View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14832_high_5 (Length: 258)

Name: NF14832_high_5
Description: NF14832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14832_high_5
NF14832_high_5
[»] chr3 (66 HSPs)
chr3 (5-252)||(11687161-11687408)
chr3 (1-117)||(35315898-35316015)
chr3 (1-116)||(54261169-54261285)
chr3 (3-118)||(10040498-10040613)
chr3 (1-118)||(25294901-25295019)
chr3 (1-113)||(6462358-6462471)
chr3 (3-119)||(10855324-10855441)
chr3 (1-119)||(48341960-48342079)
chr3 (1-118)||(26207849-26207967)
chr3 (1-117)||(51060329-51060446)
chr3 (1-116)||(33251605-33251721)
chr3 (1-116)||(47471775-47471890)
chr3 (1-117)||(29127861-29127978)
chr3 (7-115)||(35923677-35923786)
chr3 (1-117)||(45877396-45877513)
chr3 (1-116)||(29762203-29762319)
chr3 (3-116)||(47749155-47749268)
chr3 (6-117)||(13893868-13893980)
chr3 (1-116)||(29135856-29135972)
chr3 (1-116)||(42412822-42412938)
chr3 (8-119)||(51683009-51683121)
chr3 (7-116)||(46529924-46530034)
chr3 (3-116)||(49543462-49543576)
chr3 (1-117)||(41630560-41630677)
chr3 (1-117)||(49198293-49198410)
chr3 (1-116)||(3755513-3755629)
chr3 (1-116)||(28242221-28242337)
chr3 (3-118)||(30767297-30767413)
chr3 (1-112)||(3136742-3136853)
chr3 (3-116)||(15320129-15320243)
chr3 (2-116)||(45450496-45450608)
chr3 (3-119)||(55069729-55069846)
chr3 (3-87)||(15795544-15795628)
chr3 (1-116)||(39849015-39849130)
chr3 (3-113)||(31072824-31072935)
chr3 (37-111)||(33560808-33560882)
chr3 (6-111)||(49082772-49082878)
chr3 (3-116)||(3762994-3763107)
chr3 (3-118)||(7310753-7310869)
chr3 (3-118)||(30045762-30045878)
chr3 (5-116)||(32873601-32873712)
chr3 (1-112)||(47219091-47219203)
chr3 (14-116)||(7612987-7613090)
chr3 (1-87)||(53649699-53649786)
chr3 (3-116)||(7650170-7650284)
chr3 (41-118)||(24146417-24146494)
chr3 (1-117)||(40944825-40944942)
chr3 (3-115)||(41219537-41219649)
chr3 (1-116)||(7328787-7328902)
chr3 (13-116)||(37092565-37092669)
chr3 (3-117)||(928542-928657)
chr3 (18-116)||(11025438-11025535)
chr3 (6-116)||(19873316-19873420)
chr3 (2-48)||(41223087-41223133)
chr3 (3-87)||(52364850-52364935)
chr3 (1-41)||(23511586-23511626)
chr3 (3-118)||(26362017-26362131)
chr3 (1-112)||(47303537-47303649)
chr3 (3-61)||(3507583-3507642)
chr3 (3-46)||(8164567-8164610)
chr3 (1-36)||(8362601-8362636)
chr3 (1-59)||(26043812-26043871)
chr3 (3-112)||(28572261-28572371)
chr3 (3-40)||(7648760-7648797)
chr3 (1-38)||(40660375-40660412)
chr3 (1-41)||(33688970-33689010)
[»] chr1 (70 HSPs)
chr1 (1-113)||(47312947-47313059)
chr1 (1-116)||(11397937-11398052)
chr1 (1-118)||(5855464-5855582)
chr1 (1-116)||(49078058-49078174)
chr1 (1-119)||(10336457-10336576)
chr1 (1-115)||(41663904-41664019)
chr1 (3-116)||(12036794-12036908)
chr1 (1-105)||(33498887-33498992)
chr1 (3-118)||(18915809-18915925)
chr1 (6-116)||(9853330-9853440)
chr1 (1-119)||(10422729-10422848)
chr1 (3-116)||(15465909-15466023)
chr1 (1-118)||(17358519-17358637)
chr1 (7-116)||(33418169-33418279)
chr1 (5-117)||(18649404-18649517)
chr1 (2-106)||(45361931-45362036)
chr1 (1-117)||(48798118-48798235)
chr1 (1-112)||(32819-32931)
chr1 (6-113)||(2567223-2567331)
chr1 (3-118)||(2980981-2981097)
chr1 (1-118)||(30927775-30927894)
chr1 (3-116)||(8763935-8764049)
chr1 (1-118)||(9659227-9659344)
chr1 (1-113)||(10173019-10173132)
chr1 (1-116)||(5503975-5504091)
chr1 (13-117)||(8905211-8905315)
chr1 (3-94)||(16956432-16956524)
chr1 (1-116)||(26325756-26325872)
chr1 (1-116)||(31576595-31576711)
chr1 (3-116)||(28416889-28417004)
chr1 (6-116)||(34877934-34878045)
chr1 (3-116)||(15238156-15238270)
chr1 (3-116)||(17642054-17642168)
chr1 (3-112)||(43959871-43959981)
chr1 (3-116)||(50371884-50371998)
chr1 (3-99)||(6563402-6563499)
chr1 (7-116)||(25165346-25165454)
chr1 (1-117)||(32142894-32143010)
chr1 (3-119)||(34719717-34719834)
chr1 (6-117)||(40288530-40288642)
chr1 (10-116)||(18808209-18808316)
chr1 (6-116)||(31152660-31152771)
chr1 (3-117)||(33004065-33004180)
chr1 (1-115)||(45726481-45726596)
chr1 (11-96)||(34334353-34334439)
chr1 (3-116)||(45536653-45536766)
chr1 (3-116)||(50503411-50503525)
chr1 (1-117)||(26660081-26660198)
chr1 (1-117)||(32150970-32151087)
chr1 (2-77)||(16263528-16263604)
chr1 (1-117)||(17988708-17988824)
chr1 (3-84)||(37339795-37339878)
chr1 (13-116)||(51437413-51437517)
chr1 (1-36)||(19195391-19195426)
chr1 (5-112)||(31734237-31734344)
chr1 (9-116)||(46929794-46929901)
chr1 (7-113)||(5063898-5064004)
chr1 (1-119)||(17389713-17389831)
chr1 (3-48)||(21849255-21849300)
chr1 (1-118)||(26258638-26258755)
chr1 (31-116)||(41743217-41743302)
chr1 (1-116)||(12744571-12744687)
chr1 (1-116)||(12755561-12755677)
chr1 (1-116)||(14254316-14254432)
chr1 (3-118)||(14357697-14357813)
chr1 (52-118)||(892397-892463)
chr1 (3-80)||(13262063-13262141)
chr1 (1-38)||(10507721-10507758)
chr1 (67-116)||(40226357-40226406)
chr1 (68-116)||(42267688-42267736)
[»] chr6 (42 HSPs)
chr6 (1-117)||(21898594-21898711)
chr6 (1-117)||(29333186-29333302)
chr6 (7-98)||(30788906-30788996)
chr6 (1-116)||(5253270-5253386)
chr6 (1-116)||(14107405-14107521)
chr6 (3-116)||(24671915-24672029)
chr6 (3-116)||(2271352-2271464)
chr6 (1-117)||(8932607-8932724)
chr6 (1-117)||(8944073-8944190)
chr6 (1-113)||(13036051-13036164)
chr6 (1-109)||(34954666-34954774)
chr6 (1-116)||(6606144-6606260)
chr6 (3-116)||(10311518-10311632)
chr6 (3-116)||(19230608-19230720)
chr6 (1-116)||(8612021-8612137)
chr6 (1-118)||(29444812-29444930)
chr6 (1-112)||(3587992-3588104)
chr6 (3-85)||(12635792-12635875)
chr6 (14-116)||(15643890-15643991)
chr6 (3-116)||(19089445-19089559)
chr6 (3-119)||(13468877-13468994)
chr6 (10-113)||(3601034-3601138)
chr6 (2-113)||(9147251-9147363)
chr6 (1-116)||(9179783-9179899)
chr6 (3-94)||(12606399-12606491)
chr6 (3-105)||(9366472-9366575)
chr6 (2-119)||(21016799-21016917)
chr6 (1-117)||(8938657-8938774)
chr6 (3-48)||(13391302-13391347)
chr6 (37-117)||(3030702-3030782)
chr6 (1-48)||(5029832-5029880)
chr6 (2-40)||(33859367-33859405)
chr6 (1-41)||(8888905-8888945)
chr6 (1-37)||(13584497-13584533)
chr6 (6-112)||(10312694-10312801)
chr6 (1-36)||(11142631-11142666)
chr6 (3-37)||(9633674-9633708)
chr6 (9-117)||(32048397-32048506)
chr6 (1-38)||(375021-375058)
chr6 (57-118)||(17115001-17115062)
chr6 (72-116)||(5759575-5759619)
chr6 (1-41)||(10396496-10396536)
[»] chr4 (69 HSPs)
chr4 (1-117)||(38075380-38075497)
chr4 (1-117)||(53599007-53599124)
chr4 (1-118)||(29895733-29895851)
chr4 (1-117)||(1446773-1446890)
chr4 (1-116)||(13073486-13073602)
chr4 (3-112)||(5472897-5473007)
chr4 (1-116)||(6779159-6779275)
chr4 (3-116)||(2559255-2559369)
chr4 (3-116)||(38165975-38166089)
chr4 (3-120)||(41339444-41339562)
chr4 (3-116)||(47078406-47078520)
chr4 (1-118)||(52950028-52950146)
chr4 (3-117)||(24166397-24166512)
chr4 (3-117)||(27248375-27248488)
chr4 (3-109)||(295582-295688)
chr4 (3-116)||(3574495-3574609)
chr4 (1-99)||(15839982-15840080)
chr4 (5-116)||(4736545-4736657)
chr4 (3-99)||(36262816-36262911)
chr4 (5-116)||(55920982-55921094)
chr4 (1-119)||(26479996-26480115)
chr4 (3-116)||(15732497-15732611)
chr4 (2-111)||(40272379-40272489)
chr4 (1-117)||(8888969-8889086)
chr4 (1-117)||(15829646-15829763)
chr4 (54-119)||(19651546-19651611)
chr4 (1-113)||(40780908-40781021)
chr4 (5-117)||(43458560-43458673)
chr4 (1-117)||(42722426-42722542)
chr4 (6-116)||(14123964-14124075)
chr4 (56-117)||(12887306-12887367)
chr4 (3-99)||(20128274-20128371)
chr4 (3-116)||(1940826-1940937)
chr4 (3-81)||(3159518-3159597)
chr4 (13-116)||(27531717-27531820)
chr4 (1-87)||(42722624-42722711)
chr4 (3-117)||(49260714-49260829)
chr4 (1-117)||(20532456-20532573)
chr4 (31-110)||(13552068-13552148)
chr4 (1-116)||(20354585-20354701)
chr4 (1-97)||(24850674-24850770)
chr4 (52-116)||(34667701-34667765)
chr4 (1-83)||(7246693-7246776)
chr4 (1-40)||(17080068-17080107)
chr4 (1-111)||(20421727-20421837)
chr4 (3-113)||(29588687-29588798)
chr4 (1-95)||(36145262-36145357)
chr4 (3-50)||(47682431-47682478)
chr4 (72-122)||(7000466-7000516)
chr4 (1-94)||(38168227-38168320)
chr4 (1-118)||(41162929-41163047)
chr4 (3-116)||(48317324-48317438)
chr4 (52-113)||(6032739-6032800)
chr4 (1-113)||(8064845-8064957)
chr4 (3-40)||(21429326-21429363)
chr4 (1-42)||(46108714-46108755)
chr4 (3-95)||(55005355-55005448)
chr4 (3-118)||(14567900-14568021)
chr4 (5-113)||(14858662-14858770)
chr4 (3-87)||(21192619-21192702)
chr4 (1-117)||(31588631-31588750)
chr4 (30-116)||(1123867-1123954)
chr4 (1-40)||(16450325-16450364)
chr4 (2-48)||(35359752-35359799)
chr4 (3-61)||(48015122-48015181)
chr4 (7-37)||(8424582-8424612)
chr4 (72-116)||(14567199-14567243)
chr4 (1-89)||(17946465-17946553)
chr4 (3-39)||(37369091-37369127)
[»] chr5 (63 HSPs)
chr5 (1-116)||(41163507-41163622)
chr5 (1-116)||(19572668-19572784)
chr5 (1-117)||(1538374-1538491)
chr5 (5-116)||(5731971-5732083)
chr5 (1-116)||(30349523-30349639)
chr5 (3-118)||(37263183-37263298)
chr5 (1-118)||(18136327-18136445)
chr5 (1-116)||(20525782-20525898)
chr5 (1-116)||(28857072-28857188)
chr5 (1-119)||(42086268-42086387)
chr5 (5-118)||(25417234-25417347)
chr5 (1-116)||(9812816-9812932)
chr5 (1-116)||(12766075-12766191)
chr5 (3-118)||(26077083-26077199)
chr5 (3-116)||(5079275-5079389)
chr5 (3-119)||(35403561-35403678)
chr5 (12-108)||(1898953-1899050)
chr5 (3-116)||(3653963-3654075)
chr5 (3-96)||(38897768-38897861)
chr5 (1-116)||(12704958-12705074)
chr5 (1-95)||(13664225-13664320)
chr5 (7-109)||(14152001-14152104)
chr5 (1-118)||(14974371-14974487)
chr5 (3-116)||(7866525-7866639)
chr5 (3-116)||(38297013-38297127)
chr5 (1-113)||(7308411-7308524)
chr5 (1-117)||(9168300-9168415)
chr5 (1-116)||(23383592-23383717)
chr5 (1-116)||(42861265-42861381)
chr5 (6-119)||(4016307-4016421)
chr5 (32-118)||(6767130-6767216)
chr5 (3-116)||(8513463-8513577)
chr5 (8-113)||(20692880-20692986)
chr5 (1-97)||(14588664-14588761)
chr5 (4-116)||(39728331-39728444)
chr5 (1-62)||(9805002-9805064)
chr5 (1-116)||(14728026-14728143)
chr5 (3-96)||(30995085-30995179)
chr5 (3-61)||(38369699-38369757)
chr5 (3-64)||(42291554-42291616)
chr5 (3-83)||(12081885-12081966)
chr5 (3-99)||(28862786-28862883)
chr5 (52-116)||(24498927-24498991)
chr5 (37-117)||(28856920-28857000)
chr5 (5-116)||(2485141-2485252)
chr5 (5-40)||(11845852-11845887)
chr5 (3-116)||(20682666-20682781)
chr5 (1-40)||(40117436-40117475)
chr5 (1-118)||(20156191-20156309)
chr5 (1-118)||(35561865-35561983)
chr5 (1-116)||(20255313-20255429)
chr5 (77-117)||(31890031-31890071)
chr5 (1-116)||(18294531-18294646)
chr5 (1-40)||(20590020-20590059)
chr5 (2-37)||(20705587-20705622)
chr5 (3-113)||(23247400-23247511)
chr5 (3-112)||(41800925-41801035)
chr5 (13-117)||(16755004-16755109)
chr5 (3-40)||(21149755-21149792)
chr5 (3-60)||(25452926-25452983)
chr5 (3-40)||(43399149-43399186)
chr5 (1-41)||(7616940-7616980)
chr5 (13-112)||(25950641-25950741)
[»] chr2 (64 HSPs)
chr2 (1-118)||(7747215-7747333)
chr2 (1-117)||(10026663-10026780)
chr2 (1-117)||(38005344-38005461)
chr2 (3-117)||(2149243-2149359)
chr2 (3-117)||(8410073-8410188)
chr2 (1-117)||(20612582-20612700)
chr2 (3-117)||(42770700-42770815)
chr2 (1-117)||(10046524-10046640)
chr2 (3-119)||(21286384-21286501)
chr2 (1-116)||(3643934-3644050)
chr2 (1-117)||(24179513-24179627)
chr2 (1-116)||(38962706-38962822)
chr2 (1-99)||(41220595-41220694)
chr2 (3-113)||(45263716-45263827)
chr2 (3-116)||(44139427-44139541)
chr2 (3-117)||(44945536-44945650)
chr2 (1-117)||(331443-331560)
chr2 (1-117)||(34356148-34356265)
chr2 (2-117)||(19976855-19976971)
chr2 (3-118)||(21180363-21180479)
chr2 (8-118)||(14853421-14853532)
chr2 (1-119)||(18649073-18649192)
chr2 (3-113)||(37560119-37560230)
chr2 (1-117)||(2550810-2550927)
chr2 (3-87)||(10823032-10823117)
chr2 (1-117)||(22593077-22593193)
chr2 (3-99)||(25540453-25540550)
chr2 (3-116)||(18902579-18902693)
chr2 (3-118)||(11069819-11069935)
chr2 (1-116)||(13026458-13026574)
chr2 (3-77)||(3848963-3849038)
chr2 (1-116)||(25604538-25604653)
chr2 (3-116)||(10669535-10669649)
chr2 (3-116)||(41031955-41032068)
chr2 (1-117)||(14169656-14169773)
chr2 (1-116)||(39201555-39201671)
chr2 (6-116)||(2528393-2528504)
chr2 (1-116)||(6358198-6358314)
chr2 (1-116)||(12864167-12864283)
chr2 (3-106)||(25549681-25549785)
chr2 (6-109)||(39806937-39807041)
chr2 (5-119)||(20533058-20533173)
chr2 (1-116)||(33005695-33005810)
chr2 (1-87)||(34346334-34346421)
chr2 (1-92)||(2784900-2784991)
chr2 (3-113)||(35946685-35946795)
chr2 (3-36)||(9360797-9360830)
chr2 (3-119)||(15079423-15079540)
chr2 (3-87)||(15234110-15234195)
chr2 (7-116)||(16813218-16813327)
chr2 (7-116)||(16852497-16852606)
chr2 (66-119)||(23500794-23500847)
chr2 (1-58)||(29421285-29421341)
chr2 (1-113)||(31596479-31596592)
chr2 (1-37)||(13104872-13104908)
chr2 (3-50)||(27725949-27725997)
chr2 (1-92)||(41187676-41187768)
chr2 (53-116)||(13513948-13514011)
chr2 (3-112)||(7787003-7787113)
chr2 (5-118)||(16034878-16034992)
chr2 (3-116)||(29422158-29422272)
chr2 (1-116)||(3811738-3811854)
chr2 (56-112)||(20963212-20963268)
chr2 (3-113)||(28616428-28616540)
[»] chr7 (52 HSPs)
chr7 (1-117)||(48804628-48804745)
chr7 (3-114)||(34659174-34659286)
chr7 (1-116)||(43862019-43862135)
chr7 (3-119)||(1797403-1797520)
chr7 (5-116)||(43346830-43346942)
chr7 (1-116)||(43925458-43925574)
chr7 (1-119)||(10047923-10048042)
chr7 (5-118)||(17748433-17748547)
chr7 (1-116)||(4195249-4195365)
chr7 (13-116)||(22268088-22268192)
chr7 (3-118)||(47341820-47341936)
chr7 (1-116)||(19914750-19914865)
chr7 (3-116)||(16802069-16802183)
chr7 (3-116)||(21530694-21530808)
chr7 (1-117)||(18785614-18785731)
chr7 (1-117)||(27875135-27875251)
chr7 (1-116)||(4228801-4228914)
chr7 (1-116)||(13095804-13095920)
chr7 (1-116)||(22973913-22974029)
chr7 (3-97)||(3353390-3353484)
chr7 (3-116)||(22993416-22993530)
chr7 (2-119)||(45960051-45960168)
chr7 (5-113)||(24969377-24969484)
chr7 (1-112)||(42032046-42032158)
chr7 (3-118)||(42210311-42210427)
chr7 (1-119)||(14650260-14650379)
chr7 (1-116)||(22573759-22573874)
chr7 (3-117)||(26423336-26423451)
chr7 (1-112)||(29805487-29805598)
chr7 (7-116)||(1605887-1605997)
chr7 (1-116)||(5039465-5039581)
chr7 (1-119)||(39420781-39420899)
chr7 (1-118)||(365084-365202)
chr7 (5-114)||(20247221-20247330)
chr7 (3-119)||(8734735-8734852)
chr7 (3-106)||(14535247-14535351)
chr7 (1-113)||(36619301-36619414)
chr7 (1-81)||(38578914-38578995)
chr7 (31-110)||(9685691-9685771)
chr7 (1-116)||(27028225-27028341)
chr7 (6-113)||(29151889-29151997)
chr7 (3-113)||(5069864-5069975)
chr7 (12-117)||(23823894-23824000)
chr7 (3-116)||(37514867-37514981)
chr7 (3-87)||(21190829-21190914)
chr7 (6-117)||(45447915-45448027)
chr7 (6-113)||(11607080-11607187)
chr7 (3-50)||(41945486-41945533)
chr7 (1-48)||(45697237-45697284)
chr7 (3-117)||(46414620-46414735)
chr7 (64-109)||(24407110-24407155)
chr7 (52-116)||(34127719-34127783)
[»] chr8 (43 HSPs)
chr8 (1-120)||(14846519-14846638)
chr8 (1-118)||(8141047-8141165)
chr8 (1-117)||(6100418-6100535)
chr8 (1-116)||(9860042-9860159)
chr8 (3-116)||(15884605-15884718)
chr8 (3-118)||(14666120-14666236)
chr8 (3-117)||(13085470-13085585)
chr8 (3-116)||(38922463-38922577)
chr8 (1-113)||(4479343-4479455)
chr8 (1-116)||(45521116-45521231)
chr8 (1-118)||(1013024-1013142)
chr8 (13-119)||(22810024-22810130)
chr8 (1-116)||(2467165-2467281)
chr8 (1-116)||(3418560-3418676)
chr8 (1-119)||(10927550-10927669)
chr8 (3-117)||(44893327-44893442)
chr8 (3-116)||(17845680-17845792)
chr8 (1-117)||(43027251-43027368)
chr8 (1-112)||(18373961-18374073)
chr8 (3-118)||(34846759-34846874)
chr8 (3-116)||(13358969-13359083)
chr8 (3-112)||(17981392-17981502)
chr8 (6-111)||(43032853-43032959)
chr8 (1-117)||(583760-583875)
chr8 (1-117)||(33401846-33401963)
chr8 (1-116)||(10535451-10535566)
chr8 (7-117)||(34613831-34613942)
chr8 (7-116)||(24837189-24837299)
chr8 (5-117)||(29933719-29933831)
chr8 (1-117)||(11785863-11785978)
chr8 (14-116)||(6940505-6940608)
chr8 (3-117)||(7673706-7673817)
chr8 (1-117)||(33935782-33935899)
chr8 (1-116)||(8997591-8997707)
chr8 (55-117)||(24938664-24938726)
chr8 (1-116)||(26570871-26570987)
chr8 (1-40)||(8586986-8587025)
chr8 (57-116)||(9395922-9395981)
chr8 (1-61)||(9408348-9408410)
chr8 (2-87)||(2209759-2209845)
chr8 (3-117)||(18091347-18091461)
chr8 (6-116)||(30903283-30903393)
chr8 (1-61)||(6042823-6042884)
[»] scaffold0170 (1 HSPs)
scaffold0170 (3-116)||(9791-9905)
[»] scaffold0002 (3 HSPs)
scaffold0002 (1-99)||(319385-319484)
scaffold0002 (5-116)||(516-628)
scaffold0002 (19-117)||(412091-412190)
[»] scaffold0005 (3 HSPs)
scaffold0005 (3-116)||(271123-271237)
scaffold0005 (3-118)||(249354-249475)
scaffold0005 (72-116)||(250132-250176)
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-118)||(5917-6034)
[»] scaffold0209 (1 HSPs)
scaffold0209 (1-117)||(12520-12635)
[»] scaffold0079 (1 HSPs)
scaffold0079 (6-86)||(8151-8231)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-116)||(8748-8873)
[»] scaffold0029 (1 HSPs)
scaffold0029 (3-116)||(40990-41104)
[»] scaffold0010 (2 HSPs)
scaffold0010 (4-118)||(25834-25949)
scaffold0010 (3-40)||(155760-155797)
[»] scaffold0341 (1 HSPs)
scaffold0341 (3-99)||(18595-18692)
[»] scaffold0006 (1 HSPs)
scaffold0006 (3-116)||(68463-68574)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-115)||(1661-1776)
[»] scaffold0376 (1 HSPs)
scaffold0376 (3-116)||(12616-12730)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-110)||(95028-95136)
scaffold0004 (2-79)||(7883-7961)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-113)||(186467-186577)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-99)||(42879-42978)
scaffold0009 (20-118)||(9380-9479)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-61)||(6856-6917)
[»] scaffold0332 (1 HSPs)
scaffold0332 (35-119)||(15274-15358)
[»] scaffold0086 (1 HSPs)
scaffold0086 (3-118)||(26127-26243)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-41)||(65199-65239)
[»] scaffold0050 (1 HSPs)
scaffold0050 (9-87)||(72608-72686)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-50)||(25098-25147)


Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 11687161 - 11687408
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||  ||||||||||| |||    
T  11687161 cgtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactggagccc 11687260  T
Q  104 aaacaacttggttaaagaaccataactttaaacttgaacttttttgttgagagaaagatctataagtttaaatttgaatataatgagagttaaactcagc 203  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11687261 aaacaacttggttaaagaaccataactttaaacttgaac--ttttgttgagagaaagatctataaatttaaatttgaatataatgagagttaaactcagc 11687358  T
Q  204 -tatacaacataaaaacaaagtaatctttacatgtataacaaaatatccc 252  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11687359 ttatacaacataaaaacaaagtaatctttacatgtataacaaaatatccc 11687408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35316015 - 35315898
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||||| || ||||| | |||| |||||||| | ||| ||||||||||||||||||||||||||||    
T  35316015 catgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctctttgccactgga 35315916  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  35315915 gcccaaacaacttggtta 35315898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 54261285 - 54261169
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||||| |||  ||||| | |||||||||| |||| ||| |||||||||||||||| |||||||||||    
T  54261285 catgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccaggtacgtccttggaaggagctccttgccactgga 54261186  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  54261185 gcccaaacaacttggtt 54261169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 10040613 - 10040498
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||| || | ||| ||||| |||||||||| ||||||||||| ||    
T  10040613 tgcgtagaggcatgcgcactggccaagcgttgttcccctgagaatcgaacccgatattccccgggtacgtccttagaaggagctccttgccactggagcc 10040514  T
Q  103 caaacaacttggttaa 118  Q
    ||| ||||||||||||    
T  10040513 caagcaacttggttaa 10040498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 25295019 - 25294901
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| ||||||||||||||||||||||  |||||| |||| ||||||||| |||||||||| || ||||| |||||||||||||||| |||||||||||    
T  25295019 catgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactgga 25294920  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||| ||||||||||||    
T  25294919 gcccaagcaacttggttaa 25294901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6462471 - 6462358
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| |||||||| ||||| ||||| | |||||||||| |||||||| |||||||||||||||| |||||||| ||    
T  6462471 catgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgtccttggaaggagctccttgccactaga 6462372  T
Q  100 tcccaaacaacttg 113  Q
     ||||| |||||||    
T  6462371 gcccaagcaacttg 6462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 10855441 - 10855324
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||| ||||||||| ||||||||||| ||  |||||| |||||||||  |||  |||||||||||||||||||| ||||||||||| |    
T  10855441 tgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaaggagctccttgccactggagc 10855342  T
Q  102 ccaaacaacttggttaaa 119  Q
    ||||||||||||||||||    
T  10855341 ccaaacaacttggttaaa 10855324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 48342079 - 48341960
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||| ||||| |||||||||||  || |||  | |||||||||| |||| ||| |||||||||||||||| |||||||||||    
T  48342079 catgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaacccggtattccccaggtacgtccttggaaggagctccttgccactgga 48341980  T
Q  100 tcccaaacaacttggttaaa 119  Q
     |||||||||||||||||||    
T  48341979 gcccaaacaacttggttaaa 48341960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26207849 - 26207967
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||| |||||| ||| ||||||||||| || ||||| | |||||||||| || | |||||||||||||||||||| |||||||||||    
T  26207849 catgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactgga 26207948  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||| ||||||||||||    
T  26207949 gcccaagcaacttggttaa 26207967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 51060329 - 51060446
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||| ||||  |||||||||| |||||||| | |||| ||||| || |||| |||||||||||||||| ||||||||||||    
T  51060329 catgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaacccgatattccccggatagatccttggaaggagctatttgccactgga 51060428  T
Q  100 tcccaaacaacttggtta 117  Q
      ||||||||||||||||    
T  51060429 gtccaaacaacttggtta 51060446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 33251721 - 33251605
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||| ||||||||||||||||||||| | | ||||| | |||||||||| ||  |||| |||||||||||||||| ||||||| |||    
T  33251721 catgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcccctaatacgtccttggaaggagctcattgccaccgga 33251622  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  33251621 gcccaaacaacttggtt 33251605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 47471890 - 47471775
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||| ||||||||||| ||||| | ||||||||||| ||||| | |||||||||| | || ||| ||||||||||||||||||||||||| ||     
T  47471890 catgcgtagaagcatgcgcactagccaagcattgttcccctgggaatcgaacccggtattccctaggtacgtccttggaaggagctctttgccactagag 47471791  T
Q  101 cccaaacaacttggtt 116  Q
    ||||| ||||||||||    
T  47471790 cccaagcaacttggtt 47471775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29127978 - 29127861
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||| ||||  ||||||| |||||  |||| | |||| ||||| |||||||| |||||||||||| ||| |||||||||||    
T  29127978 catgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaacccgatattccccagatacgtccttggaaggatctccttgccactgga 29127879  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  29127878 gcccaaacaacttggtta 29127861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 35923677 - 35923786
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttcccctga-gaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaa 105  Q
    ||||||||||||||||||||||||||||||||||  | ||||| | || |||||||||||| ||| ||||||||| |||||| |||||||| || |||||    
T  35923677 tagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctggtattctccaggtacgtccttggaatgagctcattgccactagagcccaa 35923776  T
Q  106 acaacttggt 115  Q
    ||||||||||    
T  35923777 acaacttggt 35923786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45877513 - 45877396
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||| |||||||||||  |||||| ||||||  |||| | |||||||||| || ||||| ||||||||||| |||| |||||||||||    
T  45877513 catgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtccttggaaggggctccttgccactgga 45877414  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  45877413 gcccaaacaacttggtta 45877396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29762203 - 29762319
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| ||||||||||||||||||||||  |||||| ||||||||||||   |||| ||||| ||  ||||||||||||||||||||| |||||||||||    
T  29762203 catgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggacccgatattccccgaatacatccttggaaggagctccttgccactgga 29762302  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  29762303 gcccaagcaacttggtt 29762319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 47749155 - 47749268
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    ||||||||||||||||||||||||||  |||||||||||  ||||| | |||||||||| |  ||||| |||||||||| ||||| || |||||||| ||    
T  47749155 tgcgtagaggcatgcgcactggccaagagttgttcccctaggaatcgaacccggtattccctggatacgtccttggaagaagctcattaccactggagcc 47749254  T
Q  103 caaacaacttggtt 116  Q
    ||||||| ||||||    
T  47749255 caaacaatttggtt 47749268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 13893980 - 13893868
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||||||||||||| || |||| ||||||||||| ||  |||| | |||||||||| || || || |||||||||||||||| ||||||||||| ||||    
T  13893980 gtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaacccggtattccccggacacgtccttggaaggagctccttgccactggagccca 13893881  T
Q  105 aacaacttggtta 117  Q
    |||||||||||||    
T  13893880 aacaacttggtta 13893868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 29135972 - 29135856
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||||| || ||||| |  ||||||||| || ||||| |||||||||| ||||| |||||||||||    
T  29135972 catgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccggatacgtccttggaagaagctccttgccactgga 29135873  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||| ||||||    
T  29135872 gcccaagcaatttggtt 29135856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 42412822 - 42412938
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||| ||||| ||||| |||||||||||  | ||||| | |||||||||| || ||||| |||||||||||||||| |||||| ||||    
T  42412822 catgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccattgga 42412921  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  42412922 gcccaagcaacttggtt 42412938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 51683009 - 51683121
Alignment:
Q  8 agaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaa 106  Q
    ||||||||||||||||| ||| ||||||||||| || ||||| | || ||||||| || ||||| || ||||||||||||| | ||||||||| ||||||    
