View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14833_low_10 (Length: 426)

Name: NF14833_low_10
Description: NF14833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14833_low_10
NF14833_low_10
[»] chr2 (46 HSPs)
chr2 (97-411)||(4579776-4580066)
chr2 (108-206)||(18298080-18298176)
chr2 (108-207)||(20709773-20709870)
chr2 (118-206)||(25192892-25192978)
chr2 (246-311)||(16126671-16126736)
chr2 (107-205)||(14551287-14551382)
chr2 (246-311)||(19228426-19228491)
chr2 (246-311)||(22705455-22705520)
chr2 (246-311)||(27665156-27665221)
chr2 (246-311)||(39904160-39904225)
chr2 (245-311)||(15411734-15411800)
chr2 (246-311)||(12016667-12016732)
chr2 (255-311)||(26229974-26230030)
chr2 (245-313)||(36731179-36731246)
chr2 (246-311)||(10690783-10690848)
chr2 (246-311)||(14377425-14377490)
chr2 (246-311)||(16919266-16919331)
chr2 (247-311)||(5583671-5583735)
chr2 (245-311)||(23932565-23932631)
chr2 (245-311)||(9747317-9747383)
chr2 (246-299)||(16123291-16123344)
chr2 (278-315)||(36909520-36909557)
chr2 (246-311)||(43388879-43388944)
chr2 (117-180)||(4281766-4281827)
chr2 (117-180)||(25995313-25995374)
chr2 (255-310)||(12919473-12919528)
chr2 (255-305)||(13351333-13351383)
chr2 (170-200)||(19246663-19246693)
chr2 (170-199)||(1292073-1292102)
chr2 (170-199)||(7487148-7487177)
chr2 (268-313)||(7757920-7757965)
chr2 (170-199)||(12449056-12449085)
chr2 (170-199)||(20661398-20661427)
chr2 (170-199)||(24183610-24183639)
chr2 (245-314)||(27865927-27865995)
chr2 (170-199)||(31783795-31783824)
chr2 (170-199)||(31783998-31784027)
chr2 (170-199)||(34726606-34726635)
chr2 (278-311)||(35729116-35729149)
chr2 (170-199)||(39355178-39355207)
chr2 (170-199)||(41345089-41345118)
chr2 (245-310)||(45302340-45302405)
chr2 (164-196)||(8149968-8150000)
chr2 (164-196)||(8154592-8154624)
chr2 (268-308)||(20566152-20566192)
chr2 (171-199)||(25575325-25575353)
[»] chr8 (68 HSPs)
chr8 (99-207)||(1208708-1208814)
chr8 (108-208)||(32987414-32987512)
chr8 (131-206)||(39021975-39022050)
chr8 (117-206)||(7058114-7058201)
chr8 (246-314)||(35678387-35678455)
chr8 (117-202)||(4836679-4836762)
chr8 (117-202)||(4842124-4842207)
chr8 (246-311)||(10129104-10129169)
chr8 (246-311)||(4080506-4080571)
chr8 (246-311)||(4084655-4084720)
chr8 (246-311)||(4102962-4103027)
chr8 (246-311)||(7140571-7140636)
chr8 (246-311)||(13328053-13328118)
chr8 (246-311)||(14816238-14816303)
chr8 (246-311)||(14829437-14829502)
chr8 (246-311)||(38527821-38527886)
chr8 (141-206)||(42433701-42433766)
chr8 (247-311)||(3306168-3306232)
chr8 (246-310)||(39701915-39701979)
chr8 (139-206)||(40012180-40012247)
chr8 (130-206)||(15260840-15260917)
chr8 (246-311)||(19343949-19344014)
chr8 (255-316)||(26682063-26682124)
chr8 (246-311)||(40210933-40210998)
chr8 (247-311)||(2161388-2161452)
chr8 (243-311)||(31812113-31812181)
chr8 (108-181)||(7614093-7614164)
chr8 (245-311)||(12131983-12132049)
chr8 (245-311)||(33514612-33514678)
chr8 (108-180)||(8550530-8550600)
chr8 (246-311)||(9743862-9743927)
chr8 (254-310)||(39703455-39703511)
chr8 (114-180)||(15181817-15181881)
chr8 (245-311)||(8284681-8284747)
chr8 (246-311)||(7750668-7750733)
chr8 (278-314)||(5298066-5298102)
chr8 (278-314)||(11977285-11977321)
chr8 (164-199)||(185883-185918)
chr8 (246-313)||(1203600-1203667)
chr8 (268-311)||(11117132-11117175)
chr8 (268-311)||(13496867-13496910)
chr8 (164-199)||(17656620-17656655)
chr8 (164-199)||(23397450-23397485)
chr8 (164-199)||(23567488-23567523)
chr8 (263-306)||(26364119-26364162)
chr8 (245-316)||(26834556-26834627)
chr8 (245-311)||(6818017-6818083)
chr8 (246-311)||(8140567-8140633)
chr8 (141-206)||(15227030-15227096)
chr8 (170-200)||(18161289-18161319)
chr8 (234-311)||(20514632-20514710)
chr8 (170-200)||(27506707-27506737)
chr8 (245-311)||(34249677-34249743)
chr8 (169-199)||(40022390-40022420)
chr8 (170-199)||(1149917-1149946)
chr8 (170-199)||(1672944-1672973)
chr8 (170-199)||(4835520-4835549)
chr8 (170-199)||(10237497-10237526)
chr8 (170-199)||(15227173-15227202)
chr8 (170-199)||(15809853-15809882)
chr8 (170-199)||(17792905-17792934)
chr8 (170-199)||(24473257-24473286)
chr8 (170-199)||(34633215-34633244)
chr8 (170-199)||(34647173-34647202)
chr8 (170-199)||(35301631-35301660)
chr8 (170-199)||(35448623-35448652)
chr8 (170-199)||(39657710-39657739)
chr8 (170-198)||(1209799-1209827)
[»] chr1 (66 HSPs)
chr1 (108-206)||(18056784-18056880)
chr1 (108-206)||(22348039-22348135)
chr1 (246-311)||(313750-313815)
chr1 (246-311)||(39150439-39150504)
chr1 (246-311)||(51382372-51382437)
chr1 (108-206)||(45889596-45889692)
chr1 (117-206)||(16115851-16115938)
chr1 (245-311)||(39627683-39627749)
chr1 (246-311)||(17919454-17919519)
chr1 (117-206)||(23320063-23320158)
chr1 (230-311)||(38539087-38539168)
chr1 (230-311)||(38561305-38561386)
chr1 (246-311)||(44918025-44918090)
chr1 (246-310)||(32716275-32716339)
chr1 (246-311)||(1502832-1502897)
chr1 (246-310)||(8062206-8062270)
chr1 (247-309)||(6754474-6754536)
chr1 (245-311)||(30171879-30171945)
chr1 (245-311)||(30187420-30187486)
chr1 (245-311)||(34801968-34802034)
chr1 (243-314)||(7520107-7520178)
chr1 (118-180)||(37639368-37639428)
chr1 (247-313)||(3121117-3121183)
chr1 (247-309)||(41624832-41624894)
chr1 (246-311)||(23591698-23591763)
chr1 (141-206)||(23921898-23921963)
chr1 (244-313)||(36578330-36578399)
chr1 (255-311)||(399544-399600)
chr1 (247-311)||(23576527-23576591)
chr1 (117-180)||(35198159-35198220)
chr1 (117-167)||(179647-179695)
chr1 (164-199)||(1395358-1395393)
chr1 (268-311)||(6520712-6520755)
chr1 (160-199)||(19897654-19897693)
chr1 (164-199)||(29945423-29945458)
chr1 (108-162)||(30802440-30802492)
chr1 (164-199)||(32143776-32143811)
chr1 (117-208)||(8402289-8402371)
chr1 (170-199)||(6314259-6314288)
chr1 (170-199)||(9041064-9041093)
chr1 (170-199)||(9628612-9628641)
chr1 (170-199)||(10974635-10974664)
chr1 (170-199)||(14229174-14229203)
chr1 (170-199)||(16976098-16976127)
chr1 (170-199)||(17811296-17811325)
chr1 (170-199)||(17893074-17893103)
chr1 (170-199)||(17893286-17893315)
chr1 (170-199)||(23817453-23817482)
chr1 (170-199)||(24636069-24636098)
chr1 (170-199)||(31763986-31764015)
chr1 (170-199)||(32595296-32595325)
chr1 (170-199)||(33156994-33157023)
chr1 (278-311)||(34050428-34050461)
chr1 (170-199)||(42134146-42134175)
chr1 (260-313)||(43317488-43317541)
chr1 (170-199)||(43452685-43452714)
chr1 (170-199)||(48762225-48762254)
chr1 (170-199)||(49936831-49936860)
chr1 (170-199)||(49992520-49992549)
chr1 (144-207)||(4097911-4097975)
chr1 (171-199)||(11422584-11422612)
chr1 (171-199)||(23920973-23921001)
chr1 (170-206)||(41033262-41033298)
chr1 (171-199)||(42133946-42133974)
chr1 (170-198)||(45849111-45849139)
chr1 (141-208)||(49936937-49937005)
[»] chr7 (63 HSPs)
chr7 (108-208)||(30428871-30428969)
chr7 (109-208)||(15974906-15975003)
chr7 (246-314)||(39757222-39757290)
chr7 (100-206)||(48690895-48690999)
chr7 (117-208)||(46024025-46024114)
chr7 (246-311)||(9331962-9332027)
chr7 (246-311)||(19889341-19889406)
chr7 (246-311)||(24250314-24250379)
chr7 (246-311)||(47120306-47120371)
chr7 (245-313)||(19868112-19868180)
chr7 (246-310)||(36548572-36548636)
chr7 (246-316)||(23982868-23982938)
chr7 (133-206)||(12279745-12279818)
chr7 (230-311)||(32117815-32117896)
chr7 (130-207)||(48305236-48305312)
chr7 (246-310)||(3561990-3562054)
chr7 (99-206)||(28396722-28396827)
chr7 (246-311)||(5909394-5909459)
chr7 (246-311)||(12086043-12086108)
chr7 (246-311)||(24463067-24463132)
chr7 (141-206)||(25778837-25778902)
chr7 (246-311)||(39869123-39869188)
chr7 (247-311)||(33342989-33343053)
chr7 (247-309)||(7170005-7170067)
chr7 (117-180)||(5757413-5757474)
chr7 (130-206)||(12279641-12279717)
chr7 (247-311)||(46290011-46290075)
chr7 (268-311)||(34270266-34270309)
chr7 (255-310)||(47457583-47457638)
chr7 (245-311)||(44806934-44807000)
chr7 (99-160)||(48691038-48691097)
chr7 (234-311)||(12624638-12624714)
chr7 (108-206)||(46573469-46573563)
chr7 (164-199)||(763834-763869)
chr7 (164-199)||(6620621-6620656)
chr7 (164-199)||(15973862-15973897)
chr7 (164-199)||(46572576-46572611)
chr7 (249-311)||(25709515-25709577)
chr7 (245-311)||(29398226-29398292)
chr7 (255-308)||(4161885-4161938)
chr7 (170-199)||(11732044-11732073)
chr7 (246-311)||(12650821-12650886)
chr7 (170-199)||(16933137-16933166)
chr7 (170-199)||(16938520-16938549)
chr7 (170-199)||(26945727-26945756)
chr7 (170-199)||(30884116-30884145)
chr7 (170-199)||(31660212-31660241)
chr7 (170-199)||(33798746-33798775)
chr7 (170-199)||(35737091-35737120)
chr7 (170-199)||(38837742-38837771)
chr7 (170-199)||(41911006-41911035)
chr7 (170-199)||(44426600-44426629)
chr7 (170-199)||(46004548-46004577)
chr7 (170-199)||(46358663-46358692)
chr7 (170-199)||(47340290-47340319)
chr7 (170-199)||(48692063-48692092)
chr7 (170-199)||(48830612-48830641)
chr7 (171-199)||(7845111-7845139)
chr7 (171-199)||(31365273-31365301)
chr7 (171-199)||(34227678-34227706)
chr7 (171-199)||(43742251-43742279)
chr7 (117-180)||(44141229-44141290)
chr7 (164-200)||(46004342-46004378)
[»] chr4 (86 HSPs)
chr4 (108-208)||(27764238-27764336)
chr4 (108-202)||(36621670-36621762)
chr4 (118-206)||(26447391-26447477)
chr4 (117-206)||(45255975-45256062)
chr4 (117-203)||(22181223-22181307)
chr4 (242-316)||(49332328-49332402)
chr4 (141-207)||(50643742-50643808)
chr4 (246-311)||(49228357-49228422)
chr4 (243-311)||(9326979-9327047)
chr4 (243-311)||(9373701-9373769)
chr4 (243-311)||(9382013-9382081)
chr4 (247-311)||(10658557-10658621)
chr4 (247-311)||(10872702-10872766)
chr4 (245-316)||(16667496-16667567)
chr4 (246-311)||(7349689-7349754)
chr4 (118-206)||(21097140-21097226)
chr4 (247-311)||(9759255-9759319)
