||||| |||| ||||||||||||||    
T  27321925 aaatccgcaggaaaaactaaaagttttagtaatggctgggcttgctacaaagaaa 27321979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 38214799 - 38214745
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaa 326  Q
    |||||||||||||||||||||| |||||||| ||| |||  ||||||||||||||    
T  38214799 aaatccgcaggaaaagctaaaagttctagtattggctggacttgctacaaagaaa 38214745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 3383911 - 3383968
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    |||||||||||||||||||||||   || ||||||| ||||| |||||||||||||||    
T  3383911 ggcggagccagaaattttatagaacatgagcaaaaattttatcgcaaaacgttacttc 3383968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 38214850 - 38214789
Alignment:
Q  209 aaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    ||||||| | |||||||||||||||||||||||  ||| ||||||||| ||| |||||||||    
T  38214850 aaatcctagacaaaatctgcaggaaatgtgttttatgcagaatttacataaaaatccgcagg 38214789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 26945771 - 26945689
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaa 284  Q
    ||||||||||||||||| ||| || | ||||||   |||||||| ||||||| ||| || |||||||| ||| ||||||||||    
T  26945771 ggaacctaaatccttggtaaattccgtaggaaacaggtttcctgtggaattttcaccaatatccgcagataattccgcaggaa 26945689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 24674618 - 24674667
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaat 251  Q
    ||||||| |||||||||||||||| |||||||||  |||||| |||||||    
T  24674618 ggaacctcaatccttggcaaaatccgcaggaaatcggtttccagcggaat 24674667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 42232104 - 42232063
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttat 139  Q
    |||||||||||| | ||||| |||||||||||||||||||||    
T  42232104 ggcggagccagataatttatggagtctgggcaaaaaatttat 42232063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 98 - 330
Target Start/End: Original strand, 22572613 - 22572833
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||||||| ||||||||| || |||| |||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||| | |||||||||||    
T  22572613 ggcggagccaggaattttataaagcctggacaaaaaatttatcgcaaaacgttactttcttcctgcgaataatttcacatttcctatgaatatatctttc 22572712  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||            |||| ||||||||||||||||  |||    
T  22572713 ttgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctggggaatttacacaa------------aaattcgcaggaaaagctaaatattc 22572800  T
Q  298 tagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||||||||| || ||||||||||||||||||    
T  22572801 tagtaatggttaggcttgctacaaagaaagttg 22572833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 156 - 344
Target Start/End: Original strand, 6799856 - 6800032
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6799856 tttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 6799955  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||||            |||||||||||||||| ||||| ||||||||||||||| | |||||||||||||||||| || |||| |||||    
T  6799956 acaa------------aaatccgcaggaaaagttaaaaattctagtaatggttgagcttgctacaaagaaagttggagccgagcctggg 6800032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 166 - 330
Target Start/End: Complemental strand, 13203902 - 13203750
Alignment:
Q  166 ataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatcc 265  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||          
T  13203902 ataatttcacatttcctacggatatctctttcctgcggaacctaaatccttggcaaaatctgcaggaaacgtgtttcctgcggaatttacacaa------ 13203809  T
Q  266 gcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
          |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  13203808 ------aaatccgcaggaaaagctaaaaattctagtaatggttgggcttgctacaaagaaagttg 13203750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 202 - 362
Target Start/End: Complemental strand, 25563034 - 25562869
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||  |||||||| ||||||||||||||||||||||| |||||||    
T  25563034 ggaacctaaatccttggcaaaatctgcaggaaatgtatttcctgcggaatttacaaaacaatccgcagataaatccgcaggaaaagctaaaagttctagt 25562935  T
Q  302 aatggttgggtttgctacaaagaaagttgaagtcga-----ggctgggtggtggctccgcccctgc 362  Q
    |||||||||| |||||||||||||||||| ||  ||     ||||||| |||||||||||||||||    
T  25562934 aatggttgggcttgctacaaagaaagttggagctgagcctgggctggggggtggctccgcccctgc 25562869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 156 - 344
Target Start/End: Original strand, 41114840 - 41115016
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41114840 tttcctgcagataatttcacatttcctacggatatatctttcttgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 41114939  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaagtcgaggctggg 344  Q
    ||            | ||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||| || |||| |||||    
T  41114940 ac------------gaaaatccgcaggaaaaactaaaaattctagtaatggttgagcttgctacaaagaaagttggagccgagcctggg 41115016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 156 - 330
Target Start/End: Original strand, 18299113 - 18299275
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18299113 tttcctgcagataatttcacatttcctacagatatatctttcttgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 18299212  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||            ||||||||| |||||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  18299213 acaa------------aaatccgcaagaaaagttaaaaattctagtaatggttgggcttgctacaaagaaagttg 18299275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 110 - 330
Target Start/End: Complemental strand, 2476018 - 2475805
Alignment:
Q  110 aattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcctgcggaaccta 209  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  2476018 aattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcgaatatatctttcctgcggaaccta 2475919  T
Q  210 aatccttggcaaaatctgcaggaaatgtgtttc-----ctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaat 304  Q
     ||| ||||||||||||||| |||||| |||||      ||||||||||||||||            ||||||||| || ||||||||| ||||||||||    
T  2475918 tatcattggcaaaatctgcaagaaatgagtttcatgttgtgcggaatttacacaa------------aaatccgcaagacaagctaaaagttctagtaat 2475831  T
Q  305 ggttgggtttgctacaaagaaagttg 330  Q