T  51683009 agaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattccccggatacgtctttggaaggagctcctcgccactggagcccaaa 51683108  T
Q  107 caacttggttaaa 119  Q
    |||||||||||||    
T  51683109 caacttggttaaa 51683121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 46529924 - 46530034
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaa 105  Q
    ||||||||||| ||||||| || | ||||| || ||||||||| | |||||||||| |||| ||| |||||| ||||||||| ||||||||||| |||||    
T  46529924 tagaggcatgcacactggcgaagcattgtttcctctgagaatcgaacccggtattccccaggtacgtccttgaaaggagctccttgccactggagcccaa 46530023  T
Q  106 acaacttggtt 116  Q
    |||||||||||    
T  46530024 acaacttggtt 46530034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 49543576 - 49543462
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||| | |||| ||||| |  ||||| |||||||||||||||| ||||||||  | |    
T  49543576 tgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaacccgatattcccgggatacgtccttggaaggagctccttgccactaaagc 49543477  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||| ||||||    
T  49543476 ccaaacaaattggtt 49543462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41630560 - 41630677
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||| ||||||||||||||||||| ||| |||||||||||| | ||||  | ||||||||| ||| | ||| ||| |||||||||||| ||| |||||||    
T  41630560 catgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaacccggtattttccggttacgtccatggaaggagctccttgtcactgga 41630659  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  41630660 gcccaaacaacttggtta 41630677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 49198410 - 49198293
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||| |||||  ||||| | |||||||||| || ||||  |||||||||| | ||| ||| |||||||    
T  49198410 catgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccggatatgtccttggaagaaactccttgtcactgga 49198311  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  49198310 gcccaaacaacttggtta 49198293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3755629 - 3755513
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||| |||||||||||| ||||||||||||| |||| ||||| |   |||||||| || ||||| |||||| || ||||||||||||||||||    
T  3755629 catgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtccttgaaaagagctctttgccactgga 3755530  T
Q  100 tcccaaacaacttggtt 116  Q
      |||| ||||||||||    
T  3755529 gtccaagcaacttggtt 3755513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28242337 - 28242221
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| |||||||||| ||||||||||||| ||||||| ||||  |||| | ||||||||||||| ||||| || |||||||||||||||| |||| |||    
T  28242337 catgcatagaggcatgtgcactggccaaacattgttcctcctggcaatctaacccggtattctccggatacgtcattggaaggagctctttaccaccgga 28242238  T
Q  100 tcccaaacaacttggtt 116  Q
     | ||| ||||||||||    
T  28242237 gctcaagcaacttggtt 28242221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 30767297 - 30767413
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| ||||||||||  |||||||||| ||  |||| | |||| ||||| |||| |||||||||||||||| ||| ||||||||||| |    
T  30767297 tgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatattccccaggtacatccttggaaggaactccttgccactggagc 30767396  T
Q  102 ccaaacaacttggttaa 118  Q
    |||| |||||| |||||    
T  30767397 ccaagcaacttagttaa 30767413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 3136742 - 3136853
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||||||||||| ||||  ||||||||||||| |||| |  ||||||||| || | ||| |||||| ||||||||  ||||||| |||     
T  3136742 catgcgtagaggcatgcgcactgcccaagtgttgttcccctgaaaatcgaatccggtattccccgggtacgtccttgaaaggagcttcttgccacgggag 3136841  T
Q  101 cccaaacaactt 112  Q
    ||||||||||||    
T  3136842 cccaaacaactt 3136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 15320243 - 15320129
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| |||||||||| | ||||||| |||   |||| | |||||||||| || | ||| |||||||||||||||| |||||||||||      
T  15320243 tgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagt 15320144  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  15320143 ccaaacaacttggtt 15320129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 45450496 - 45450608
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||||||||||| ||| | |||||||||||  |||||| ||| ||||||| | ||||| | ||||||| |||||| ||||||||||| |    
T  45450496 atgcgtagaggcatgcgcactggtcaagcattgttcccctggaaatcaaacccagtattctacggatacgt-cttggaatgagctc-ttgccactggagc 45450593  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  45450594 ccaagcaacttggtt 45450608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 55069729 - 55069846
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| ||||||||||||||||||||||  |  ||||||| ||| |||||| |   |||| |||||| || |||||| ||| ||||||| |    
T  55069729 tgcgtagaggcatgtgcactggccaaacgttgttccctataggaatcaaacccagtattccctgaatacgtccttgaaaagagctcattgtcactggagc 55069828  T
Q  102 ccaaacaacttggttaaa 119  Q
    ||||||||||||||||||    
T  55069829 ccaaacaacttggttaaa 55069846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 15795544 - 15795628
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||| | | |||||||| || | ||| ||||||||||||||||    
T  15795544 tgcgtagaggcatgcgcactgaccaagcgttgttcccctgggaatcgaactcggtattccccgggtacgtccttggaaggagctc 15795628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 39849130 - 39849015
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccaga-tacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||| |||||||||| ||||||||| ||| ||||| | ||||  |||| || || ||| |||||||||||||||| |||||||||||    
T  39849130 catgcgtagaggcatgcacactggccaagcgttgttcctctgggaatcgaacccgaaattc-cctgagtacgtccttggaaggagctccttgccactgga 39849032  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| | ||||||||    
T  39849031 gcccaagcgacttggtt 39849015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 31072935 - 31072824
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| |||||| |||| ||||||||||| ||  |||| | || |||||||||| | ||| |||||| ||||||||| |||||| |||| |    
T  31072935 tgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattctccgggtacgtccttgaaaggagctccttgccattggagc 31072836  T
Q  102 ccaaacaacttg 113  Q
    ||||||||||||    
T  31072835 ccaaacaacttg 31072824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 33560882 - 33560808
Alignment:
Q  37 cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaact 111  Q
    |||||| | ||||| |||||||||| |||| |||||||||||||||||||| ||||||||| | |||||||||||    
T  33560882 cccctggggatcaaacccggtattccccaggtacatccttggaaggagctccttgccactgaagcccaaacaact 33560808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 49082878 - 49082772
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||| |||||||||||||| || |||||||| ||||| ||||| | | |||||||| || ||||| ||||| ||||||||||  |||||||||| ||||    
T  49082878 gtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaaggagctccctgccactggagccca 49082779  T
Q  105 aacaact 111  Q
    |||||||    
T  49082778 aacaact 49082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 3763107 - 3762994
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    ||||||||| ||||| ||||| |||| ||||||||| ||| ||||| |  ||||||||  || ||||| |||||| ||||||||||||| |||| || |     
T  3763107 tgcgtagagacatgcacactgaccaagcgttgttcctctgtgaatcgaatccggtatttcccggatacgtccttgaaaggagctctttgtcactagagct 3763008  T
Q  103 caaacaacttggtt 116  Q
    ||||||||||||||    
T  3763007 caaacaacttggtt 3762994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 7310753 - 7310869
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| ||| || |||  ||||||||| ||| ||||| | ||||||||||  ||| ||| | |||||||||||||| ||||||| ||| |    
T  7310753 tgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaacccggtattcctcaggtacgttcttggaaggagctcattgccaccggagc 7310852  T
Q  102 ccaaacaacttggttaa 118  Q
    |||| ||||||||||||    
T  7310853 ccaatcaacttggttaa 7310869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 30045878 - 30045762
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| |||||||||||||||| ||||||| |||||  ||||| | |||||||||| |||  ||| | |||  ||||||||| |||||||| || |    
T  30045878 tgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtattccccatgtacgttcttaaaaggagctcattgccacttgagc 30045779  T
Q  102 ccaaacaacttggttaa 118  Q
    |||| ||||||||||||    
T  30045778 ccaagcaacttggttaa 30045762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 32873601 - 32873712
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    |||||||||||| ||||||| ||| |||||||| ||||  ||||| | || ||||||| || | ||| ||||||||| |||||| ||||||||||| |||    
T  32873601 cgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattc-ccgggtacgtccttggaatgagctccttgccactggagccc 32873699  T
Q  104 aaacaacttggtt 116  Q
    |||||||||||||    
T  32873700 aaacaacttggtt 32873712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 47219203 - 47219091
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||| ||||| ||||| ||||| || ||||| | || ||||||| || ||||| ||||||||| |||||| || |||||| |    
T  47219203 catgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaacctggtattccccggatacgtccttggaaagagctcattaccactgaa 47219104  T
Q  100 tcccaaacaactt 112  Q
      |||||||||||    
T  47219103 atccaaacaactt 47219091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 7612987 - 7613090
Alignment:
Q  14 atgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaactt 112  Q
    ||||||||| ||||| ||||||||||| || ||||| | |||||||||| |||  ||| |||||||||||||||| ||||||||| |  ||||||| |||    
T  7612987 atgcgcactagccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactgaagtccaaacagctt 7613086  T
Q  113 ggtt 116  Q
    ||||    
T  7613087 ggtt 7613090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 53649786 - 53649699
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    ||||||||||| || |||||||||||||  ||||||| ||||||||||| | |||||||||| ||  |||| ||||||||||||||||    
T  53649786 catgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaacccggtattccccgaatacgtccttggaaggagctc 53649699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 7650284 - 7650170
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| ||| || |||||||||  |||||||||| ||  |||| | |||||||||| | |  |||||||||| ||||| ||| ||||||||||| |    
T  7650284 tgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaacccggtattccctaagtacatccttgaaaggaactccttgccactggaac 7650185  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  7650184 ccaaacaacttggtt 7650170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 24146417 - 24146494
Alignment:
Q  41 tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggttaa 118  Q
    |||||||||| |||| ||||| |||||||  |||||||||||||||| ||| ||||| |  |||||||||||||||||    
T  24146417 tgagaatcaaacccgatattccccagatatgtccttggaaggagctccttgtcactgaaatccaaacaacttggttaa 24146494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 40944942 - 40944825
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||  |||||  ||  |||||||||| || ||||| | | ||||||||||  ||||| |||||||||||||||  ||||||| |||    
T  40944942 catgcgtagaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattctctggatacgtccttggaaggagcttcttgccaccgga 40944843  T
Q  100 tcccaaacaacttggtta 117  Q
     ||||| |||||||||||    
T  40944842 gcccaagcaacttggtta 40944825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 41219649 - 41219537
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||| | |  ||||||| ||  |||| ||||| |||||||||| |||| || ||| |    
T  41219649 tgcgcagaggcatacgcactggccaaacgttgttcctcctgagaatcgaacttggtattc-ccgtatacgtccttagaaggagctcattgcaacgggagc 41219551  T
Q  102 ccaaacaacttggt 115  Q
    |||| |||||||||    
T  41219550 ccaagcaacttggt 41219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7328902 - 7328787
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||| |||||||||||||||||||  |||||||||| || ||||| | |||||||||  || | ||| |||||||||||| ||| |||||||| ||    
T  7328902 catgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatttcccgggtacgtccttggaaggaactccttgccactaga 7328804  T
Q  100 tcccaaacaacttggtt 116  Q
     | ||| ||||||||||    
T  7328803 gcacaagcaacttggtt 7328787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 37092565 - 37092669
Alignment:
Q  13 catgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaact 111  Q
    |||||||||||||||||||||||||||| ||  |||| |  ||| |||||  | | ||| |||||||||| ||||| ||||||||||| ||||| |||||    
T  37092565 catgcgcactggccaaacgttgttccccttggaaatctaatccgatattccacgggtacgtccttggaagaagctccttgccactggagcccaagcaact 37092664  T
Q  112 tggtt 116  Q
    |||||    
T  37092665 tggtt 37092669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 928657 - 928542
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||| |||||||||||||| |||  |||||||||| |||||||| |  | ||||||| | || ||| ||||||||| |||||| |||||| | || |    
T  928657 tgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaatcgaatctggtattccctaggtacgtccttggaatgagctccttgccagttgagc 928558  T
Q  102 ccaaacaacttggtta 117  Q
    | ||||||||||||||    
T  928557 ctaaacaacttggtta 928542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 11025438 - 11025535
Alignment:
Q  18 gcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    |||||||||||  ||||| |||||  ||||| | || ||||||| |||||||| ||||||||||| |||| || |||||||| ||||| ||||||||||    
T  11025438 gcactggccaagtgttgtccccctcggaatcgaacctggtattccccagatacgtccttggaagg-gctccttaccactggagcccaagcaacttggtt 11025535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 19873420 - 19873316
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaa 105  Q
    ||||||||||||||||||||||| | ||||||| ||| ||||||| || ||||||| ||   ||| || |||||||||||    | |||||||| |||||    
T  19873420 gtagaggcatgcgcactggccaagcattgttcctctgggaatcaaacctggtattcccc--gtacgtcattggaaggagc----taccactggagcccaa 19873327  T
Q  106 acaacttggtt 116  Q
    |||||||||||    
T  19873326 acaacttggtt 19873316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 41223087 - 41223133
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatc 48  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  41223087 atgcgtagaggcatgcgcattggccaaacgttgtttccctgataatc 41223133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 52364850 - 52364935
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    |||||||||||||||||||||| ||| |||||||||  ||| ||||| | | |||||||| || | ||| ||||||||||||||||    
T  52364850 tgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattccccgggtacgtccttggaaggagctc 52364935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23511626 - 23511586
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct 41  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  23511626 catgcgtagaggcatgcgcactggtcaaacgttgctcccct 23511586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 26362017 - 26362131
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| ||||| |||||||||||||||| || ||||||| || | ||||| |  || || |||||||||||||||| ||| |||||||      
T  26362017 tgcgtagaggcatgcacactgaccaaacgttgttccccttgggaatcaaacctgatattc-ctcga-acgtccttggaaggagctcattgtcactggagt 26362114  T
Q  102 ccaaacaacttggttaa 118  Q
    ||||| || ||||||||    
T  26362115 ccaaagaatttggttaa 26362131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 47303537 - 47303649
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||| ||||||||||| |||||| ||||  |||||||| |||| ||||||| |||| |||| ||| ||||| |||||||||  ||||| || |||| |||    
T  47303537 catgtgtagaggcatgtgcactgaccaagtgttgttcctcctgggaatcaaacccgatattttccggatacgtccttggaaaaagctccttaccaccgga 47303636  T
Q  100 tcccaaacaactt 112  Q
     ||||| ||||||    
T  47303637 gcccaagcaactt 47303649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 3507583 - 3507642
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattc 61  Q
    ||||||||||||||||||||||||||  ||||||||| ||  ||||||| ||||||||||    
T  3507583 tgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaacccggtattc 3507642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 8164610 - 8164567
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaa 46  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||    
T  8164610 tgcgtaaaggcatgcgcactggccaagcgttgttccccttagaa 8164567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8362636 - 8362601
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt 36  Q
    |||||||||||||||||| |||||||||||||||||    
T  8362636 catgcgtagaggcatgcggactggccaaacgttgtt 8362601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26043871 - 26043812
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtat 59  Q
    ||||||||||||||||||||||||||||  ||||||| ||||| ||||| | ||||||||    
T  26043871 catgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaacccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 28572261 - 28572371
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||  ||||||||| ||||| |||||||| ||||| | ||| |||||| || | | | | |||| ||||||||| ||||||||||| |    
T  28572261 tgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaacccagtattccccgggtgcgttcttgaaaggagctccttgccactggagc 28572360  T
Q  102 ccaaacaactt 112  Q
     ||| ||||||    
T  28572361 acaagcaactt 28572371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 7648797 - 7648760
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  7648797 tgcgtagaggtatgcgcactggtcaaacgttgttcccc 7648760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40660375 - 40660412
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc 38  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  40660375 catgcgtagaggcatgcgcactgaccaaatgttgttcc 40660412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33689010 - 33688970
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct 41  Q
    ||||||||||||||||||||||||||||  ||| |||||||    
T  33689010 catgcgtagaggcatgcgcactggccaagtgttattcccct 33688970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 47312947 - 47313059
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||||||| |||||||||| |||||||| |||||||||||| ||| |||||||||||     
T  47312947 catgcgtagaggcatacgcactggccaaacgttgttcccctaggaatcaaacccggtattccccagatacgtccttggaaggatctcgttgccactggag 47313046  T
Q  101 cccaaacaacttg 113  Q
    |||||||||||||    
T  47313047 cccaaacaacttg 47313059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 11397937 - 11398052
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||| |||| ||||||||||||||||||||  ||||| | ||||||||||||| |||||||||||||||||||||| |||||||||||     
T  11397937 catgcgtagaggcatacgcattggccaaacgttgttcccctcggaatcgaacccggtattctccggatacatccttggaaggagctccttgccactggag 11398036  T
Q  101 cccaaacaacttggtt 116  Q
    ||||| ||||||||||    
T  11398037 cccaagcaacttggtt 11398052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5855582 - 5855464
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||||| | |||||||||| ||  |||| |||||||||||||||| |||||||||||    
T  5855582 catgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactgga 5855483  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||||||||||||||||    
T  5855482 gcccaaacaacttggttaa 5855464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 49078174 - 49078058
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||| |||||| ||||| | |||||||||| || ||||| ||||| |||||||||| |||||||||||    
T  49078174 catgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactgga 49078075  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  49078074 gcccaagcaacttggtt 49078058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 10336576 - 10336457
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||| |||| | |||| |||||||| ||||| || ||||||||||||| |||||||||||    
T  10336576 catgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccggatacgtctttggaaggagctccttgccactgga 10336477  T
Q  100 tcccaaacaacttggttaaa 119  Q
     |||| | ||||||||||||    
T  10336476 acccagataacttggttaaa 10336457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 41663904 - 41664019
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||| ||||  |||||||||| || ||||| | |||||||||| || ||||| ||||| |||||||||| |||||||||||    
T  41663904 catgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactgga 41664003  T
Q  100 tcccaaacaacttggt 115  Q
     |||||||||||||||    
T  41664004 gcccaaacaacttggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 12036794 - 12036908
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||| | |||||||||  || |||||| ||| |||||||| || ||| |||||||||||||||  ||||||| ||| |    
T  12036794 tgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaaacccagtattctctaggtacgtccttggaaggagcttcttgccaccggagc 12036893  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  12036894 ccaaacaacttggtt 12036908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33498887 - 33498992
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||| ||| |||||||||| | ||||||||| ||||| |||||||||  ||||| ||| |||||||||||    
T  33498887 catgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtattttccaggtacatccttaaaaggaactccttgccactgga 33498986  T
Q  100 tcccaa 105  Q
     |||||    
T  33498987 gcccaa 33498992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 18915925 - 18915809
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| ||||||||||  |||||||||| || ||||| | |||||||||| || | ||| |||||||||| ||||| ||||||||| | |    
T  18915925 tgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaagaagctccttgccactgaagc 18915826  T
Q  102 ccaaacaacttggttaa 118  Q
    |||||||||||||||||    
T  18915825 ccaaacaacttggttaa 18915809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 9853330 - 9853440
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    |||||||||||||||||||  |||||||||| |||||  ||||| | ||||||||| ||| | |||||||||||||||||||| ||||||||||| |||     
T  9853330 gtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaacccggtattttccgggtacatccttggaaggagctccttgccactggagccc- 9853428  T
Q  105 aacaacttggtt 116  Q
    ||||||||||||    
T  9853429 aacaacttggtt 9853440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 10422848 - 10422729
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaa-tcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||| |  |||| || | |||||||||| ||  |||| || ||||||||||||| ||||||||| |    
T  10422848 catgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccgaatacgtcattggaaggagctccttgccactgta 10422749  T
Q  100 tcccaaacaacttggttaaa 119  Q
     |||||||||||||||||||    
T  10422748 gcccaaacaacttggttaaa 10422729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 15466023 - 15465909
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| |||||| |||| ||||||||||| ||  |||| | || ||||||| ||| |||| |||||||||||||| ||||| ||||||| |    
T  15466023 tgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattccccaaatacgtccttggaaggagccctttgtcactggagc 15465924  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  15465923 ccaaacaacttggtt 15465909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17358519 - 17358637
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||| ||||||||||| ||| ||| |||||||| ||||||||||| | |||||||||| ||| |||| |||||| || |||||| |||||||| |     
T  17358519 catgcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaacccggtattccccaaatacgtccttgaaatgagctccttgccactagc 17358618  T
Q  100 tcccaaacaacttggttaa 118  Q
    |||||||||| ||||||||    
T  17358619 tcccaaacaaattggttaa 17358637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 33418169 - 33418279
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaa 105  Q
    |||||||||||||||||||||| |||||| ||||  || |||| |  |||||||||||| | ||| || ||||||||||||| ||||||||||| |||||    
T  33418169 tagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattctccgggtacgtctttggaaggagctccttgccactggagcccaa 33418268  T
Q  106 acaacttggtt 116  Q
    |||||||||||    
T  33418269 acaacttggtt 33418279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 18649404 - 18649517
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    |||||||||||||||||||| ||| ||||||||||| ||| |||| | |||| |||||||||||||| |||||||||||||||| || ||||| ||   |    
T  18649404 cgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccagatacgtccttggaaggagctcattaccactagagttc 18649503  T
Q  104 aaacaacttggtta 117  Q
    || |||||||||||    
T  18649504 aagcaacttggtta 18649517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 45361931 - 45362036
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||| |||||||||||||||||| ||||||||| |||||||||| | |||||||||| |  | ||| |||||||||||||||| ||||||||| |     
T  45361931 atgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaacccggtattcccagggtacgtccttggaaggagctccttgccactgaag 45362030  T
Q  101 cccaaa 106  Q
    ||||||    
T  45362031 cccaaa 45362036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 48798118 - 48798235
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||| | ||| ||||||||||| ||  |||| | |||| ||||| || ||||| || ||||||||||||| |||||||||||    
T  48798118 catgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagctccttgccactgga 48798217  T
Q  100 tcccaaacaacttggtta 117  Q
     ||| |||||||||||||    
T  48798218 gccccaacaacttggtta 48798235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 32931 - 32819
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||| |||||| |||| ||||||||| |||| |||||   |||| ||||| || | ||| |||||||||||||||| |||||||||||    
T  32931 catgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcggacccgatattcccccggtacgtccttggaaggagctcattgccactgga 32832  T
Q  100 tcccaaacaactt 112  Q
     ||||||||||||    
T  32831 gcccaaacaactt 32819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 2567331 - 2567223
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||||||||||||||||||||| |||||||  ||| || |||| | |||||||||||||  |||| |||||||||||||||| |||||| || | ||||    
T  2567331 gtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggtattctccgaatacgtccttggaaggagctccttgccagtgaagccca 2567232  T
Q  105 aacaacttg 113  Q
    |||||||||    
T  2567231 aacaacttg 2567223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 2980981 - 2981097
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| ||||||||||  ||||||||| ||| ||||| | ||| |||||| || ||||| ||| |||||||||||| |||||||| || |    
T  2980981 tgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagctccttgccactagagc 2981080  T
Q  102 ccaaacaacttggttaa 118  Q
    |||| ||||||||||||    
T  2981081 ccaagcaacttggttaa 2981097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30927775 - 30927894
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||| || ||||||| |||||||||| |||  |||| | |||| ||||  |||| ||| |||||||||||||||| |||||||||||    
T  30927775 catgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaacccgatatttcccaggtacgtccttggaaggagctccttgccactgga 30927874  T
Q  100 -tcccaaacaacttggttaa 118  Q
     ||| |||||||||||||||    
T  30927875 gtccaaaacaacttggttaa 30927894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 8764049 - 8763935
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||| | | |||| ||||| || | ||| |||||||||||||||| ||||||| ||| |    
T  8764049 tgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaacccgatattccccgggtacgtccttggaaggagctccttgccacgggagc 8763950  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  8763949 ccaagcaacttggtt 8763935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9659227 - 9659344