chr4 (247-311)||(50352303-50352367)
chr4 (255-310)||(23553571-23553626)
chr4 (141-204)||(29826606-29826669)
chr4 (245-311)||(8736922-8736988)
chr4 (246-300)||(29190928-29190982)
chr4 (108-210)||(38485643-38485739)
chr4 (245-311)||(47327004-47327070)
chr4 (245-311)||(47341800-47341866)
chr4 (246-311)||(10389380-10389445)
chr4 (230-299)||(27756574-27756643)
chr4 (117-180)||(4168384-4168445)
chr4 (245-313)||(25843289-25843357)
chr4 (255-311)||(40049559-40049615)
chr4 (245-309)||(49181074-49181138)
chr4 (246-313)||(36000052-36000119)
chr4 (261-316)||(36968283-36968338)
chr4 (245-316)||(54495749-54495820)
chr4 (234-312)||(6875500-6875578)
chr4 (246-311)||(49650211-49650276)
chr4 (118-206)||(50563708-50563794)
chr4 (247-298)||(39876844-39876895)
chr4 (268-311)||(48910969-48911012)
chr4 (131-177)||(637883-637929)
chr4 (261-311)||(1377454-1377504)
chr4 (130-203)||(1729604-1729678)
chr4 (170-200)||(8157302-8157332)
chr4 (245-311)||(23545476-23545542)
chr4 (278-312)||(24243034-24243068)
chr4 (245-311)||(34941278-34941344)
chr4 (170-200)||(49492405-49492435)
chr4 (141-206)||(55765481-55765547)
chr4 (170-199)||(1492674-1492703)
chr4 (170-199)||(2124346-2124375)
chr4 (170-199)||(6841823-6841852)
chr4 (170-199)||(8165764-8165793)
chr4 (170-199)||(10473661-10473690)
chr4 (170-199)||(11786117-11786146)
chr4 (170-199)||(11798284-11798313)
chr4 (170-199)||(12722739-12722768)
chr4 (170-199)||(13635619-13635648)
chr4 (170-199)||(15051030-15051059)
chr4 (170-199)||(17109931-17109960)
chr4 (170-199)||(21995672-21995701)
chr4 (170-199)||(22180208-22180237)
chr4 (170-199)||(25715645-25715674)
chr4 (170-199)||(26577263-26577292)
chr4 (170-199)||(30358850-30358879)
chr4 (170-199)||(30597842-30597871)
chr4 (170-199)||(30779345-30779374)
chr4 (170-199)||(31763121-31763150)
chr4 (170-199)||(33819693-33819722)
chr4 (170-199)||(33883296-33883325)
chr4 (246-283)||(35911143-35911180)
chr4 (170-199)||(36924243-36924272)
chr4 (170-199)||(37059713-37059742)
chr4 (245-310)||(39539465-39539530)
chr4 (170-199)||(45256908-45256937)
chr4 (170-199)||(49425951-49425980)
chr4 (170-199)||(50644683-50644712)
chr4 (170-199)||(53441463-53441492)
chr4 (170-199)||(53865256-53865285)
chr4 (170-199)||(54895596-54895625)
chr4 (170-198)||(639007-639035)
chr4 (243-311)||(3085352-3085420)
chr4 (279-311)||(9971710-9971742)
chr4 (141-208)||(30597697-30597765)
chr4 (171-199)||(31762931-31762959)
chr4 (170-198)||(36309419-36309447)
chr4 (170-206)||(48077874-48077910)
[»] scaffold0097 (1 HSPs)
scaffold0097 (108-207)||(13612-13709)
[»] scaffold0238 (1 HSPs)
scaffold0238 (114-208)||(25207-25299)
[»] chr5 (57 HSPs)
chr5 (118-204)||(25017196-25017280)
chr5 (117-206)||(28070131-28070218)
chr5 (246-311)||(5958236-5958301)
chr5 (108-204)||(13362772-13362866)
chr5 (108-207)||(23335676-23335773)
chr5 (130-206)||(34329127-34329203)
chr5 (246-314)||(12642105-12642173)
chr5 (230-310)||(32020081-32020161)
chr5 (246-311)||(2795524-2795589)
chr5 (246-311)||(11636732-11636797)
chr5 (246-311)||(34578012-34578077)
chr5 (230-311)||(13516022-13516103)
chr5 (246-311)||(15190873-15190938)
chr5 (246-310)||(9184209-9184273)
chr5 (246-311)||(30328439-30328504)
chr5 (247-311)||(30839782-30839846)
chr5 (255-311)||(31366073-31366129)
chr5 (247-311)||(36597580-36597644)
chr5 (247-311)||(40512952-40513016)
chr5 (247-309)||(8103693-8103755)
chr5 (246-311)||(10665077-10665142)
chr5 (108-180)||(16668763-16668833)
chr5 (108-167)||(2827036-2827093)
chr5 (114-167)||(18465531-18465582)
chr5 (166-200)||(39086715-39086749)
chr5 (246-311)||(4047413-4047478)
chr5 (246-299)||(11375972-11376025)
chr5 (243-311)||(10658397-10658465)
chr5 (134-206)||(42512200-42512271)
chr5 (255-314)||(11360183-11360242)
chr5 (141-211)||(13552978-13553049)
chr5 (268-311)||(15241227-15241270)
chr5 (164-199)||(15559051-15559086)
chr5 (164-199)||(20134406-20134441)
chr5 (164-199)||(37456817-37456852)
chr5 (170-200)||(22830801-22830831)
chr5 (255-313)||(33072675-33072733)
chr5 (171-200)||(703731-703760)
chr5 (170-199)||(3340592-3340621)
chr5 (166-199)||(3340788-3340821)
chr5 (170-199)||(3883929-3883958)
chr5 (170-199)||(11660795-11660824)
chr5 (170-199)||(11660995-11661024)
chr5 (170-199)||(13553126-13553155)
chr5 (170-199)||(14394611-14394640)
chr5 (278-311)||(14466634-14466667)
chr5 (170-199)||(14940250-14940279)
chr5 (170-199)||(22695553-22695582)
chr5 (170-199)||(23155527-23155556)
chr5 (170-199)||(25545585-25545614)
chr5 (170-199)||(26637731-26637760)
chr5 (170-199)||(35662069-35662098)
chr5 (170-199)||(39861793-39861822)
chr5 (254-313)||(8716082-8716139)
chr5 (263-311)||(11250086-11250134)
chr5 (171-199)||(20134201-20134229)
chr5 (171-199)||(22672011-22672039)
[»] chr3 (65 HSPs)
chr3 (108-206)||(51362407-51362503)
chr3 (118-206)||(19385294-19385380)
chr3 (108-204)||(50754008-50754102)
chr3 (108-206)||(7045269-7045365)
chr3 (131-206)||(8718101-8718176)
chr3 (131-206)||(9069988-9070063)
chr3 (108-202)||(16277383-16277475)
chr3 (108-193)||(52987619-52987702)
chr3 (246-311)||(3863330-3863395)
chr3 (246-311)||(11610915-11610980)
chr3 (246-310)||(51339296-51339360)
chr3 (246-311)||(32553367-32553432)
chr3 (247-309)||(37444149-37444211)
chr3 (246-311)||(13495294-13495359)
chr3 (246-311)||(20938057-20938122)
chr3 (247-311)||(2571269-2571333)
chr3 (246-310)||(54621330-54621394)
chr3 (245-311)||(38389447-38389513)
chr3 (263-313)||(48240218-48240268)
chr3 (246-311)||(30214123-30214187)
chr3 (247-311)||(10307767-10307831)
chr3 (263-311)||(12515603-12515651)
chr3 (246-314)||(43750049-43750117)
chr3 (245-311)||(47386922-47386988)
chr3 (246-311)||(46845553-46845618)
chr3 (246-311)||(50364191-50364256)
chr3 (141-207)||(9106266-9106333)
chr3 (164-199)||(26662432-26662467)
chr3 (260-311)||(39365258-39365309)
chr3 (118-167)||(17627210-17627257)
chr3 (170-200)||(27446226-27446256)
chr3 (245-295)||(35094972-35095022)
chr3 (245-311)||(37055478-37055544)
chr3 (108-206)||(39099189-39099293)
chr3 (170-200)||(47924379-47924409)
chr3 (170-200)||(50755205-50755235)
chr3 (170-199)||(3475301-3475330)
chr3 (170-199)||(6097578-6097607)
chr3 (170-199)||(8036802-8036831)
chr3 (170-199)||(8719150-8719179)
chr3 (170-199)||(9071037-9071066)
chr3 (170-199)||(9106410-9106439)
chr3 (170-199)||(9595874-9595903)
chr3 (170-199)||(10986495-10986524)
chr3 (170-199)||(12974014-12974043)
chr3 (170-199)||(12974203-12974232)
chr3 (170-199)||(17620738-17620767)
chr3 (170-199)||(19284814-19284843)
chr3 (234-311)||(23638150-23638227)
chr3 (170-199)||(27068534-27068563)
chr3 (170-199)||(30947805-30947834)
chr3 (170-199)||(34562401-34562430)
chr3 (170-199)||(36185918-36185947)
chr3 (170-199)||(50416482-50416511)
chr3 (170-199)||(50416577-50416606)
chr3 (170-199)||(51361525-51361554)
chr3 (278-311)||(51618050-51618083)
chr3 (170-199)||(54379305-54379334)
chr3 (170-198)||(2941821-2941849)
chr3 (245-313)||(15863017-15863085)
chr3 (278-310)||(26291197-26291229)
chr3 (242-311)||(28992886-28992957)
chr3 (171-199)||(36185728-36185756)
chr3 (245-309)||(46492455-46492519)
chr3 (255-311)||(50204403-50204459)
[»] chr6 (44 HSPs)
chr6 (118-206)||(33346350-33346436)
chr6 (118-206)||(29157226-29157312)
chr6 (108-206)||(34399641-34399737)
chr6 (246-311)||(5363005-5363070)
chr6 (246-311)||(26602543-26602608)
chr6 (246-313)||(12454064-12454131)
chr6 (131-206)||(15034965-15035040)
chr6 (245-311)||(31791027-31791094)
chr6 (245-311)||(8977578-8977644)
chr6 (131-206)||(35119239-35119310)
chr6 (246-310)||(2830793-2830857)
chr6 (148-203)||(12394387-12394442)
chr6 (245-311)||(18332800-18332866)
chr6 (108-177)||(18611218-18611285)
chr6 (245-311)||(29863414-29863480)
chr6 (263-316)||(17552716-17552769)
chr6 (245-309)||(10887031-10887095)
chr6 (247-311)||(14228239-14228303)
chr6 (247-311)||(28943882-28943946)
chr6 (268-311)||(33017725-33017768)
chr6 (245-311)||(6016856-6016922)
chr6 (255-309)||(17596315-17596369)
chr6 (247-296)||(2086949-2086998)
chr6 (173-206)||(2759826-2759859)
chr6 (108-176)||(24737660-24737726)
chr6 (268-308)||(10345674-10345714)
chr6 (268-311)||(1814916-1814959)
chr6 (246-292)||(22974685-22974731)
chr6 (246-292)||(23813670-23813716)
chr6 (245-311)||(30623326-30623392)
chr6 (170-199)||(6900946-6900975)
chr6 (170-199)||(7765417-7765446)
chr6 (170-199)||(10588966-10588995)
chr6 (170-199)||(14237780-14237809)
chr6 (170-199)||(15493317-15493346)
chr6 (170-199)||(18755665-18755694)
chr6 (170-199)||(19284373-19284402)
chr6 (170-199)||(20522861-20522890)
chr6 (170-199)||(21385002-21385031)
chr6 (170-199)||(22857490-22857519)
chr6 (170-199)||(34869957-34869986)
chr6 (279-311)||(2086999-2087031)
chr6 (171-199)||(25119484-25119512)
chr6 (246-310)||(31169876-31169940)
[»] scaffold0544 (1 HSPs)
scaffold0544 (134-205)||(10668-10739)
[»] scaffold0061 (1 HSPs)
scaffold0061 (246-311)||(52891-52956)
[»] scaffold0017 (1 HSPs)
scaffold0017 (246-311)||(145678-145743)
[»] scaffold0011 (1 HSPs)
scaffold0011 (246-311)||(13086-13151)
[»] scaffold0337 (1 HSPs)
scaffold0337 (117-203)||(7020-7104)
[»] scaffold0189 (1 HSPs)
scaffold0189 (144-206)||(11193-11255)
[»] scaffold0194 (1 HSPs)
scaffold0194 (118-206)||(27607-27693)
[»] scaffold0727 (1 HSPs)
scaffold0727 (255-310)||(5692-5747)
[»] scaffold0111 (1 HSPs)
scaffold0111 (245-311)||(37226-37292)
[»] scaffold0338 (1 HSPs)
scaffold0338 (164-200)||(6520-6556)
[»] scaffold0053 (1 HSPs)
scaffold0053 (278-314)||(27306-27342)
[»] scaffold0009 (3 HSPs)
scaffold0009 (277-313)||(193376-193412)
scaffold0009 (246-311)||(43462-43528)
scaffold0009 (170-198)||(51908-51936)
[»] scaffold0581 (1 HSPs)
scaffold0581 (141-206)||(8421-8487)
[»] scaffold0571 (1 HSPs)
scaffold0571 (170-199)||(547-576)
