View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14831_low_16 (Length: 281)

Name: NF14831_low_16
Description: NF14831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14831_low_16
NF14831_low_16
[»] scaffold0229 (1 HSPs)
scaffold0229 (80-281)||(22671-22870)
[»] chr1 (46 HSPs)
chr1 (80-281)||(1031835-1032034)
chr1 (5-79)||(27464944-27465018)
chr1 (5-79)||(31088291-31088365)
chr1 (2-79)||(19055646-19055723)
chr1 (2-79)||(21401505-21401582)
chr1 (5-78)||(26469469-26469542)
chr1 (5-78)||(50726136-50726209)
chr1 (2-78)||(3981914-3981990)
chr1 (8-79)||(45121368-45121439)
chr1 (5-79)||(649879-649953)
chr1 (2-72)||(50932411-50932481)
chr1 (1-78)||(37619650-37619727)
chr1 (1-78)||(48470745-48470822)
chr1 (5-81)||(33100918-33100994)
chr1 (3-78)||(44519039-44519114)
chr1 (5-74)||(35369810-35369879)
chr1 (5-78)||(2571745-2571819)
chr1 (5-79)||(23645521-23645595)
chr1 (5-79)||(37274920-37274994)
chr1 (5-75)||(45333821-45333891)
chr1 (13-79)||(45640419-45640485)
chr1 (5-80)||(52576187-52576263)
chr1 (5-72)||(3851268-3851335)
chr1 (5-80)||(30735179-30735254)
chr1 (5-78)||(8350087-8350159)
chr1 (5-78)||(15469945-15470017)
chr1 (5-78)||(37685439-37685512)
chr1 (5-78)||(37700006-37700079)
chr1 (2-75)||(43775313-43775386)
chr1 (2-79)||(46907302-46907379)
chr1 (2-82)||(31827058-31827138)
chr1 (1-79)||(18434901-18434979)
chr1 (5-78)||(44914459-44914533)
chr1 (9-79)||(50149060-50149130)
chr1 (2-79)||(18512230-18512307)
chr1 (1-78)||(19947632-19947709)
chr1 (13-77)||(30570642-30570706)
chr1 (12-79)||(30467420-30467487)
chr1 (11-74)||(40861154-40861217)
chr1 (1-78)||(48103250-48103328)
chr1 (2-79)||(9566847-9566924)
chr1 (2-35)||(27533415-27533448)
chr1 (42-79)||(41677223-41677260)
chr1 (9-79)||(51718517-51718583)
chr1 (82-138)||(811428-811483)
chr1 (2-78)||(26207948-26208024)
[»] chr4 (42 HSPs)
chr4 (5-81)||(26724857-26724933)
chr4 (5-79)||(26732335-26732409)
chr4 (2-78)||(53801647-53801723)
chr4 (5-79)||(51986152-51986226)
chr4 (2-79)||(27050973-27051050)
chr4 (5-78)||(46213080-46213153)
chr4 (3-78)||(15175654-15175729)
chr4 (5-79)||(23369219-23369293)
chr4 (5-79)||(44539844-44539918)
chr4 (2-79)||(29175332-29175409)
chr4 (2-79)||(37997361-37997438)
chr4 (5-80)||(36178016-36178091)
chr4 (9-75)||(10250406-10250472)
chr4 (1-75)||(24575742-24575816)
chr4 (8-78)||(38376378-38376448)
chr4 (2-79)||(38382428-38382505)
chr4 (2-79)||(39478544-39478621)
chr4 (5-78)||(43175094-43175167)
chr4 (2-79)||(47181948-47182025)
chr4 (2-79)||(48402084-48402161)
chr4 (5-79)||(31641452-31641526)
chr4 (13-79)||(37297166-37297232)
chr4 (5-78)||(39440594-39440667)
chr4 (2-79)||(56363932-56364009)
chr4 (7-75)||(11068800-11068868)
chr4 (8-79)||(2575677-2575748)
chr4 (5-80)||(5622568-5622643)
chr4 (21-80)||(27965111-27965170)
chr4 (9-79)||(26492121-26492191)
chr4 (8-82)||(50721628-50721702)
chr4 (2-79)||(34616668-34616745)
chr4 (7-70)||(38134465-38134528)
chr4 (9-72)||(45083086-45083149)
chr4 (2-79)||(42853684-42853761)
chr4 (15-78)||(5233558-5233621)
chr4 (39-78)||(53786103-53786142)
chr4 (8-78)||(7632349-7632419)
chr4 (2-75)||(19473847-19473920)
chr4 (21-78)||(26907970-26908027)
chr4 (47-79)||(2268406-2268438)
chr4 (42-78)||(46634235-46634271)
chr4 (6-82)||(50831639-50831715)
[»] chr6 (22 HSPs)
chr6 (5-82)||(32316812-32316889)
chr6 (1-79)||(34047493-34047571)
chr6 (5-78)||(552903-552976)
chr6 (2-79)||(26595456-26595533)
chr6 (2-73)||(18737460-18737531)
chr6 (9-79)||(15974722-15974792)
chr6 (5-79)||(33430249-33430323)
chr6 (2-79)||(16199557-16199634)
chr6 (5-78)||(31077904-31077977)
chr6 (8-80)||(1156833-1156905)
chr6 (2-78)||(13689882-13689958)
chr6 (3-77)||(11612296-11612370)
chr6 (5-78)||(14818042-14818115)
chr6 (2-78)||(5694039-5694115)
chr6 (2-78)||(22079451-22079527)
chr6 (2-80)||(30423438-30423516)
chr6 (2-79)||(4820474-4820551)
chr6 (43-78)||(5080467-5080502)
chr6 (1-79)||(21968781-21968857)
chr6 (8-79)||(24900887-24900958)
chr6 (2-80)||(30457612-30457690)
chr6 (2-67)||(3853206-3853271)
[»] chr3 (48 HSPs)
chr3 (5-79)||(46624017-46624091)
chr3 (5-81)||(41309227-41309303)
chr3 (5-79)||(27541389-27541463)
chr3 (5-78)||(16969454-16969527)
chr3 (5-78)||(32924169-32924242)
chr3 (5-78)||(36670902-36670975)
chr3 (5-80)||(52939761-52939836)
chr3 (5-78)||(13735840-13735913)
chr3 (5-78)||(42356972-42357045)
chr3 (1-78)||(44413283-44413360)
chr3 (5-81)||(52254023-52254099)
chr3 (1-79)||(31157564-31157642)
chr3 (1-79)||(35376968-35377046)
chr3 (5-79)||(44856063-44856137)
chr3 (2-79)||(13348021-13348098)
chr3 (2-79)||(21217619-21217696)
chr3 (5-78)||(26014922-26014995)
chr3 (2-79)||(37056944-37057021)
chr3 (2-75)||(42358529-42358602)
chr3 (5-78)||(47472439-47472512)
chr3 (2-78)||(37503635-37503711)
chr3 (2-77)||(23592565-23592640)
chr3 (2-77)||(24256660-24256735)
chr3 (2-81)||(55151602-55151681)
chr3 (16-78)||(7934095-7934157)
chr3 (8-78)||(19149103-19149173)
chr3 (9-79)||(33939352-33939422)
chr3 (5-79)||(38926738-38926812)
chr3 (5-79)||(52326129-52326203)
chr3 (2-79)||(44383296-44383373)
chr3 (5-77)||(35597272-35597344)
chr3 (5-84)||(5114188-5114267)
chr3 (8-78)||(288839-288909)
chr3 (13-75)||(7668079-7668141)
chr3 (1-75)||(8847216-8847289)
chr3 (4-77)||(23600702-23600775)
chr3 (5-79)||(37302656-37302730)
chr3 (5-74)||(5244339-5244408)
chr3 (9-77)||(28539629-28539697)
chr3 (3-79)||(44445402-44445478)
chr3 (2-50)||(45711355-45711403)
chr3 (1-79)||(25641470-25641548)
chr3 (5-79)||(44813246-44813320)
chr3 (5-52)||(20547904-20547951)
chr3 (24-79)||(42478086-42478143)
chr3 (1-78)||(42889091-42889168)
chr3 (2-79)||(51982206-51982283)
chr3 (2-74)||(11630642-11630714)
[»] chr5 (30 HSPs)
chr5 (5-78)||(28306020-28306093)
chr5 (5-81)||(14051200-14051276)
chr5 (2-78)||(15479576-15479652)
chr5 (5-79)||(18258680-18258754)
chr5 (5-78)||(7287077-7287150)
chr5 (5-78)||(33037630-33037703)
chr5 (5-80)||(5168293-5168368)
chr5 (8-79)||(26791131-26791202)
chr5 (5-79)||(1671652-1671726)
chr5 (5-79)||(36739058-36739132)
chr5 (2-79)||(8686998-8687075)
chr5 (2-78)||(41321362-41321438)
chr5 (2-79)||(17626093-17626170)
chr5 (5-77)||(1764334-1764406)
chr5 (2-80)||(3565191-3565269)
chr5 (2-79)||(7552854-7552931)
chr5 (3-79)||(22972225-22972301)
chr5 (16-79)||(35634722-35634785)
chr5 (2-79)||(1274465-1274541)
chr5 (9-70)||(7076464-7076525)
chr5 (8-77)||(13168635-13168704)
chr5 (5-78)||(14923183-14923256)
chr5 (7-79)||(28467340-28467412)
chr5 (8-79)||(39591793-39591864)
chr5 (8-79)||(39592185-39592256)
chr5 (2-75)||(2972431-2972504)
chr5 (47-80)||(1079850-1079883)
chr5 (1-78)||(18660865-18660941)
chr5 (1-29)||(1079889-1079917)
chr5 (3-75)||(13309991-13310063)
[»] chr2 (30 HSPs)
chr2 (2-79)||(2076676-2076753)
chr2 (1-79)||(22888704-22888782)
chr2 (5-79)||(43487489-43487563)
chr2 (8-79)||(18254096-18254167)
chr2 (1-75)||(6049236-6049310)
chr2 (9-79)||(9990805-9990875)
chr2 (5-77)||(9207700-9207772)
chr2 (3-79)||(32477440-32477516)
chr2 (2-81)||(41195691-41195770)
chr2 (5-79)||(1248796-1248870)
chr2 (9-79)||(9647246-9647316)
chr2 (5-79)||(42421785-42421859)
chr2 (2-79)||(37737858-37737935)
chr2 (2-77)||(41056636-41056711)
chr2 (5-79)||(9760128-9760202)
chr2 (17-79)||(21611542-21611604)
chr2 (2-79)||(25270469-25270546)
chr2 (3-79)||(3097748-3097824)
chr2 (5-79)||(9194351-9194425)
chr2 (9-78)||(3838768-3838837)
chr2 (5-78)||(7698281-7698354)
chr2 (2-79)||(13333057-13333134)
chr2 (3-80)||(27490616-27490693)
chr2 (2-79)||(41042361-41042438)
chr2 (1-79)||(8848584-8848662)
chr2 (5-78)||(19633392-19633466)
chr2 (5-78)||(19830293-19830367)
chr2 (5-77)||(34944979-34945051)
chr2 (5-75)||(42091393-42091465)
chr2 (47-79)||(22416353-22416385)
[»] chr8 (24 HSPs)
chr8 (2-77)||(36660339-36660414)
chr8 (2-81)||(11253427-11253506)
chr8 (7-78)||(42768316-42768387)
chr8 (5-78)||(22719550-22719623)
chr8 (5-82)||(32501080-32501157)
chr8 (8-79)||(12898816-12898887)
chr8 (5-80)||(34186717-34186792)
chr8 (2-80)||(24479330-24479408)
chr8 (2-80)||(29025367-29025445)
chr8 (5-79)||(37449312-37449386)
chr8 (5-72)||(36251436-36251503)
chr8 (8-79)||(43397894-43397965)
chr8 (5-79)||(27325868-27325942)
chr8 (9-79)||(37133749-37133819)
chr8 (2-79)||(13106587-13106664)
chr8 (3-75)||(36816507-36816579)
chr8 (5-72)||(5277393-5277460)
chr8 (2-77)||(32133430-32133505)
chr8 (8-78)||(7271963-7272033)
chr8 (5-78)||(4054174-4054247)
chr8 (11-79)||(10839369-10839437)
chr8 (8-78)||(23754594-23754664)
chr8 (16-80)||(10692552-10692616)
chr8 (47-79)||(31249423-31249455)
[»] chr7 (25 HSPs)
chr7 (1-79)||(3937010-3937088)
chr7 (5-78)||(38956506-38956579)
chr7 (6-79)||(43942743-43942816)
chr7 (5-79)||(25192804-25192878)
chr7 (12-78)||(41989628-41989694)
chr7 (5-82)||(24614200-24614277)
chr7 (8-80)||(43025453-43025525)
chr7 (5-78)||(44895460-44895533)
chr7 (2-79)||(46022154-46022231)
chr7 (2-81)||(41189426-41189507)
chr7 (2-79)||(7701651-7701728)
chr7 (8-81)||(35072247-35072320)
chr7 (5-77)||(32529745-32529817)
chr7 (9-80)||(3614332-3614403)
chr7 (5-78)||(22918057-22918130)
chr7 (8-81)||(31445431-31445504)
chr7 (8-81)||(35098588-35098661)
chr7 (2-78)||(40417881-40417957)
chr7 (5-80)||(40112840-40112915)
chr7 (9-78)||(45851095-45851164)
chr7 (1-78)||(46578023-46578100)
chr7 (2-79)||(48062164-48062241)
chr7 (2-76)||(32803796-32803870)
chr7 (1-75)||(42553004-42553078)
chr7 (2-78)||(43159463-43159539)
[»] scaffold0519 (1 HSPs)
scaffold0519 (2-81)||(11889-11968)
[»] scaffold0056 (1 HSPs)
scaffold0056 (5-79)||(76506-76580)
[»] scaffold0199 (1 HSPs)
scaffold0199 (5-79)||(8778-8852)
[»] scaffold0098 (1 HSPs)
scaffold0098 (5-78)||(49405-49478)