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||| ||||||||||||| | ||||||||||||||||| ||||| | |||||||||| ||   ||| ||||| ||| |||||| |||||||||||     
T  9659227 catgcgtaaaggcatgcgcactagtcaaacgttgttcccctgggaatcgaacccggtattccccgagtacgtccttagaatgagctccttgccactggag 9659326  T
Q  101 cccaaacaacttggttaa 118  Q
    || || |||||| |||||    
T  9659327 cctaagcaacttagttaa 9659344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10173019 - 10173132
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||| ||||||||||| ||||||||    || ||||  |  ||||||||| |||||||| |||||||||||||| | |||||||||||    
T  10173019 catgcgtagaggcatgggcactggccaagcgttgttctttatgggaattgaatccggtattccccagatacgtccttggaaggagcaccttgccactgga 10173118  T
Q  100 tcccaaacaacttg 113  Q
     |||||||||||||    
T  10173119 gcccaaacaacttg 10173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5504091 - 5503975
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||| |||||   ||| |||||||  ||||||||||| | || | ||||| |||||||| | || ||||||||||| |||||||||||    
T  5504091 catgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaacctgatattccccagatacgttctcggaaggagctccttgccactgga 5503992  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  5503991 acccaaacaacttggtt 5503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 8905211 - 8905315
Alignment:
Q  13 catgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaactt 112  Q
    |||||||||||||||| ||||||||||||   ||||   |||| |||||||| ||||| || ||||||||||||| |||||||| ||  |||||||||||    
T  8905211 catgcgcactggccaagcgttgttccccttgaaatcgtacccgatattctccggatacgtcattggaaggagctccttgccactagagtccaaacaactt 8905310  T
Q  113 ggtta 117  Q
    |||||    
T  8905311 ggtta 8905315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 16956524 - 16956432
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgcca 94  Q
    |||||||||||||||||||||| ||||||||||| |||||||||| | | | |||||||| || | ||| |||||||||||||||| ||||||    
T  16956524 tgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaaccgaacacggtattccccgggtacgtccttggaaggagctccttgcca 16956432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26325872 - 26325756
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||| ||||  ||||||||| ||| ||||| | |||| |||||  | ||||| |||||| ||||||||| |||||||||||    
T  26325872 catgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaacccgatattcctcggatacgtccttgaaaggagctccttgccactgga 26325773  T
Q  100 tcccaaacaacttggtt 116  Q
     ||| | ||||||||||    
T  26325772 gccctagcaacttggtt 26325756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31576595 - 31576711
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||  |||| ||||||| | ||||| |||||||||||| | ||||||||| ||  ||||| ||||| ||| |||||| |||||||| ||    
T  31576595 catgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaacccggtattttcgggatacgtccttagaatgagctccttgccactaga 31576694  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  31576695 gcccaaacaacttggtt 31576711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 28417004 - 28416889
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctc-tttgccactggat 100  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||  ||||||||  ||| |||| |||||| || ||| || ||||||||| ||     
T  28417004 tgcgtagatgcatgcgccctggccaaacgttgttccctctgagaatcaaatccggtatttcccatatacgtccttgaaatgagttcatttgccactagaa 28416905  T
Q  101 cccaaacaacttggtt 116  Q
     |||||||||||||||    
T  28416904 tccaaacaacttggtt 28416889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 34878045 - 34877934
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    |||||||||||||||||||||||  |||||||| |||  ||||| | || ||||||| ||  |||| ||||||||||| |||| ||||||||| | ||||    
T  34878045 gtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctccttgccactgaagccca 34877946  T
Q  105 aacaacttggtt 116  Q
    ||||||||||||    
T  34877945 aacaacttggtt 34877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 15238156 - 15238270
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| || ||||||| ||||| ||||| || ||||| | |||| ||||| | || ||| |||||||||||||||| |||||| |||| |    
T  15238156 tgcgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaacccgatattccctaggtacgtccttggaaggagctccttgccattggagc 15238255  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  15238256 ccaagcaacttggtt 15238270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 17642054 - 17642168
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||||||||||||||  |||||||||| || ||||| | ||| |||||  |  | ||| ||| |||||||||||| ||| ||||||| |    
T  17642054 tgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagc 17642153  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  17642154 ccaaacaacttggtt 17642168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 43959871 - 43959981
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||  | |||| ||||| || | ||| || ||||||||||| | ||||||||||| |    
T  43959871 tgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaacccgatattccccgggtacgtcattggaaggagcaccttgccactggagc 43959970  T
Q  102 ccaaacaactt 112  Q
    |||| ||||||    
T  43959971 ccaatcaactt 43959981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 50371884 - 50371998
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||| ||||||| ||||||||| ||||||||  ||||| |||| | | || |||| | ||||||||||||| |||||||||| |||||||| || |    
T  50371884 tgcgtagaagcatgcgtactggccaagcgttgttcttcctgaaaatcgaacacgctatttttcagatacatccttagaaggagctccttgccacttgagc 50371983  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||| ||||||    
T  50371984 ccaaacaatttggtt 50371998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 6563499 - 6563402
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||| |||| ||||||||||| |||||||||||  || |||| | |||||| |||| | | |||||||||||||||||||| |||||||||||    
T  6563499 tgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctccttgccactgga 6563402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 25165454 - 25165346
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaa 106  Q
    |||||||||||||||||||  |  ||||||||||||| |||| |  ||||||||| |||| ||| || ||||||||||||| |||||||| || |||||     
T  25165454 tagaggcatgcgcactggcagagtgttgttcccctgataatcgaatccggtattccccaggtacgtc-ttggaaggagctccttgccactagagcccaag 25165356  T
Q  107 caacttggtt 116  Q
    ||||||||||    
T  25165355 caacttggtt 25165346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32142894 - 32143010
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||| |||||||||||||||||||  |||||| ||||||| |||| | |||||||||| |  | ||| ||||||||| |||||||||||||||| |    
T  32142894 catgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccggtattc-cagggtacgtccttggaatgagctctttgccactgaa 32142992  T
Q  100 tcccaaacaacttggtta 117  Q
      ||||||||||| ||||    
T  32142993 gtccaaacaactttgtta 32143010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 34719834 - 34719717
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||| ||| |||| |||||  || ||||| | ||| |||||| |||| ||| |||||||||||||||| |||||| | || |    
T  34719834 tgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcgaacccagtattccccaggtacgtccttggaaggagctccttgccattagagc 34719735  T
Q  102 ccaaacaacttggttaaa 119  Q
    | | ||||||||||||||    
T  34719734 caacacaacttggttaaa 34719717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 40288530 - 40288642
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||||||||||  ||||||||| ||||||||||| ||  |||| | |||||||||| ||  |||| ||||||||| |||||| |||||||| || ||||    
T  40288530 gtagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccggtattccccgaatacgtccttggaaagagctccttgccactcgagccca 40288629  T
Q  105 aacaacttggtta 117  Q
    | |||||||||||    
T  40288630 agcaacttggtta 40288642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 18808316 - 18808209
Alignment:
Q  10 aggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaaca 108  Q
    ||||||||||||||| ||| |||||||||| ||||||||  | || | |||||   |||||| |||||||||| | ||| ||||||||||| ||||||||    
T  18808316 aggcatgcgcactggtcaagcgttgttccctctgagaattgaacctgttattccttagatacgtccttggaagaaactcattgccactggagcccaaaca 18808217  T
Q  109 acttggtt 116  Q
    ||||||||    
T  18808216 acttggtt 18808209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 31152771 - 31152660
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttcccctgagaa-tcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||||||| |||||||| |||| |||| |||||| | ||| || | |||||||||| |  | ||||||||||||| |||||| |||||||| || ||||    
T  31152771 gtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattccctgggtacatccttggaaagagctccttgccactagagccca 31152672  T
Q  105 aacaacttggtt 116  Q
    ||||||||||||    
T  31152671 aacaacttggtt 31152660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 33004065 - 33004180
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||| | ||| ||||||||  |||| |  ||| ||||| || ||||| |||||||||||||||| |   ||||||| |    
T  33004065 tgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccggatacgtccttggaaggagctcctcatcactggagc 33004164  T
Q  102 ccaaacaacttggtta 117  Q
    |||| |||||||||||    
T  33004165 ccaagcaacttggtta 33004180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 45726481 - 45726596
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||| ||| ||||||||||||| ||| |||| |||||||||| | || |||||||  | | ||| |||||||| |||| ||||||| ||||||    
T  45726481 catgcgtagagacatacgcactggccaaatgttattcctcctgagaatcgaaccaggtattcctcgggtacgtccttggagggaggtctttgcaactgga 45726580  T
Q  100 tcccaaacaacttggt 115  Q
     ||||| |||||||||    
T  45726581 gcccaagcaacttggt 45726596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 34334353 - 34334439
Alignment:
Q  11 ggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccact 96  Q
    ||||||||||||||||||  |||||| |||||| ||||| | |||||||||| || ||||| ||||||||| |||||| ||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccact 34334439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 45536766 - 45536653
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| ||||||||||| |||||||||||| || |||| | ||||||||||||| | ||| || |||||| ||| || | |||||| || |    
T  45536766 tgcgtagaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtattctccgggtacgtcattggaa-gagttcctcgccactagagc 45536668  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  45536667 ccaagcaacttggtt 45536653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 50503411 - 50503525
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||| |||  |||||| |||||| ||||| | |||| ||||| || ||||| |||||| ||||||||| | |||||| ||      
T  50503411 tgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattccccggatacgtccttgaaaggagctcctcgccactagagt 50503510  T
Q  102 ccaaacaacttggtt 116  Q
    ||| |||||||||||    
T  50503511 ccatacaacttggtt 50503525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26660198 - 26660081
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||| ||||  |||| |||||||||| ||  |||| | |||||||||| ||  |||| || || |||| | |||||||||||||||    
T  26660198 catgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtattccccgaatacgtcattcgaagaaactctttgccactgga 26660099  T
Q  100 tcccaaacaacttggtta 117  Q
     ||||| |||||||||||    
T  26660098 gcccaagcaacttggtta 26660081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32150970 - 32151087
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||| |||||||||||||| ||||| |||||||||| ||  |||| | || | |||||  |  | || |||||||||||||||| |||||||||||    
T  32150970 catgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaacctgatattcctcgaaaacgtccttggaaggagctccttgccactgga 32151069  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||| ||||    
T  32151070 gcccaaacaactttgtta 32151087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 16263604 - 16263528
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttg 77  Q
    ||||||||||||||||||||||||||| ||||||||| ||||  |||| | || ||||||| |||||||| ||||||    
T  16263604 atgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaacctggtattccccagatacgtccttg 16263528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 17988708 - 17988824
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||||| ||||||||||||||| | ||||| |||||| |||||| || ||||||| |  | ||| ||||| |||||||||| ||| |||| ||     
T  17988708 catgcgtagaggtatgcgcactggccaagcattgtttccctgaaaatcaaacctggtattcccggggtacgtccttagaaggagctcattggcactagag 17988807  T
Q  101 cccaaacaacttggtta 117  Q
     |||| ||| |||||||    
T  17988808 tccaagcaatttggtta 17988824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 37339878 - 37339795
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgt--tcccctgagaatcaaccccggtattctccagatacatccttggaaggag 84  Q
    ||||| |||||||||||||||||||| ||||||   |||||| ||||| | |||||||||| || | |||||||||||||||||    
T  37339878 tgcgttgaggcatgcgcactggccaagcgttgtccccccctgggaatcgaacccggtattccccgggtacatccttggaaggag 37339795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 51437517 - 51437413
Alignment:
Q  13 catgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaact 111  Q
    |||||||||||| ||| ||||||||||| || ||||| | |||| |||||  | ||||| |||||| ||||||||| ||| ||||| | |||||||||||    
T  51437517 catgcgcactggtcaagcgttgttccccatgggaatcgaacccgatattcctcggatacgtccttgaaaggagctcattgtcactgaagcccaaacaact 51437418  T
Q  112 tggtt 116  Q
    |||||    
T  51437417 tggtt 51437413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 19195426 - 19195391
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  19195426 catgcgtagaggcatgcgcactggccaaacgttgtt 19195391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 31734344 - 31734237
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    |||||||||||||||||||||||| ||||||| |||  |||||| |  || ||||||  | | ||||||||||||||| |||| |||| |||| | ||||    
T  31734344 cgtagaggcatgcgcactggccaatcgttgtttcccctagaatcgaatccagtattcctcgggtacatccttggaaggtgctccttgctactgaagccca 31734245  T
Q  105 aacaactt 112  Q
    | ||||||    
T  31734244 agcaactt 31734237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 46929794 - 46929901
Alignment:
Q  9 gaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaaca 108  Q
    |||||||||||| ||||||| ||||||||   ||  |||| | | || |||||||||||||| || ||||||||||||  |||||||| || ||||| ||    
T  46929794 gaggcatgcgcattggccaagcgttgttcttttggaaatcgaactcgatattctccagatacgtctttggaaggagcttcttgccactagagcccaagca 46929893  T
Q  109 acttggtt 116  Q
    ||||||||    
T  46929894 acttggtt 46929901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 5063898 - 5064004
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaa 106  Q
    ||||| ||| |||||||||||| |||||| ||||| |||||| |  ||  ||||| |||||||| |||||||||||||||  |||||||  || || |||    
T  5063898 tagagacatacgcactggccaagcgttgtgcccctaagaatcgaatccaatattccccagatacgtccttggaaggagcttcttgccaccagagcctaaa 5063997  T
Q  107 caacttg 113  Q
    |||||||    
T  5063998 caacttg 5064004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 17389831 - 17389713
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||| |||||||||||||||| ||||| ||||||||| || |||| |  ||| ||||  || || || || ||| ||||||||| |||||||||||     
T  17389831 catgcgtggaggcatgcgcactggtcaaacattgttcccccgaaaatcgaatccgatatttcccggaaacgtcattgaaaggagctccttgccactggag 17389732  T
Q  101 cccaaacaacttggttaaa 119  Q
     |||| | |||||||||||    
T  17389731 tccaagctacttggttaaa 17389713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 21849255 - 21849300
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatc 48  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||||    
T  21849255 tgcgtagaggcatgcgcactagccaagcgttgttcccctgggaatc 21849300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26258755 - 26258638
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||| ||||||| |||||| |||| ||||||   |||||||||| |  ||||||||| || | ||| || ||||||||||||| || | ||| ||     
T  26258755 catgcgtaaaggcatgtgcactgaccaagcgttgtcttcctgagaatcgaatccggtattccccgggtacgtctttggaaggagctccttactacttgaa 26258656  T
Q  101 cccaaacaacttggttaa 118  Q
     |||||||||||||||||    
T  26258655 tccaaacaacttggttaa 26258638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 41743302 - 41743217
Alignment:
Q  31 gttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    |||||| | ||| ||||| | ||||||||||  | ||||| |||||||||||||||| ||||||| ||| ||||| ||||||||||    
T  41743302 gttgtttctctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccaccggagcccaagcaacttggtt 41743217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12744571 - 12744687
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||| |||||||||| | ||| ||||||||||| ||| |||| |  | | |||||  ||||||| ||||||||||||| ||  || |||||||    
T  12744571 catgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatacgtccttggaaggagttcaatgtcactgga 12744670  T
Q  100 tcccaaacaacttggtt 116  Q
      |||||||||||||||    
T  12744671 gtccaaacaacttggtt 12744687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12755561 - 12755677
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||| |||||||||| | ||| ||||||||||| ||| |||| |  | | |||||  ||||||| ||||||||||||| ||  || |||||||    
T  12755561 catgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatacgtccttggaaggagttcaatgtcactgga 12755660  T
Q  100 tcccaaacaacttggtt 116  Q
      |||||||||||||||    
T  12755661 gtccaaacaacttggtt 12755677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14254316 - 14254432
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||| ||||||||| ||||||||| ||||||| ||||||| |||| | | |||||||| ||  |||| ||||||||| ||| || ||||| |||||    
T  14254316 catgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattccccgaatacgtccttggaatgagttccttgcccctgga 14254415  T
Q  100 tcccaaacaacttggtt 116  Q
      | || ||||||||||    
T  14254416 ggctaagcaacttggtt 14254432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 14357813 - 14357697
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||| ||||||||| |||   ||  |||| | || | |||| ||||||||| |||||||||| | ||| ||||||||||| |    
T  14357813 tgcgtagaggcatgcgcactggtcaaacgttgtttcaattggaaatcgaacctgatattttccagatacgtccttggaagaaactccttgccactggagc 14357714  T
Q  102 ccaaacaacttggttaa 118  Q
     ||| |||||| |||||    
T  14357713 tcaagcaacttagttaa 14357697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 892397 - 892463
Alignment:
Q  52 cccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggttaa 118  Q
    |||||||||| ||  |||| |||||| ||||||||| ||||||||| | |||||||||||| |||||    
T  892397 cccggtattccccgaatacgtccttgaaaggagctccttgccactgaagcccaaacaacttcgttaa 892463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 13262141 - 13262063
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaa 80  Q
    ||||||||| |||||| | || ||||||||||||| |||||  |||| | |||||||||| ||| ||||||||||||||    
T  13262141 tgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggtattccccatatacatccttggaa 13262063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 10507758 - 10507721
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc 38  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  10507758 catgcgtagaggtatgcacactggccaaacgttgttcc 10507721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 40226357 - 40226406
Alignment:
Q  67 atacatccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    |||| |||||||||||||||| ||||||||| | ||||| ||||||||||    
T  40226357 atacgtccttggaaggagctccttgccactgaaacccaatcaacttggtt 40226406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 42267736 - 42267688
Alignment:
Q  68 tacatccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    |||||| ||| ||||||||| |||||| |||| ||||||||||||||||    
T  42267736 tacatcattgtaaggagctccttgccagtggagcccaaacaacttggtt 42267688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21898711 - 21898594
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||||| | |||||||||| || ||||| |||||||||||||||| |||||||||||    
T  21898711 catgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgga 21898612  T
Q  100 tcccaaacaacttggtta 117  Q
     ||||| |||||||||||    
T  21898611 gcccaagcaacttggtta 21898594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29333186 - 29333302
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||| | |||||||||| |  | ||| |||||||||||||||| |||||||| ||     
T  29333186 catgcgtagaggcatgcgcactggccaaacgttgttcccctggaaatcgaacccggtattccctgggtacgtccttggaaggagctcattgccactagag 29333285  T
Q  101 cccaaacaacttggtta 117  Q
    |||||||||||||||||    
T  29333286 cccaaacaacttggtta 29333302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 30788906 - 30788996
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgg 98  Q
    ||||||||||||||||||||||||||||||||  |||||||||| |||| ||||| || |||||||||||||||||||||| ||||||||||    
T  30788906 tagaggcatgcgcactggccaaacgttgttcca-tgagaatcaaacccgatattccccggatacatccttggaaggagctccttgccactgg 30788996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5253270 - 5253386
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||||| || ||||| | |||||||||| || | ||| |||||||||||||||| |||||| ||||    
T  5253270 catgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccattgga 5253369  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  5253370 gcccaagcaacttggtt 5253386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14107405 - 14107521
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||| ||||| | |||||||||| ||  |||| || ||||||||||||| |||||||||||    
T  14107405 catgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtctttggaaggagctccttgccactgga 14107504  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  14107505 gcccaaacaacttggtt 14107521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 24671915 - 24672029
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| |||||| |||  ||||||||| ||| ||||  | ||||||||||||||||||| |||||| ||||||||| ||||||||||| |    
T  24671915 tgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgtccttgaaaggagctccttgccactggagc 24672014  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  24672015 ccaagcaacttggtt 24672029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 2271352 - 2271464
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    ||||||||| ||||||||||||| || |||||||| | |||||||| | |||||||||| ||  |||| |||||||||||||||| ||||||||||| ||    
T  2271352 tgcgtagagacatgcgcactggctaagcgttgttctc-tgagaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcc 2271450  T
Q  103 caaacaacttggtt 116  Q
    ||| ||||||||||    
T  2271451 caagcaacttggtt 2271464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8932724 - 8932607
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||| |||||  |||||||||| || ||||| | |||| ||||| || |||||||||||||||||| ||| |||||||||||    
T  8932724 catgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccggatacatccttggaaggaactccttgccactgga 8932625  T
Q  100 tcccaaacaacttggtta 117  Q
       |||||||||||||||    
T  8932624 gttcaaacaacttggtta 8932607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8944190 - 8944073
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||| |||||  |||||||||| || ||||| | |||| ||||| || |||||||||||||||||| ||| |||||||||||    
T  8944190 catgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccggatacatccttggaaggaactccttgccactgga 8944091  T
Q  100 tcccaaacaacttggtta 117  Q
       |||||||||||||||    
T  8944090 gttcaaacaacttggtta 8944073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13036051 - 13036164
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||||| ||| |||| | |||| ||||| ||  |||| |||||||||||||||| |||||||||||    
T  13036051 catgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccgatattccccgaatacgtccttggaaggagctccttgccactgga 13036150  T
Q  100 tcccaaacaacttg 113  Q
     ||||| |||||||    
T  13036151 gcccaagcaacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34954666 - 34954774
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||||| | || ||||||| |||| ||| |||||||||||||||| |||||| ||||    
T  34954666 catgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaacctggtattccccaggtacgtccttggaaggagctccttgcca-tgga 34954764  T
Q  100 tcccaaacaa 109  Q
     |||||||||    
T  34954765 gcccaaacaa 34954774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6606144 - 6606260
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||  ||||||||||  |||||||||| |||||||| | |||||||||| || ||||| |||||||||||||||| |||||||||      
T  6606144 catgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgtg 6606243  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  6606244 gcccaagcaacttggtt 6606260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 10311518 - 10311632
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| |||||||||||||||| ||||||||||| |||| ||| | |||||||||| || ||||| | |||||||||||||| |||| |||||| |    
T  10311518 tgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacgttcttggaaggagctccttgctactggagc 10311617  T
Q  102 ccaaacaacttggtt 116  Q
    |||| |||| |||||    
T  10311618 ccaagcaacatggtt 10311632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 19230608 - 19230720
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    |||||||||||||||  |||| |||| |||||||||| ||| |||| |  ||||||||| | || ||| |||||||||||||||| ||||||||||| ||    
T  19230608 tgcgtagaggcatgcatactgaccaagcgttgttcccttgaaaatcgaatccggtattcccgag-tacgtccttggaaggagctccttgccactggagcc 19230706  T
Q  103 caaacaacttggtt 116  Q
    ||||||||||||||    
T  19230707 caaacaacttggtt 19230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8612021 - 8612137
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||| |||||| |||||| ||| ||||||||| |||  ||||| | |||||||||| || | ||| |||||||||||||||| |||||||||||    
T  8612021 catgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 8612120  T
Q  100 tcccaaacaacttggtt 116  Q
      |||||||||||||||    
T  8612121 gtccaaacaacttggtt 8612137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29444812 - 29444930
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| |||||||||||  || |||| | |||||||| | || | ||| || ||||||||||||| |||||||| ||    
T  29444812 catgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaacccggtatcccccgggtacgtctttggaaggagctccttgccactaga 29444911  T
Q  100 tcccaaacaacttggttaa 118  Q
     |||||  |||||||||||    
T  29444912 gcccaagtaacttggttaa 29444930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 3587992 - 3588104
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||| ||| ||||||||||| ||||||||||| || ||||| | ||||||||||||| ||||| || ||||||  | ||| |||||||| ||    
T  3587992 catgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaacccggtattctccggatacgtctttggaataaactccttgccacttga 3588091  T
Q  100 tcccaaacaactt 112  Q
     ||||||||||||    
T  3588092 gcccaaacaactt 3588104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 12635875 - 12635792
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagc 85  Q
    |||||||||||||||||||| ||||| ||||||| |||||| ||||||| || ||||||| || ||||| ||||||||||||||    
T  12635875 tgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaatcaaacctggtattccccggatacgtccttggaaggagc 12635792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 15643890 - 15643991
Alignment:
Q  14 atgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttg 113  Q
    ||||||| ||||| |  |||||||||||| ||||| | |||| ||||| |||||||| ||||||||| |||||| ||||||||||| ||||| |||||||    
T  15643890 atgcgcattggcctagtgttgttcccctgtgaatcgaacccgttattc-ccagatacgtccttggaatgagctccttgccactggagcccaagcaacttg 15643988  T