[»] scaffold0516 (1 HSPs)
scaffold0516 (170-199)||(1261-1290)
[»] scaffold0249 (2 HSPs)
scaffold0249 (170-199)||(23546-23575)
scaffold0249 (170-198)||(23748-23776)
[»] scaffold0129 (1 HSPs)
scaffold0129 (170-199)||(20133-20162)
[»] scaffold0102 (1 HSPs)
scaffold0102 (170-199)||(33618-33647)
[»] scaffold0074 (1 HSPs)
scaffold0074 (170-199)||(24417-24446)
[»] scaffold1450 (1 HSPs)
scaffold1450 (171-199)||(752-780)
[»] scaffold0036 (1 HSPs)
scaffold0036 (246-310)||(94131-94195)


Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-109; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 97 - 411
Target Start/End: Original strand, 4579776 - 4580066
Alignment:
Q  97 agtgtagaaatgaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccat 196  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||            
T  4579776 agtgtagaaatgaagcataagattattacacgtgt--acactagatctgatggttgtaaagtgtttatgcatggtgcataaggatttcctta-------- 4579865  T
Q  197 aacttttgccaacagtgcagcccagcttcattataataataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgc 296  Q
                  |||||||| |||||||||||||||||||| | | |||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  4579866 --------------gtgcagccgagcttcattataataataattggtgtttttcaatgaaaagttactatatttagtttccttaacatgtgtaatattgc 4579951  T
Q  297 acatgttagacaaactctaaagtatatatatgaactttcttcaactttggatgtgaggtcaccttgagccaatgaggaaaagtgaagctatatatttatt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4579952 acatgttagacaaactctaaagtatatatatgaactttcttcaactttggatgtgaggtcaccttgagccaatgaggaaaagtgaagctatatatttatt 4580051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 18298080 - 18298176
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  18298080 gaagcctaggattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 18298176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 20709870 - 20709773
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcca 207  Q
    ||||| || ||||||||||  ||||||||||||||||||||||||| |||||||| ||||  ||| ||||||||||||||||||||||||||||||||||    
T  20709870 gaagcgtaggattattaca--tgtgtacactagatctgatggttgtgaagtgtttatgcacggtggataaggatttccttatgcaccataacttttgcca 20709773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 25192978 - 25192892
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  25192978 attattacacgtgt--acactagatctaatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 25192892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 16126671 - 16126736
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  16126671 ttttcaatgaaaaattactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 16126736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 14551287 - 14551382
Alignment:
Q  107 tgaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgc 205  Q
    |||||| || ||||||||||| |||  |||||||||||||||||||| |||||||| ||||  ||||||||| ||||||||||||||||||||||||||    
T  14551287 tgaagcctaggattattacacatgt--acactagatctgatggttgtgaagtgtttatgcac-gtgcataagaatttccttatgcaccataacttttgc 14551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 19228491 - 19228426
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  19228491 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 19228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 22705520 - 22705455
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  22705520 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 22705455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 27665156 - 27665221
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  27665156 ttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 27665221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 39904160 - 39904225
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  39904160 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 39904225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 15411734 - 15411800
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||||| ||||||| | |||||||||| |||||||||||||||||||||||    
T  15411734 tttttcaataaaaaattactacttttagttactttaacatgtgcaatattgcacatgttagacaaac 15411800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 12016732 - 12016667
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  12016732 ttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 12016667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 26229974 - 26230030
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  26229974 aaaaattactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 26230030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 36731246 - 36731179
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    |||||||||||||| |||||||||||||||| ||||||| ||| ||| |||||||||||||||||||||    
T  36731246 tttttcaatgaaaagttactacatttagttttcttaacaagtgcaat-ttgcacatgttagacaaactc 36731179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 10690848 - 10690783
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||| |||||||||||||||  |||||||  ||||||||||| |||||||||||||||||||||||    
T  10690848 tttttaatgaaaaattactaattttagttaacttaacatgtgcaatattgcacatgttagacaaac 10690783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 14377490 - 14377425
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| ||||||| ||||||| |||||||||||| |||||||||| ||||||||||||    
T  14377490 ttttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacgtgttagacaaac 14377425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 16919266 - 16919331
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||  |||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  16919266 ttttcaacaaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 16919331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 5583671 - 5583735
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  5583671 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 5583735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 23932631 - 23932565
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| ||| ||||||  ||||||| | |||||||||| |||||||||||||||||||||||    
T  23932631 tttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaac 23932565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 9747383 - 9747317
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| || | ||||||| |||||||   |||||||||||| |||||||||||||||||||||    
T  9747383 tttttcaataaatagttactacttttagttaatttaacatgtgtactattgcacatgttagacaaac 9747317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 16123344 - 16123291
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcaca 299  Q
    ||||||||||||| ||||| | ||||||| |||||||||||| |||||||||||    
T  16123344 ttttcaatgaaaagttacttcttttagttaccttaacatgtgcaatattgcaca 16123291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 36909520 - 36909557
Alignment:
Q  278 ttaacatgtgtaatattgcacatgttagacaaactcta 315  Q
    |||||||||||||||||||| |||||||||||||||||    
T  36909520 ttaacatgtgtaatattgcatatgttagacaaactcta 36909557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 43388879 - 43388944
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| ||||||| |||| ||||||| | |||| ||||| |||||||||||| ||||||||||    
T  43388879 ttttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaac 43388944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 4281766 - 4281827
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagga 180  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| | || ||| ||||||||    
T  4281766 gattattacacgtgt--acactagatctgatggttgtgaagtgtttatacagagtacataagga 4281827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 25995374 - 25995313
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagga 180  Q
    |||||||||||||||  |||||| ||||||||||||| |||| ||| |||| ||||||||||||    
T  25995374 gattattacacgtgt--acactaaatctgatggttgtgaagtatttatgcagagtgcataagga 25995313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 12919473 - 12919528
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    |||||||| ||| |||| || | |||||||||| ||||||||||||||||||||||    
T  12919473 aaaaattaatacttttaattgctttaacatgtgcaatattgcacatgttagacaaa 12919528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 13351333 - 13351383
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttag 305  Q
    |||||| ||||| ||||||| |||||||||||| |||||||||||| ||||    
T  13351333 aaaaataactacttttagttaccttaacatgtgcaatattgcacatattag 13351383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 200
Target Start/End: Complemental strand, 19246693 - 19246663
Alignment:
Q  170 gtgcataaggatttccttatgcaccataact 200  Q
    |||||||||||||||||||||||||||||||    
T  19246693 gtgcataaggatttccttatgcaccataact 19246663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 1292102 - 1292073
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  1292102 gtgcataaggatttccttatgcaccataac 1292073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 7487177 - 7487148
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  7487177 gtgcataaggatttccttatgcaccataac 7487148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 313
Target Start/End: Original strand, 7757920 - 7757965
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||    
T  7757920 tttagttaccttaacatgtacaattttgcacatgttagacaaactc 7757965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 12449085 - 12449056
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  12449085 gtgcataaggatttccttatgcaccataac 12449056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 20661427 - 20661398
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  20661427 gtgcataaggatttccttatgcaccataac 20661398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 24183610 - 24183639