Alignment Details
Target: scaffold0229 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 80 - 281
Target Start/End: Complemental strand, 22870 - 22671
Alignment:
Q  80 attcattacatgtactttatgcttttaaggtccaaaatatcacttcatcaatttgactttcaaaagtctcctccaacttcaaaagagaagcatccaacca 179  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22870 attcattatatgtactttatgcttttaaggtcgaaaatatcacttcatcaatttgaatttcaaaagtctcctccaacttcaaaagagaagcatccaacca 22771  T
Q  180 tttctctaagtttaccttggaaaatcatttacaagtctacaaagtacacgcacgaa-------ttcaaagttatctaagtctaacatccaaattactttc 272  Q
    |||||||||||||||||||||| |||||||||         || ||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  22770 tttctctaagtttaccttggaacatcatttac---------aactacacgcacgaattcaggtttcaaagttatctaagtctaacatccaaattactttc 22680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 5e-68; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 80 - 281
Target Start/End: Complemental strand, 1032034 - 1031835
Alignment:
Q  80 attcattacatgtactttatgcttttaaggtccaaaatatcacttcatcaatttgactttcaaaagtctcctccaacttcaaaagagaagcatccaacca 179  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1032034 attcattatatgtactttatgcttttaaggtcgaaaatatcacttcatcaatttgaatttcaaaagtctcctccaacttcaaaagagaagcatccaacca 1031935  T
Q  180 tttctctaagtttaccttggaaaatcatttacaagtctacaaagtacacgcacgaa-------ttcaaagttatctaagtctaacatccaaattactttc 272  Q
    |||||||||||||||||||||| |||||||||         || ||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  1031934 tttctctaagtttaccttggaacatcatttac---------aactacacgcacgaattcaggtttcaaagttatctaagtctaacatccaaattactttc 1031844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 27465018 - 27464944
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  27465018 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 27464944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 31088291 - 31088365
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||| ||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  31088291 tacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 31088365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 19055723 - 19055646
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||| ||||||| |||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  19055723 caatatctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 19055646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 21401505 - 21401582
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||||||||||||||||||  ||||| |||||||| ||||||  |||||||||||||||||||||||||    
T  21401505 caatacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactct 21401582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 26469469 - 26469542
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  26469469 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 50726209 - 50726136
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||||||||| |||||||| ||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  50726209 tacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 3981990 - 3981914
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||| ||||||||||||||||||||||  |||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  3981990 caatatctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 45121439 - 45121368
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||| |||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  45121439 ctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 45121368  T