Q  114 gtt 116  Q
    |||    
T  15643989 gtt 15643991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 19089559 - 19089445
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| ||||||||||  |||||| |||||| ||||||| || |||||||  | ||||| |||||| || |||||| |||| |||||| |    
T  19089559 tgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaacctggtattcctcggatacgtccttgaaatgagctccttgcgactggagc 19089460  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  19089459 ccaagcaacttggtt 19089445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 13468994 - 13468877
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| |||||| |||| |||||||||||  || |||  | || ||||||| || ||||| |||||||||||||||| |||||||  || |    
T  13468994 tgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaattgaacctggtattccccggatacgtccttggaaggagctccttgccaccagagc 13468895  T
Q  102 ccaaacaacttggttaaa 119  Q
    |||| |||||||||||||    
T  13468894 ccaagcaacttggttaaa 13468877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 3601138 - 3601034
Alignment:
Q  10 aggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaaca 108  Q
    ||||||||||||||||||| ||||||| |||||||||||| |  ||||||||| ||  |||| |  |||||| ||||||||||||||| || ||||| ||    
T  3601138 aggcatgcgcactggccaagcgttgttccccctgagaatcgaaaccggtattccccgaatacgtatttggaaagagctctttgccactagagcccaagca 3601039  T
Q  109 acttg 113  Q
    |||||    
T  3601038 acttg 3601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 9147363 - 9147251
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||| ||||||| |||  || ||||||| || ||||| | |||| ||||| |||| ||| ||||||||| |||||| || ||||||||     
T  9147363 atgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgagctccttcccactggag 9147264  T
Q  101 cccaaacaacttg 113  Q
    |||||||||||||    
T  9147263 cccaaacaacttg 9147251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9179783 - 9179899
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||| ||||  ||||| |||  |||||||||| || ||||| | |||||||||| |  | ||| ||||||||| |||||| |||||||||||    
T  9179783 catgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccctgggtacgtccttggaatgagctccttgccactgga 9179882  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  9179883 gcccaaacaacttggtt 9179899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 12606491 - 12606399
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgcca 94  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||| |  | ||||||| || ||||| | |||||||||||||| ||||||    
T  12606491 tgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaatctggtattccccggatacgttcttggaaggagctcattgcca 12606399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 9366472 - 9366575
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||| |||| |||||| | | |||| | || | ||||| |||  |||||||||||||||||||| ||| ||||||| |    
T  9366472 tgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatcgaacctgatattccccaagtacatccttggaaggagctccttgtcactggagc 9366571  T
Q  102 ccaa 105  Q
    ||||    
T  9366572 ccaa 9366575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 21016799 - 21016917
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||| ||||||||||| ||||| | ||  ||||||| ||| || |||| | |||||||||| || | ||| ||| |||||||||||| |||||||||||     
T  21016799 atgcatagaggcatgcacactgactaagtgttgttctccttaggaatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactggag 21016898  T
Q  101 cccaaacaacttggttaaa 119  Q
    ||||| |||||||||||||    
T  21016899 cccaagcaacttggttaaa 21016917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8938774 - 8938657
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||| || |||||||||| |||  |||||||| |||| ||||| | ||  |||||| || ||||  || ||||||||||||| ||| |||||||    
T  8938774 catgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaaccaagtattccccggatatgtctttggaaggagctccttgtcactgga 8938675  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  8938674 gcccaaacaacttggtta 8938657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 13391347 - 13391302
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatc 48  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||    
T  13391347 tgcgtagaggcatgcgcactggccaaacattgttcccctgaaaatc 13391302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 3030702 - 3030782
Alignment:
Q  37 cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtta 117  Q
    |||||| ||||| | |||| ||||| | | |||| ||||||||| |||||| ||||||||||| |||||||||||||||||    
T  3030702 cccctgggaatcgaacccgatattcccgaaatacgtccttggaatgagctccttgccactggagcccaaacaacttggtta 3030782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5029880 - 5029832
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatc 48  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  5029880 catgcgtagaggcatgcgcactgaccaaacgttgttctccctgagaatc 5029832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 33859367 - 33859405
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  33859367 atgcgtagaggcatgcgcactgggcaaacgttgttcccc 33859405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8888945 - 8888905
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct 41  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  8888945 catgcgtagaggtatgcgcactggccaaacgttgtttccct 8888905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13584497 - 13584533
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc 37  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13584497 catgcatagaggcatgcgcactggccaaacgttgttc 13584533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 10312801 - 10312694
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    |||||||||||| || || ||||||||| ||| ||||| ||||| | |||||||||  |||| |   ||||||||||||||||||| ||||| || ||||    
T  10312801 gtagaggcatgcacattgcccaaacgttattctccctgggaatcgaacccggtatttcccaggtttgtccttggaaggagctctttaccactagagccca 10312702  T
Q  105 aacaactt 112  Q
    ||| ||||    
T  10312701 aacgactt 10312694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 11142666 - 11142631
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  11142666 catgcgtagaggcatgcgcactggtcaaacgttgtt 11142631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 9633674 - 9633708
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttc 37  Q
    |||||||||||||||||||||||||| ||||||||    
T  9633674 tgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 32048506 - 32048397
Alignment:
Q  9 gaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattc-tccagatacatccttggaaggagctctttgccactggatcccaaa 106  Q
    ||||||||| ||||| ||||||||||||| |||||| |||| |  | | ||||| || || |||||||||||||||||||| || ||||||||  |||||    
T  32048506 gaggcatgcacactgaccaaacgttgttctccctgaaaatcgaatctgatattcctcgag-tacatccttggaaggagctccttaccactggagtccaaa 32048408  T
Q  107 caacttggtta 117  Q
    |||||| ||||    
T  32048407 caacttagtta 32048397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 375021 - 375058
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc 38  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  375021 catgcatagaggcatgcgcactggccaaacgttattcc 375058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 17115001 - 17115062
Alignment:
Q  57 tattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggttaa 118  Q
    |||||||||  ||| |||||||||||||||  ||||||||||| ||||| ||| ||||||||    
T  17115001 tattctccatgtacgtccttggaaggagcttcttgccactggagcccaagcaatttggttaa 17115062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 5759619 - 5759575
Alignment:
Q  72 tccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    ||||||||||||| || ||||||||||| ||||| ||||||||||    
T  5759619 tccttggaaggagttccttgccactggagcccaagcaacttggtt 5759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10396536 - 10396496
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct 41  Q
    ||||| |||||  ||||||||||||||||||||||||||||    
T  10396536 catgcatagagatatgcgcactggccaaacgttgttcccct 10396496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38075497 - 38075380
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||||  |||| |||||||||||| ||| ||||| |||||    
T  38075497 catgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggtattctccgaatacgtccttggaaggaactccttgccgctgga 38075398  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  38075397 gcccaaacaacttggtta 38075380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 53599124 - 53599007
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||| | |||||||||| || | ||| |||||||||||||||| |||||| ||||    
T  53599124 catgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccaatgga 53599025  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  53599024 gcccaaacaacttggtta 53599007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 29895851 - 29895733
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||||| || ||||| | |||||||||| || ||||| |||||||||||||||| |||||||||||    
T  29895851 catgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgga 29895752  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||| ||||||||||||    
T  29895751 gcccaagcaacttggttaa 29895733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1446890 - 1446773
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||||| || ||||| | |||||||||| || ||||| |||||||||||||||| |||||||||||    
T  1446890 catgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgga 1446791  T
Q  100 tcccaaacaacttggtta 117  Q
     ||||| |||||||||||    
T  1446790 gcccaagcaacttggtta 1446773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13073602 - 13073486
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||| ||||||||||||||||| ||||||||| || ||||| | | ||||||||||||| ||| |||||||||||||||| |||||||| ||    
T  13073602 catgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaactcggtattctccaggtacgtccttggaaggagctcattgccactaga 13073503  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  13073502 gcccaaacaacttggtt 13073486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 5472897 - 5473007
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| || ||||||| || ||||| |||||| || |||||| ||||||||||| |    
T  5472897 tgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccggatacgtccttgaaatgagctccttgccactggagc 5472996  T
Q  102 ccaaacaactt 112  Q
    |||||||||||    
T  5472997 ccaaacaactt 5473007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 6779275 - 6779159
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| |||||||||||||||||||||   |||||||||| || ||||| | ||||||||||||||| ||| |||||||||| ||||| |||||||||||    
T  6779275 catgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggtattctccaggtacgtccttggaagaagctccttgccactgga 6779176  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  6779175 gcccaaacaacttggtt 6779159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 2559369 - 2559255
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaa-tcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||| ||||||||| |  |||| || |  ||||||||| |||| ||| |||||||||||||||| ||||||||||| |    
T  2559369 tgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatccggtattccccaggtacgtccttggaaggagctcgttgccactggagc 2559270  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  2559269 ccaaacaacttggtt 2559255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 38166089 - 38165975
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| |||||||||||||||| ||||||||||| || ||||| | ||| |||||| || ||||| |||||||||||||||| |||||| |||| |    
T  38166089 tgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaacccagtattccccggatacgtccttggaaggagctccttgccagtggagc 38165990  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  38165989 ccaaacaacttggtt 38165975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 41339444 - 41339562
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||| | |||||||||| |||||||||||| | || || | ||||||||||||| | ||| |||||||||||||||| |||||||| || |    
T  41339444 tgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaacccggtattctccgggtacgtccttggaaggagctccttgccactagagc 41339543  T
Q  102 ccaaacaacttggttaaag 120  Q
    |||||||||||||||||||    
T  41339544 ccaaacaacttggttaaag 41339562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 47078520 - 47078406
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| ||||||||||| ||||||||||| || ||||| | |||||||||| || | ||| |||||||||||||||| ||||||||||| |    
T  47078520 tgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggaac 47078421  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  47078420 ccaagcaacttggtt 47078406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 52950146 - 52950028
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||| |||||| |||||||||||||||| ||||||||||| || ||||| | |||| ||||| |||| ||| |||||||||||||||| |||||||| ||    
T  52950146 catgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattccccaggtacgtccttggaaggagctccttgccactaga 52950047  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||||||||||||||||    
T  52950046 gcccaaacaacttggttaa 52950028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 24166512 - 24166397
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||||||||| ||||| || ||||| | ||| |||||| ||   ||| |||||||||||||||| ||||||||||| |    
T  24166512 tgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattccccgagtacgtccttggaaggagctccttgccactggagc 24166413  T
Q  102 ccaaacaacttggtta 117  Q
    |||| |||||||||||    
T  24166412 ccaatcaacttggtta 24166397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 27248488 - 27248375
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||  ||||||| ||||||||| |||| || || | |||||||||| || ||||| |||||||||||||||| ||||||||||| |    
T  27248488 tgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcgaacccggtattccccggatacgtccttggaaggagctcgttgccactggagc 27248391  T
Q  102 ccaaacaacttggtta 117  Q
    |||| |||||||||||    
T  27248390 ccaagcaacttggtta 27248375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 295582 - 295688
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||| |  | ||||||| || ||||| ||||| ||||| | || ||||||||||| ||    
T  295582 tgcgtagaggcatgcgcactggccaaacgttgttcctctgggaatcgaatctggtattccccggatacgtccttagaaggtgttccttgccactggagcc 295681  T
Q  103 caaacaa 109  Q
    |||||||    
T  295682 caaacaa 295688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 3574495 - 3574609
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||||||||||||||  ||||||| ||||| ||||  | | |||||||| | || ||| |||||||||||||||| ||||||||||| |    
T  3574495 tgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttggaaggagctccttgccactggagc 3574594  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  3574595 ccaagcaacttggtt 3574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15839982 - 15840080
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||||||| |||  ||  ||||| | |||||||||| |||  ||| |||||||||||||||| |||||||||||    
T  15839982 catgcgtagaggcatgcgcactggccaaacgttattcttctaggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactgga 15840080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 4736657 - 4736545
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    ||||||||||||| || ||||||||||||||| || ||||||||  | ||||||||||  | | |||||||||| ||||||||| ||||||||||| | |    
T  4736657 cgtagaggcatgcacattggccaaacgttgtttccactgagaattgaacccggtattcctcgggtacatccttgaaaggagctcattgccactggagctc 4736558  T
Q  104 aaacaacttggtt 116  Q
    |||||||||||||    
T  4736557 aaacaacttggtt 4736545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 36262816 - 36262911
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||| ||||||||||| |||||||||| || ||||| | ||||||||||||| | ||| |||||||||||||||  |||||||||||    
T  36262816 tgcgtagaggcatgtgcactggccaagcgttgttccc-tgggaatcgaacccggtattctccgggtacgtccttggaaggagcttcttgccactgga 36262911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 55921094 - 55920982
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    ||||||||||||||||||| ||||  |||||||||| || ||||| | |||||||||| || | | | |||||||||||||||| ||||||||||| |||    
T  55921094 cgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagccc 55920995  T
Q  104 aaacaacttggtt 116  Q
    || ||||||||||    
T  55920994 aagcaacttggtt 55920982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 26479996 - 26480115
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctga-gaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||| |||||||||  ||| ||||||| | ||||| | | |||||||| |||  ||| | |||||||||||||| |||||| ||||    
T  26479996 catgcgtagaggcatgcgtactggccaagtgttattccccttaagaatcgaactcggtattccccatgtacgtacttggaaggagctccttgccagtgga 26480095  T
Q  100 tcccaaacaacttggttaaa 119  Q
     |||||||||||||||||||    
T  26480096 gcccaaacaacttggttaaa 26480115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 15732497 - 15732611
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| |||||||||||  |||||||||| |  ||||| | ||||||||||||| ||||| |||||||||| |  |  ||||||||||| |    
T  15732497 tgcgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaacccggtattctccggatacgtccttggaagaattttcttgccactggagc 15732596  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  15732597 ccaaacaacttggtt 15732611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 40272379 - 40272489
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||||||||||||||| ||||||||||| ||  |||| | |||| ||||| || |||||||| |||||| |||||| || |||| |||     
T  40272379 atgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattccccggatacatcattggaaagagctccttaccaccggag 40272478  T
Q  101 cccaaacaact 111  Q
    |||||||||||    
T  40272479 cccaaacaact 40272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8889086 - 8888969
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||| ||||||||||| ||||  ||||||||||  || |||| | |||||||||| || ||||| ||||| |||||||||| ||||| || ||    
T  8889086 catgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccgctaga 8888987  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  8888986 gcccaaacaacttggtta 8888969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15829763 - 15829646
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| |||| |||||||||||||||||  |||| ||||||||| |||||| |  | |||||||| ||||| |||||| ||| ||||| ||| |||||||    
T  15829763 catgcctagaagcatgcgcactggccaagtgttgattcccctgaaaatcaaactggatattctccggatacgtccttgaaagaagctccttgtcactgga 15829664  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  15829663 gcccaaacaacttggtta 15829646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 19651546 - 19651611
Alignment:
Q  54 cggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggttaaa 119  Q
    ||||||||| | ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  19651546 cggtattcttcggatacgtccttggaaggagctcattgccactggagcccaaacaacttggttaaa 19651611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 40780908 - 40781021
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||| |||| ||||||||||| |||||||| | |||| |||| |||  |||| |||||  ||| ||||| |||||||||||    
T  40780908 catgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaacccgatattttccgaatacgtccttaaaagaagctccttgccactgga 40781007  T
Q  100 tcccaaacaacttg 113  Q
     |||| ||||||||    
T  40781008 gcccagacaacttg 40781021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 43458673 - 43458560
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    |||||||||||||||||||||||| |||| |||| |||| ||||| |  || |||||| ||| |||| ||||||||| |||||  ||||||||||| |||    
T  43458673 cgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtccttggaatgagcttcttgccactggagccc 43458574  T
Q  104 aaacaacttggtta 117  Q
    || |||||||||||    
T  43458573 aagcaacttggtta 43458560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 42722426 - 42722542
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||| |||||| ||||||||||| |||  |||||||||||| ||||||| |||||||||| || | |||||| ||| ||||||||| |  ||||||||     
T  42722426 catgcatagaggtatgcgcactggtcaagtgttgttcccctgggaatcaaacccggtattccccgggtacatctttgaaaggagctcctctccactggag 42722525  T
Q  101 cccaaacaacttggtta 117  Q
     ||||||||||| ||||    
T  42722526 tccaaacaacttagtta 42722542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 14124075 - 14123964
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    |||||||||||||||||||||||| |||||| |||||| ||||| | || |||||||  ||  ||| | |||||||||||||  |||||| |||| ||||    
T  14124075 gtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaacctggtattcctcaagtacgttcttggaaggagcttcttgccattggagccca 14123976  T
Q  105 aacaacttggtt 116  Q
    ||||||||||||    
T  14123975 aacaacttggtt 14123964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 12887306 - 12887367
Alignment:
Q  56 gtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtta 117  Q
    ||||||| ||||||||||||| ||| || ||||||||||||||| |||||||||||||||||    
T  12887306 gtattctacagatacatccttagaatgatctctttgccactggagcccaaacaacttggtta 12887367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 20128371 - 20128274
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||| ||||||||||||||||||| | ||||||||| |||||||| | ||| |||||| || ||||| |||||||||||| ||| ||||| |||||    
T  20128371 tgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaacccagtattccccggatacgtccttggaaggaactccttgccgctgga 20128274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 1940826 - 1940937
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||   |||| ||||||||||| || ||||| | |||| ||||  || | ||| |||||||||||||||| |||||||| || |    
T  1940826 tgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatttcccgggtacgtccttggaaggagctccttgccactagagc 1940922  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  1940923 ccaaacaacttggtt 1940937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 3159518 - 3159597
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaa-tcaaccccggtattctccagatacatccttggaag 81  Q
    |||||||||||||||||||||||||| |||||||||||   ||| || | ||||||||||||| ||||| ||||||||||    
T  3159518 tgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaacccggtattctccggatacgtccttggaag 3159597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 27531717 - 27531820
Alignment:
Q  13 catgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaactt 112  Q
    |||||||| ||||||| | |||||||| || ||||| | |||||||||| |  | ||| |||||||||||||||| |||||||||||  |||| ||||||    
T  27531717 catgcgcattggccaagcattgttcccatgggaatcgaacccggtattccctgggtacgtccttggaaggagctccttgccactggagtccaagcaactt 27531816  T
Q  113 ggtt 116  Q
    ||||    
T  27531817 ggtt 27531820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42722624 - 42722711
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||||  | |||||||||  || | ||| ||||||||||||||||    
T  42722624 catgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaacccggtatttcccgggtacgtccttggaaggagctc 42722711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 49260714 - 49260829
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||  |   | |||||| || ||||||||||||||||||| || |||||| || |      
T  49260714 tgcgtagaggcatgcgcactggccaagcgttgttccccttgggaattgaattcagtattccccggatacatccttggaaggagttccttgccattgaaat 49260813  T
Q  102 ccaaacaacttggtta 117  Q
    |||| |||||||||||    
T  49260814 ccaagcaacttggtta 49260829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20532456 - 20532573
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||||| ||||  |||| | | ||||||||||| | ||   |||||||| |||| | |||||||||||    
T  20532456 catgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctccgggtatggccttggaatgagcaccttgccactgga 20532555  T
Q  100 tcccaaacaacttggtta 117  Q
      |||| ||| |||||||    
T  20532556 gtccaagcaatttggtta 20532573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 13552148 - 13552068
Alignment:
Q  31 gttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaac 110  Q
    |||||||| |||||||||| | |||| ||||| || ||||| | |||||||||||||| ||||||||||| ||||||||||    
T  13552148 gttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 13552068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20354701 - 20354585
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||| ||||| |||||||| |||||  |||||| | ||||||| | |   | | ||||||||||||| || |||||||||||    
T  20354701 catgcgtagaggcatgcgcactagccaagcgttgttctccctggaaatcaaactcggtatttttcgagttcgtccttggaaggagatccttgccactgga 20354602  T
Q  100 tcccaaacaacttggtt 116  Q
      |||||||| ||||||    
T  20354601 gtccaaacaagttggtt 20354585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24850674 - 24850770
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactg 97  Q
    |||||||||||||||||||||||| |||  ||||||||||||| |||  |  | ||||||  || ||||| ||||||||| |||||| |||||||||    
T  24850674 catgcgtagaggcatgcgcactggtcaagtgttgttcccctgataattgaatctggtatttcccggatacgtccttggaatgagctccttgccactg 24850770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 34667701 - 34667765
Alignment:
Q  52 cccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    |||||||||| || | ||| |||||||||||||||| |||||||| || ||||||||||||||||    
T  34667701 cccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 34667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7246693 - 7246776
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaagga 83  Q
    |||||||||||||||||||||||||||| |||||||||| ||  ||||| | ||| |||||| || | ||| ||||||||||||    
T  7246693 catgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaacccagtattccccgggtacgtccttggaagga 7246776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17080107 - 17080068
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  17080107 catgcgtagaggcatgcgcactggccaagcgttgttcccc 17080068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 20421837 - 20421727
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||| ||||||  |||| |  || |||||| |||||||| || ||| ||||||||| ||||||||| |    
T  20421837 catgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcga-accagtattccccagatacgtctttgaaaggagctccttgccactgaa 20421739  T
Q  100 tcccaaacaact 111  Q
     ||||| |||||    
T  20421738 gcccaagcaact 20421727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 29588798 - 29588687
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||| ||||| | ||||| |||||| ||||| | |||||||||  || |  || || |||||| |||||| ||||||||||| |    
T  29588798 tgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggtatttcccgggcacgtctttggaatgagctccttgccactggagc 29588699  T
Q  102 ccaaacaacttg 113  Q
    |||| |||||||    
T  29588698 ccaatcaacttg 29588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 36145262 - 36145357
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccac 95  Q
    |||| ||||||||||||||||||  ||| ||||| |||||||| ||||| | |||||||||| || | ||| ||||||||| |||||| |||||||    
T  36145262 catgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtattccccgggtacgtccttggaatgagctccttgccac 36145357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 47682431 - 47682478
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaa 50  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  47682431 tgcgtagagacatgtgcactggccaaacgttattcccctgagaatcaa 47682478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 7000516 - 7000466
Alignment:
Q  72 tccttggaaggagctctttgccactggatcccaaacaacttggttaaagaa 122  Q
    |||||||||||||||  ||||||||| | ||||||||||||||||||||||    