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  24183610 gtgcataaggatttccttatgcaccataac 24183639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 27865927 - 27865995
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactct 314  Q
    ||||||||| |||||||| ||| ||||||||| ||||||| || ||  |||| |||||||||||||||||    
T  27865927 tttttcaat-aaaaattattacttttagtttctttaacatatgcaacgttgctcatgttagacaaactct 27865995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 31783824 - 31783795
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  31783824 gtgcataaggatttccttatgcaccataac 31783795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 31783998 - 31784027
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  31783998 gtgcataaggatttccttatgcaccataac 31784027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 34726635 - 34726606
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  34726635 gtgcataaggatttccttatgcaccataac 34726606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 35729149 - 35729116
Alignment:
Q  278 ttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| |||||||||||||||||||||||    
T  35729149 ttaacatgtgcaatattgcacatgttagacaaac 35729116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 39355178 - 39355207
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  39355178 gtgcataaggatttccttatgcaccataac 39355207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 41345118 - 41345089
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  41345118 gtgcataaggatttccttatgcaccataac 41345089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 45302405 - 45302340
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    ||||| ||| |||| ||| ||| ||| ||||| |||||||||||| ||||| ||||||||||||||    
T  45302405 ttttttaataaaaacttattactttttgtttctttaacatgtgtattattgtacatgttagacaaa 45302340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 8149968 - 8150000
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccat 196  Q
    ||||| |||||||||||||||||||||||||||    
T  8149968 tgcatggtgcataaggatttccttatgcaccat 8150000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 8154592 - 8154624
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccat 196  Q
    ||||| |||||||||||||||||||||||||||    
T  8154592 tgcatggtgcataaggatttccttatgcaccat 8154624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 20566152 - 20566192
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagaca 308  Q
    ||||||| | |||||||||| ||||||||||||||||||||    
T  20566152 tttagttactttaacatgtgcaatattgcacatgttagaca 20566192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 25575353 - 25575325
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  25575353 tgcataaggatttccttatgcaccataac 25575325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 1208814 - 1208708
Alignment:
Q  99 tgtagaaatgaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataa 198  Q
    |||||| ||||||| || |||||||||||||||  ||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  1208814 tgtagagatgaagcctaggattattacacgtgt--acactagatcttatggttgtaaagtgtttatgcacggtgcataaggatttccttatgcaccataa 1208717  T
Q  199 cttttgcca 207  Q
    |||||||||    
T  1208716 cttttgcca 1208708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 32987414 - 32987512
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcca 207  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  32987414 gaagcctaggattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcca 32987511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 39022050 - 39021975
Alignment:
Q  131 tgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||||||||| |||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  39022050 tgtacactagatctgatgattgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 39021975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 7058201 - 7058114
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||||||  |||||||||| ||||||||| |||||||| ||||  ||||||||| |||||||||||||||||||||||||||    
T  7058201 gattattacacgtgt--acactagatcggatggttgtgaagtgtttatgcacggtgcataagtatttccttatgcaccataacttttgcc 7058114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 35678387 - 35678455
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactct 314  Q
    ||||||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  35678387 ttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaactct 35678455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 4836679 - 4836762
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttt 202  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| ||||  ||||||||| ||||| |||||||||||||||||    
T  4836679 gattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataagcatttctttatgcaccataacttt 4836762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 4842124 - 4842207
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttt 202  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| ||||  ||||||||| ||||| |||||||||||||||||    
T  4842124 gattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataagcatttctttatgcaccataacttt 4842207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 10129169 - 10129104
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||    
T  10129169 ttttcaatgaaaaattactaattttagttaccttaacatgtgcaatattgcacatgttagacaaac 10129104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 4080506 - 4080571
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| |||| ||||||||||||||| |||||| ||||||||||||||||    
T  4080506 ttttcaatgaaaagttactacttttactttccttaacatgtgcaatattacacatgttagacaaac 4080571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 4084655 - 4084720
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| |||| ||||||||||||||| |||||| ||||||||||||||||    
T  4084655 ttttcaatgaaaagttactacttttactttccttaacatgtgcaatattacacatgttagacaaac 4084720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 4102962 - 4103027
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| |||| ||||||||||||||| |||||| ||||||||||||||||    
T  4102962 ttttcaatgaaaagttactacttttactttccttaacatgtgcaatattacacatgttagacaaac 4103027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 7140571 - 7140636
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  7140571 ttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 7140636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 13328053 - 13328118
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| ||||||||| || |||||||||||||||||||||||    
T  13328053 ttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 13328118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 14816238 - 14816303
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  14816238 ttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaac 14816303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 14829502 - 14829437
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  14829502 ttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaac 14829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 38527886 - 38527821
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||| ||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  38527886 ttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 38527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 42433766 - 42433701
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||||||||||    
T  42433766 atctgatggttgtgaagtgcttatgcacggtgcataaggatttccttatgcaccataacttttgcc 42433701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 3306168 - 3306232
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  3306168 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 3306232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 39701915 - 39701979
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    ||||||| ||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  39701915 ttttcaacgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaa 39701979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 40012180 - 40012247
Alignment:
Q  139 agatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||| |||||||||||||| ||| ||||| |||||||||||  ||||||||||||||||||||||||    
T  40012180 agatccgatggttgtaaagtctttatgcatggtgcataaggaaatccttatgcaccataacttttgcc 40012247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 15260840 - 15260917
Alignment:
Q  130 gtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagg-atttccttatgcaccataacttttgcc 206  Q
    ||||||||||||| |||||||||| |||||||| ||||  |||||||||| |  ||||||||||||||||||||||||    
T  15260840 gtgtacactagatttgatggttgtgaagtgtttatgcacggtgcataaggaaaatccttatgcaccataacttttgcc 15260917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 19343949 - 19344014
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||| ||| |||||||||||| |||||||||||||| ||||||||    
T  19343949 ttttcaatgaaaagttactacttttggttaccttaacatgtgcaatattgcacatgtaagacaaac 19344014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 26682124 - 26682063
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactctaa 316  Q
    |||||||||||| |||||||   |||||||||| ||||||||||||||||||||||||||||    
T  26682124 aaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaactctaa 26682063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 40210933 - 40210998
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||| ||| ||||||| ||||||||| || |||||||||||||||||||||||    
T  40210933 ttttcaatgaaaagttaatacttttagttaccttaacatatgcaatattgcacatgttagacaaac 40210998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 2161452 - 2161388