    || |||| || |||||||||||||||    
T  2475830 ggctgggcttcctacaaagaaagttg 2475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 98 - 266
Target Start/End: Complemental strand, 29257590 - 29257401
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct--------------- 182  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||||                   
T  29257590 ggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcacatttcctgcagataagttcaca 29257491  T
Q  183 ------acggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccg 266  Q
          |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  29257490 tttcctacggatatatctttcctgcggaacgtaaattcttggcaaaatctgcaggaaatgtgtttcctgcgaaatttacacaaaaatccg 29257401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 17249554 - 17249441
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    ||||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||     
T  17249554 ggcggagtcaggaattttatagagtctgggcaaaatatttatagcaaaacgttactttcttcctgcgaataatttcacatttcctgcggatatatcttta 17249455  T
Q  198 ctgcggaacctaaa 211  Q
     |||||| ||||||    
T  17249454 atgcggatcctaaa 17249441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 303983 - 304067
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||  |||||||||| ||||||||||||    
T  303983 ggcggagccagaaattttatagagtttgggcaaaaaaattatcgcaaaacgttacttcttatctgcgaataatttcacatttcct 304067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 17148879 - 17148808
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaa 274  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17148879 ggaacctaaatccttg-caaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcaggtaaa 17148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 330
Target Start/End: Complemental strand, 12000619 - 12000505
Alignment:
Q  205 acctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaat 304  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||||||||||| ||||| ||||    
T  12000619 acctatatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaa-----------acatccgcaggaaaagctaaaacttctactaat 12000531  T
Q  305 ggttgggtttgctacaaagaaagttg 330  Q
    || |||  ||| ||||||||||||||    
T  12000530 ggctggacttgttacaaagaaagttg 12000505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 34756790 - 34756659
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||||||||||||||||  ||||||| ||| ||||| |||||||||||| || ||| ||||||||||||||||||||||  | |  |||||||    
T  34756790 ggaacctaaatccttggcaaaatccacaggaaacgtgattcctacggaatttacaccaaaatctgcaggtaaatccgcaggaaaagtgagaggttctagt 34756691  T
Q  302 aatggttgggtttgctacaaagaaagttgaag 333  Q
    || ||  ||  |||||||||||||||| ||||    
T  34756690 aacggccggacttgctacaaagaaagtagaag 34756659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 45444339 - 45444458
Alignment:
Q  93 acaggggcggagccagaaattttatagagtctgggcaaaa-aatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatata 191  Q
    |||| ||| ||| ||||||||| ||||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||   ||||||    
T  45444339 acagtggcagagtcagaaatttcatagagtctggacaaaaaaatttattgcaaaacattacttccttcctgcgaataatttcacatttcctgtagatata 45444438  T
Q  192 tctttcctgcggaacctaaa 211  Q
    |||||| ||| || ||||||    
T  45444439 tctttcttgcagatcctaaa 45444458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 100 - 182
Target Start/End: Complemental strand, 41010734 - 41010652
Alignment:
Q  100 cggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    |||||| || ||||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  41010734 cggagctaggaattttatagagtgtggacaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 41010652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 304141 - 304255
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||              || ||||||||||||||||||| |||||||    
T  304141 ggaacctaaatccttggcaaaatctgcaagaaatgtgtttcctgcgaaatttacac--------------aactccgcaggaaaagctaaaagttctagt 304226  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    ||||| || | ||||||||||||||||||    
T  304227 aatggctgagcttgctacaaagaaagttg 304255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 17149020 - 17148936
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    |||||||| ||||||||||| |||  ||||||||||||||||  |||||||||||||| ||||||||||||| ||||||||||||    
T  17149020 ggcggagctagaaattttattgagcttgggcaaaaaatttatctcaaaacgttacttccttcctgcgaataatttcacatttcct 17148936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 16220920 - 16221033
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||||| ||| || ||||  |||| | ||||||| ||  ||||||| |||||    
T  16220920 ggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaacgttatttcctttctgcatataattgcacattttctgtggatatacctttc 16221019  T
Q  198 ctgcggaacctaaa 211  Q
    |||| || ||||||    
T  16221020 ctgcagatcctaaa 16221033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 15651303 - 15651248
Alignment:
Q  205 acctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaa 260  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  15651303 acctaaatccttggcaaaatacgcaggaaatgtgtttcctgcggaatttacacaaa 15651248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 17249416 - 17249349
Alignment:
Q  203 gaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    |||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||| ||||    
T  17249416 gaacctaaatccttggcaaaatctacaagaaatgtgtttcctgtggaatttacacaaaaatccacagg 17249349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 41010574 - 41010507
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcag 269  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  41010574 ggaacctaaatccttagtaaaatctgcaggaaatgtgtttcctgcagaatttatacaaaaatccgcag 41010507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 33909246 - 33909322
Alignment:
Q  106 cagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||| || ||| ||| ||||| ||||||||||||    
T  33909246 cagaaattttatagagtctgggcaaaaactttatcgcaaaatgttacatccttcatgcaaataatttcacatttcct 33909322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 13203991 - 13203920
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataa 169  Q
    ||||||||||| ||||||||||||  || ||||||||||||| |||||| |||||||| |||| ||||||||    