T  7000516 tccttggaaggagcttcttgccactgtagcccaaacaacttggttaaagaa 7000466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 38168320 - 38168227
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgcca 94  Q
    |||||||||||||||| ||||||||||| ||||||||| || || |||| | || ||||||| || | ||| |||||||||||||||| ||||||    
T  38168320 catgcgtagaggcatg-gcactggccaagcgttgttcctcttaggaatcgaacctggtattccccgggtacgtccttggaaggagctccttgcca 38168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41162929 - 41163047
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| |||| |||||  ||||||||||  ||||||||| |||  |||| | | |||||||  || ||||| |||||||||||||||| ||| |||||||    
T  41162929 catgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcccggatacgtccttggaaggagctccttgtcactgga 41163028  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||| ||||||||||||    
T  41163029 gcccaagcaacttggttaa 41163047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 48317324 - 48317438
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||| | ||||| |||| ||||||||| ||||| |||| |  || ||||| | |  |||| || |||||| |||||||||||||||||| |    
T  48317324 tgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccagtatttttcgaatacgtcattggaatgagctctttgccactggagc 48317423  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  48317424 ccaagcaacttggtt 48317438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 6032739 - 6032800
Alignment:
Q  52 cccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttg 113  Q
    |||||||||| || | ||| |||||||||||||||| ||||||||||| ||||| |||||||    
T  6032739 cccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 6032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 8064845 - 8064957
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||| |||  ||| |||||| || ||||| | ||| ||||||| ||| ||| | ||| ||||||||||||||| ||| ||    
T  8064845 catgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtattct-caggtacgttcttagaaggagctctttgctactaga 8064943  T
Q  100 tcccaaacaacttg 113  Q
     || ||||||||||    
T  8064944 gcctaaacaacttg 8064957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 21429363 - 21429326
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21429363 tgcgtagaggcatgcgcactggctaaacgttgttcccc 21429326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46108755 - 46108714
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctg 42  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  46108755 catgcgtagaggcatgcgcactagccaaatgttgttcccctg 46108714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 55005355 - 55005448
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccac 95  Q
    |||||||||||||||||| ||| ||| ||||| |||||||| ||||| |   |||||||  |||||||| || ||||||||||||| |||||||    
T  55005355 tgcgtagaggcatgcgcaatggtcaagcgttgtttcccctgcgaatcgaattcggtatttcccagatacgtctttggaaggagctcattgccac 55005448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 14568021 - 14567900
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagc---tctttgcca--ct 96  Q
    |||||||||| ||| ||||||| ||| |||| ||| ||||||||||| | || ||||||| ||| |||| ||||| ||||||||   || ||||||  ||    
T  14568021 tgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaaggagctgatccttgccactct 14567922  T
Q  97 ggatcccaaacaacttggttaa 118  Q
    ||| ||||||||||||||||||    
T  14567921 ggagcccaaacaacttggttaa 14567900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 14858770 - 14858662
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||||| |||||||||||| ||| | |  | |||||| ||| | | ||||||||||||| | ||||||||||||||||| || ||| || |||| | ||    
T  14858770 cgtagagacatgcgcactggtcaagcttgatccccctgggaaccgaacccggtattctccgggtacatccttggaaggagttcattgtcaatggagctca 14858671  T
Q  105 aacaacttg 113  Q
    |||||||||    
T  14858670 aacaacttg 14858662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 21192702 - 21192619
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    |||||||||||||||||||||||| ||||||||||| | || | || | |||||||||  ||| |||| || |||||||||||||    
T  21192702 tgcgtagaggcatgcgcactggcccaacgttgttcctcgga-actcgaacccggtatttcccaaatacgtcattggaaggagctc 21192619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31588750 - 31588631
Alignment:
Q  1 catgcgtagaggcatgcgcactggcca--aacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactg 97  Q
    ||||||||||| |||||||||||||||  | ||||| |||| ||| ||||||| |||  ||||| ||  |||| ||||| ||| |||||| ||| |||||    
T  31588750 catgcgtagagacatgcgcactggccaagagcgttgtttcctctgggaatcaaacccaatattccccgaatacgtccttagaacgagctccttgacactg 31588651  T
Q  98 gatcccaaacaacttggtta 117  Q
     | |||||||||||||||||    
T  31588650 aagcccaaacaacttggtta 31588631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 1123867 - 1123954
Alignment:
Q  30 cgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    |||||||||| ||||||||| |  ||| ||||||||| ||||||| ||| ||||||||| || ||||| || || |||||||||||||    
T  1123867 cgttgttccctctgagaatcgaatccgatattctccaaatacatcattgaaaggagctccttaccacttgagccaaaacaacttggtt 1123954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16450364 - 16450325
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  16450364 catgcgtagaggcatgtgcactggccaagcgttgttcccc 16450325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 35359799 - 35359752
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatc 48  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  35359799 atgcgttgaggcatgcgcactggtcaaacgttgttccccctgagaatc 35359752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 48015122 - 48015181
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattc 61  Q
    ||||||||||| |||||||||||||| |||||||||| ||| ||||| | ||||||||||    
T  48015122 tgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaacccggtattc 48015181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 8424612 - 8424582
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttc 37  Q
    |||||||||||||||||||||||||||||||    
T  8424612 tagaggcatgcgcactggccaaacgttgttc 8424582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 14567243 - 14567199
Alignment:
Q  72 tccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    ||||||||| |||||| ||||||||||| ||||| ||||||||||    
T  14567243 tccttggaatgagctccttgccactggagcccaagcaacttggtt 14567199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17946553 - 17946465
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctt 89  Q
    |||| ||||| ||||||||||||| |||   |||||||||||| |||| |  | | ||||| ||| |||||||||| ||||||||||||    
T  17946553 catgtgtagaagcatgcgcactggtcaagaattgttcccctgaaaatcgaatctgctattccccatatacatccttcgaaggagctctt 17946465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 37369091 - 37369127
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc 39  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  37369091 tgcgtagaggcatgcacactggacaaacgttgttccc 37369127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41163507 - 41163622
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||| |||| ||||||||||||||||||||||||| ||||| | |||||||||| || | ||| | |||||||||||||| |||||||||||     
T  41163507 catgcgtagagacatgtgcactggccaaacgttgttcccctgggaatcgaacccggtattccccgggtacgttcttggaaggagctccttgccactggag 41163606  T
Q  101 cccaaacaacttggtt 116  Q
    ||||||||||||||||    
T  41163607 cccaaacaacttggtt 41163622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19572784 - 19572668
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||||| || ||||| | |||||||||| || ||||| |||||||||||||||| |||||||||||    
T  19572784 catgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccggatacgtccttggaaggagctccttgccactgga 19572685  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  19572684 gcccaagcaacttggtt 19572668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1538491 - 1538374
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||||| || ||||| | |||||||||| ||  |||| |||| ||||||||||| |||||||||||    
T  1538491 catgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgaatacgtcctcggaaggagctccttgccactgga 1538392  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  1538391 gcccaaacaacttggtta 1538374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 5731971 - 5732083
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||| | |||||||||| || | ||| |||||||||||||||| ||||||||||| |||    
T  5731971 cgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagccc 5732070  T
Q  104 aaacaacttggtt 116  Q
    || ||||||||||    
T  5732071 aagcaacttggtt 5732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 30349639 - 30349523
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaa-tcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| |||||||||||||||||||||| | |||||||||  |||| |||| |||||||||| || ||||| |||||||||||| ||| |||||||||||    
T  30349639 catgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggaactccttgccactgga 30349540  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  30349539 gcccaaacaacttggtt 30349523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 37263298 - 37263183
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| | |||| ||||| || | ||| ||||| |||||| ||| ||||||||||| ||    
T  37263298 tgcgtagaggcatgcgcattggccaagcgttgttcccctgagaatcgaacccgatattccccgggtacgtccttagaaggaactccttgccactggagcc 37263199  T
Q  103 caaacaacttggttaa 118  Q
    ||| ||||||||||||    
T  37263198 caagcaacttggttaa 37263183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 18136327 - 18136445
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||| |||||||||||| ||||| ||||  |||||||||| || ||||| | ||||||||||||| ||||| || ||||||||||||| |||||||||||    
T  18136327 catgtgtagaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactgga 18136426  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||||||||||||||||    
T  18136427 gcccaaacaacttggttaa 18136445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20525898 - 20525782
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||| ||  |||||||| |||| ||||| | |||| ||||| || |||||||||||| ||||||||| |||||||||||    
T  20525898 catgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccgatattccccggatacatccttgaaaggagctccttgccactgga 20525799  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  20525798 gcccaagcaacttggtt 20525782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28857188 - 28857072
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||||| || ||||| | |||||||||| || | | | |||||||||||||||| |||||||||||    
T  28857188 catgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactgga 28857089  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  28857088 gcccaagcaacttggtt 28857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 42086387 - 42086268
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||| ||| ||||||||||| || ||||| | ||||||||||  | | ||| |||||||||||||||| ||||||| |||    
T  42086387 catgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccaccgga 42086288  T
Q  100 tcccaaacaacttggttaaa 119  Q
     ||||| |||||||||||||    
T  42086287 gcccaagcaacttggttaaa 42086268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 25417234 - 25417347
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||| | |||||||||| ||   ||| |||||||||||||||| ||||||||||| |||    
T  25417234 cgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagccc 25417333  T
Q  104 aaacaacttggttaa 118  Q
    ||| |||||||||||    
T  25417334 aaa-aacttggttaa 25417347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9812932 - 9812816
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||| |||||| |||||||||| ||||||||| |||  ||||| | |||||||||| || | ||| |||||||||||||||| |||||||||||    
T  9812932 catgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 9812833  T
Q  100 tcccaaacaacttggtt 116  Q
      |||||||||||||||    
T  9812832 gtccaaacaacttggtt 9812816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12766191 - 12766075
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||| |||||||||| | ||||||| ||| |||||| | |||||||||| || | ||| |||||||||||||||| |||||||| ||    
T  12766191 catgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactcga 12766092  T
Q  100 tcccaaacaacttggtt 116  Q
      |||||||||||||||    
T  12766091 gtccaaacaacttggtt 12766075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 26077199 - 26077083
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| ||||||||||| |||||||||| ||| ||||| | ||  |||||| ||| |||| ||||||||| |||||| || |||||||| |    
T  26077199 tgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagctccttaccactggagc 26077100  T
Q  102 ccaaacaacttggttaa 118  Q
    |||||||||||||||||    
T  26077099 ccaaacaacttggttaa 26077083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 5079389 - 5079275
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||| ||||||||| || |||| || |||||||| ||  |||||||||||||||||  | ||||| | |||||||||||||||||||||| ||| |    
T  5079389 tgcgtagaagcatgcgcattgaccaagcgctgttccccctggaaatcaaccccggtattccacggatacgtgcttggaaggagctctttgccaccggaac 5079290  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  5079289 ccaaacaacttggtt 5079275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 35403561 - 35403678
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccaga-tacatccttggaaggagctctttgccactggat 100  Q
    ||||||||| |||||||| ||||||| ||||||||||| | |||||| | ||||||||| ||| || ||| |||||||||||||||| |||||||||||     
T  35403561 tgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatt-tcccgagtacgtccttggaaggagctccttgccactggag 35403659  T
Q  101 cccaaacaacttggttaaa 119  Q
    ||||||||| |||||||||    
T  35403660 cccaaacaagttggttaaa 35403678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 1899050 - 1898953
Alignment:
Q  12 gcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaaca 108  Q
    ||||||||||||||||| ||||||||||| || ||||| | |||||||||| || | |||||||||||||||||||| ||||||||| | ||||||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactgtagcccaaaca 1898953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 3653963 - 3654075
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    |||||||||||||||||||||| ||| |||||||| |  | ||||| | ||||||||||||| | ||| ||||||||| |||||| ||| ||||||| ||    
T  3653963 tgcgtagaggcatgcgcactggtcaagcgttgttctctag-gaatcgaacccggtattctccgggtacgtccttggaaagagctcattgtcactggagcc 3654061  T
Q  103 caaacaacttggtt 116  Q
    ||||||||||||||    
T  3654062 caaacaacttggtt 3654075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 38897768 - 38897861
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccact 96  Q
    |||||||||||||||||||||||||| |||||||||||||  |||| | |||||||||| ||| |||| |||||| || |||||| ||||||||    
T  38897768 tgcgtagaggcatgcgcactggccaagcgttgttcccctggaaatcgaacccggtattccccatatacgtccttgtaaagagctccttgccact 38897861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12705074 - 12704958
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||| |||||| |||||| ||| ||||||||| |||  ||||| | |||||||||| || | ||| |||||||||||||||| |||||||||||    
T  12705074 catgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 12704975  T
Q  100 tcccaaacaacttggtt 116  Q
      |||||||||||||||    
T  12704974 gtccaaacaacttggtt 12704958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13664320 - 13664225
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccac 95  Q
    ||||||||||||||||||||||||||||  |||||| ||||||| |||| |  ||||||||| | |||||| |||||||||||||||| |||||||    
T  13664320 catgcgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaatccggtattccctagatacgtccttggaaggagctccttgccac 13664225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 14152104 - 14152001
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaa 105  Q
    |||| |||||| |||||||||| ||||||||||  |||||||| | |||||||||| |||| |||||| ||||||||||||| ||||||||||| || ||    
T  14152104 tagaagcatgcacactggccaagcgttgttccctatgagaatcgaacccggtattccccaggtacatcattggaaggagctccttgccactggagccgaa 14152005  T
Q  106 acaa 109  Q
    ||||    
T  14152004 acaa 14152001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14974371 - 14974487
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||| |||||||||||| |||||||||| | |||||| | |||| |||||||| ||||| ||||| ||| |||||| ||||||  |||    
T  14974371 catgcgtagaggcatgtgcactggccaaatgttgttcccctttagaatcgaacccgatattctccggatacgtccttagaatgagctccttgcca--gga 14974468  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||| ||||||||||||    
T  14974469 gcccaagcaacttggttaa 14974487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 7866639 - 7866525
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| |||||||||| ||||||||| |||  ||||| | ||||||||||  | | ||| |||||||||||||||| |||||||||||      
T  7866639 tgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccactggagt 7866540  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  7866539 ccaagcaacttggtt 7866525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 38297013 - 38297127
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||| | |||||||||| ||||||||||||||||| | ||||  | ||||||||||  ||  ||||||||| |||||||||| ||||||||||| |    
T  38297013 tgcgtagaagaatgcgcactgaccaaacgttgttccccttgggaattgaacccggtattcctcaagtacatccttagaaggagctccttgccactggagc 38297112  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||| ||||||    
T  38297113 ccaaacaatttggtt 38297127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7308411 - 7308524
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||| |||||| |||| ||||||||||| || ||||| | |||| |||||  || |||| ||||||||| |||||| |||||||| ||    
T  7308411 catgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcctcaaatacgtccttggaatgagctccttgccactaga 7308510  T
Q  100 tcccaaacaacttg 113  Q
     |||||||||||||    
T  7308511 acccaaacaacttg 7308524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9168300 - 9168415
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||||| ||||||||||||||| ||||||||| ||| |||||   | |||||||| || ||||| || |||||||||| || |||||||||||     
T  9168300 catgcgtagaggtatgcgcactggccaagcgttgttcctctgggaatcgttctcggtattccccggatacgtctttggaaggag-tccttgccactggag 9168398  T
Q  101 cccaaacaacttggtta 117  Q
    | ||| |||||||||||    
T  9168399 ctcaagcaacttggtta 9168415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23383717 - 23383592
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattc-tc--------cagatacatccttggaaggagctcttt 90  Q
    |||||||||||||| ||||||||||||| ||||||||||| || ||||| | |||||||||| ||        | ||||| |||||||||||||||| ||    
T  23383717 catgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtattcctctgatacgtctgatacgtccttggaaggagctcctt 23383618  T
Q  91 gccactggatcccaaacaacttggtt 116  Q
    ||||||||| ||||||||||||||||    
T  23383617 gccactggagcccaaacaacttggtt 23383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 42861265 - 42861381
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||| ||||| | |||  | |||| ||||| || ||||  ||||||||| |||||| |||||||||||    
T  42861265 catgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaacccgatattccccggatatgtccttggaatgagctccttgccactgga 42861364  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||| ||||||    
T  42861365 gcccaaacaatttggtt 42861381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 4016307 - 4016421
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    |||||||||||||||||||||||  |||||||||| ||| |||| | |||| ||||   ||| ||| ||||||||| |||||  ||||||||||| ||||    
T  4016307 gtagaggcatgcgcactggccaagtgttgttccccctgataatcgaacccgatatttctcaggtacgtccttggaatgagcttcttgccactggagccca 4016406  T
Q  105 aacaacttggttaaa 119  Q
     ||||||||||||||    
T  4016407 tacaacttggttaaa 4016421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 6767130 - 6767216
Alignment:
Q  32 ttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggttaa 118  Q
    ||||||||||  ||||| | |||||||||| || | ||| |||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  6767130 ttgttcccctatgaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggttaa 6767216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 8513577 - 8513463
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| ||||||||||| | ||||| |||||  ||||| | |||||||||| || | ||| |||||||||||||||| |||||||| ||      
T  8513577 tgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccacttgagt 8513478  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  8513477 ccaagcaacttggtt 8513463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 20692986 - 20692880
Alignment:
Q  8 agaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaa 106  Q
    ||||||||| | ||||||||| ||||||| || ||  ||||||| |||||||||| || | ||| |||||||||| |||||||||||||| || ||||||    
T  20692986 agaggcatgtgtactggccaagcgttgtttcctctaggaatcaaacccggtattccccgggtacgtccttggaagaagctctttgccactagagcccaaa 20692887  T
Q  107 caacttg 113  Q
    |||||||    
T  20692886 caacttg 20692880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 14588664 - 14588761
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactg 97  Q
    |||||||||||||||||||||||| ||| |||| |||| ||||| |||| | |||| ||||| |||||||| |||||| ||| ||||| |||||||||    
T  14588664 catgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaacccgatattccccagatacgtccttgaaagaagctccttgccactg 14588761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 39728444 - 39728331
Alignment:
Q  4 gcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    |||||||||||||| ||||||||||  |||||| || |||| |||| | || ||||||| || | ||| | ||||||| |||||| ||||||||||| ||    
T  39728444 gcgtagaggcatgcacactggccaagtgttgtttcctctgataatcgaacctggtattccccgggtacgttcttggaaagagctccttgccactggagcc 39728345  T
Q  103 caaacaacttggtt 116  Q
    ||||||||||||||    
T  39728344 caaacaacttggtt 39728331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9805064 - 9805002
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattct 62  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||| | |||||||||||    
T  9805064 catgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattct 9805002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14728143 - 14728026
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc--tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgg 98  Q
    ||||||||||||||||||||||| |||| |||||| ||||  ||| |||| |  ||||||||  ||| | |   |||||||| |||||| ||||||||||    
T  14728143 catgcgtagaggcatgcgcactgaccaagcgttgtccccccctgaaaatcgaatccggtatttcccaaaaatgaccttggaatgagctcattgccactgg 14728044  T
Q  99 atcccaaacaacttggtt 116  Q
    | ||||||||||||||||    
T  14728043 agcccaaacaacttggtt 14728026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 30995179 - 30995085
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccact 96  Q
    ||||||||||||||||| ||||||||  |||||| |||||| ||||| | || ||||||| |||  ||| |||||||||||||||| ||||||||    
T  30995179 tgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgtacgtccttggaaggagctccttgccact 30995085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 38369757 - 38369699
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattc 61  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| | |||| |||||    
T  38369757 tgcgtagaggcatgcgcactggccaagtgttgttcccctgagaatcgaacccgatattc 38369699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 42291554 - 42291616
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctcc 64  Q
    |||||||||||||| ||||||||||| |||||||| ||||| ||||||| |||||||||||||    
T  42291554 tgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccggtattctcc 42291616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 12081966 - 12081885
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaagga 83  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||| | ||| |||||| || ||||| ||||| ||||||    
T  12081966 tgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaacccagtattccccggatacgtcctttgaagga 12081885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 28862883 - 28862786
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||| ||| ||||||| ||||||||| |||||||||| | || | ||||| ||  |||| || ||||||||||||| |||||||||||    
T  28862883 tgcgtagaggcatgtgcattggccaagcgttgttccgcctgagaatcgaacctgatattccccgaatacgtctttggaaggagctccttgccactgga 28862786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 24498991 - 24498927
Alignment:
Q  52 cccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    |||| |||||||||||||| |||||||||||||||| |||| ||| || ||||||||||| ||||    
T  24498991 cccgatattctccagatacgtccttggaaggagctccttgctactagagcccaaacaactcggtt 24498927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 28857000 - 28856920
Alignment:
Q  37 cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtta 117  Q
    |||||| ||||| | |||||||||| || | | | |||||||||||||||| ||||||||||| ||||| |||||||||||    
T  28857000 cccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggtta 28856920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 2485252 - 2485141
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||||||||||||||| |||| |  |||||||||||  ||||| | ||| |||||| |   |||| ||||||||| |||||| |||||| ||||  |||    
T  2485252 cgtagaggcatgcgcacaggcccagggttgttcccctaggaatcgaacccagtattccctgaatacgtccttggaatgagctccttgccattggagtcca 2485153  T
Q  105 aacaacttggtt 116  Q
    ||||||||||||    
T  2485152 aacaacttggtt 2485141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 11845852 - 11845887
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    ||||||||||||||||||||||||||||||||||||    
T  11845852 cgtagaggcatgcgcactggccaaacgttgttcccc 11845887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 20682666 - 20682781
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaa-ggagctctttgccactggat 100  Q
    |||||||||||||||||||||||||| ||||||| ||||||  |||| | |||  ||||| || | ||| ||||| ||| ||||||| ||| |||||||     
T  20682666 tgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatctaacccaatattccccgggtacgtccttagaatggagctccttgtcactggag 20682765  T
Q  101 cccaaacaacttggtt 116  Q
    ||||| ||||||||||    
T  20682766 cccaagcaacttggtt 20682781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 40117475 - 40117436
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  40117475 catgcgtagaggcatgcgcactggccaagcgttgttcccc 40117436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20156191 - 20156309
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| |||| ||||||||||| |||||  ||||||| || || |||||||   || ||||| ||  ||||||| |||||||||||||||| ||||||||    
T  20156191 catgcatagatgcatgcgcactagccaagtgttgttctccatgggaatcaaaatcgatattccccgaatacatcattggaaggagctctttaccactgga 20156290  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||| |||| |||||||    
T  20156291 gcccaagcaacctggttaa 20156309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35561865 - 35561983
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||| ||||||||||||||||||| ||   ||||||||| |||  | || | | || ||||| || ||||| || |||||||||||||||||||||||||    
T  35561865 catgtgtagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccccggatacgtcattggaaggagctctttgccactgga 35561964  T
Q  100 tcccaaacaacttggttaa 118  Q
      |||| ||||||||||||    
T  35561965 gtccaagcaacttggttaa 35561983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20255429 - 20255313
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||| |||  |||||||  ||||||   | |||||||||||| ||   ||| ||||| ||| |||||| |||||||  ||    