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  2161452 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2161388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 31812181 - 31812113
Alignment:
Q  243 tatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||| |||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||||    
T  31812181 tatttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 31812113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 7614164 - 7614093
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggat 181  Q
    ||||| || |||||||||||||||  ||| |||||||||||||||| |||||||| ||||| ||||||||||||    
T  7614164 gaagcctatgattattacacgtgt--acattagatctgatggttgtgaagtgtttatgcatggtgcataaggat 7614093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 12132049 - 12131983
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||| || |||| ||||||||| |||||||||| ||| |||||||||||||||||||    
T  12132049 tttttcaataaaaagttgctacttttagtttctttaacatgtgcaatgttgcacatgttagacaaac 12131983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 33514612 - 33514678
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||  || |||| |||||||||||||||||||| ||||||||||||||||| |||||    
T  33514612 tttttcaataaaaggttgctacttttagtttccttaacatgtgcaatattgcacatgttaggcaaac 33514678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 8550600 - 8550530
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagga 180  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| ||||  |||||||||||    
T  8550600 gaagcttatgattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataagga 8550530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 9743927 - 9743862
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||||||||||| |||||||  |||||||||   |||||||||||||||||||||||    
T  9743927 ttttcaataaaaaattactacttttagttgtcttaacatgcacaatattgcacatgttagacaaac 9743862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 39703511 - 39703455
Alignment:
Q  254 gaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    ||||| ||||||| ||||||| |||||||||||| ||||||||||| ||||||||||    
T  39703511 gaaaagttactacttttagttaccttaacatgtgcaatattgcacacgttagacaaa 39703455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 15181881 - 15181817
Alignment:
Q  114 taagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagga 180  Q
    ||||||||||||||||||  ||||||||||||||| |||| |||||||| ||||  |||||||||||    
T  15181881 taagattattacacgtgt--acactagatctgatgcttgtgaagtgtttatgcagggtgcataagga 15181817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 8284681 - 8284747
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||| ||| |||| ||||||| ||||||| | |||||||||| |||| ||||||||||||||||||    
T  8284681 ttttttaataaaaagttactacttttagttgctttaacatgtgcaatactgcacatgttagacaaac 8284747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 7750733 - 7750668
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| || |||| |||||||   |||||||||| |||||||||||||||||||||||    
T  7750733 ttttcaataaaaagttgctacttttagttgttttaacatgtgcaatattgcacatgttagacaaac 7750668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 5298102 - 5298066
Alignment:
Q  278 ttaacatgtgtaatattgcacatgttagacaaactct 314  Q
    |||||||||||||||||||||||||| ||||||||||    
T  5298102 ttaacatgtgtaatattgcacatgtttgacaaactct 5298066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 11977285 - 11977321
Alignment:
Q  278 ttaacatgtgtaatattgcacatgttagacaaactct 314  Q
    |||||||||||||| ||||||||||||||||||||||    
T  11977285 ttaacatgtgtaatgttgcacatgttagacaaactct 11977321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 185918 - 185883
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    |||| |||||||||||||||||||||||||||||||    
T  185918 tgcagagtgcataaggatttccttatgcaccataac 185883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 1203667 - 1203600
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    ||||||||||||| |||||   |||||||  ||||| ||||| ||||||||| |||||||||||||||    
T  1203667 ttttcaatgaaaagttactttttttagttatcttaatatgtgcaatattgcatatgttagacaaactc 1203600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 11117132 - 11117175
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| | |||||||||| |||||||||||||||||||||||    
T  11117132 tttagttgctttaacatgtgcaatattgcacatgttagacaaac 11117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 13496867 - 13496910
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| | |||||||||| |||||||||||||||||||||||    
T  13496867 tttagttcctttaacatgtgcaatattgcacatgttagacaaac 13496910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 17656655 - 17656620
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    |||| |||||||||||||||||||||||||||||||    
T  17656655 tgcagagtgcataaggatttccttatgcaccataac 17656620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 23397450 - 23397485
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    ||||| ||||||||||||||||||||||||||||||    
T  23397450 tgcatggtgcataaggatttccttatgcaccataac 23397485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 23567523 - 23567488
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    |||| |||||||||||||||||||||||||||||||    
T  23567523 tgcagagtgcataaggatttccttatgcaccataac 23567488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 26364119 - 26364162
Alignment:
Q  263 ctacatttagtttccttaacatgtgtaatattgcacatgttaga 306  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||    
T  26364119 ctacttttagttaccttaacatgtgcaatattgcacatgttaga 26364162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 26834627 - 26834556
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactctaa 316  Q
    ||||||||| |||||||||||| ||||| |  |||| |||||| ||| ||||| ||||||||||||| ||||    
T  26834627 tttttcaataaaaaattactacttttagatatcttagcatgtgcaatgttgcatatgttagacaaaccctaa 26834556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 6818083 - 6818017
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| ||| ||||||  ||||||| | ||||||| |  |||||||||||||||||||||||    
T  6818083 tttttcaatgtaaagttactatttttagttcctttaacatatacaatattgcacatgttagacaaac 6818017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 8140633 - 8140567
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgc-acatgttagacaaac 311  Q
    ||||||||||||||| ||||| ||||||| |||||||||||  |||||| | | |||||||||||||    
T  8140633 ttttcaatgaaaaatcactacttttagttgccttaacatgtaaaatattacaaaatgttagacaaac 8140567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 15227096 - 15227030
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataagg-atttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||| |||||| ||||  |||||||||| | |  ||||||||||||||||||||||    
T  15227096 atctgatggttgtaatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 15227030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 200
Target Start/End: Complemental strand, 18161319 - 18161289
Alignment:
Q  170 gtgcataaggatttccttatgcaccataact 200  Q
    |||||||||||||||||||||||||||||||    
T  18161319 gtgcataaggatttccttatgcaccataact 18161289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 20514710 - 20514632
Alignment:
Q  234 aataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaata-ttgcacatgttagacaaac 311  Q
    |||||| | ||||||||||| | |||||||||| || |||| | ||| |||||| |||| |||||||||||||||||||    
T  20514710 aataattggtatttttcaataagaaattactactttaagttgctttaccatgtgcaatatttgcacatgttagacaaac 20514632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 200
Target Start/End: Complemental strand, 27506737 - 27506707
Alignment:
Q  170 gtgcataaggatttccttatgcaccataact 200  Q
    |||||||||||||||||||||||||||||||    
T  27506737 gtgcataaggatttccttatgcaccataact 27506707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 34249743 - 34249677
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||||||||| ||| ||||| |  |||| |||||  || ||||||||||||||||||||    
T  34249743 tttttcaatgaaaaattaatacttttagctgtcttatcatgtacaacattgcacatgttagacaaac 34249677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 199
Target Start/End: Complemental strand, 40022420 - 40022390
Alignment:
Q  169 agtgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||||    
T  40022420 agtgcataaggatttccttatgcaccataac 40022390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 1149946 - 1149917
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  1149946 gtgcataaggatttccttatgcaccataac 1149917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 1672944 - 1672973
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  1672944 gtgcataaggatttccttatgcaccataac 1672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 4835549 - 4835520
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  4835549 gtgcataaggatttccttatgcaccataac 4835520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 10237497 - 10237526
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  10237497 gtgcataaggatttccttatgcaccataac 10237526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 15227173 - 15227202
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  15227173 gtgcataaggatttccttatgcaccataac 15227202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 15809853 - 15809882
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  15809853 gtgcataaggatttccttatgcaccataac 15809882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 17792905 - 17792934
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  17792905 gtgcataaggatttccttatgcaccataac 17792934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 24473257 - 24473286
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  24473257 gtgcataaggatttccttatgcaccataac 24473286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 34633244 - 34633215