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Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 649879 - 649953
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| | ||||||||||||||||||||||||    
T  649879 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactct 649953  T

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Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 50932411 - 50932481
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataaca 72  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||    
T  50932411 caatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

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Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37619650 - 37619727
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||||||| |||||||||||||| ||||| | ||||||| |||||| ||||||||||||||||||| |||||    
T  37619650 ccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataacataactc 37619727  T

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Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48470745 - 48470822
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||| ||||||| ||||||||||||||  |||| ||||||||| |||||| |||||||||||||||||||||||||    
T  48470745 ccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

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Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 33100918 - 33100994
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    |||||||||| |||| ||||||||| ||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  33100918 tacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctat 33100994  T

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Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 44519114 - 44519039
Alignment:
Q  3 aatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||||| |||||||||||||| ||| | ||||||||| |||||| |||| ||||||||||||||||||||    
T  44519114 aatacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

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Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 35369810 - 35369879
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacaca 74  Q
    |||||||||| |||| ||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||    
T  35369810 tacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 35369879  T

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Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 2571745 - 2571819
Alignment:
Q  5 tacctcattttctttgt-aaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||||||||| |||||||| ||||| ||||||||| ||| ||  ||||||||||||||||||||||||    
T  2571745 tacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactc 2571819  T

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Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 23645521 - 23645595
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| ||||||||| | |||| |||| |||||||||||||| ||||||    
T  23645521 tacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataactct 23645595  T

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Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 37274994 - 37274920
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| ||||| ||||||||  |||| ||||||||| |||||| || |||||||||||||||||||||||    
T  37274994 tacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactct 37274920  T

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Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 45333821 - 45333891
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    |||||||||| ||||||||||||||  |||| |||||| ||||||||| ||| ||||||||||||||||||    
T  45333821 tacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacacaa 45333891  T

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Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 45640419 - 45640485
Alignment:
Q  13 tttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||||||| ||||  ||||||||| |||||| ||| ||||||||||||||||||||||    
T  45640419 tttctttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaactct 45640485  T

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Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 52576263 - 52576187
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatgga-tgttcaaataacacaactcta 80  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||| | |||| | |||||||||||||||||||||    
T  52576263 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaactcta 52576187  T

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Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 3851268 - 3851335
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataaca 72  Q
    |||||||||| |||| ||||||||| ||||| | ||||||| |||||| |||||||||||||||||||    
T  3851268 tacctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

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Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 30735254 - 30735179
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    |||||||||| |||| |||||||||  |||| |||||| |||||||||  |||||| |||||||||||||||||||    
T  30735254 tacctcatttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactcta 30735179  T

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Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 8350159 - 8350087
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||| |||| ||||||||| |||| ||||| || |||||| |||||| |||||||||||||||||||||||||    
T  8350159 taccttatttcctttgtaaa-ttttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

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Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 15470017 - 15469945
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||| |||||||||  |||| |||||| ||||||||| |||| ||||||||||||||||||||    
T  15470017 tacctcatttcctttataaaattttaattgtcacaaaa-ttatcacatatatgaatgttcaaataacacaactc 15469945  T

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Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 37685439 - 37685512
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||  |||||||||||||  |||| |||||| ||||||||| |||| |||||||||||||| |||||    
T  37685439 tacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactc 37685512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 37700079 - 37700006
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||  |||||||||||||  |||| |||||| ||||||||| |||| |||||||||||||| |||||    
T  37700079 tacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactc 37700006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 43775313 - 43775386
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    ||||| ||||||||||||||||||||||  |||| | ||||||| |||||| |||| || ||||||||||||||    
T  43775313 caatatctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaa 43775386  T

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Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 46907302 - 46907379
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| |||||||||  ||||  |||||||| ||  ||  |||||||||||||||||||||||||    
T  46907302 caatacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactct 46907379  T

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Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 31827058 - 31827138
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctatt 82  Q
    ||||| |||||||| ||||||||||||| |||||  |||||||| |||  |  || |||||||||||||||||||||||||    
T  31827058 caataactcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactctatt 31827138  T

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Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18434901 - 18434979
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||| |||||||||||| |||||||| ||||| ||||||||| |||  |  || ||| ||||||||||||||||||    
T  18434901 ccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaactct 18434979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 44914533 - 44914459
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaag-ttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| ||||||||||||||  ||||  |||||  || |||||| |||||||||||||||||||||||||    
T  44914533 tacctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 50149060 - 50149130
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||||||  ||||| |||||||| ||| ||  |  ||||||||||||||||||||||    
T  50149060 tcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaactct 50149130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 18512307 - 18512230
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||||||| |||||   |||| |||||| ||  || |||||| |||||||||||||||    
T  18512307 caatacctcattttctttataaaattttagttgtcttaaaaattatcatataaattgatgttgaaataacacaactct 18512230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19947709 - 19947632
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||| ||||||||| |||||  |||||||| ||| ||  ||  ||||||||||||||||||||    
T  19947709 ccaatacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 30570642 - 30570706
Alignment:
Q  13 tttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||||||||||||||  ||||| ||||| |||||| ||  ||| |||||||||||||||||||    
T  30570642 tttctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaact 30570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 30467487 - 30467420
Alignment:
Q  12 ttttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||| ||| ||||| ||||||||| ||| ||   | ||||||||||||||||||||||    
T  30467487 ttttctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactct 30467420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 40861217 - 40861154
Alignment:
Q  11 attttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacaca 74  Q
    |||| |||| ||||||||| ||||| |||||||||  ||||| ||| |||||||||||||||||    
T  40861217 atttcctttataaaattttagttgtcacaaaagttgacacatatatagatgttcaaataacaca 40861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 48103328 - 48103250
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatg-ttcaaataacacaactc 78  Q
    ||||||||| ||||||||||||||||||| |||||  |||||||| ||| ||  || |||| |||||||| ||||||||    
T  48103328 ccaataccttattttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtttcaaatatcacaactc 48103250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 9566924 - 9566847
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||  ||||||| ||||||||||| |||||  |||||||| ||| ||   || |||||||||||||||||||||    
T  9566924 caataccctattttctatgtaaaattttggttgtctcaaaagttgtcatataattgaatgttcaaataacacaactct 9566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 27533448 - 27533415
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgt 35  Q
    |||||||||||||||||||||||||||| |||||    
T  27533448 caatacctcattttctttgtaaaattttggttgt 27533415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 41677260 - 41677223
Alignment:
Q  42 agttatcacatttatggatgttcaaataacacaactct 79  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  41677260 agttgtcacatatatggatgttcaaataacacaactct 41677223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 51718583 - 51718517
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||| ||||||||| |||| ||| | ||||||||| ||||||    |||||||||||||||||||||||    
T  51718583 tcatttcctttgtaaagttttagttatcacaaaagttgtcacat----ggatgttcaaataacacaactct 51718517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 811428 - 811483
Alignment:
Q  82 tcattacatgtactttatgcttttaaggtccaaaatatcacttcatcaatttgactt 138  Q
    |||||| |||||||| ||||||| ||||||||||| |  ||||||||||||||||||    
T  811428 tcattatatgtacttgatgcttt-aaggtccaaaacagtacttcatcaatttgactt 811483  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 26207948 - 26208024
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||| |||||||||||| ||||||||  || | ||||||||||| |  |  || |||||||||||||||||||||    
T  26207948 caatacatcattttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaactc 26208024  T