T  13203991 ggcggagccaggaattttatagagcatgagcaaaaaatttatcgcaaaatgttacttccttccagcgaataa 13203920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 41114764 - 41114818
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    |||||||| ||||||||||||  |||||||||||||||| |||||||||||||||    
T  41114764 ggagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttc 41114818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 12000781 - 12000700
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacattt 179  Q
    ||||||||||| |||| ||||||| || ||||||||| |||| |||||| ||||| || ||||||||||||| || ||||||    
T  12000781 ggcggagccaggaattatatagagcctaggcaaaaaaattatcgcaaaatgttacgtccttcctgcgaataattttacattt 12000700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 18299049 - 18299105
Alignment:
Q  113 tttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataa 169  Q
    |||||| ||| |||||||||||||||| | ||||||||||||| |||||||||||||    
T  18299049 tttataaagtttgggcaaaaaatttatcgtaaaacgttacttccttcctgcgaataa 18299105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 304062 - 304117
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaa 211  Q
    ||||||||  |||| |||||||||||| ||||||||||||||||||||| ||||||    
T  304062 tttcctgcagataatttcacatttcctgcggatatatctttcctgcggatcctaaa 304117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 12000701 - 12000646
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaa 211  Q
    ||||| ||| |||| |||||||||||| ||||||||||||||||||||| ||||||    
T  12000701 tttccggcggataatttcacatttcctgcggatatatctttcctgcggatcctaaa 12000646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 15429276 - 15429213
Alignment:
Q  203 gaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccg 266  Q
    ||||||||||||||| |||||||  |||||||  ||||||||||||||||||||| || |||||    
T  15429276 gaacctaaatccttgacaaaatccacaggaaacatgtttcctgcggaatttacaccaaaatccg 15429213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 33909359 - 33909426
Alignment:
Q  203 gaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcagg 270  Q
    ||||||||||| |||| |||||||||||||||||| | |||||| |||||| |||||| || ||||||    
T  33909359 gaacctaaatctttggaaaaatctgcaggaaatgtttctcctgcagaattttcacaaaaattcgcagg 33909426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 4570554 - 4570615
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaag 333  Q
    ||||||||||| ||||| ||| ||||||||||||| |||| || ||||||||||||| ||||    
T  4570554 aaatccgcaggtaaagcgaaagtttctagtaatggctgggcttactacaaagaaagtagaag 4570615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 19881534 - 19881599
Alignment:
Q  220 aaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaa 285  Q
    ||||||||||||||| ||||||| |||||||||| |||  | |  |||||||||||||||||||||    
T  19881534 aaaatctgcaggaaacgtgtttcatgcggaattttcacctaaaatcgcaggtaaatccgcaggaaa 19881599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 26655690 - 26655731
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttat 139  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  26655690 ggcggagccaaaaattttatagagcctgggcaaaaaatttat 26655731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 13654790 - 13654874
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaa 286  Q
    |||||||||||||||||||||||| |||||||||   ||||||| || ||||  ||  | | ||| |||||||||||||||||||    
T  13654790 ggaacctaaatccttggcaaaatccgcaggaaatcgttttcctgtggtattttaacttaaacccgtaggtaaatccgcaggaaaa 13654874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 1955143 - 1955096
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaa 145  Q
    |||||||||||||||||| |||||| ||| |||||||||||| |||||    
T  1955143 ggcggagccagaaattttttagagtatggacaaaaaatttatcgcaaa 1955096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 34756897 - 34756834
Alignment:
Q  148 gttacttctttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaa 211  Q
    |||||||| |||||||| |||| |  ||||||||| |||||||| |||||||||||| ||||||    
T  34756897 gttacttccttcctgcggataattgtacatttcctgcggatatacctttcctgcggatcctaaa 34756834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 133
Target Start/End: Original strand, 35649538 - 35649573
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaa 133  Q
    ||||||||||||||||||||||||| ||||||||||    
T  35649538 ggcggagccagaaattttatagagtttgggcaaaaa 35649573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 42477652 - 42477605
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaa 145  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||||    
T  42477652 ggcggagccaggaattttatagagtttggacaaaaaaattattgcaaa 42477605  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 33909421 - 33909474
Alignment:
Q  277 cgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||| |||||| |||||||||||  || | ||||||||||||||||||    
T  33909421 cgcaggaaaaactaaaaattctagtaatgactgagcttgctacaaagaaagttg 33909474  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 42152602 - 42152663
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttgaag 333  Q
    ||||||||||||||||| | |  ||||| |||||| ||| ||||||||||||||||| ||||    
T  42152602 aaatccgcaggaaaagcgagaggttctaataatggctggatttgctacaaagaaagtagaag 42152663  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 9011436 - 9011468
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaa 234  Q
    |||||||||| ||||||||||||||||||||||    
T  9011436 ggaacctaaagccttggcaaaatctgcaggaaa 9011468  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 16221076 - 16221132
Alignment:
Q  272 aaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagt 328  Q
    ||||||||||||||||| | || ||||||||||||||| | ||| |||| |||||||    
T  16221076 aaatccgcaggaaaagcaagaagttctagtaatggttgtgcttgttacacagaaagt 16221132  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 25563196 - 25563112
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||||||||| ||||||||||||  |||| ||    ||||| ||||||||||||||| || |||| ||||| |||| |||||||    
T  25563196 ggcggagccaggaattttatagagcttgggaaatttttttatcgcaaaacgttacttcctttctgcaaataatttcatatttcct 25563112  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 29759855 - 29759895
Alignment:
Q  209 aaatccttggcaaaatctgcaggaaatgtgtttcctgcgga 249  Q
    ||||||||||||||||| ||||||||  |||||||||||||    
T  29759855 aaatccttggcaaaatcggcaggaaacctgtttcctgcgga 29759895  T

