View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14831_high_18 (Length: 226)

Name: NF14831_high_18
Description: NF14831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14831_high_18
NF14831_high_18
[»] chr3 (8 HSPs)
chr3 (1-220)||(24841900-24842119)
chr3 (160-207)||(38309292-38309338)
chr3 (170-220)||(17752094-17752143)
chr3 (170-220)||(19053414-19053463)
chr3 (172-206)||(27769736-27769770)
chr3 (173-207)||(36638869-36638903)
chr3 (173-207)||(42956145-42956179)
chr3 (172-220)||(37778207-37778254)
[»] chr1 (4 HSPs)
chr1 (172-220)||(46500965-46501013)
chr1 (172-213)||(22593372-22593412)
chr1 (170-207)||(35897582-35897619)
chr1 (172-220)||(37329377-37329424)
[»] chr5 (6 HSPs)
chr5 (170-213)||(27805996-27806038)
chr5 (170-207)||(13625483-13625520)
chr5 (172-220)||(43268601-43268648)
chr5 (175-213)||(2577396-2577434)
chr5 (172-218)||(2878642-2878687)
chr5 (172-220)||(28357215-28357262)
[»] chr8 (6 HSPs)
chr8 (172-205)||(25671855-25671888)
chr8 (172-220)||(25333666-25333713)
chr8 (173-205)||(3641306-3641338)
chr8 (170-202)||(4326175-4326207)
chr8 (172-220)||(25465812-25465859)
chr8 (172-220)||(34338348-34338395)
[»] chr7 (4 HSPs)
chr7 (173-213)||(27811426-27811465)
chr7 (173-220)||(22032836-22032882)
chr7 (173-207)||(33288041-33288075)
chr7 (173-210)||(47648620-47648657)
[»] chr2 (4 HSPs)
chr2 (173-209)||(31165114-31165150)
chr2 (172-207)||(8832543-8832578)
chr2 (173-207)||(17546510-17546544)
chr2 (174-206)||(7041452-7041484)
[»] chr4 (6 HSPs)
chr4 (172-207)||(897056-897091)
chr4 (173-207)||(42617196-42617230)
chr4 (173-213)||(8130560-8130599)
chr4 (172-220)||(8601275-8601322)
chr4 (172-220)||(18424243-18424290)
chr4 (172-220)||(29877713-29877760)
[»] chr6 (2 HSPs)
chr6 (170-207)||(4272468-4272505)
chr6 (172-220)||(8014862-8014909)


Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 24841900 - 24842119
Alignment:
Q  1 tccaaaacattaggtttttagtcccacaataactagggcctgtttgaattggcttatatgttaaatcataagttgttttcataagttcttagcttattca 100  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24841900 tccaaaacattgggtttttagtcccacaataactaggacccgtttgaattggcttatatgttaaatcataagttgttttcataagttcttaacttattca 24841999  T
Q  101 taagttggcttatttgttaattcatattcatatgttaattcacaagtctcgcataaaagcttatttttgaacttttatgttaatttataagttttcacta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24842000 taagttggcttatttgttaattcatattcatatgttaattcacaagtctcacataaaagcttatttttgaacttttatgttaatttataagtttttacta 24842099  T
Q  201 acgaaaaattgtaccttcat 220  Q
    ||||||||||||| ||||||    
T  24842100 acgaaaaattgtatcttcat 24842119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 38309338 - 38309292
Alignment:
Q  160 cttatttttgaacttttatgttaatttataagttttcactaacgaaaa 207  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||||    
T  38309338 cttatttttaagcttttatgttaatttataag-tttcactaacgaaaa 38309292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 17752094 - 17752143
Alignment:
Q  170 aacttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||||||||||||||||||||| | ||||||| ||||||||| ||||||    
T  17752094 aacttttatgttaatttataagttcttactaacg-aaaattgtatcttcat 17752143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 19053414 - 19053463
Alignment:
Q  170 aacttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||||||||||||||||||||| | ||||||| ||||||||| ||||||    
T  19053414 aacttttatgttaatttataagttcttactaacg-aaaattgtatcttcat 19053463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 27769770 - 27769736
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaa 206  Q
    |||||||||||||||||||||||||| ||||||||    
T  27769770 cttttatgttaatttataagttttcattaacgaaa 27769736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 36638869 - 36638903
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaaaa 207  Q
    ||||||||||||||||||||||||| |||||||||    
T  36638869 ttttatgttaatttataagttttcaataacgaaaa 36638903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 42956145 - 42956179
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaaaa 207  Q
    ||||||||||||||||||||| |||||||||||||    
T  42956145 ttttatgttaatttataagttctcactaacgaaaa 42956179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 37778254 - 37778207
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    ||||||| |||||||||||||| |||||||| |||||||||| ||||||    
T  37778254 cttttattttaatttataagttctcactaac-aaaaattgtatcttcat 37778207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 46500965 - 46501013
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  46500965 cttttatgttgatttataagttttcactaacggaaaattgtatcttcat 46501013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 22593372 - 22593412
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgta 213  Q
    |||||||||||||||||||||| |||||||| ||||||||||    
T  22593372 cttttatgttaatttataagttctcactaac-aaaaattgta 22593412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 35897582 - 35897619
Alignment:
Q  170 aacttttatgttaatttataagttttcactaacgaaaa 207  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  35897582 aacttttatgttaatttataaattttcactaatgaaaa 35897619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 37329377 - 37329424
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||||||||||||||||||| |||| |||| ||||||||| ||||||    
T  37329377 cttttatgttaatttataagttctcaccaacg-aaaattgtatcttcat 37329424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 27806038 - 27805996
Alignment:
Q  170 aacttttatgttaatttataagttttcactaacgaaaaattgta 213  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  27806038 aacttttatgttaatttataagttttcactaac-aaaaattgta 27805996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 13625483 - 13625520
Alignment:
Q  170 aacttttatgttaatttataagttttcactaacgaaaa 207  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  13625483 aacttttatattaatttataagttttcactaacgaaaa 13625520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 43268601 - 43268648
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  43268601 cttttatgttaatttataagttctcactaac-aaaaattgtatcttcat 43268648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 2577396 - 2577434
Alignment:
Q  175 ttatgttaatttataagttttcactaacgaaaaattgta 213  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  2577396 ttatgttaattcataagttctcactaacgaaaaattgta 2577434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 2878642 - 2878687
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttc 218  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||    
T  2878642 cttttatgttaatttaaaagttttcactaac-aaaaattgtatcttc 2878687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 28357262 - 28357215
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||||||||||||||||||||||  ||||| ||||||||| ||||||    
T  28357262 cttttatgttaatttataagttttcgttaacg-aaaattgtatcttcat 28357215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 25671855 - 25671888
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaa 205  Q
    ||||||||||||||||||||||||||||||||||    
T  25671855 cttttatgttaatttataagttttcactaacgaa 25671888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 25333666 - 25333713
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  25333666 cttttatgttaattcataagttttcactaacg-aaaattgtatcttcat 25333713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 3641338 - 3641306
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaa 205  Q
    ||||||||||||||| |||||||||||||||||    
T  3641338 ttttatgttaatttacaagttttcactaacgaa 3641306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 4326175 - 4326207
Alignment:
Q  170 aacttttatgttaatttataagttttcactaac 202  Q
    ||||||||||||||||||||| |||||||||||    
T  4326175 aacttttatgttaatttataaattttcactaac 4326207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 25465812 - 25465859
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||||||||||| ||||||||||| |||| |||||||||| ||||||    
T  25465812 cttttatgttaattcataagttttcagtaac-aaaaattgtatcttcat 25465859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 34338348 - 34338395
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    ||||||||||||| |||||||||| ||||||| ||||||||| ||||||    
T  34338348 cttttatgttaatctataagttttaactaacg-aaaattgtatcttcat 34338395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 27811465 - 27811426
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaaaaattgta 213  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  27811465 ttttatgttaatttataagttttcactaac-aaaaattgta 27811426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 22032882 - 22032836
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  22032882 ttttatcttaatttataagttctcactaacg-aaaattgtaccttcat 22032836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 33288041 - 33288075
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaaaa 207  Q
    ||||||||||||| |||||||||||||||||||||    
T  33288041 ttttatgttaattcataagttttcactaacgaaaa 33288075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 47648657 - 47648620
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaaaaatt 210  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  47648657 ttttatattaattcataagttttcactaacgaaaaatt 47648620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 31165150 - 31165114
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaaaaat 209  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31165150 ttttatgttaatttataagtttccactaacgaaaaat 31165114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Complemental strand, 8832578 - 8832543
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaa 207  Q
    |||||||||||||| |||||||||||||||||||||    
T  8832578 cttttatgttaattcataagttttcactaacgaaaa 8832543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 17546544 - 17546510
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaaaa 207  Q
    |||||||||| ||||||||||||||||||||||||    
T  17546544 ttttatgttagtttataagttttcactaacgaaaa 17546510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 7041484 - 7041452
Alignment:
Q  174 tttatgttaatttataagttttcactaacgaaa 206  Q
    |||||||||||| ||||||||||||||||||||    
T  7041484 tttatgttaattcataagttttcactaacgaaa 7041452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Complemental strand, 897091 - 897056
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaa 207  Q
    ||||||| ||||||||||||||||||||||||||||    
T  897091 cttttatattaatttataagttttcactaacgaaaa 897056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 42617196 - 42617230
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaaaa 207  Q
    |||||| ||||||||||||||||||||||||||||    
T  42617196 ttttattttaatttataagttttcactaacgaaaa 42617230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 8130599 - 8130560
Alignment:
Q  173 ttttatgttaatttataagttttcactaacgaaaaattgta 213  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  8130599 ttttatgttaattcataagttttcactaac-aaaaattgta 8130560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 8601322 - 8601275
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||| |||||||||||||| ||||||||||| |||||||||| ||||||    
T  8601322 ctttaatgttaatttataatttttcactaac-aaaaattgtatcttcat 8601275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 18424243 - 18424290
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||||||||||| ||||||||||| |||| |||||||||| ||||||    
T  18424243 cttttatgttaattcataagttttcaataac-aaaaattgtatcttcat 18424290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 29877760 - 29877713
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    |||||||||||||| ||||||| |||||||| |||||||||| ||||||    
T  29877760 cttttatgttaattcataagttctcactaac-aaaaattgtatcttcat 29877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 4272505 - 4272468
Alignment:
Q  170 aacttttatgttaatttataagttttcactaacgaaaa 207  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  4272505 aacttttatgttaaattataagttttcattaacgaaaa 4272468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 8014909 - 8014862
Alignment:
Q  172 cttttatgttaatttataagttttcactaacgaaaaattgtaccttcat 220  Q
    ||||||||||||||||| |||||||||||||  ||||||||| ||||||    
T  8014909 cttttatgttaatttatcagttttcactaac-caaaattgtatcttcat 8014862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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