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Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 26724933 - 26724857
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26724933 tacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaactctat 26724857  T

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Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 26732335 - 26732409
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  26732335 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 26732409  T

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Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 53801723 - 53801647
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  53801723 caatacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

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Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 51986152 - 51986226
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  51986152 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 51986226  T

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Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 27051050 - 27050973
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||||||||||||| ||||    
T  27051050 caatatctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacacatctct 27050973  T

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Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 46213080 - 46213153
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  46213080 tacctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaactc 46213153  T

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Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 15175654 - 15175729
Alignment:
Q  3 aatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||||| |||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||| |||||||    
T  15175654 aatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

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Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 23369293 - 23369219
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||| ||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  23369293 tacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 23369219  T

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Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 44539844 - 44539918
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| |||| |||||||||||||||||||||    
T  44539844 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 44539918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 29175332 - 29175409
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||| ||||||| |||||||||||||| ||||| ||||||||| |||||| |||| |||||||||||||||||||||    
T  29175332 caatagctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 29175409  T

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Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 37997361 - 37997438
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||| |||||||||||| |||| ||||    
T  37997361 caatacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcacagctct 37997438  T

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Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 36178016 - 36178091
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    |||||||||| |||| ||||||||| ||||| |||||||||||||||| |||  ||||||||||||||||||||||    
T  36178016 tacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactcta 36178091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 10250472 - 10250406
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    ||||||||||||||||||||| ||||| ||||||||| || ||| ||||||||||||||||||||||    
T  10250472 tcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaa 10250406  T

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Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 24575816 - 24575742
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    |||||||||||||| |||| ||||||||| ||||| ||||||||| |||||| ||| ||||||||||||||||||    
T  24575816 ccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 38376448 - 38376378
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||||||||||||||  |||| |||||| ||||||||| ||| |||||||||||||||||||||    
T  38376448 ctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 38382428 - 38382505
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  38382428 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 38382505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 39478544 - 39478621
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||| || |||||||||| ||  |||||||||||    
T  39478544 caatacctcattttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgtttaataaacacaactct 39478621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 43175094 - 43175167
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| ||||||||||||||  || | ||||||||| |||||| |||||||||||||||||||||||||    
T  43175094 tacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 47181948 - 47182025
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  47181948 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 47182025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 48402161 - 48402084
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  48402161 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 48402084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 31641526 - 31641452
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||| |||| |||| ||||||||| ||||| |||||||||||||| | |||| |||||||||||||||||||||    
T  31641526 taccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactct 31641452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 37297166 - 37297232
Alignment:
Q  13 tttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||| |||||||||||| ||||| ||||||||| ||| || ||||||||||||||||||||||||||    
T  37297166 tttccttgtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactct 37297232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 39440594 - 39440667
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||| |||||||||  |||| ||||||||| |||||| |||| ||||||||||||||||||||    
T  39440594 tacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 56364009 - 56363932
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||||||| |||||  |||||||| |||  |  |||||||||||||||||||||||||    
T  56364009 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactct 56363932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 11068800 - 11068868
Alignment:
Q  7 cctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    |||||||| |||||||||||||| ||||  ||||||||| |||||| |||| |||||||||||||||||    
T  11068800 cctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaa 11068868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 2575748 - 2575677
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||| ||||| ||||||||| ||| ||  || ||||||||||||||||||||||    
T  2575748 ctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactct 2575677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 5622568 - 5622643
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    |||||||||| |||||||||||||| ||| | ||||||||| | |||| ||| ||| |||||||||||||||||||    
T  5622568 tacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaactcta 5622643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 27965111 - 27965170
Alignment:
Q  21 taaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    ||||||||| ||||| ||| ||||| |||||| |||||||||||||||||||||||||||    
T  27965111 taaaattttggttgtcacagaagttgtcacatatatggatgttcaaataacacaactcta 27965170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 26492121 - 26492191
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||| ||||||||||||||  |||| |||||| || |||||| ||| ||||||||||||||||||||||    
T  26492121 tcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactct 26492191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 50721702 - 50721628
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctatt 82  Q
    |||||||||||||||||||||| |||||| |||| ||| ||| ||  |  |||||||||||||||||||||||||    
T  50721702 ctcattttctttgtaaaattttagttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactctatt 50721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 34616668 - 34616745
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||| |||||||||||| ||||||||| |||||  |||||||| ||| ||  || ||||||||||||||||||||||    
T  34616668 caatatctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactct 34616745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 38134465 - 38134528
Alignment:
Q  7 cctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataa 70  Q
    |||||||| |||||||||||||| ||| | ||||||||| |||||| |||| ||||||||||||    
T  38134465 cctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 45083086 - 45083149
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataaca 72  Q
    ||||||||||| |||||||||  |||| | ||||||| |||||| |||||||||||||||||||    
T  45083086 tcattttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 42853684 - 42853761
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| |||||||||  ||||  ||||| || ||||    |||||||||||||||||||||||||    
T  42853684 caatacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactct 42853761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 5233621 - 5233558
Alignment:
Q  15 tctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||||||||  ||||| |||||||| | ||||  || |||||||||||||||||||||    
T  5233621 tctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaactc 5233558  T

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Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 53786142 - 53786103
Alignment:
Q  39 aaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  53786142 aaaagttgtcacatatatggatgttcaaataacacaactc 53786103  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 7632419 - 7632349
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||| ||||||||||||| |||||| |||| ||| ||| ||  |  |||||||||||||||||||||    
T  7632419 ctcattttatttgtaaaattttggttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactc 7632349  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 19473920 - 19473847
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    |||||| |||||||||||||||||||||  ||||  |||||||| ||| ||  ||| || ||||||||||||||    
T  19473920 caatacttcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaa 19473847  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 26908027 - 26907970
Alignment:
Q  21 taaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||  |||| | |||| ||||||||| ||||||| |||||||||||||||||    
T  26908027 taaaattttaattgtcataaaaattatcacatatatggatattcaaataacacaactc 26907970  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 2268438 - 2268406
Alignment:
Q  47 tcacatttatggatgttcaaataacacaactct 79  Q
    |||||| ||||||||||||||||||||||||||    
T  2268438 tcacatatatggatgttcaaataacacaactct 2268406  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 46634235 - 46634271
Alignment:
Q  42 agttatcacatttatggatgttcaaataacacaactc 78  Q
    |||| |||||| |||||||||||||||||||||||||    
T  46634235 agttgtcacatatatggatgttcaaataacacaactc 46634271  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 50831715 - 50831639
Alignment:
Q  6 acctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctatt 82  Q
    ||||| |||||||||||||||| | |||||  |||||||| |||     |||| |||||||||||||||||||||||    
T  50831715 acctctttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactctatt 50831639  T

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Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 32316889 - 32316812
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctatt 82  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||||||    
T  32316889 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctatt 32316812  T

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Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34047493 - 34047571
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||| ||| |||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||||    
T  34047493 ccaatatctctttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactct 34047571  T

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Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 552903 - 552976
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  552903 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 552976  T

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Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 26595456 - 26595533
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||| ||  |||||||||||||||||||||||||    
T  26595456 caatacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactct 26595533  T