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Target: scaffold0638 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 98 - 326
Target Start/End: Complemental strand, 4301 - 4085
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttc 197  Q
    |||||||||| ||||||||||||| |||||||||||| |||| |||||| |||||||| ||||||||||||| |||||||||||||||||   ||||       
T  4301 ggcggagccataaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctacgga---atct--- 4208  T
Q  198 ctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttc 297  Q
      || | |    |||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| |||    
T  4207 --gcagga----aatcctgggcaaaatctgcaggaaatgtgtttcctacggaatttacataaacatccgcaggtaaattcgcaggaaaagctaaaagttc 4114  T
Q  298 tagtaatggttgggtttgctacaaagaaa 326  Q
    ||||||||| |||| ||||||||||||||    
T  4113 tagtaatggctgggcttgctacaaagaaa 4085  T

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Target: scaffold0075 (Bit Score: 94; Significance: 9e-46; HSPs: 5)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 156 - 330
Target Start/End: Complemental strand, 7055 - 6893
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  7055 tttcctgctgataaattcacatttcctacggatatatccttcctgcggaacctaaatccttggcaaaatctgcaggaaatgcatttccttcggaatttac 6956  T
Q  256 acaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    ||||             ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  6955 acaa------------taatccgcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttg 6893  T

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Target: scaffold0075; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 11668 - 11554
Alignment:
Q  156 tttcctgcgaataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttac 255  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  11668 tttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgcattttctgcggaatttac 11569  T
Q  256 acaaacatccgcagg 270  Q
    ||||  |||||||||    
T  11568 acaataatccgcagg 11554  T