T  20255429 catgcgtagaggcatgcgcactggtcaagtgttgttcgtcctgagttacgaccccggtattccccgagtacgtccttagaatgagctccttgccaccaga 20255330  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  20255329 gcccaaacaacttggtt 20255313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 31890071 - 31890031
Alignment:
Q  77 ggaaggagctctttgccactggatcccaaacaacttggtta 117  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  31890071 ggaaggagctctttgccacgggagcccaaacaacttggtta 31890031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18294531 - 18294646
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||| ||||||| |||||||||| |||| |||||||||||||   ||  | |||||||||||||   ||  ||||||||||||| || ||| ||||| |     
T  18294531 catgtgtagaggtatgcgcactgaccaagcgttgttcccctggatattgaacccggtattctccgagtatgtccttggaaggagttccttgtcactgaag 18294630  T
Q  101 cccaaacaacttggtt 116  Q
     |||||||||||||||    
T  18294631 tccaaacaacttggtt 18294646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 20590059 - 20590020
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  20590059 catgcgtagagtcatgcgcactggccaagcgttgttcccc 20590020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 20705622 - 20705587
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttc 37  Q
    |||||||||||||||||||||| |||||||||||||    
T  20705622 atgcgtagaggcatgcgcactgaccaaacgttgttc 20705587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 23247400 - 23247511
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||  ||||  ||| ||||||||| |||| ||||| | |||| ||||| |||| ||| ||||||||| |||||| |||| |||| |      
T  23247400 tgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaacccgatattccccaggtacgtccttggaatgagctccttgctactgaagt 23247499  T
Q  102 ccaaacaacttg 113  Q
    ||||||||||||    
T  23247500 ccaaacaacttg 23247511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 41801035 - 41800925
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| |||||||| ||| ||| ||||||||||| |||||||| | |||| ||||| |||||||| || ||| |||||  || || |||| |||      
T  41801035 tgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaacccgatattccccagatacgtcattgaaaggaattccttaccacgggagt 41800936  T
Q  102 ccaaacaactt 112  Q
    |||||||||||    
T  41800935 ccaaacaactt 41800925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 16755109 - 16755004
Alignment:
Q  13 catgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaact 111  Q
    ||||||||||||||||  |||| ||| ||||| |||| | ||| |||||| || ||||| || |||||| |||||| ||||||||| | |||||  ||||    
T  16755109 catgcgcactggccaagtgttgtttctcctgaaaatcgaacccagtattccccggatacgtctttggaaagagctccttgccactgaagcccaaggaact 16755010  T
Q  112 tggtta 117  Q
    ||||||    
T  16755009 tggtta 16755004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 21149792 - 21149755
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  21149792 tgcgtagagtcatgcgcactggtcaaacgttgttcccc 21149755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 25452983 - 25452926
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtatt 60  Q
    ||||||||||||||| |||||| ||||| |||||||||||| ||| || | |||||||    
T  25452983 tgcgtagaggcatgcacactggtcaaacattgttcccctgaaaattaaactcggtatt 25452926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 43399186 - 43399149
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  43399186 tgcgtagaggcatgcgcactggccaagcgttattcccc 43399149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7616980 - 7616940
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct 41  Q
    |||||||||||||||||  ||||| ||||||||||||||||    
T  7616980 catgcgtagaggcatgcatactggtcaaacgttgttcccct 7616940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 25950641 - 25950741
Alignment:
Q  13 catgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaact 111  Q
    ||||||||||||||||  |||||| |||| || |||||| || | ||||| ||   ||| ||||| |||||||||| || |||||||| |||||||||||    
T  25950641 catgcgcactggccaagtgttgtttcccttgaaaatcaaacctgatattccccgagtacgtcctttgaaggagctccttaccactggagcccaaacaact 25950740  T
Q  112 t 112  Q
    |    
T  25950741 t 25950741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7747333 - 7747215
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||| |||||||||||||||||||| |||  ||||| | |||||||||| || ||||| |||||||||||||||| |||||||||||    
T  7747333 catgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgga 7747234  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||| ||||||||||||    
T  7747233 gcccaagcaacttggttaa 7747215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10026663 - 10026780
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| |||   ||| |||||||||||||||| |||||| ||||    
T  10026663 catgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtattttccgagtacgtccttggaaggagctccttgccattgga 10026762  T
Q  100 tcccaaacaacttggtta 117  Q
     ||||| |||||||||||    
T  10026763 gcccaagcaacttggtta 10026780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38005461 - 38005344
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||| ||||||||||||||||||||||| |||||||||||| | ||||| | ||| |||||| || | ||| |||||||||||||||| |||||||||||    
T  38005461 catgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccagtattccccgggtacgtccttggaaggagctccttgccactgga 38005362  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  38005361 gcccaaacaacttggtta 38005344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 2149243 - 2149359
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatc-aaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||||||||||||||||||| ||||||  | ||||| ||| ||||||||| ||||||||||||||| ||| || || |||||||||||     
T  2149243 tgcgtagaggcatgcgcactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatccttgaaagaagttccttgccactggag 2149342  T
Q  101 cccaaacaacttggtta 117  Q
    |||||||||||||||||    
T  2149343 cccaaacaacttggtta 2149359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 8410188 - 8410073
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||||||||||||||  |||||||||| || ||||| | |||| |||||||| | ||| |||||||||||||||| ||||||||||| |    
T  8410188 tgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactggagc 8410089  T
Q  102 ccaaacaacttggtta 117  Q
    |||| |||||||||||    
T  8410088 ccaagcaacttggtta 8410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20612582 - 20612700
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttccc--ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgg 98  Q
    ||||| ||||||||||||||||||||||  |||||||||  ||||||||| | |||||||||| ||  ||||| ||||||||||||||| ||||||||||    
T  20612582 catgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcgaacccggtattccccgaatacaaccttggaaggagctccttgccactgg 20612681  T
Q  99 atcccaaacaacttggtta 117  Q
    | ||||| |||||||||||    
T  20612682 agcccaagcaacttggtta 20612700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 42770700 - 42770815
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||  | |||||||||   | ||||| |||||||||||||||||||||||||||| |    
T  42770700 tgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgtccttggaaggagctctttgccactggagc 42770799  T
Q  102 ccaaacaacttggtta 117  Q
    |||| |||||||||||    
T  42770800 ccaagcaacttggtta 42770815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10046524 - 10046640
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||| | |||||||||| |||| ||||||| | ||||||||||||| ||||| | |||||||||||||| |||||| ||||    
T  10046524 catgcgtagaggcatgcgcactgtc-aaacgttgtttcccttgagaatcgaacccggtattctccggatacgttcttggaaggagctccttgccattgga 10046622  T
Q  100 tcccaaacaacttggtta 117  Q
     ||||| |||||||||||    
T  10046623 gcccaagcaacttggtta 10046640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 21286501 - 21286384
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||| ||| ||||||| | |||| ||||| | |||||||||| || ||||| |||||||||||||||| ||||||||||| |    
T  21286501 tgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagc 21286402  T
Q  102 ccaaacaacttggttaaa 119  Q
     ||||||||||| |||||    
T  21286401 tcaaacaacttgattaaa 21286384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3643934 - 3644050
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||||| |  || |||||| |||||||||| || ||||| ||||||||| |||||| || ||||||||    
T  3643934 catgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtattccccggatacgtccttggaatgagctcctttccactgga 3644033  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  3644034 gcccaagcaacttggtt 3644050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24179627 - 24179513
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||    | ||| ||||||||||||||||||||||||| ||     
T  24179627 catgcgtagaggcatgtgcactggccaaacgttgttcccctgagaatcga-accggtattc-atgggtacgtccttggaaggagctctttgccactagag 24179530  T
Q  101 cccaaacaacttggtta 117  Q
    |||||||||||| ||||    
T  24179529 cccaaacaacttagtta 24179513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38962822 - 38962706
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||| | |||||||||| || ||||| |||||| || |||||| || ||||||||    
T  38962822 catgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattccccggatacgtccttgaaatgagctccttaccactgga 38962723  T
Q  100 tcccaaacaacttggtt 116  Q
      |||||||||||||||    
T  38962722 gtccaaacaacttggtt 38962706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41220694 - 41220595
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||||| | |||||||||| || | ||| |||||||||||||||| |||||||||||    
T  41220694 catgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 41220595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 45263716 - 45263827
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||| | |||||||||| || |||| ||  ||| ||||||||| ||||||||||| |    
T  45263716 tgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaatttttgaaaggagctccttgccactggagc 45263815  T
Q  102 ccaaacaacttg 113  Q
    ||||||||||||    
T  45263816 ccaaacaacttg 45263827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 44139541 - 44139427
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||| ||||||||||||| ||||||||||| || ||||| | |||||||||| |||||| ||||||||||||||| || |  |||||||| |    
T  44139541 tgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccagatgcatccttggaaggagttcctcaccactggagc 44139442  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  44139441 ccaagcaacttggtt 44139427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 44945650 - 44945536
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    ||||||||||||||||||||  |||| ||||||||| ||| ||||||| ||| |||||||||   ||| |||||||||||||||| |||||||| || ||    
T  44945650 tgcgtagaggcatgcgcactatccaagcgttgttcctctgggaatcaaacccagtattctccgagtacgtccttggaaggagctccttgccacttgagcc 44945551  T
Q  103 caaacaacttggtta 117  Q
    ||| |||||||||||    
T  44945550 caagcaacttggtta 44945536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 331560 - 331443
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||| |||||||||||||||||  |||||||||| || ||||| | |||||||||| || | ||| ||||||||| |||||| |||||||||||    
T  331560 catgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaagagctcattgccactgga 331461  T
Q  100 tcccaaacaacttggtta 117  Q
     ||||| |||||||||||    
T  331460 gcccaagcaacttggtta 331443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 34356265 - 34356148
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| ||||||||||||||||| ||||  |||||||||| ||  |||| | |||||||||| |||||||| |||||||||  ||||| |||||||||||    
T  34356265 catgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatagctccttgccactgga 34356166  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  34356165 gcccaaacaacttggtta 34356148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 19976855 - 19976971
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||| ||||||||||| ||||||||| |||||| ||| |||| | |||||||||| || ||||| ||||||||| |||||  |||||||||||     
T  19976855 atgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccggatacgtccttggaaagagctacttgccactggag 19976954  T
Q  101 cccaaacaacttggtta 117  Q
    ||||||||| |||||||    
T  19976955 cccaaacaatttggtta 19976971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 21180363 - 21180479
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| |||||||||||  ||||||| || || ||||| |  |||||||||| | | ||| |||||||||||||||| ||||||||||| |    
T  21180363 tgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggagctccttgccactggagc 21180462  T
Q  102 ccaaacaacttggttaa 118  Q
    |||||||||||||||||    
T  21180463 ccaaacaacttggttaa 21180479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 14853421 - 14853532
Alignment:
Q  8 agaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaa 106  Q
    |||||||| ||||||||||||| |||||||||| ||| |||| |  | ||||||| || |||||||||||| |||||| || ||||||||||| ||||||    
T  14853421 agaggcatacgcactggccaaaagttgttccccctgaaaatcgaatctggtattccccggatacatccttgaaaggagttccttgccactggagcccaaa 14853520  T
Q  107 caacttggttaa 118  Q
    ||||||||||||    
T  14853521 caacttggttaa 14853532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 18649073 - 18649192
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||| |||||  ||||||| |||||||||| |  ||||||||| |   || |||||||||||| ||||  |||||||||||    
T  18649073 catgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtattccctgaatgcatccttggaagcagcttcttgccactgga 18649172  T
Q  100 tcccaaacaacttggttaaa 119  Q
     |||||||||||||||||||    
T  18649173 gcccaaacaacttggttaaa 18649192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 37560230 - 37560119
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| | || |||||||  | | ||| |||||||||||||||  || |||||||| |    
T  37560230 tgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaacctggtattcctcgggtacgtccttggaaggagcttcttaccactggagc 37560131  T
Q  102 ccaaacaacttg 113  Q
    ||||||||||||    
T  37560130 ccaaacaacttg 37560119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 2550927 - 2550810
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||| ||||||||||||| ||  |||||||| |||| ||||| | |||| ||||| || ||||| |||||| ||||||||| |||||||||||    
T  2550927 catgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacgtccttgtaaggagctccttgccactgga 2550828  T
Q  100 tcccaaacaacttggtta 117  Q
     ||||| |||||||||||    
T  2550827 gcccaagcaacttggtta 2550810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 10823117 - 10823032
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||||| |||||||||| || | ||| ||||||||||||||||    
T  10823117 tgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaacccggtattccccgggtacgtccttggaaggagctc 10823032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22593193 - 22593077
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||||||| || ||||| | | | |||||| || | ||| |||||||||||||||| |||||||||||    
T  22593193 catgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaactcagtattccccgggtacgtccttggaaggagctccttgccactgga 22593095  T
Q  100 tcccaaacaacttggtta 117  Q
     | ||| |||||||||||    
T  22593094 gcacaagcaacttggtta 22593077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 25540453 - 25540550
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||| ||||||| |||||  ||||| | ||| |||||| |||||||| ||||||||| |||||| |||||||||||    
T  25540453 tgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaacccagtattccccagatacgtccttggaatgagctccttgccactgga 25540550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 18902579 - 18902693
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| || ||||||||| ||| ||||||||||| || ||||| | |||||||||| ||   ||| |||||||||||||||| ||||||||||| |    
T  18902579 tgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagc 18902678  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  18902679 ccaagcaacttggtt 18902693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 11069935 - 11069819
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||| ||||||||||||||||||||||| |||||  ||||| | || ||||||| || | ||| ||||||||| |||||| | |||| |||| |    
T  11069935 tgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaacctggtattccccgggtacgtccttggaatgagctcctagccattggagc 11069836  T
Q  102 ccaaacaacttggttaa 118  Q
    | |||||||||||||||    
T  11069835 caaaacaacttggttaa 11069819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13026458 - 13026574
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| | ||||||| ||||| |||| | |||| ||||| |  ||||| ||||||||||||| || |||||||||||    
T  13026458 catgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatattccctggatacgtccttggaaggagttccttgccactgga 13026557  T
Q  100 tcccaaacaacttggtt 116  Q
       ||| ||||||||||    
T  13026558 gttcaatcaacttggtt 13026574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 3848963 - 3849038
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttg 77  Q
    ||||||||| ||||||| |||||||||||||||| ||||||| |||| | ||||||||||||||||||| ||||||    
T  3848963 tgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaacccggtattctccagatacgtccttg 3849038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25604653 - 25604538
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||||||||||  ||||| |||||||||||||||||  |||| |  |||||||| ||| |||||||| ||||||  |||| ||||||||| ||     
T  25604653 catgcgtagaggcatgcatactggtcaaacgttgttcccctggaaatcgaatccggtattttccggatacatctttggaaaaagctatttgccactagag 25604554  T
Q  101 cccaaacaacttggtt 116  Q
    |||||  |||||||||    
T  25604553 cccaagtaacttggtt 25604538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 10669649 - 10669535
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| |||||||||||||||| |||||||| ||||| ||||||| |||||||  | |||| ||| ||||||||||||| || || || |||||      
T  10669649 tgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccggtagcccccaggtacgtccttggaaggagatccttacccctggagt 10669550  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  10669549 ccaagcaacttggtt 10669535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 41031955 - 41032068
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| ||||||||||  |||||||||| || ||||| | |||||| ||| || | ||| |||||||||||||||| ||||||||||| |    
T  41031955 tgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtgttc-cctggtacgtccttggaaggagctccttgccactggagc 41032053  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||| ||||||    
T  41032054 ccaagcaatttggtt 41032068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 14169656 - 14169773
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctg-agaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||| |||||||||||| |||  |||||||||| | |||||| | |||| ||||| ||  |||| ||||||||| || ||| ||| |||||||    
T  14169656 catgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaacccgatattccccgaatacgtccttggaaagatctccttgtcactgga 14169755  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  14169756 gcccaaacaacttggtta 14169773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 39201555 - 39201671
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtatt-ctccagatacatccttggaaggagctctttgccactgg 98  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||||||| |   ||||||| ||| || ||| |||||||||||||||| ||||||||      
T  39201555 catgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaattcggtattcctcgag-tacgtccttggaaggagctccttgccactat 39201653  T
Q  99 atcccaaacaacttggtt 116  Q
    | ||||| ||||||||||    
T  39201654 agcccaatcaacttggtt 39201671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 2528393 - 2528504
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattc-tccagatacatccttggaaggagctctttgccactggatccc 103  Q
    |||||||||||| ||||| |||| ||||||||||| || ||||| | |||||| ||| || || ||| |||||||||||||||| ||||||||||| |||    
T  2528393 gtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaacccggtgttcctcgag-tacgtccttggaaggagctcattgccactggagccc 2528491  T
Q  104 aaacaacttggtt 116  Q
    |||||| ||||||    
T  2528492 aaacaatttggtt 2528504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6358198 - 6358314
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||||||| ||  |||| |  | ||||||| || ||||| ||||| ||| |||||  |||||||||||    
T  6358198 catgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccggatacgtcctttgaatgagcttcttgccactgga 6358297  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||| ||||    
T  6358298 gcccaaacaactcggtt 6358314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12864283 - 12864167
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||| |||||||||||||||| ||||  |||||||||| ||  |||| |  ||||||||| ||  |||| || ||||||||||||| ||| |||||||    
T  12864283 catgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatccggtattccccgaatacgtcattggaaggagctccttgtcactgga 12864184  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  12864183 gcccaaacaacttggtt 12864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 25549785 - 25549681
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| ||||| |||||| ||||||  |||| |||||| | ||| |||||| ||| |||| | |||||||||||||| ||||||||||| |    
T  25549785 tgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaacccagtattccccaaatacgtacttggaaggagctccttgccactggagc 25549686  T
Q  102 ccaaa 106  Q
    |||||    
T  25549685 ccaaa 25549681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 39806937 - 39807041
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||||||||||||||||||||||||||| ||| | || ||||| | |||||||||| || | ||| |||||| |||||||   ||||||||||| ||||    
T  39806937 gtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattccccgggtacgtccttgtaaggagcatcttgccactggagccca 39807036  T
Q  105 aacaa 109  Q
    |||||    
T  39807037 aacaa 39807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 20533173 - 20533058
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    |||||||||||||||| | |||||||||||||   | |||||||||| |||| ||||| |||||||  || ||||||||||||| ||  ||||| | |||    
T  20533173 cgtagaggcatgcgcattagccaaacgttgtttttcgtgagaatcaaacccgatattccccagatatgtctttggaaggagctccttaacactgaagccc 20533074  T
Q  104 aaacaacttggttaaa 119  Q
    |||||||||| |||||    
T  20533073 aaacaacttgcttaaa 20533058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 33005810 - 33005695
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||   | ||||||||||  | | ||| |||| | || |||||| |||||||||||     
T  33005810 catgcgtagaggcatgcgcactggccaagtgttgttcccctgggaacagaacccggtattccacgggtacgtcctagaaatgagctccttgccactggag 33005711  T
Q  101 cccaaacaacttggtt 116  Q
    ||||| ||| ||||||    
T  33005710 cccaagcaatttggtt 33005695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34346334 - 34346421
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    ||||||||||||||||| ||||||||||  |||||| ||||||| |||||| ||| |||||| |||| ||| ||||||||| ||||||    
T  34346334 catgcgtagaggcatgcacactggccaagtgttgttccccctgataatcaaacccagtattccccaggtacgtccttggaatgagctc 34346421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2784991 - 2784900
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgc 92  Q
    ||||||||||||||||||||||| |||||  ||||| |||||| |||| | | ||||||||  | ||||| |||||| ||||||||| ||||    
T  2784991 catgcgtagaggcatgcgcactgaccaaatcttgtttccctgaaaatcgaactcggtattcctcggatacgtccttgaaaggagctcattgc 2784900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 35946795 - 35946685
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    ||||||||||||||| || ||||||| ||||||||||||  ||||| | | |||||||| || ||||| ||||| ||| |||||| || |||| | | ||    
T  35946795 tgcgtagaggcatgcacaatggccaagcgttgttcccctaggaatcgaactcggtattccccggatacgtccttagaatgagctccttaccacggaagcc 35946696  T
Q  103 caaacaacttg 113  Q
    ||| |||||||    
T  35946695 caagcaacttg 35946685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 9360797 - 9360830
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt 36  Q
    ||||||||||||||||||||||||||||||||||    
T  9360797 tgcgtagaggcatgcgcactggccaaacgttgtt 9360830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 15079540 - 15079423
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| ||||| |||||| ||| ||||||||||| ||  |||| | ||| |||||| || | ||| ||||||||||| | || ||||||| ||| |    
T  15079540 tgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggtgttccttgccaccggagc 15079441  T
Q  102 ccaaacaacttggttaaa 119  Q
    |||| |||||||||||||    
T  15079440 ccaagcaacttggttaaa 15079423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 15234110 - 15234195
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    |||||||||||||||||||||| |||  |||||| |||||||||||| | ||  |||||| || | ||| ||||||||||||||||    
T  15234110 tgcgtagaggcatgcgcactggtcaagtgttgttccccctgagaatcgaacctagtattccccgggtacgtccttggaaggagctc 15234195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 16813218 - 16813327
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaa 106  Q
    |||||||||||| ||||| |||||||||||||||||| | |  | |  ||||||||||   ||| |||||||||||||||| ||| || |||| || |||    
T  16813218 tagaggcatgcgtactggtcaaacgttgttcccctgaaagttgaacttggtattctccgagtacgtccttggaaggagctccttgtcagtggagcctaaa 16813317  T
Q  107 caacttggtt 116  Q
    ||||| ||||    
T  16813318 caactaggtt 16813327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 16852497 - 16852606
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaa 106  Q
    |||||||||||| ||||| |||||||||||||||||| | |  | |  ||||||||||   ||| |||||||||||||||| ||| || |||| || |||    
T  16852497 tagaggcatgcgtactggtcaaacgttgttcccctgaaagttgaacttggtattctccgagtacgtccttggaaggagctccttgtcagtggagcctaaa 16852596  T
Q  107 caacttggtt 116  Q
    ||||| ||||    
T  16852597 caactaggtt 16852606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 23500794 - 23500847
Alignment:
Q  66 gatacatccttggaaggagctctttgccactggatcccaaacaacttggttaaa 119  Q
    ||||| || ||||||||||||| ||||||| ||| |||||||||||||||||||    
T  23500794 gatacgtctttggaaggagctccttgccaccggagcccaaacaacttggttaaa 23500847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29421341 - 29421285
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggta 58  Q
    ||||||||||||||||| ||||| |||| |||||||||||||| |||||| |||||||    
T  29421341 catgcgtagaggcatgctcactgcccaagcgttgttcccctga-aatcaaacccggta 29421285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31596479 - 31596592
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||| | ||| ||||||||||||| ||||||||| ||| |||  | || | |||||| | ||||| || ||||||||||||| |||||||||||    
T  31596479 catgcgtagaagtatgtgcactggccaaacattgttccccctgaaaatagaacctgatattctacggatacgtctttggaaggagctccttgccactgga 31596578  T
Q  100 tcccaaacaacttg 113  Q
      |||| |||||||    
T  31596579 atccaagcaacttg 31596592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13104872 - 13104908
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  13104872 catgcgtagaggcatgcgcactggccaagcgttgttc 13104908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 27725997 - 27725949
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaa 50  Q
    |||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  27725997 tgcgtagaggcatgcgcactggccaagcattgttcctcctgagaatcaa 27725949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41187768 - 41187676
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgc 92  Q
    ||||||||||||||||  |||||| |||  |||||||||| | | |||| | ||||||||||| ||||||| ||||| |||||||||| ||||    
T  41187768 catgcgtagaggcatggacactggtcaagtgttgttccccctcataatcgaacccggtattcttcagatacgtccttagaaggagctccttgc 41187676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 13514011 - 13513948