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Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 18737531 - 18737460
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacac 73  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||||||  |||||||||||||||||||    
T  18737531 caatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

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Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 15974722 - 15974792
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||| |||||||||||||| ||||| ||||||||| | |||| ||||||||||||||||||||||||||    
T  15974722 tcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactct 15974792  T

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Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 33430323 - 33430249
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| |||| |||| ||||||||||||||||    
T  33430323 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactct 33430249  T

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Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 16199557 - 16199634
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  16199557 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 16199634  T

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Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 31077904 - 31077977
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||| || |||||||||||||| ||||| ||||||||| |||||| |||| || |||||||||||||||||    
T  31077904 tacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

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Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 1156833 - 1156905
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    ||||||| ||||  ||||||||  |||| ||||||||||||| || |||||||||||||||||||||||||||    
T  1156833 ctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactcta 1156905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 13689958 - 13689882
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||||| |||| ||||||||| |||||   |||| || |||||| |||||||||||||||||||||||||    
T  13689958 caatacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 11612296 - 11612370
Alignment:
Q  3 aatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||||||||||||||||||||||||  || | |||||| ||||||||| |||  || ||||||||||||||||    
T  11612296 aatacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 14818042 - 14818115
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||| ||||||||| ||||| ||||||||| ||| || |||  ||||||||||||||||||||    
T  14818042 tacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 5694115 - 5694039
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||||| |||||||||||||  |||||  |||||||| ||||||  ||| ||||| ||||||||||||||    
T  5694115 caatacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 22079527 - 22079451
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||| |||||||||||| |||||||| ||||| ||||||||  |||  |  ||||||||||||||||||||||||    
T  22079527 caatacatcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactc 22079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 30423516 - 30423438
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    |||||||||||||||||| ||||  |||  ||||  |||||||||||||||  || |||||||||||||||||| ||||    
T  30423516 caatacctcattttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaataacacaaatcta 30423438  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 4820474 - 4820551
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||| |||||||||||||||||||||||  ||||  ||||||||||||  |  || | ||||||||||||||||||||    
T  4820474 caatgcctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactct 4820551  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 78
Target Start/End: Complemental strand, 5080502 - 5080467
Alignment:
Q  43 gttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||||||||||||||    
T  5080502 gttatcacatatatggatgttcaaataacacaactc 5080467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21968857 - 21968781
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||||| || ||||| ||||||||||  ||||  |||||| ||  |||||| ||||||||||||||||||    
T  21968857 ccaatacctcattttattcgtaaattttttgttgtctcaaa--ttatcaaataaatggatcttcaaataacacaactct 21968781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 24900887 - 24900958
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||||||||||||  ||||| |||| ||| ||| ||  |  ||||||||||||||||||||||    
T  24900887 ctcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacacaactct 24900958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 30457612 - 30457690
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    |||||||||||||||| ||| ||||||| ||| |  |||||||| ||| ||  ||||||||| || |||||||||||||    
T  30457612 caatacctcattttctatgtgaaattttggttatctcaaaagttgtcatataaatggatgttgaattaacacaactcta 30457690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 3853271 - 3853206
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaa 67  Q
    ||||| ||||||||||||||||||| ||||||||  |||||||| ||| ||  ||| |||||||||    
T  3853271 caatatctcattttctttgtaaaatctttgttgtctcaaaagttgtcatataaatgaatgttcaaa 3853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 46624017 - 46624091
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||| ||||||||||||||||||||||||||    
T  46624017 tacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactct 46624091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 41309227 - 41309303
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    |||||||||||||||||||||||||  |||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  41309227 tacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactctat 41309303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 27541463 - 27541389
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  27541463 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 27541389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 16969527 - 16969454
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  16969527 tacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 32924242 - 32924169
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  32924242 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 36670975 - 36670902
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||  ||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  36670975 tacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 52939761 - 52939836
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    |||||||||| |||||||||||||| ||||| || |||||| |||||| |||||||||||||||||||||||||||    
T  52939761 tacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactcta 52939836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 13735840 - 13735913
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| ||||| |||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  13735840 tacctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 42357045 - 42356972
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||| |||||| || |||||| |||||||||||||||||||||||||    
T  42357045 tacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44413360 - 44413283
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||||||| ||||||||||||||  |||| ||||||||| |||||| ||| |||||||||||||||||||||    
T  44413360 ccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 52254099 - 52254023
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    |||||||||| |||||||||||||| ||||| |||||| || |||||| ||||||||||||||| ||||||||||||    
T  52254099 tacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactctat 52254023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31157642 - 31157564
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||| |||| ||||||||||||||  | || ||| |||||||||||| ||||||||||||||||||||||||||    
T  31157642 ccaatacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaactct 31157564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 35377046 - 35376968
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||| |||  |  |||||||||||||||||||||||||    
T  35377046 ccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactct 35376968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 44856063 - 44856137
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| | | ||||| |||||| ||||||||||||||||||||||||||    
T  44856063 tacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactct 44856137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 13348098 - 13348021
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||||||||||||| |||||  |||||||| ||| ||  |||||||||||||||||| ||||||    
T  13348098 caatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactct 13348021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 21217619 - 21217696
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  21217619 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 21217696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 26014922 - 26014995
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| ||| |||||| ||||||||||||||    
T  26014922 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 37057021 - 37056944
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||||||||||||||| || |||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  37057021 caatacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 37056944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 42358602 - 42358529
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    ||||||||||||| ||||| ||||||||  |||| ||||||||| |||||| ||||||||||||||||||||||    
T  42358602 caatacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 47472439 - 47472512
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| ||| ||||||||||||||| |||||    
T  47472439 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactc 47472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 37503711 - 37503635
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||| ||||||| ||||| |||||||| ||||| |||||||||||||||| |||  ||||||||||||||||||||    
T  37503711 caatatctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 23592565 - 23592640
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||||||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||    
T  23592565 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 24256735 - 24256660
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    ||||||||||||| ||||||||||||||  |||| ||||||||| |||||| ||| ||| ||||||||||||||||    
T  24256735 caatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacacaact 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 55151681 - 55151602
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    |||||| |||||| ||||||||||||||  |||| ||||||||| |||||| |||  |||||||||||||||||||||||    
T  55151681 caatacttcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactctat 55151602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 7934095 - 7934157
Alignment:
Q  16 ctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||||||| ||||| |||||| || |||||| |||||||||||||||||||||||||    
T  7934095 ctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 19149103 - 19149173
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||| ||||||||||||||  |||| |||||| || |||||| |||||||||||||||||||||||||    
T  19149103 ctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 33939352 - 33939422
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||| ||||| | |||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  33939352 tcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 33939422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 38926738 - 38926812
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||| |||| |||||||||||||| ||||| || |||||| |||||| ||| ||||||||||||||||||||||    
T  38926738 taccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactct 38926812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 52326129 - 52326203
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| ||||||||||||||  |||| | ||||||| ||| || ||||||||||||||||||||||||||    
T  52326129 tacctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactct 52326203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 44383296 - 44383373
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| |||||||||  ||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  44383296 caatacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 44383373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 35597272 - 35597344
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||| ||| |||||||||||||| ||||| ||||||||| |||||| |||| || ||||||||||||||||    
T  35597272 tacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaact 35597344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 5114188 - 5114267
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctattca 84  Q
    |||||||||||||||||||||||||  |||| | |||| || ||||||  || |||||||||||||||||||||| ||||    
T  5114188 tacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactcttttca 5114267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 288839 - 288909
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||  |||||||||||||  ||||||||| |||| |||||| ||||||| |||||||||||||||||    
T  288839 ctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 7668141 - 7668079
Alignment:
Q  13 tttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    |||| ||| |||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||    
T  7668141 tttccttgcaaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaa 7668079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8847216 - 8847289
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    ||||||||||||||| |||||||||||||  || | ||||||||| | |||| ||||||||||||||||||||||    
T  8847216 ccaatacctcattttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataacacaa 8847289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 23600702 - 23600775
Alignment:
Q  4 atacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||| ||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||    
T  23600702 atacntcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 37302656 - 37302730
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| ||||| ||||||||  |||| ||||||||| ||| || ||||||||||||||||| ||||||||    
T  37302656 tacctcatttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactct 37302730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 5244339 - 5244408
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacaca 74  Q
    |||||||||| |||||||||||||| ||||| |||||| || |||||| |||  ||||||||||||||||    
T  5244339 tacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacaca 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 28539697 - 28539629
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||||||||| |||||||| ||| | |||||||||||||  |  |||||||||||||||||||||||    
T  28539697 tcattttctttgcaaaattttggttatcacaaaagttatcatctaaatggatgttcaaataacacaact 28539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 44445402 - 44445478
Alignment:
Q  3 aatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||| |||||||||||| ||||||||| ||||| | ||||||| | |||| ||| ||||||||||||||| ||||||    
T  44445402 aatatctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactct 44445478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 45711403 - 45711355
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcac 50  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| ||||    
T  45711403 caatacttcattttctttgtaaaattttggttgttacaaaagttgtcac 45711355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25641548 - 25641470
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||| ||||||| ||||||| ||| |||||  |||||||| ||| ||  |||||||||||||||| ||||||||    
T  25641548 ccaataccttattttctatgtaaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataatacaactct 25641470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 44813246 - 44813320
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||| |||| ||||||||||||||  |||  ||||||||| |||||| ||| ||||||||||| ||||||||||    
T  44813246 tacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactct 44813320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 20547951 - 20547904
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacat 52  Q
    |||||||||| |||||||||||||| ||||| ||||||||| ||||||    
T  20547951 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacat 20547904  T