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  34633244 gtgcataaggatttccttatgcaccataac 34633215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 34647202 - 34647173
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  34647202 gtgcataaggatttccttatgcaccataac 34647173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 35301660 - 35301631
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  35301660 gtgcataaggatttccttatgcaccataac 35301631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 35448623 - 35448652
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  35448623 gtgcataaggatttccttatgcaccataac 35448652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 39657739 - 39657710
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  39657739 gtgcataaggatttccttatgcaccataac 39657710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 198
Target Start/End: Original strand, 1209799 - 1209827
Alignment:
Q  170 gtgcataaggatttccttatgcaccataa 198  Q
    |||||||||||||||||||||||||||||    
T  1209799 gtgcataaggatttccttatgcaccataa 1209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 18056880 - 18056784
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  18056880 gaagcctaggattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 18056784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 22348135 - 22348039
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||| || |||||||||||||||  ||||||||| |||||||||| |||||||| |||   |||||||||||||||||||||||||||||||||||||    
T  22348135 gaagcctaggattattacacgtgt--acactagatatgatggttgtgaagtgtttatgcgcggtgcataaggatttccttatgcaccataacttttgcc 22348039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 313815 - 313750
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  313815 ttttcaatcaaaaattactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 313750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 39150439 - 39150504
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  39150439 ttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 39150504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 51382437 - 51382372
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  51382437 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 51382372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 45889692 - 45889596
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||| |||||||||||||| ||| |||  ||||||||||||||||||| ||||| ||||  ||| ||||| |||||||||||||||||| ||||||||    
T  45889692 gaagcctaagattattacacatgtatac--tagatctgatggttgtaaaatgtttatgcacggtggataagaatttccttatgcaccataccttttgcc 45889596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 16115938 - 16115851
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||||||  ||| ||||| |||||||||| |||||||| ||||  |||||||||||||||||||||||  ||||||||||||    
T  16115938 gattattacacgtgt--acattagatttgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcatgataacttttgcc 16115851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 39627683 - 39627749
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||| || |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  39627683 tttttcaattaaaagttgctatttttagtttccttaacatgtgtaatattgcacatgttagacaaac 39627749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 17919519 - 17919454
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||  |||||||||||||||||||||||    
T  17919519 ttttcaatgaaaagttactacttttagttgccttaacatgtacaatattgcacatgttagacaaac 17919454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 23320063 - 23320158
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcat--------agtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| |||||        || |||||||||||||||||||||||||||||||||||    
T  23320063 gattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcatgatacctaagagcataaggatttccttatgcaccataacttttgcc 23320158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 38539168 - 38539087
Alignment:
Q  230 taataataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| | | |||| ||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  38539168 taataataattggtgttttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattgcacatgttagataaac 38539087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 38561386 - 38561305
Alignment:
Q  230 taataataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| | | |||| ||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  38561386 taataataattggtgttttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattgcacatgttagataaac 38561305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 44918090 - 44918025
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  44918090 ttttcaataaaaatttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 44918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 32716275 - 32716339
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    ||||||| ||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  32716275 ttttcaacgaaaagttacttcatttagttaccttaacatgtgcaatattgcacatgttagacaaa 32716339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 1502832 - 1502897
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| || |||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  1502832 ttttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 1502897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 8062270 - 8062206
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    ||||||||||||| ||||||| ||||||| |||||||||||  |||||||||||||||| |||||    
T  8062270 ttttcaatgaaaagttactacttttagttaccttaacatgttcaatattgcacatgttaaacaaa 8062206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 6754536 - 6754474
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaa 309  Q
    ||||||| |||| ||||||  ||||||| |||||||||||| |||||||||||||||||||||    
T  6754536 tttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 6754474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 30171945 - 30171879
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||||    
T  30171945 tttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 30171879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 30187486 - 30187420
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||||    
T  30187486 tttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 30187420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 34802034 - 34801968
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||||    
T  34802034 tttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 34801968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 7520107 - 7520178
Alignment:
Q  243 tatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactct 314  Q
    ||||||| ||| |||| ||||||| ||||||| | |||||||||| |||||||||||| |||| ||||||||    
T  7520107 tattttttaataaaaatttactacttttagttgctttaacatgtgcaatattgcacattttagtcaaactct 7520178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 37639428 - 37639368
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagga 180  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| ||||  |||||||||||    
T  37639428 attattacacgtgt--acactagatctgatggttgtgaagtgtttatgcagggtgcataagga 37639368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 3121183 - 3121117
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    ||||||| |||| || |||| |||| || ||||||||| ||||||||||||||| ||||||||||||    
T  3121183 tttcaataaaaacttgctacttttaattaccttaacatatgtaatattgcacatattagacaaactc 3121117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 41624894 - 41624832
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaa 309  Q
    ||||||| |||| ||||||  ||||||| | |||||||||| |||||||||||||||||||||    
T  41624894 tttcaataaaaagttactatttttagttgctttaacatgtgcaatattgcacatgttagacaa 41624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 23591763 - 23591698
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| ||||||  ||||||| | |||||||||| ||| |||||||||||||||||||    
T  23591763 ttttcaataaaaacttactaattttagttgctttaacatgtgcaatgttgcacatgttagacaaac 23591698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 23921898 - 23921963
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||| | ||||| || ||||   ||||||||||||||||||||||| ||||||||||||    
T  23921898 atctgatggttatgaagtgcttatgcacgatgcataaggatttccttatgcacaataacttttgcc 23921963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 36578399 - 36578330
Alignment:
Q  244 atttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    |||||| ||| | |||||||||| |||| || | |||||||||| |||||||||||||||||| ||||||    
T  36578399 attttttaataagaaattactacttttaattgctttaacatgtgcaatattgcacatgttagataaactc 36578330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 399544 - 399600
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||| ||||||| |  ||||||||| |||||||| ||||||||||||||    
T  399544 aaaaattactacgtttagttgctataacatgtgcaatattgcgcatgttagacaaac 399600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 23576527 - 23576591
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| ||  ||| ||||||| |||||||||||| ||||||||| |||||||||||||    
T  23576527 tttcaataaaaacttgttacttttagttaccttaacatgtgcaatattgcagatgttagacaaac 23576591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 35198159 - 35198220
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagga 180  Q
    |||||||||||||||  |||||||||||||||| ||| |||||||| ||||  |||||||||||    
T  35198159 gattattacacgtgt--acactagatctgatggctgtgaagtgtttatgcagggtgcataagga 35198220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 179695 - 179647
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgca 167  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| ||||    