Alignment:
Q  53 ccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    |||||||| ||| ||||||||||||||| |||||| || |||| |||  |||||||||||||||    
T  13514011 ccggtattttccggatacatccttggaaagagctcctttccaccggaggccaaacaacttggtt 13513948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 7787113 - 7787003
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||| |||||||||   ||||| ||||||  |||| | |||||||||| || | ||| |||| | |||||| || ||||||||||| |    
T  7787113 tgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtattccccgggtacgtcctagaaaggagttccttgccactggagc 7787014  T
Q  102 ccaaacaactt 112  Q
    |||| ||||||    
T  7787013 ccaaccaactt 7787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 16034992 - 16034878
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    |||| |||||||| |||||| ||| ||||||||| ||||| |||| | ||||||||||  | ||||| ||||||||||||| || || |||||| |  ||    
T  16034992 cgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcgaacccggtattcctcggatacgtccttggaaggagttccttaccactgaagtcc 16034893  T
Q  104 aaacaacttggttaa 118  Q
    || ||||||| ||||    
T  16034892 aagcaacttgattaa 16034878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 29422272 - 29422158
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||| ||| |||| || |||||||  ||||||||| |||  |||| | ||| |||||| || | ||| |||||| ||||||||| |||| |||||| |    
T  29422272 tgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaacccagtattccccgggtacgtccttgaaaggagctccttgctactggagc 29422173  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  29422172 ccaaacaacttggtt 29422158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3811738 - 3811854
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtatt-ctccagatacatccttggaaggagctctttgccactgg 98  Q
    |||||||||||||||||||| || ||||  ||||||||| ||| ||||| | |||| |||| ||| || ||| ||||||||||||| || |||||| ||     
T  3811738 catgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaacccgatattcctcgag-tacgtccttggaaggagttccttgccattga 3811836  T
Q  99 atcccaaacaacttggtt 116  Q
    |  |||||||||||||||    
T  3811837 agaccaaacaacttggtt 3811854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 20963212 - 20963268
Alignment:
Q  56 gtattctccagatacatccttggaaggagctctttgccactggatcccaaacaactt 112  Q
    |||||| || ||||| || |||||||||| || ||||||||||| ||||||||||||    
T  20963212 gtattccccggatacgtcattggaaggaggtccttgccactggagcccaaacaactt 20963268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 28616428 - 28616540
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagct-ctttgccactggat 100  Q
    ||||||||||||||||||||| ||||  ||| || ||||||| |||| | |||| |||||  | ||||  ||||||||||||| | ||||| |||||||     
T  28616428 tgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaacccgatattccgcggatatgtccttggaaggagttcctttgtcactggag 28616527  T
Q  101 cccaaacaacttg 113  Q
     ||||||||||||    
T  28616528 tccaaacaacttg 28616540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 48804745 - 48804628
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  ||||||||||| | ||||| | |||||||||| || ||||| |||||||||||||||| |||||||||||    
T  48804745 catgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgga 48804646  T
Q  100 tcccaaacaacttggtta 117  Q
     ||||| |||||||||||    
T  48804645 gcccaagcaacttggtta 48804628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 34659286 - 34659174
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||| | |||||||||| || | ||||||| |||||||||||| ||||||||||| |    
T  34659286 tgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacatccctggaaggagctccttgccactggagc 34659187  T
Q  102 ccaaacaacttgg 114  Q
    |||||||||||||    
T  34659186 ccaaacaacttgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 43862019 - 43862135
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||| |||||||| || |||||| |||||| ||||| || ||    
T  43862019 catgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgtctttggaaagagctccttgccgctaga 43862118  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  43862119 gcccaaacaacttggtt 43862135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 1797520 - 1797403
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| |||||||||||||||| ||||||| |||||| ||||| | ||||||||||  | ||||| |||||||||||||||| ||||||||||| |    
T  1797520 tgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccactggagc 1797421  T
Q  102 ccaaacaacttggttaaa 119  Q
    |||| ||||||| |||||    
T  1797420 ccaagcaacttgattaaa 1797403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 43346830 - 43346942
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    ||||||||||||||||| ||||||  ||||||||||| ||||||  | |||||||||| |||||||| || ||||||||||||| |||||||||||  ||    
T  43346830 cgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccggtattccccagatacgtctttggaaggagctccttgccactggagtcc 43346929  T
Q  104 aaacaacttggtt 116  Q
    |||||||||||||    
T  43346930 aaacaacttggtt 43346942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43925574 - 43925458
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||| ||||  |||||||||| || ||||| | |||||||||| || | ||| |||||||||||||||| |||||||||||    
T  43925574 catgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 43925475  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  43925474 gcccaagcaacttggtt 43925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 10047923 - 10048042
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||| ||||||||||||||  |||||||||| || ||||| | |||||||||| || ||||| |||||||||||||||| |||||||||||    
T  10047923 catgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgga 10048022  T
Q  100 tcccaaacaacttggttaaa 119  Q
       ||| |||||||||||||    
T  10048023 gttcaagcaacttggttaaa 10048042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 17748433 - 17748547
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    |||||||||||||||||||||||| ||||||||||| || ||||| | |||||||||| ||  |||| |||||||||| ||||  |||||||| || |||    
T  17748433 cgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgaatacgtccttggaagaagctgcttgccactagagccc 17748532  T
Q  104 aaacaacttggttaa 118  Q
    |||||||||||||||    
T  17748533 aaacaacttggttaa 17748547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4195249 - 4195365
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||| |||||| |||||||| ||||  |||| | | |||||||| || ||||| ||||||| |||||||| |||||||||||    
T  4195249 catgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccggatacgtccttggcaggagctccttgccactgga 4195348  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  4195349 gcccaagcaacttggtt 4195365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 22268088 - 22268192
Alignment:
Q  13 catgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaact 111  Q
    ||||||||||||||||| |||||||||| || ||||| | |||||||||| |||  ||| ||||||||| |||||| ||||||||||| |||||||||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaact 22268187  T
Q  112 tggtt 116  Q
    |||||    
T  22268188 tggtt 22268192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 47341936 - 47341820
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||||||||||||||  |||||||||| || ||||| | | |||||||| || | ||| ||||||||| |||||| ||||||||||| |    
T  47341936 tgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccactggagc 47341837  T
Q  102 ccaaacaacttggttaa 118  Q
    |||| ||||||||||||    
T  47341836 ccaagcaacttggttaa 47341820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19914750 - 19914865
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||||||||||||| ||||||| |||||||||  || ||||| | ||| ||||||   || ||| |||||||||||||||| |||||||||||     
T  19914750 catgcgtagaggcatgcgcattggccaagcgttgttcctttgggaatcgaacccagtattccttaggtacgtccttggaaggagctccttgccactggag 19914849  T
Q  101 cccaaacaacttggtt 116  Q
    ||||| ||||||||||    
T  19914850 cccaagcaacttggtt 19914865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 16802183 - 16802069
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||| |||||||||||| ||||||||| ||| |||||| |  ||||||||| || | ||| |||||||||||||||| ||||||||||| |    
T  16802183 tgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggtattccccgggtacgtccttggaaggagctcattgccactggagc 16802084  T
Q  102 ccaaacaacttggtt 116  Q
    |||  ||||||||||    
T  16802083 ccaggcaacttggtt 16802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 21530808 - 21530694
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| |||||| ||||  |||||||||| || ||||||| ||| |||||| |||| ||| |||||||||||||||| ||||||||||| |    
T  21530808 tgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaacccagtattccccaggtacgtccttggaaggagctccttgccactggagc 21530709  T
Q  102 ccaaacaacttggtt 116  Q
    | || ||||||||||    
T  21530708 cgaagcaacttggtt 21530694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18785731 - 18785614
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||| |||||  ||||| | |||||||||| || | ||| |||||||||||||||  |||||||||||    
T  18785731 catgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccgggtacgtccttggaaggagcttcttgccactgga 18785632  T
Q  100 tcccaaacaacttggtta 117  Q
     ||||  |||||||||||    
T  18785631 gcccatgcaacttggtta 18785614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27875135 - 27875251
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||| |||||||||||  ||| |||||| || ||||| |  ||||||||| |||||||| || ||||||||||||  |||||||||||    
T  27875135 catgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaatccggtattccccagatacgtc-ttggaaggagctacttgccactgga 27875233  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  27875234 gcccaaacaacttggtta 27875251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4228801 - 4228914
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||| |||||| |||||||||||||||||||||  ||  |||| | || |||||||  | ||||| |||||||||||||||| ||||| |||||     
T  4228801 catgcgtaggggcatgtgcactggccaaacgttgttcc--tggaaatcgaacctggtattcctcggatacgtccttggaaggagctccttgccgctggag 4228898  T
Q  101 cccaaacaacttggtt 116  Q
    ||||||||||||||||    
T  4228899 cccaaacaacttggtt 4228914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13095920 - 13095804
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||||||  |||||| |||||| ||||  | |||||||||| || | ||| |||||| ||||||||| ||||||| |||    
T  13095920 catgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaacccggtattccccgggtacgtccttgaaaggagctccttgccacggga 13095821  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  13095820 gcccaagcaacttggtt 13095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22974029 - 22973913
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||| |||||| |||||||||| ||||||||||| |||||||| | |||||||||| ||   ||| |||||||||||||||| | |||| | ||    
T  22974029 catgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaacccggtattccccgagtacgtccttggaaggagctcctcgccattaga 22973930  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  22973929 gcccaaacaacttggtt 22973913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 3353484 - 3353390
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactg 97  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||| | |||| ||||| | |||||| |||||  || |||||| |||||||||    
T  3353484 tgcgtagaggcatgcgcactggccaaatgttgtttccctgagaatcgatcccgatattccctagatacgtccttataatgagctccttgccactg 3353390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 22993416 - 22993530
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| |||||||||| ||||||||| |||  ||||| | |||| ||||| || | ||| |||||||||||||||| |||||||||||      
T  22993416 tgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccgatattccccgggtacgtccttggaaggagctccttgccactggagt 22993515  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  22993516 ccaagcaacttggtt 22993530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 45960051 - 45960168
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||||||||||||||| ||||  |||||| |||| | ||||||| | |||||||| || ||||| ||||||||| |||||| |||| ||||||     
T  45960051 atgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcggtattcccc-gatacgtccttggaaagagctccttgctactggag 45960149  T
Q  101 cccaaacaacttggttaaa 119  Q
    | |||||||||||||||||    
T  45960150 ctcaaacaacttggttaaa 45960168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 24969377 - 24969484
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    |||||||||| |||||||||||||  |||||||||  || |||| | ||||||||| ||||||||| |||||| ||  ||||| ||||||||||| ||||    
T  24969377 cgtagaggcacgcgcactggccaagtgttgttccctgga-aatcgaacccggtattttccagatacgtccttgaaaaaagctccttgccactggagccca 24969475  T
Q  105 aacaacttg 113  Q
    |||||||||    
T  24969476 aacaacttg 24969484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 42032158 - 42032046
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||| | ||| ||||||||||||||||||||||| || ||||| | || ||||||| || | ||| |||||||||||||||  |||| ||||||    
T  42032158 catgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaaccaggtattccccgggtacgtccttggaaggagcttcttgctactgga 42032059  T
Q  100 tcccaaacaactt 112  Q
     ||||||||||||    
T  42032058 gcccaaacaactt 42032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 42210311 - 42210427
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||||||||| || | ||| ||||| |  |||||||||  | ||||| ||||||||| |||||| |||||||||||      
T  42210311 tgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaagccggtattcctcggatacgtccttggaaagagctccttgccactggagt 42210410  T
Q  102 ccaaacaacttggttaa 118  Q
    | || ||||||||||||    
T  42210411 ctaagcaacttggttaa 42210427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 14650379 - 14650260
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||  ||||||| ||| | ||||||| ||||  |||| | |||| |||||||| | ||| |||||||||||||||| |||||||| ||    
T  14650379 catgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactaga 14650280  T
Q  100 tcccaaacaacttggttaaa 119  Q
      ||||||||||||||||||    
T  14650279 gtccaaacaacttggttaaa 14650260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22573874 - 22573759
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||| ||||||||||||||| |||| ||||||||||||| |||| | |||| ||||| ||  ||| ||| ||||||| ||||  |||| ||||||     
T  22573874 catgcgtaaaggcatgcgcactggtcaaatgttgttcccctgaaaatcgaacccgatattcccccaatatatctttggaagaagcttcttgctactggag 22573775  T
Q  101 cccaaacaacttggtt 116  Q
    ||||| ||||||||||    
T  22573774 cccaagcaacttggtt 22573759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 26423336 - 26423451
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||| | ||||||||||| ||||||| |||||| ||||| | ||||||||||    | ||| ||||||||||||| |  ||||||||||| |    
T  26423336 tgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtattccttgggtacgtccttggaaggagtttcttgccactggagc 26423435  T
Q  102 ccaaacaacttggtta 117  Q
    ||||||||||||||||    
T  26423436 ccaaacaacttggtta 26423451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 29805487 - 29805598
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||| ||||||||||| ||||||||||||||| |  ||||| | | |||||||||||  |||| |||||| ||||| ||| || ||||||||     
T  29805487 catgcgtagagacatgcgcactgaccaaacgttgttcccatatgaatcgaactcggtattctccgaatacgtccttgaaaggatctccttaccactggag 29805586  T
Q  101 cccaaacaactt 112  Q
     |||||||||||    
T  29805587 tccaaacaactt 29805598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 1605997 - 1605887
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaa 105  Q
    |||||||||| ||||||||||| ||||||||||| ||  |||| | || |||||||||| | ||| |||||||||||||||| ||| || ||||  ||||    
T  1605997 tagaggcatgtgcactggccaagcgttgttccccctggaaatcgaaccaggtattctccgggtacgtccttggaaggagctccttgtcattggagtccaa 1605898  T
Q  106 acaacttggtt 116  Q
    |||||||||||    
T  1605897 acaacttggtt 1605887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5039465 - 5039581
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||| ||| |||||| ||||  |||||||| |||  ||||| | | |||||||| ||  |||||||  |||||||||||| |||||||||||    
T  5039465 catgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcggtattccccgaatacatctatggaaggagctccttgccactgga 5039564  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  5039565 gcccaaacaacttggtt 5039581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39420899 - 39420781
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||| ||||||||||||| |||||||||| | | || || | || ||||||| || | ||| |||||| ||||||||| |||||||| ||    
T  39420899 catgcgtagaggcacgcgcactggccaagcgttgttccctttgggattcgaacc-ggtattccccgggtacctccttgaaaggagctccttgccactaga 39420801  T
Q  100 tcccaaacaacttggttaaa 119  Q
     ||||| |||||||||||||    
T  39420800 gcccaagcaacttggttaaa 39420781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 365202 - 365084
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||   || ||||||||| |||| ||||| | ||||||||||  | ||||| |  |||||||||||||||| ||||| ||    
T  365202 catgcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaatcgaacccggtattcctcggatacgtttttggaaggagctctttaccactaga 365103  T
Q  100 tcccaaacaacttggttaa 118  Q
     |||||  |||||||||||    
T  365102 gcccaaggaacttggttaa 365084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 20247221 - 20247330
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    ||||||| |||| | |||| |||| ||||||||||| |||||||| | || ||||||| | || |||||||||||||||||||  |||||||| ||| ||    
T  20247221 cgtagagacatgtgtactgcccaagcgttgttccccatgagaatcgaacctggtattcccaag-tacatccttggaaggagcttcttgccactagattcc 20247319  T
Q  104 aaacaacttgg 114  Q
    |||||||||||    
T  20247320 aaacaacttgg 20247330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 8734735 - 8734852
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaa-tcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||| ||||||||||||||| |||| | |||||||||  |||| || | || | ||||| | |||||  |||||||||||||||| |||||||||   |    
T  8734735 tgcgttgaggcatgcgcactgcccaagcattgttcccccaagaaatcgaacctgatattcccgagatatgtccttggaaggagctccttgccactgacgc 8734834  T
Q  102 ccaaacaacttggttaaa 119  Q
    ||||||||||||||||||    
T  8734835 ccaaacaacttggttaaa 8734852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 14535351 - 14535247
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccaga-tacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||| ||||||||||  ||||||| |||||| ||| || |||||||||| || || ||| ||||||||||||| ||||||||| ||||     
T  14535351 tgcgtagaggcatgcacactggccaagtgttgttctccctgaaaatgaaacccggtattc-ccggagtacgtccttggaaggagttctttgccattggag 14535253  T
Q  101 cccaaa 106  Q
    ||||||    
T  14535252 cccaaa 14535247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36619301 - 36619414
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||| |||||| |||  |||||| |||||| ||||| | |||||||||| ||| |||| |||||| |||||| || |||||||| ||    
T  36619301 catgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatacgtccttgcaaggagttccttgccactaga 36619400  T
Q  100 tcccaaacaacttg 113  Q
      ||||| ||||||    
T  36619401 gtccaaataacttg 36619414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38578914 - 38578995
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaag 81  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||| | |||| ||||| || | ||| ||||||||||    
T  38578914 catgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattccccgggtacgtccttggaag 38578995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 9685771 - 9685691
Alignment:
Q  31 gttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaac 110  Q
    |||||||| |||||||||| | |||| ||||| || ||||| | |||||||||||||| ||||||||||| ||||||||||    
T  9685771 gttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 9685691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 27028341 - 27028225
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||| |||||||||||||||||||||||  |||||| ||||||  |||| | || ||||||  |||| ||| | ||||||| |||||| ||||||| |||    
T  27028341 catgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacctggtatttcccaggtacgttcttggaatgagctccttgccaccgga 27028242  T
Q  100 tcccaaacaacttggtt 116  Q
      |||||||||||||||    
T  27028241 gtccaaacaacttggtt 27028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 29151997 - 29151889
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||||||||||||||||| ||||||||||||  |||| ||||| | ||||||||||  ||| ||| ||| || ||||| ||| ||| |||| || ||||    
T  29151997 gtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaacccggtattcctcaggtacgtccatgaaaggaactcattgtcactagagccca 29151898  T
Q  105 aacaacttg 113  Q
    |||||||||    
T  29151897 aacaacttg 29151889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 5069864 - 5069975
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| |||| || || ||||||||| ||||  |||| | |||||||||  || | ||| ||||| |||| ||||| ||||||||||| |    
T  5069864 tgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcgaacccggtatttcccgggtacgtccttagaagaagctccttgccactggagc 5069963  T
Q  102 ccaaacaacttg 113  Q
    ||||||||||||    
T  5069964 ccaaacaacttg 5069975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 23824000 - 23823894
Alignment:
Q  12 gcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaac 110  Q
    ||||||||||||||||||||||| ||||| ||||||||||  | | |||||  | ||||| ||||| |||||||||| || |||| |||   ||||||||    
T  23824000 gcatgcgcactggccaaacgttgtttcccttgagaatcaaatctgatattcctcggatacgtccttagaaggagctccttaccaccggagtgcaaacaac 23823901  T
Q  111 ttggtta 117  Q
    |||||||    
T  23823900 ttggtta 23823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 37514981 - 37514867
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| ||||||||||| ||||||||||||||| |||| |||| | ||| |||||| || | ||  |||||||||||||||  ||| || || |      
T  37514981 tgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaacccagtattccccgggtatgtccttggaaggagctacttgtcattgaagt 37514882  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  37514881 ccaaacaacttggtt 37514867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 21190829 - 21190914
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    |||||||||||||||||||| ||||| ||||| ||| |||  ||||| | |||||||||| || ||||  ||||||||||||||||    
T  21190829 tgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaacccggtattccccggataagtccttggaaggagctc 21190914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 45448027 - 45447915
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||||| ||||||||| ||||| |||||||| |||||  |||| | || ||||||   | | ||| |||||||||||||||| |||||||| || ||||    
T  45448027 gtagagggatgcgcactagccaagcgttgttctccctggaaatcgaacctggtatttctcgggtacgtccttggaaggagctccttgccactagaaccca 45447928  T
Q  105 aacaacttggtta 117  Q
    | |||||||||||    
T  45447927 agcaacttggtta 45447915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 11607187 - 11607080
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaa 105  Q
    |||||| |||| |||||||  ||  |||||||||| ||||||| |  ||| ||||| ||  |||| ||||||||||||| || ||||||||||| |||||    
T  11607187 gtagagtcatgtgcactggttaagtgttgttccccagagaatcgaatccgatattccccgaatacgtccttggaaggagttccttgccactggagcccaa 11607088  T
Q  106 acaacttg 113  Q
     |||||||    
T  11607087 gcaacttg 11607080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 41945533 - 41945486
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaa 50  Q
    |||||||||||||||||||||||||| |||| ||||| ||| ||||||    
T  41945533 tgcgtagaggcatgcgcactggccaagcgttattcccttgaaaatcaa 41945486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45697237 - 45697284
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatc 48  Q
    |||||||||||||||||||||||  |||  ||||||||||||||||||    
T  45697237 catgcgtagaggcatgcgcactgatcaagtgttgttcccctgagaatc 45697284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 46414735 - 46414620
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||| ||||||| |||| |||  |||||||||| | |  |||||||  | | ||| |||||  ||||||||| ||||||| ||| |    
T  46414735 tgcgtagaggcatgcgcattggccaagcgttattcatcctgagaatcgaacttggtattccacgggtacgtccttaaaaggagctccttgccacgggagc 46414636  T
Q  102 ccaaacaacttggtta 117  Q
    ||||||||||| ||||    
T  46414635 ccaaacaacttagtta 46414620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 24407110 - 24407155
Alignment:
Q  64 cagatacatccttggaaggagctctttgccactggatcccaaacaa 109  Q
    ||||||||||| ||||| ||||||||||||| |||| |||||||||    
T  24407110 cagatacatccatggaatgagctctttgccattggagcccaaacaa 24407155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 34127719 - 34127783
Alignment:
Q  52 cccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    |||||||||| || | ||| ||||||||||||| || |||||| |||| ||||| ||||||||||    
T  34127719 cccggtattccccgggtacgtccttggaaggagttccttgccattggagcccaagcaacttggtt 34127783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14846638 - 14846519
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||| | |||||||||| || | ||| ||||| |||||||||  |||||| ||||     
T  14846638 catgcgtagaggcatgcgcactgaccaatcattgttcccctgagaatcgaacccggtattccccgggtacgtccttagaaggagcttcttgccagtggag 14846539  T
Q  101 cccaaacaacttggttaaag 120  Q
    ||||||||||||||||||||    
T  14846538 cccaaacaacttggttaaag 14846519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 8141165 - 8141047
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||| ||||||  |||| | |||||||||| ||  |||| |||||||||| ||||| |||||||||||    
T  8141165 catgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaagcagctccttgccactgga 8141066  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||||||||||||||||    
T  8141065 gcccaaacaacttggttaa 8141047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6100535 - 6100418
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||| |||||||||||||||||| ||||||||| |||| ||||| | |||||||||| || ||||| |||||| ||||||||| ||||||||| |    
T  6100535 catgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttgaaaggagctccttgccactgaa 6100436  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  6100435 gcccaaacaacttggtta 6100418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9860042 - 9860159
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccag-atacatccttggaaggagctctttgccactgg 98  Q
    |||| |||||||||||| ||||||||||  |||||||||| || ||||| | |||||||||| || | |||| |||||||||||||||||||||||||||    
T  9860042 catgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattcccccggatacgtccttggaaggagctctttgccactgg 9860141  T
Q  99 atcccaaacaacttggtt 116  Q
    ||||||||||||||||||    
T  9860142 atcccaaacaacttggtt 9860159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 15884605 - 15884718
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    |||||||||||||||||||| |||||  |||||||||||| ||||| | |||||||||| |||| ||| |||||||||||||||| || |||||||| ||    
T  15884605 tgcgtagaggcatgcgcacttgccaagtgttgttcccctgggaatcgaacccggtattccccaggtacgtccttggaaggagctccttaccactggagcc 15884704  T
Q  103 caaacaacttggtt 116  Q
    ||| ||||||||||    
T  15884705 caatcaacttggtt 15884718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 14666120 - 14666236
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||| | |||||||||| || ||||| ||||||||| |||||| ||||||||||| |    
T  14666120 tgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccactggagc 14666219  T
Q  102 ccaaacaacttggttaa 118  Q
    |||| ||||||||||||    