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Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 42478086 - 42478143
Alignment:
Q  24 aatttttgttgttacaaaagttatcacatttat--ggatgttcaaataacacaactct 79  Q
    |||||| ||||| ||||||||||||| || |||  |||||||||||||||||||||||    
T  42478086 aattttggttgtcacaaaagttatcatatatatatggatgttcaaataacacaactct 42478143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42889091 - 42889168
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||| |||||||||||||||||||||| ||| |  |||||||| |||  |  || |||||| ||||||||||||||    
T  42889091 ccaataactcattttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacacaactc 42889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 51982206 - 51982283
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||| ||||||||| ||||||||| |||||  ||||| || | | ||  |||||| ||||||||||||||||||    
T  51982206 caataccttattttctttataaaattttagttgtctcaaaaattgttatataaatggattttcaaataacacaactct 51982283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 11630714 - 11630642
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacaca 74  Q
    |||||| |||||||||||||||||||||  ||||  ||||| || ||| ||  ||| ||||||||||||||||    
T  11630714 caatacttcattttctttgtaaaattttaattgtctcaaaaattgtcatataaatgaatgttcaaataacaca 11630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 28306093 - 28306020
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  28306093 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 14051276 - 14051200
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||  ||||||||||||||||    
T  14051276 tacctcattttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactctat 14051200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 15479576 - 15479652
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||||||| |||||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  15479576 caatacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 18258754 - 18258680
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  18258754 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 18258680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 7287150 - 7287077
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||| |||| ||||||||||||||||||||    
T  7287150 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 33037630 - 33037703
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  33037630 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 5168293 - 5168368
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||| || |||| ||||||||||||||||||||||    
T  5168293 tacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactcta 5168368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 26791202 - 26791131
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||| |||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  26791202 ctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 26791131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 1671652 - 1671726
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| ||||||||||||||  |||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  1671652 tacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 1671726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 36739058 - 36739132
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||  ||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  36739058 tacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactct 36739132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 8686998 - 8687075
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||||||||||||||||||  |||||| ||||||| |||||| |||| ||||||||||||||| |||||    
T  8686998 caatacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactct 8687075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 41321362 - 41321438
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||||| |||||||||||||| ||||| |||||| || |||||| ||||||| |||||||||||||||||    
T  41321362 caatacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 17626093 - 17626170
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  17626093 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 17626170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 1764334 - 1764406
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||||||| |||| ||||||||| ||||| ||||||||| |||||| |||| |||||||||||||||||||    
T  1764334 tacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 3565191 - 3565269
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    |||||||||||||||||||||||||||| |||||  |||||||| ||||     |||||||||||||||||||||||||    
T  3565191 caatacctcattttctttgtaaaattttggttgtctcaaaagttgtcactcaagtggatgttcaaataacacaactcta 3565269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 7552931 - 7552854
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||| |||||||||||| |||||||| ||||| ||||||||| |||  |  |||||||||||||||||||||||||    
T  7552931 caatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactct 7552854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 22972225 - 22972301
Alignment:
Q  3 aatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||| ||||||||||||||||||| |||||  |||||||| | | ||  |||||||||||||||||||||||||    
T  22972225 aataccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaactct 22972301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 35634785 - 35634722
Alignment:
Q  16 ctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||| ||| | | ||||||| |||||| ||||||||||||||||||||||||||    
T  35634785 ctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactct 35634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 1274465 - 1274541
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||| ||||||  |||||||||||||| ||||  | ||||||| |||||| ||||||||||||||||||||||||||    
T  1274465 caatatctcattccctttgtaaaattttggttgc-ataaaagttgtcacatatatggatgttcaaataacacaactct 1274541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 7076525 - 7076464
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataa 70  Q
    |||||| |||||||||||||| ||||| ||||||||| |||||| |||| ||||||||||||    
T  7076525 tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 13168635 - 13168704
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    ||||||| ||||||||||||||  |||| ||||||||| |||||| |||| ||||| |||||||||||||    
T  13168635 ctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 14923183 - 14923256
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||  ||||||||||||| ||| | || |||||| |||||| ||| |||||||||||||||||||||    
T  14923183 tacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 28467412 - 28467340
Alignment:
Q  7 cctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||| |||| ||||||||| ||||| |||||| || |||||| |||| ||||||| |||||||||||||    
T  28467412 cctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactct 28467340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 39591793 - 39591864
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||| ||||| ||||| ||| ||| ||  || ||||||||||||||||||||||    
T  39591793 ctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactct 39591864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 39592185 - 39592256
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||| ||||| ||||| ||| ||| ||  || ||||||||||||||||||||||    
T  39592185 ctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactct 39592256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 2972431 - 2972504
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    ||||||||||||| ||| || |||||||  |||| ||||||||| |||||| |||  |||||||||||||||||    
T  2972431 caatacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 1079883 - 1079850
Alignment:
Q  47 tcacatttatggatgttcaaataacacaactcta 80  Q
    ||||||||||| ||||||||||||||||||||||    
T  1079883 tcacatttatgaatgttcaaataacacaactcta 1079850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18660865 - 18660941
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||| |||||| |||||||||| |||  |||| ||||||||||| |||| |||| |||||| ||||| |||||||    
T  18660865 ccaatacttcatttcctttgtaaaagtttgattgt-acaaaagttatgacatatatgaatgttcgaataatacaactc 18660941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 1079917 - 1079889
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttt 29  Q
    |||||||||||||||||||||||||||||    
T  1079917 ccaatacctcattttctttgtaaaatttt 1079889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 13309991 - 13310063
Alignment:
Q  3 aatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    ||||||||||||||||||||||| |||  ||||  ||||| || |||  |  |||||||||||||||||||||    
T  13309991 aatacctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaa 13310063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 2076676 - 2076753
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||||| ||| ||||||||||||||||||||||    
T  2076676 caatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactct 2076753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 22888782 - 22888704
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||| ||||||||||||||  |||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  22888782 ccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 22888704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 43487489 - 43487563
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| |||||||||||| || |||||| ||||||||||||||||||||||||||    
T  43487489 tacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactct 43487563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 18254167 - 18254096
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||| |||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  18254167 ctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 18254096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6049310 - 6049236
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    |||||||||||||| ||||||||||||||  |||| ||||||||| |||||| ||||||||||||||||||||||    
T  6049310 ccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 9990805 - 9990875
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||| ||||||||||||||  |||| |||||||||||||||| ||||||||||||||||||||||||||    
T  9990805 tcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactct 9990875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 9207700 - 9207772
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||||||| |||||||||||||| ||||| |||||| ||||||||| ||| ||||||||||||||||||||    
T  9207700 tacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaact 9207772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 32477440 - 32477516
Alignment:
Q  3 aatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||| |||||| ||||||| ||||| ||||||||| |||||| |||| |||||||||||||||||||||    
T  32477440 aatacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 32477516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 41195691 - 41195770
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    ||||| ||||||| |||||||||||||| ||||| ||||||||| | |||| |||| |||||||||||||||||||||||    
T  41195691 caatatctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactctat 41195770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 1248796 - 1248870
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| ||||||||||||||  || | ||||||||| |||||| ||||||||||||||||||||||||||    
T  1248796 tacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaactct 1248870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 9647246 - 9647316
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||| |||||||||||||| ||||| |||||||||||| ||| |||| |||||||||||||||||||||    
T  9647246 tcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaactct 9647316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 42421859 - 42421785
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||| ||||||||| ||||| ||||||||| |||||| |||| |||||||||||||||||||||    
T  42421859 tacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 42421785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 37737935 - 37737858
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||| ||||||| ||||||||| |||| ||||| ||||||||| |||||| |||||| |||||||||||||||||||    
T  37737935 caatatctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaactct 37737858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 41056711 - 41056636
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||||||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||    
T  41056711 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 9760128 - 9760202
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| ||| | |||||||| ||||| ||||||||| |||||| ||| ||||||||||||||||||||||    
T  9760128 tacctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactct 9760202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 21611604 - 21611542
Alignment:
Q  17 tttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||| ||||| | ||||||| |||||| ||||||||||||||||||||||||||    
T  21611604 tttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaactct 21611542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 25270546 - 25270469
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||||||| |||||  | |||||| ||| ||  |||||||||||||||||||||||||    
T  25270546 caatacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactct 25270469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 3097824 - 3097748
Alignment:
Q  3 aatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||| |||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  3097824 aataactcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 3097748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 9194351 - 9194425
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||  ||||||||||||| ||||| |||||| || | |||| |||| |||||||||||||||||||||    
T  9194351 tacctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactct 9194425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 3838837 - 3838768
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||| ||||||||||||||  || | ||||||||| |||||| ||| |||||||||||||||||||||    
T  3838837 tcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 7698281 - 7698354
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||| |||| ||||||||||||||  || | |||||||||||||||| ||| ||||||| |||||||||||||    
T  7698281 tacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacacaactc 7698354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 13333134 - 13333057
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||| ||||||||||| ||||||||| |||||  |||||||| ||| ||  || ||||||||||||||||||||||    
T  13333134 caatacatcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactct 13333057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 27490693 - 27490616
Alignment:
Q  3 aatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    ||||| |||||||||||||||||||||  |||| ||||||||| |||     ||||||||||||||||||||||||||    