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Target: scaffold0075; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 11747 - 11690
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    ||||||||||| |||||||||||  ||||||||||||||||| |||||||||||||||    
T  11747 ggcggagccaggaattttatagaacctgggcaaaaaatttatcgcaaaacgttacttc 11690  T

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Target: scaffold0075; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 11563 - 11507
Alignment:
Q  273 aatccgcaggaaaagctaaaatttctagtaatggttgggtttgctacaaagaaagttg 330  Q
    |||||||||||||||  |||||| ||||||||||| ||| ||||||||||||||||||    
T  11563 aatccgcaggaaaagaaaaaatt-ctagtaatggtagggcttgctacaaagaaagttg 11507  T

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Target: scaffold0075; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 7132 - 7077
Alignment:
Q  99 gcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttc 155  Q
    ||||||| || |||||||||||  ||||||||||||||||| || ||||||||||||    
T  7132 gcggagctaggaattttatagaacctgggcaaaaaatttatcgc-aaacgttacttc 7077  T

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Target: scaffold0618 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 98 - 266
Target Start/End: Complemental strand, 1919 - 1730
Alignment:
Q  98 ggcggagccagaaattttatagagtctgggcaaaaaatttattgcaaaacgttacttctttcctgcgaataaattcacatttcct--------------- 182  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||||                   
T  1919 ggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcacatttcctgcagataagttcaca 1820  T
Q  183 ------acggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccg 266  Q
          |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  1819 tttcctacggatatatctttcctgcggaacgtaaattcttggcaaaatctgcaggaaatgtgtttcctgcgaaatttacacaaaaatccg 1730  T

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Target: scaffold0021 (Bit Score: 73; Significance: 3e-33; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 109316 - 109444
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||| ||| ||||||||||||| | |||||||| |||||||||||||||||| || ||||||||||||| ||||||||| ||||| |||||||    
T  109316 ggaacctaaattcttagcaaaatctgcagaacatgtgttttctgcggaatttacacaaaaattcgcaggtaaatccacaggaaaagttaaaagttctagt 109415  T
Q  302 aatggttgggtttgctacaaagaaagttg 330  Q
    |||   |||| ||||||||||||||||||    
T  109416 aataactggggttgctacaaagaaagttg 109444  T

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Target: scaffold0021; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 112099 - 112210
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaa-atttattgcaaaacgttacttctttcctgcgaataaattcacatttcctacggatatatctttcct 199  Q
    |||| ||||||||| || ||| ||||||||||| |||||||||||||| ||||||| ||||||| ||||| ||||| |||| |  |||||||||||||||    
T  112099 ggagtcagaaatttcattgagcctgggcaaaaatatttattgcaaaacattacttccttcctgcaaataatttcacgtttcatgtggatatatctttcct 112198  T
Q  200 gcggaacctaaa 211  Q
    ||||| ||||||    
T  112199 gcggatcctaaa 112210  T

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Target: scaffold0021; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 112234 - 112333
Alignment:
Q  202 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaacatccgcaggtaaatccgcaggaaaagctaaaatttctagt 301  Q
    ||||||||||| ||| ||| ||||||||| ||||||||   ||| |||||||||||||| || |||||||||||||| |||||||| ||||| |||||||    
T  112234 ggaacctaaattcttagcagaatctgcagaaaatgtgt---ctgtggaatttacacaaaaattcgcaggtaaatccgtaggaaaagttaaaagttctagt 112330  T

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Target: scaffold0021; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 109198 - 109280
Alignment:
Q  101 ggagccagaaattttatagagtctgggcaaaaa-atttattgcaaaacgttacttctttcctgcgaataaattcacatttcct 182  Q
    ||||| |||||||| |||||| |||| |||||| |||||||||||||| ||||||| ||||||||||||| ||||| ||||||    
T  109198 ggagctagaaatttcatagagcctggacaaaaatatttattgcaaaacattacttccttcctgcgaataatttcacgtttcct 109280  T

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