T  179695 gattattacacgtgt--acactagatctgatggttgtgaagtgtttatgca 179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 1395358 - 1395393
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    ||||| ||||||||||||||||||||||||||||||    
T  1395358 tgcatggtgcataaggatttccttatgcaccataac 1395393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 6520755 - 6520712
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||    
T  6520755 tttagtttctttaacctgtgtaatattgtacatgttagacaaac 6520712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 19897693 - 19897654
Alignment:
Q  160 tttctgcatagtgcataaggatttccttatgcaccataac 199  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  19897693 tttctgcacggtgcataaggatttccttatgcaccataac 19897654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 29945423 - 29945458
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    |||| |||||||||||||||||||||||||||||||    
T  29945423 tgcagagtgcataaggatttccttatgcaccataac 29945458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 30802492 - 30802440
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgttt 162  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| || |||||    
T  30802492 gaagcctaagattattacacgtgt--acactagatctgatggttgtgaaatgttt 30802440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 32143776 - 32143811
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    |||| |||||||||||||||||||||||||||||||    
T  32143776 tgcagagtgcataaggatttccttatgcaccataac 32143811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 8402289 - 8402371
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgccaa 208  Q
    ||||||||||  ||||||||||||||||||||||| | ||||||||        |||||||  |||||||||| ||||||||||||||||||    
T  8402289 gattattaca--tgtgtacactagatctgatggttatgaagtgttt-------atgcataaaaatttccttatccaccataacttttgccaa 8402371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 6314259 - 6314288
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  6314259 gtgcataaggatttccttatgcaccataac 6314288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 9041064 - 9041093
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  9041064 gtgcataaggatttccttatgcaccataac 9041093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 9628612 - 9628641
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  9628612 gtgcataaggatttccttatgcaccataac 9628641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 10974664 - 10974635
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  10974664 gtgcataaggatttccttatgcaccataac 10974635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 14229203 - 14229174
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  14229203 gtgcataaggatttccttatgcaccataac 14229174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 16976098 - 16976127
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  16976098 gtgcataaggatttccttatgcaccataac 16976127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 17811296 - 17811325
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  17811296 gtgcataaggatttccttatgcaccataac 17811325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 17893103 - 17893074
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  17893103 gtgcataaggatttccttatgcaccataac 17893074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 17893286 - 17893315
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  17893286 gtgcataaggatttccttatgcaccataac 17893315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 23817453 - 23817482
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  23817453 gtgcataaggatttccttatgcaccataac 23817482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 24636069 - 24636098
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  24636069 gtgcataaggatttccttatgcaccataac 24636098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 31763986 - 31764015
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  31763986 gtgcataaggatttccttatgcaccataac 31764015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 32595296 - 32595325
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  32595296 gtgcataaggatttccttatgcaccataac 32595325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 33157023 - 33156994
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  33157023 gtgcataaggatttccttatgcaccataac 33156994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 34050428 - 34050461
Alignment:
Q  278 ttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| |||||||||||||||||||||||    
T  34050428 ttaacatgtgcaatattgcacatgttagacaaac 34050461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 42134146 - 42134175
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  42134146 gtgcataaggatttccttatgcaccataac 42134175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 43317541 - 43317488
Alignment:
Q  260 ttactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    ||||||| ||||||| | |||||||||  ||||||||||||||| |||||||||    
T  43317541 ttactacttttagttgctttaacatgtacaatattgcacatgtttgacaaactc 43317488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 43452685 - 43452714
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  43452685 gtgcataaggatttccttatgcaccataac 43452714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 48762254 - 48762225
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  48762254 gtgcataaggatttccttatgcaccataac 48762225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 49936860 - 49936831
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  49936860 gtgcataaggatttccttatgcaccataac 49936831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 49992549 - 49992520
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  49992549 gtgcataaggatttccttatgcaccataac 49992520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 4097911 - 4097975
Alignment:
Q  144 tgatggttgtaaagtgtttctgcatagtgcataaggatttc-cttatgcaccataacttttgcca 207  Q
    |||||||||| |||||||| ||||  |||||||||||  |  |||||||||||||||||||||||    
T  4097911 tgatggttgtgaagtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcca 4097975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 11422584 - 11422612
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  11422584 tgcataaggatttccttatgcaccataac 11422612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 23921001 - 23920973
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  23921001 tgcataaggatttccttatgcaccataac 23920973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 41033298 - 41033262
Alignment:
Q  170 gtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||  ||||||||||||||||||||||||    
T  41033298 gtgcataaggaaatccttatgcaccataacttttgcc 41033262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 42133974 - 42133946
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  42133974 tgcataaggatttccttatgcaccataac 42133946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 45849139 - 45849111
Alignment:
Q  170 gtgcataaggatttccttatgcaccataa 198  Q
    |||||||||||||||||||||||||||||    
T  45849139 gtgcataaggatttccttatgcaccataa 45849111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 49936937 - 49937005
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataaggatttc-cttatgcaccataacttttgccaa 208  Q
    ||||||||||||| | |||||| ||||  |||||||||||  |  ||||||||||||||||||||||||    
T  49936937 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgccaa 49937005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 30428969 - 30428871
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcca 207  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  30428969 gaagcctaggattattacacgtgt--acactagatctgatggttgtgaaatgtttatgcacggtgcataaggatttccttatgcaccataacttttgcca 30428872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 15974906 - 15975003
Alignment:
Q  109 aagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgccaa 208  Q
    |||| |||||||||||||  ||||||||||| || |||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  15974906 aagcctaagattattaca--tgtgtacactaaatatgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgccaa 15975003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 39757222 - 39757290
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactct 314  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  39757222 ttttcaatgaaaaattactacttttagttaccttaacatgtgcaatattgcacatgttagacaaactct 39757290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 48690999 - 48690895
Alignment:
Q  100 gtagaaatgaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataac 199  Q
    ||||| ||||||| || |||||||||||||||  ||||||||| |||||||||| || ||||| ||||  ||||||||||||||| ||||||||||||||    
T  48690999 gtagagatgaagcctatgattattacacgtgt--acactagatttgatggttgtgaactgtttatgcacggtgcataaggatttctttatgcaccataac 48690902  T
Q  200 ttttgcc 206  Q
    |||||||    
T  48690901 ttttgcc 48690895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 46024114 - 46024025
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgccaa 208  Q
    |||||||||||||||  |||||| ||||||||||||| |||||||| ||||  |||||||||||||| ||| ||||||||||||||||||||    
T  46024114 gattattacacgtgt--acactatatctgatggttgtgaagtgtttatgcacggtgcataaggattttcttgtgcaccataacttttgccaa 46024025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 9332027 - 9331962
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  9332027 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 9331962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 19889406 - 19889341
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  19889406 ttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 19889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 24250379 - 24250314