T  27490693 aatacatcattttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactcta 27490616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 41042361 - 41042438
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||| ||||||| |||| ||||||||| ||||| | |||| || |||||| ||||||||||||||||||| ||||||    
T  41042361 caatatctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactct 41042438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8848662 - 8848584
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||| |||||||||||| ||||||||  |||| |||||| ||||||  |  || ||||||||||||||||||||||    
T  8848662 ccaatacatcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaactct 8848584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 19633392 - 19633466
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatc-acatttatggatgttcaaataacacaactc 78  Q
    |||||||||| ||||||||||||||  |||| |||||||||||| |||| |||  |||||||||||| |||||||    
T  19633392 tacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19633466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 19830293 - 19830367
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatc-acatttatggatgttcaaataacacaactc 78  Q
    |||||||||| ||||||||||||||  |||| |||||||||||| |||| |||  |||||||||||| |||||||    
T  19830293 tacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19830367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 34945051 - 34944979
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    ||||||||||  ||||||||||||| ||||| || |||||| |||||| |||| || ||||| ||||||||||    
T  34945051 tacctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacacaact 34944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 42091465 - 42091393
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcac--atttatggatgttcaaataacacaa 75  Q
    |||||| ||| |||||||||||||| ||||| |||||| || ||||  || ||| ||||||||||||||||||    
T  42091465 tacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaataacacaa 42091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 22416353 - 22416385
Alignment:
Q  47 tcacatttatggatgttcaaataacacaactct 79  Q
    |||||| ||||||||||||||||||||||||||    
T  22416353 tcacatatatggatgttcaaataacacaactct 22416385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 36660414 - 36660339
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||| ||||||||||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||    
T  36660414 caatacttcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaact 36660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 11253506 - 11253427
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    |||||||||||||||||||||||||||| || || ||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  11253506 caatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactctat 11253427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 42768316 - 42768387
Alignment:
Q  7 cctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  42768316 cctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 42768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 22719550 - 22719623
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||||||||||||||||| ||| | ||||||||| |||||| ||||| |||||||||||||||||||    
T  22719550 tacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 32501157 - 32501080
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctatt 82  Q
    |||||||||| |||||||||||||| ||||| |||||| || |||||| |||||||||||||||||||||| ||||||    
T  32501157 tacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacacaattctatt 32501080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 12898887 - 12898816
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||| |||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||| ||||||    
T  12898887 ctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacataactct 12898816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 34186717 - 34186792
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    |||||||||| ||||| ||||||||  |||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  34186717 tacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactcta 34186792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 24479330 - 24479408
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    ||||| ||||||| |||||||||||||| ||||| ||||||||||||| || |||| ||| ||||||||||||||||||    
T  24479330 caatatctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactcta 24479408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 29025367 - 29025445
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    |||||||||||||||||||||||||||| |||||  |||||||| ||| ||  ||||||||| ||||||||||||||||    
T  29025367 caatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaactcta 29025445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 37449386 - 37449312
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| ||||||||||||||  || | |||||||||||||||| ||||||| ||||||||||||||||||    
T  37449386 tacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactct 37449312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 36251436 - 36251503
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataaca 72  Q
    |||||||||| ||||||||||||||  |||| || ||||||||||||| |||||||||||||||||||    
T  36251436 tacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 43397894 - 43397965
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||||||| ||||| ||||||| | |||||| ||||||||||||| ||||||| ||||    
T  43397894 ctcattttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacacatctct 43397965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 27325868 - 27325942
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| ||||||||||||||  || | || |||||| |||||| ||||||||||||||||||||||||||    
T  27325868 tacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactct 27325942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 37133819 - 37133749
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||||||||||| ||||| ||||||||| |||  |  ||||||||| |||||||||||||||    
T  37133819 tcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactct 37133749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 13106587 - 13106664
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||| ||||||||||||| || | ||||||| ||||||| |||| |  |||| ||||||||||||||||||||    
T  13106587 caatacctctttttctttgtaaatttatggttgttataaaagttgtcacctaaatggttgttcaaataacacaactct 13106664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 36816579 - 36816507
Alignment:
Q  3 aatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    ||||| |||||||||||| ||||||||  || | ||||||||| |||||| ||| ||||||||||||||||||    
T  36816579 aatacgtcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 5277460 - 5277393
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataaca 72  Q
    |||||||||| ||||||||||||||  |||| ||| || || |||||| |||||||||||||||||||    
T  5277460 tacctcatttcctttgtaaaattttgattgtcacataaattgtcacatgtatggatgttcaaataaca 5277393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 32133430 - 32133505
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||||| ||||| ||||||||||||| ||| |  ||||| |||||| ||  |||||||||||||||||||||||    
T  32133430 caataccttattttatttgtaaaattttggttatctcaaaatttatcatataaatggatgttcaaataacacaact 32133505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 7271963 - 7272033
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||  |||| ||||||||  |||| ||||||||| |||||| |||||||||||| ||||||||||||    
T  7271963 ctcatttcttttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaactc 7272033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 4054247 - 4054174
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||||  |||||||| ||||  |||| ||||||||| |||||| |||  ||||||||||||||||||||    
T  4054247 tacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaactc 4054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 10839437 - 10839369
Alignment:
Q  11 attttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||||||||| |||||  ||||| |||||| |   ||||||||||||||||||| |||||    
T  10839437 attttctttgtaaaattttagttgtctcaaaaattatcataaaaatggatgttcaaataacactactct 10839369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 23754664 - 23754594
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||||||||||||||| |||||| |||| ||| ||| ||  |   ||||||||||||||||||||    
T  23754664 ctcattttctttgtaaaattttggttgttgcaaaggttgtcatataaaataatgttcaaataacacaactc 23754594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 10692552 - 10692616
Alignment:
Q  16 ctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    ||||||||||||||  |||| | | |||||  ||||| ||||||||||||||||| |||||||||    
T  10692552 ctttgtaaaattttgattgtcagagaagttgacacatatatggatgttcaaataatacaactcta 10692616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 31249455 - 31249423
Alignment:
Q  47 tcacatttatggatgttcaaataacacaactct 79  Q
    |||||| ||||||||||||||||||||||||||    
T  31249455 tcacatatatggatgttcaaataacacaactct 31249423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3937088 - 3937010
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||| |||| ||||||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  3937088 ccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactct 3937010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 38956579 - 38956506
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  38956579 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 43942743 - 43942816
Alignment:
Q  6 acctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||||||||| ||||  |||||| ||||||||| ||||||||||||||||||||||||||    
T  43942743 acctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactct 43942816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 25192878 - 25192804
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||| |||| || ||||||||||||||||||    
T  25192878 tacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactct 25192804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 41989694 - 41989628
Alignment:
Q  12 ttttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  41989694 ttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 24614277 - 24614200
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctatt 82  Q
    |||||||||| ||||||||||||||  || | |||||||||||||||| |||| ||||||||||||||||||||||||    
T  24614277 tacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactctatt 24614200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 43025453 - 43025525
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||| ||| ||||||| |||||||||||||||    
T  43025453 ctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaactcta 43025525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 44895533 - 44895460
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||||| ||||||||| | |||| ||||||||||||||||||| |||||    
T  44895533 tacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacataactc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 46022231 - 46022154
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||||||| |||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  46022231 caatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 46022154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 41189507 - 41189426
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcac--atttatggatgttcaaataacacaactctat 81  Q
    ||||||||||||| ||||||||||||||  |||| | ||||||||||||  || |||| |||||||||||||||||||||||    
T  41189507 caatacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaactctat 41189426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 7701651 - 7701728
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| ||||| ||| |||||  |||||||| ||| ||  |||||||||||||||||||||||||    
T  7701651 caatacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactct 7701728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 35072320 - 35072247
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    |||||||||||| ||||||||| |||||| |||||||| ||| ||  ||||||||||| |||||||||||||||    
T  35072320 ctcattttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttcagataacacaactctat 35072247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 32529817 - 32529745
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaact 77  Q
    |||||||||| ||||||||||||||  |||| |||||| || |||||| |||||||| |||||||||||||||    
T  32529817 tacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaact 32529745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 3614403 - 3614332
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    ||||| ||||||||||||||| |||||| |||||||| ||| ||  |||||||||||||||||| |||||||    
T  3614403 tcattgtctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacataactcta 3614332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 22918130 - 22918057
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| ||||||||||||||  ||||  |||||||| |||||| |||||||| |||||||| |||||||    
T  22918130 tacctcatttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataatacaactc 22918057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 31445431 - 31445504
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    ||||||||||||||||||||||  ||||| ||||| |||||| ||  |  ||||||||||||||||||||||||    
T  31445431 ctcattttctttgtaaaattttgattgttgcaaaaattatcatataaaatgatgttcaaataacacaactctat 31445504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 35098661 - 35098588
Alignment:
Q  8 ctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    |||||||||| | ||||||||| |||||| |||||||| ||| ||  |||||| ||||||||||||||||||||    
T  35098661 ctcattttctatataaaattttggttgtttcaaaagttgtcatataaatggatattcaaataacacaactctat 35098588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 40417881 - 40417957
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| ||||||||||||||||| |||||  |||||||| ||  ||  || |||||||||||||||||||||    
T  40417881 caatacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactc 40417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 40112915 - 40112840
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactcta 80  Q
    ||||| |||| ||||||||||||||  |||| | | ||||| | |||| |||||||||||||||||||||||||||    
T  40112915 taccttatttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactcta 40112840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 45851164 - 45851095
Alignment:
Q  9 tcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||| |||||||||||||| ||||| | |||| || | |||  |||||||||||||||||||||||||    
T  45851164 tcatttcctttgtaaaattttagttgtcaaaaaaattgtgacagatatggatgttcaaataacacaactc 45851095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46578100 - 46578023
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||  ||| ||||||||| ||||| | | || ||||||||| ||||||||||||||||| |||||||    
T  46578100 ccaatacctcgtttcttttataaaattttggttgtcatagaaattatcacatatatggatgttcaaataagacaactc 46578023  T