T  14666220 ccaagcaacttggttaa 14666236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 13085585 - 13085470
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||| |||| ||||||| ||||||||||||| ||||||||| | |||||||||| || ||||| |||||||||||||||| | ||||||||| |    
T  13085585 tgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttggaaggagctcctcgccactggagc 13085486  T
Q  102 ccaaacaacttggtta 117  Q
    |||||||| |||||||    
T  13085485 ccaaacaagttggtta 13085470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 38922463 - 38922577
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||| ||||||||||||||||||| |||||||||| ||| ||||| | |||||||||| || | ||| |||||||||||||||| ||||||||||| |    
T  38922463 tgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagc 38922562  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  38922563 ccaagcaacttggtt 38922577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 4479343 - 4479455
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||| |  |||||||||| ||| ||| |||||| ||||| ||  ||||||||| |     
T  4479343 catgcgtagaggcatgcgcactggccaagcgttgttcccctgggaatcgaatccggtattctacaggtacgtccttgaaaggaacttcttgccactgaaa 4479442  T
Q  101 cccaaacaacttg 113  Q
    |||||||||||||    
T  4479443 cccaaacaacttg 4479455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 45521231 - 45521116
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||||||||||||||||  |||  |||||||||||| ||||| | |||||||||| || | ||||||||||||| || ||| |||||||||||     
T  45521231 catgcgtagaggcatgcgcactgatcaagtgttgttcccctgggaatcgaacccggtattccccgggtacatccttggaatgaactccttgccactggag 45521132  T
Q  101 cccaaacaacttggtt 116  Q
    ||||| ||||||||||    
T  45521131 cccaagcaacttggtt 45521116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1013024 - 1013142
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||| | ||||||||| ||||||||||| || ||||| | |||||||||| || ||||| |||||||||  ||||| |||||||||||    
T  1013024 catgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctccttgccactgga 1013123  T
Q  100 tcccaaacaacttggttaa 118  Q
     ||||| ||||||||||||    
T  1013124 gcccaagcaacttggttaa 1013142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 22810130 - 22810024
Alignment:
Q  13 catgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaactt 112  Q
    ||||||||||| |||| ||||||||||| | ||||| | |||| | |||||| ||||| |||||||||||||||| |||||||| || ||||||||||||    
T  22810130 catgcgcactgaccaagcgttgttccccagggaatcgaacccgatgttctccggatacgtccttggaaggagctccttgccactagagcccaaacaactt 22810031  T
Q  113 ggttaaa 119  Q
    |||||||    
T  22810030 ggttaaa 22810024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2467165 - 2467281
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| ||||| ||||||||||||||||  |||||||||| ||  |||| | |||||||||| || ||||| |||||||||||||||| |||||||||||    
T  2467165 catgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgga 2467264  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||| ||||||||||    
T  2467265 gcccaagcaacttggtt 2467281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3418560 - 3418676
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||| |||||||||||||||||  |||||||| ||| | |||| | |||| ||||| |||||||| |||||||||||||||| ||||||| |||    
T  3418560 catgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaacccgatattccccagatacgtccttggaaggagctccttgccacggga 3418659  T
Q  100 tcccaaacaacttggtt 116  Q
      |||||||||||||||    
T  3418660 gtccaaacaacttggtt 3418676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 10927669 - 10927550
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||||||| ||||||||| |||  ||||| | |||||||||| || | ||| |||||| ||| ||||| ||||||||| |    
T  10927669 catgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccgggtacgtccttgaaagaagctccttgccactgaa 10927570  T
Q  100 tcccaaacaacttggttaaa 119  Q
     ||||| |||||||||||||    
T  10927569 gcccaagcaacttggttaaa 10927550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 44893327 - 44893442
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| |||||||||| | |||||||||  || |||  | |||||||||| || | ||| |||||||||||||||| ||||||||||| |    
T  44893327 tgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagc 44893426  T
Q  102 ccaaacaacttggtta 117  Q
    ||||||||||||||||    
T  44893427 ccaaacaacttggtta 44893442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 17845792 - 17845680
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    |||||||||| ||| ||||| |||||  |||||||||||| ||||||| || | ||||| ||   |||||||||||||||||||| ||||||||||| ||    
T  17845792 tgcgtagaggaatgtgcactagccaagtgttgttcccctgggaatcaaaccag-tattccccgagtacatccttggaaggagctcattgccactggagcc 17845694  T
Q  103 caaacaacttggtt 116  Q
    ||||||||||||||    
T  17845693 caaacaacttggtt 17845680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43027368 - 43027251
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||| ||| ||| ||||||||| |||| ||||| | ||| |||||| ||| |||| | |||| || |||||| |||||||||||    
T  43027368 catgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaacccagtattccccaaatacgttcttgaaatgagctcattgccactgga 43027269  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  43027268 gcccaaacaacttggtta 43027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 18374073 - 18373961
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||| | || ||||||  || |||| ||| |||||| |||||| |||||| ||||    
T  18374073 catgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccggatatatctttggaatgagctccttgccattgga 18373974  T
Q  100 tcccaaacaactt 112  Q
     ||||||||||||    
T  18373973 gcccaaacaactt 18373961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 34846874 - 34846759
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||  ||||||||| |||||||| || || ||||| | |||||||||| || | ||| ||||||||| |||||| ||||||||||| |    
T  34846874 tgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtattc-ccgggtacgtccttggaatgagctccttgccactggagc 34846776  T
Q  102 ccaaacaacttggttaa 118  Q
    |||||||||||||||||    
T  34846775 ccaaacaacttggttaa 34846759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 13359083 - 13358969
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttccc-ctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||| |||||||||| |||| |||||||||  ||||||||| | ||||||||| ||| || ||||| ||||||||||||| || |||||| | |    
T  13359083 tgcgtagaggtatgcgcactgtccaagcgttgttccttctgagaatcgaacccggtattttccggacacatctttggaaggagctccttaccactgaagc 13358984  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  13358983 ccaagcaacttggtt 13358969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 17981502 - 17981392
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| |||||| |||  |||||||||| || ||||| | |||||||||  || | |||||||||||||||||||| ||||||||||| |    
T  17981502 tgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaacccggtatttcccgggtacatccttggaaggagctccttgccactggagc 17981403  T
Q  102 ccaaacaactt 112  Q
    |||| ||||||    
T  17981402 ccaagcaactt 17981392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 43032959 - 43032853
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccca 104  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||| |  ||| ||||  ||||||||||  ||||||||| ||| ||||||||||| ||||    
T  43032959 gtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaatccgatatttcccagatacatttttggaaggaactccttgccactggagccca 43032860  T
Q  105 aacaact 111  Q
    |||||||    
T  43032859 aacaact 43032853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 583875 - 583760
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggta-ttctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||| ||| ||||||| ||||  ||||| | ||||||| ||||| || ||| |||||||||| ||||| |||||||| ||    
T  583875 catgcgtagaggcatgcgcactggtcaagcgttgtt-ccctaggaatcgaacccggtatttctcgag-tacgtccttggaagtagctccttgccactaga 583778  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  583777 gcccaaacaacttggtta 583760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33401846 - 33401963
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||| |||||| |||  |||||||||| ||| |||| | |||||||||| ||   ||| |||||| ||||||||| |||||||||||    
T  33401846 catgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgtccttgaaaggagctccttgccactgga 33401945  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||| ||||    
T  33401946 gcccaaacaacttagtta 33401963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10535451 - 10535566
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||| ||| |||||||||||| ||| || ||||||||||| |||  | ||  ||||||  | ||||| |||||||||||||||| |||||||||||     
T  10535451 catgcgtggagacatgcgcactggtcaagcggtgttcccctgaaaattgaaccatgtattcctcggatacgtccttggaaggagctccttgccactggag 10535550  T
Q  101 cccaaacaacttggtt 116  Q
     |||||||||||||||    
T  10535551 tccaaacaacttggtt 10535566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 34613831 - 34613942
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaa 105  Q
    |||||||||||| |||||||| |||||||||| |||| ||||| | |||| ||||| || |||||    ||||||||||||| ||||||||||| |||||    
T  34613831 tagaggcatgcgtactggccagacgttgttcctcctgggaatcgaacccgatattccccggatacggttttggaaggagctcattgccactggagcccaa 34613930  T
Q  106 acaacttggtta 117  Q
    |||| |||||||    
T  34613931 acaatttggtta 34613942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 24837299 - 24837189
Alignment:
Q  7 tagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaa 105  Q
    ||||||||||  |||||||||| |||||||| ||||| ||||| | | |||||||| || | ||| | |||||||||||||| ||||||||||| |||||    
T  24837299 tagaggcatgaacactggccaagcgttgttctccctgggaatcgaacacggtattccccgggtacgtacttggaaggagctccttgccactggagcccaa 24837200  T
Q  106 acaacttggtt 116  Q
     ||||||||||    
T  24837199 gcaacttggtt 24837189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 29933831 - 29933719
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    ||||||||||||  |||||| |||  ||||||| ||||| ||||| | |||| |||||||| ||||||| ||| |||||||||| |||||||||||  ||    
T  29933831 cgtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaacccg-tattctccggatacattcttagaaggagctccttgccactggagtcc 29933733  T
Q  104 aaacaacttggtta 117  Q
    ||||||||||||||    
T  29933732 aaacaacttggtta 29933719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11785978 - 11785863
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||||| ||||| |||||||||| ||||||  ||||| |  ||||||||| || | ||| ||||||||| |||||| ||| |||||||     
T  11785978 catgcgtagaggcatgcacactgcccaaacgttgctccccttggaatcgaatccggtattccccgggtacgtccttggaatgagctccttg-cactggag 11785880  T
Q  101 cccaaacaacttggtta 117  Q
    ||||  |||||||||||    
T  11785879 cccatgcaacttggtta 11785863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 6940608 - 6940505
Alignment:
Q  14 atgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaactt 112  Q
    ||||||||| ||||| ||||||||| ||||  |||| | |||| |||| ||| ||||| ||||||||| |||||| || |||||||| ||||||||||||    
T  6940608 atgcgcactagccaagcgttgttccacctggaaatcgaacccgatattttccggatacctccttggaatgagctccttaccactggagcccaaacaactt 6940509  T
Q  113 ggtt 116  Q
    ||||    
T  6940508 ggtt 6940505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 7673706 - 7673817
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    ||||||||||||||| |||| |||||||||||||||||  |  ||| | |  | ||||| |||||||| |||||||||||||||| |||||||||||  |    
T  7673706 tgcgtagaggcatgcacactagccaaacgttgttcccccta--atcgaacttgatattccccagatacgtccttggaaggagctccttgccactgga-gc 7673802  T
Q  103 caaacaacttggtta 117  Q
    ||| |||||||||||    
T  7673803 caagcaacttggtta 7673817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33935782 - 33935899
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||| |||||||||||||||||||  ||||||| ||||  ||||| |  |||||||||    | |||||||||  ||||||||| |||| ||||||    
T  33935782 catgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtattccttgggtacatccttaaaaggagctccttgcaactgga 33935881  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  33935882 gcccaaacaacttggtta 33935899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8997591 - 8997707
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctga-gaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||| ||||||||| |||||| ||||||||||||||| | ||||| | | |||||||| ||  |||  |||||| |||||| || |||||||||||    
T  8997591 catgcgtataggcatgcgaactggcgaaacgttgttccccttaggaatcgaacacggtattccccgaatatgtccttgaaaggagttccttgccactgga 8997690  T
Q  100 tcccaaacaacttggtt 116  Q
      |||| ||||||||||    
T  8997691 gtccaagcaacttggtt 8997707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 24938664 - 24938726
Alignment:
Q  55 ggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtta 117  Q
    |||||||||| | ||  |||||||| ||||||| ||||||||||| |||||||||||||||||    
T  24938664 ggtattctccgggtatgtccttggagggagctccttgccactggagcccaaacaacttggtta 24938726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26570987 - 26570871
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||| |||| | |||||||||| |||||||||||  || |||  | |||| ||||  ||||||||||||||  |||  |||| |||||||| ||    
T  26570987 catgcgtagatgcatacacactggccaagcgttgttccccctaggaattgaacccgatatttcccagatacatccttaaaagtcgctccttgccactaga 26570888  T
Q  100 tcccaaacaacttggtt 116  Q
     ||||||||||||||||    
T  26570887 gcccaaacaacttggtt 26570871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8586986 - 8587025
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  8586986 catgcgtagaggtatgcgcactggccaagcgttgttcccc 8587025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 9395922 - 9395981
Alignment:
Q  57 tattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    ||||| ||||||||||||||| || |||||| |||||||||||  |||| ||||||||||    
T  9395922 tattccccagatacatccttgaaatgagctcattgccactggagtccaagcaacttggtt 9395981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9408348 - 9408410
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcc--cctgagaatcaaccccggtattc 61  Q
    ||||| |||||||||||||| ||||||||| |||||||  |||||||||||| | ||||||||    
T  9408348 catgcatagaggcatgcgcattggccaaacattgttccctcctgagaatcaaactcggtattc 9408410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 2209845 - 2209759
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttg-ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    |||||||| | ||||||||||| ||||| |||| ||||||| |||||||| |||| |||||  |||| || ||||| ||||||||||    
T  2209845 atgcgtagggacatgcgcactgaccaaatgttgtttcccctaagaatcaaacccgatattcctcagacacgtccttagaaggagctc 2209759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 18091461 - 18091347
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    |||||||||||||||||||||| |||||||||||   ||||||||  |    ||||||   | | | | |||||||||  ||||| ||||||||||| ||    
T  18091461 tgcgtagaggcatgcgcactggtcaaacgttgtttttctgagaattgaatttggtatttcacgggtgcgtccttggaataagctccttgccactggagcc 18091362  T
Q  103 caaacaacttggtta 117  Q
    |||||||||||||||    
T  18091361 caaacaacttggtta 18091347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 30903393 - 30903283
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaa 105  Q
    |||| |||||||||||||| ||| | ||||| |||||| |||| |  ||||||||| ||  |||| || ||||||| ||||| || | |||||| | |||    
T  30903393 gtagcggcatgcgcactggtcaagcattgtttccctgaaaatcgaatccggtattccccgaatacgtcattggaagaagctccttactactggagcgcaa 30903294  T
Q  106 acaacttggtt 116  Q
    |||||||||||    
T  30903293 acaacttggtt 30903283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6042884 - 6042823
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattc 61  Q
    |||||||  ||||||||||||||||||| ||||||||||| || ||||| | ||||||||||    
T  6042884 catgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtattc 6042823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 9905 - 9791
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||||||||| ||||||||||| ||  |||| |  |||||||||  |||||||||||||||||||||||| ||| |||||||      
T  9905 tgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattcctcagatacatccttggaaggagctccttgtcactggagt 9806  T
Q  102 ccaaacaacttggtt 116  Q
    | |||||||||||||    
T  9805 caaaacaacttggtt 9791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 7e-21; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 319484 - 319385
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaa-tcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||| |||||| ||||||||||||||| |||||||||||  |||| |||| |||||||||| || ||||| |||||||||||||||| |||||||||||    
T  319484 catgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactgga 319385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 628 - 516
Alignment:
Q  5 cgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatccc 103  Q
    ||||||||||||| |||||  |||  |||||||||| || ||||| | |||||||||| || | ||| |||||||||||||||| |||||||| || |||    
T  628 cgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagccc 529  T
Q  104 aaacaacttggtt 116  Q
    || ||||||||||    
T  528 aagcaacttggtt 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 412091 - 412190
Alignment:
Q  19 cactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggtta 117  Q
    ||||| |||| ||||||||||| || ||||| | | |||||||| || ||||| |||||||||||||||| | ||||||| | ||||| |||||||||||    
T  412091 cactgaccaagcgttgttccccctgtgaatcgaactcggtattccccggatacgtccttggaaggagctcatcgccactgaagcccaagcaacttggtta 412190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 271123 - 271237
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||| ||||||||||| |||| ||||||||||| || ||||| | |||| |||||||| | ||| |||||||||||||||| |||||||  || |    
T  271123 tgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccaccagagc 271222  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  271223 ccaagcaacttggtt 271237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 249354 - 249475
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagc---tctttgcca--ct 96  Q
    |||||||||| ||| ||||||| ||| |||| ||| ||||||||||| | || ||||||| ||| |||| ||||| ||||||||   || ||||||  ||    
T  249354 tgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaaggagctgatccttgccactct 249453  T
Q  97 ggatcccaaacaacttggttaa 118  Q
    ||| ||||||||||||||||||    
T  249454 ggagcccaaacaacttggttaa 249475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 250132 - 250176
Alignment:
Q  72 tccttggaaggagctctttgccactggatcccaaacaacttggtt 116  Q
    ||||||||| |||||| ||||||||||| ||||| ||||||||||    
T  250132 tccttggaatgagctccttgccactggagcccaagcaacttggtt 250176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6034 - 5917
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||||||||||| ||||||||||| |||||| ||||||  |||| | ||| |||||| || | |||  ||||| ||||||||| |||||||| ||     
T  6034 catgcgtagaggcatgtgcactggccaagcgttgtccccctggaaatcgaacccagtattccccgggtacgcccttgaaaggagctccttgccactagaa 5935  T
Q  101 cccaaacaacttggttaa 118  Q
    ||||| ||||||||||||    
T  5934 cccaagcaacttggttaa 5917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 12635 - 12520
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggta-ttctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||||||||||||||||||||||| ||| ||||||| ||||  ||||| | ||||||| ||||| || ||| |||||||||| ||||| |||||||| ||    
T  12635 catgcgtagaggcatgcgcactggtcaagcgttgtt-ccctaggaatcgaacccggtatttctcgag-tacgtccttggaagtagctccttgccactaga 12538  T
Q  100 tcccaaacaacttggtta 117  Q
     |||||||||||||||||    
T  12537 gcccaaacaacttggtta 12520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 8231 - 8151
Alignment:
Q  6 gtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagct 86  Q
    ||||||||||||||||||||||| |||||||||| || ||||| | |||||||||| || | ||| |||||||||||||||    
T  8231 gtagaggcatgcgcactggccaagcgttgttcccttgggaatcgaacccggtattccccgggtacgtccttggaaggagct 8151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8748 - 8873
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattc-tc--------cagatacatccttggaaggagctcttt 90  Q
    |||||||||||||| ||||||||||||| ||||||||||| || ||||| | |||||||||| ||        | ||||| |||||||||||||||| ||    
T  8748 catgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtattcctctgatacgtctgatacgtccttggaaggagctcctt 8847  T
Q  91 gccactggatcccaaacaacttggtt 116  Q
    ||||||||| ||||||||||||||||    
T  8848 gccactggagcccaaacaacttggtt 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 41104 - 40990
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccct-gagaatcaaccccggtattctccaga-tacatccttggaaggagctctttgccactggat 100  Q
    ||||||||||||||| ||||| ||||  ||||||||||| ||||||| | |||| ||||| || || ||| ||| |||||||||||| |||||||||||     
T  41104 tgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgatattc-cctgagtacgtccatggaaggagctccttgccactggag 41006  T
Q  101 cccaaacaacttggtt 116  Q
    ||||||||||||||||    
T  41005 cccaaacaacttggtt 40990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 25834 - 25949
Alignment:
Q  4 gcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcc 102  Q
    |||||||| |||||||||||||||| |||||||| ||||  ||||| | ||  |||||| ||   ||| | ||||||||||||||||||| |||||| ||    
T  25834 gcgtagagtcatgcgcactggccaagcgttgttctccctaggaatcgaaccttgtattccccgagtacgtacttggaaggagctctttgctactggagcc 25933  T
Q  103 caaacaacttggttaa 118  Q
    ||||||||||||||||    
T  25934 caaacaacttggttaa 25949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 155760 - 155797
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc 40  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  155760 tgcgtagaggcatgcgcactagccaagcgttgttcccc 155797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 18692 - 18595
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccctgag-aatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||| |||| ||||||||||| |||||||||||  || |||| | |||||| |||| | | |||||||||||||||||||| |||||||||||    
T  18692 tgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctccttgccactgga 18595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 68574 - 68463
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||||||||   |||| ||||||||||| || ||||| | |||| ||||  || | ||| |||||||||||||||| |||||||| || |    
T  68574 tgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatttcccgggtacgtccttggaaggagctccttgccactagagc 68478  T
Q  102 ccaaacaacttggtt 116  Q
    |||||||||||||||    
T  68477 ccaaacaacttggtt 68463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 1661 - 1776
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    ||||||||||||||||||||||||| || ||||||| ||||||  |||| | || ||||||| ||||  || || ||||||||||||| |||||||| ||    
T  1661 catgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaacctggtattccccaggcacgtcattggaaggagctccttgccacttga 1760  T
Q  100 tcccaaacaacttggt 115  Q
      |||| |||||||||    
T  1761 gtccaagcaacttggt 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 12730 - 12616
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| |||||||||| ||||||||| |||  ||||| | |||||||||| || |  || |||||||||||||||  |||||||| ||      
T  12730 tgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaacccggtattccccgggcacgtccttggaaggagcttcttgccactagagt 12631  T
Q  102 ccaaacaacttggtt 116  Q
    |||| ||||||||||    
T  12630 ccaagcaacttggtt 12616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 95028 - 95136
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggat 100  Q
    |||||||| ||||||||||||||| ||||||||||| ||  || |||| | || ||||||| || ||||| | |||||||||||||| |||||| ||||     
T  95028 catgcgtaaaggcatgcgcactggtcaaacgttgtttcctaga-aatcgaacctggtattccccggatactttcttggaaggagctccttgccattggag 95126  T
Q  101 cccaaacaac 110  Q
    ||||| ||||    
T  95127 cccaagcaac 95136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 7883 - 7961
Alignment:
Q  2 atgcgtagaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttgga 79  Q
    |||||||||||||||||||||||||||  ||| |||||| || ||||||| |||||||||| || | ||| ||||||||    
T  7883 atgcgtagaggcatgcgcactggccaagtgtttttccccttgggaatcaaacccggtattccccgggtacgtccttgga 7961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 186577 - 186467
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    |||||||||||||| |||||| |||||| || ||| |||||| |||| | |||| ||||||||| |||||||||| ||||| |||| |||||||| || |    
T  186577 tgcgtagaggcatgtgcactgaccaaacattattctccctga-aatcgaacccgatattctccaaatacatccttagaaggtgctccttgccactagagc 186479  T
Q  102 ccaaacaacttg 113  Q
     ||| |||||||    
T  186478 tcaaccaacttg 186467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42879 - 42978
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttc-ccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactgga 99  Q
    |||| |||||||||||||||||| |||| | |||||| ||||  ||||| | |||| ||||| |||| ||||| |||||||| ||||| |||||||||||    
T  42879 catgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaacccgatattccccaggtacattcttggaagtagctcgttgccactgga 42978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 9479 - 9380
Alignment:
Q  20 actggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggttaa 118  Q
    ||||||||| ||||||||||| || ||||| | |||||||||| |||  ||| |||||| ||||||||| |||  || ||| ||||| ||||||||||||    
T  9479 actggccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttgaaaggagctccttgttaccggagcccaagcaacttggttaa 9380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6917 - 6856
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattc 61  Q
    ||||||||||||||||||||||||||||  |||||| |||||| ||||| | ||||||||||    
T  6917 catgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattc 6856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 15358 - 15274
Alignment:
Q  35 ttcccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatcccaaacaacttggttaaa 119  Q
    ||||||||  |||| | |||||||||| || | ||| |||||| ||||||||| |||||||| || ||||||||||||| |||||    
T  15358 ttcccctggaaatcgaacccggtattccccgggtacttccttgtaaggagctccttgccactagagcccaaacaacttgtttaaa 15274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 26243 - 26127
Alignment:
Q  3 tgcgtagaggcatgcgcactggccaaacgttgtt-cccctgagaatcaaccccggtattctccagatacatccttggaaggagctctttgccactggatc 101  Q
    ||||||||||||||| |||||||||| ||||||| ||||||  |||| | ||| |||||| |||| ||  ||||| ||||||| |  |||||||| ||      
T  26243 tgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaacccagtattccccaggtatgtccttagaaggagtttcttgccactagagt 26144  T
Q  102 ccaaacaacttggttaa 118  Q
    |||| ||||||||||||    
T  26143 ccaagcaacttggttaa 26127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 65199 - 65239
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccct 41  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  65199 catgcgtagagacatgcgcactggccaagcgttgttcccct 65239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 72686 - 72608
Alignment:
Q  9 gaggcatgcgcactggccaaacgttgttcccc-tgagaatcaaccccggtattctccagatacatccttggaaggagctc 87  Q
    |||||||||||||||| ||| ||||||||||| ||  |||| | |||||||||| || ||||| ||||||||||||||||    
T  72686 gaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggtattc-cctgatacgtccttggaaggagctc 72608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25147 - 25098
Alignment:
Q  1 catgcgtagaggcatgcgcactggccaaacgttgttcccctgagaatcaa 50  Q
    ||||||||||  ||||||||||| ||||| ||||||||||||| ||||||    
T  25147 catgcgtagaaacatgcgcactgtccaaatgttgttcccctgaaaatcaa 25098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University