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Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 48062164 - 48062241
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||||||||||| |||||||||  ||||  ||||| |||||||    | |||||||||||||||||||||||    
T  48062164 caatacctcattttctttataaaattttgattgtctcaaaaattatcactcaaacggatgttcaaataacacaactct 48062241  T

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Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 32803796 - 32803870
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaac 76  Q
    |||||| | ||||| | |||||||||||  ||||| |||||||| ||| ||  ||||||||||||||||||||||    
T  32803796 caatactttattttttatgtaaaattttaattgtttcaaaagttgtcatataaatggatgttcaaataacacaac 32803870  T

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Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42553004 - 42553078
Alignment:
Q  1 ccaatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaa 75  Q
    |||||||||| |||||||||||||||| | ||| |  ||||||||||||  |  |||| ||||||||||||||||    
T  42553004 ccaatacctctttttctttgtaaaattatggttttctcaaaagttatcaattaaatggttgttcaaataacacaa 42553078  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 43159539 - 43159463
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    ||||||||| ||||||||||||| || | ||||| |  |||||| |||| |  |||| |||||||||||||||||||    
T  43159539 caatacctctttttctttgtaaatttatggttgtcatcaaagttgtcacctaaatggttgttcaaataacacaactc 43159463  T

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Target: scaffold0519 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 11889 - 11968
Alignment:
Q  2 caatacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactctat 81  Q
    |||||||||||||||||||||||||||| || || ||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  11889 caatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactctat 11968  T

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Target: scaffold0056 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 76580 - 76506
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||||| |||||||||||||||    
T  76580 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactct 76506  T

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Target: scaffold0199 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 8778 - 8852
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactct 79  Q
    |||||||||| |||||||||||||| ||||| | ||||||| ||| || ||||||||||||||||||||||||||    
T  8778 tacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactct 8852  T

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Target: scaffold0098 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 49405 - 49478
Alignment:
Q  5 tacctcattttctttgtaaaatttttgttgttacaaaagttatcacatttatggatgttcaaataacacaactc 78  Q
    |||||||||| |||||||||||||| ||| | ||||||||| |||||| ||||||||||||||||||| |||||    
T  49405 tacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataacataactc 49478  T

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