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  24250379 ttttcaatgaaaagttaatacttttagtttccttaacatgtgcaatattgcacatgttagacaaac 24250314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 47120306 - 47120371
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||||    
T  47120306 ttttcaatgaaaaattactacttttagttaccataacatgtgcaatattgcacatgttagacaaac 47120371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 19868180 - 19868112
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    |||||||||||||| ||||||| |||||||  ||||||||||| |||||||||||||||||||||||||    
T  19868180 tttttcaatgaaaatttactacttttagttgtcttaacatgtgcaatattgcacatgttagacaaactc 19868112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 36548572 - 36548636
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    |||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  36548572 ttttcaataaaaaattactacttttagttcccttaacatgtgcaatattgcacatgttagacaaa 36548636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 23982868 - 23982938
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactctaa 316  Q
    |||| |||||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  23982868 ttttgaatgaaaagttactacttttagttgccttaacatgtataatattgcacatgttagacaaaccctaa 23982938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 12279818 - 12279745
Alignment:
Q  133 tacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||| |||||||| |||| ||| ||||  |||||||| ||||||||||||||||||||||||||||    
T  12279818 tacactagatctaatggttgtgaagtctttatgcacggtgcataaagatttccttatgcaccataacttttgcc 12279745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 32117896 - 32117815
Alignment:
Q  230 taataataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| | | |||| ||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  32117896 taataataattggtgttttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattgcacatgttagataaac 32117815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 48305312 - 48305236
Alignment:
Q  130 gtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcca 207  Q
    |||||||||||||| |||| ||||||||||||| ||||  |||||||||||  |||||||||||||||||||||||||    
T  48305312 gtgtacactagatccgatgtttgtaaagtgtttatgcacggtgcataagga-atccttatgcaccataacttttgcca 48305236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 3561990 - 3562054
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    ||||||||||||| ||||| | ||||||| |||||||||||| ||||||||||||||||||||||    
T  3561990 ttttcaatgaaaagttactgcttttagttaccttaacatgtgcaatattgcacatgttagacaaa 3562054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 28396827 - 28396722
Alignment:
Q  99 tgtagaaatgaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataa 198  Q
    |||||| ||||||| || ||||||||| | |||  ||||||||||||||| |||| || ||||| ||||  ||||||||||||||||||||||| | |||    
T  28396827 tgtagagatgaagcctaggattattactcttgt--acactagatctgatgattgtgaaatgtttatgcacggtgcataaggatttccttatgcatcgtaa 28396730  T
Q  199 cttttgcc 206  Q
    ||||||||    
T  28396729 cttttgcc 28396722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 5909394 - 5909459
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||| | ||||||| |||||||||||| ||||||||||||||||| |||||    
T  5909394 ttttcaatgaaaagttactgcttttagttgccttaacatgtgcaatattgcacatgttagtcaaac 5909459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 12086043 - 12086108
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| ||||| ||||||| ||||||| |||||||||||| |||||| ||||||||||||||||    
T  12086043 ttttcaacgaaaagttactacttttagttgccttaacatgtgcaatattacacatgttagacaaac 12086108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 24463067 - 24463132
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| | |||||||||| ||||||| |||||||||||| |||||| ||||||||||||||||    
T  24463067 ttttcaataagaaattactacttttagttgccttaacatgtgaaatatttcacatgttagacaaac 24463132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 25778902 - 25778837
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||| ||||| || |||| |||||||||| |||| ||||||||||||||||||||||    
T  25778902 atctgatggttgtgaagtgcttatgcacagtgcataagaattttcttatgcaccataacttttgcc 25778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 39869188 - 39869123
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||  ||||||||| |||||||||| ||||||||| |||||||||||||    
T  39869188 ttttcaatgaaaagttactatttttagtttctttaacatgtgcaatattgcatatgttagacaaac 39869123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 33343053 - 33342989
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  33343053 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 33342989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 7170067 - 7170005
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaa 309  Q
    ||||||| |||| ||||||  ||||||| |||||||||||| |||||||||||||||||||||    
T  7170067 tttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 7170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 5757474 - 5757413
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagga 180  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| ||||  |||||||||||    
T  5757474 gattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataagga 5757413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 12279717 - 12279641
Alignment:
Q  130 gtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||| ||||| |||||||| |||| ||| | ||  |||||||| |||||||||||| |||||||||||||||    
T  12279717 gtgtacactggatctaatggttgtgaagtctttatacacggtgcataatgatttccttatgtaccataacttttgcc 12279641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 46290075 - 46290011
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| |||||||||||| ||| |||||||||||||||||||    
T  46290075 tttcaataaaaacttgctacttttagttaccttaacatgtgcaattttgcacatgttagacaaac 46290011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 34270309 - 34270266
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  34270309 tttagttaccttaacatgtgcaatattgcacatgttagacaaac 34270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 47457583 - 47457638
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    |||||||||||| |||||||   |||||||||| ||||||||||||||||||||||    
T  47457583 aaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaa 47457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 44807000 - 44806934
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| ||||||| |||||| ||||  |  |||||||||||||||||||||||| ||||||||||    
T  44807000 tttttcagtgaaaaaatactacttttaaatgtcttaacatgtgtaatattgcacatattagacaaac 44806934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 48691097 - 48691038
Alignment:
Q  99 tgtagaaatgaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgt 160  Q
    |||||| ||||||| || |||||||||||||||  |||||||||||||||||||| ||||||    
T  48691097 tgtagagatgaagcctaggattattacacgtgt--acactagatctgatggttgtgaagtgt 48691038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 12624714 - 12624638
Alignment:
Q  234 aataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||| ||||||||||||| |||||| ||||  ||||||| |||||| |||| ||||||||||||| ||| ||||||    
T  12624714 aataattgatatttttcaataaaaaataactat-tttagttaccttaatatgtataatattgcacatcttaaacaaac 12624638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 46573469 - 46573563
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| |  |  ||||||||| |   ||||||||| |||||||||||||    
T  46573469 gaagcctaggattattacacgtgt--acactagatctgatggttgtgaagtgtttatatacggtgcataagaa--accttatgcatcataacttttgcc 46573563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 763834 - 763869
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    |||| |||||||||||||||||||||||||||||||    
T  763834 tgcacagtgcataaggatttccttatgcaccataac 763869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 6620656 - 6620621
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||| ||||||||||||||    
T  6620656 tgcatagtgcataaggatttcgttatgcaccataac 6620621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 15973897 - 15973862
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    ||||| ||||||||||||||||||||||||||||||    
T  15973897 tgcatggtgcataaggatttccttatgcaccataac 15973862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 46572611 - 46572576
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    ||||| ||||||||||||||||||||||||||||||    
T  46572611 tgcatggtgcataaggatttccttatgcaccataac 46572576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 25709515 - 25709577
Alignment:
Q  249 tcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||| |||||||||||| |||||||   |||||||||| |||||| ||||||||||| ||||    
T  25709515 tcaataaaaaattactacttttagttgatttaacatgtgcaatatttcacatgttagaaaaac 25709577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 29398226 - 29398292
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||||||||| ||   ||||||   |||||||||| ||| |||||||||||||||||||    
T  29398226 tttttcaatgaaaaattagtattattagttgttttaacatgtgcaatgttgcacatgttagacaaac 29398292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 4161938 - 4161885
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagaca 308  Q
    |||| ||||||| ||||||| | |||||||||| |||||| |||||||||||||    
T  4161938 aaaagttactacttttagttcctttaacatgtgcaatattacacatgttagaca 4161885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 11732073 - 11732044
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  11732073 gtgcataaggatttccttatgcaccataac 11732044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 12650886 - 12650821
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||  |||||||  ||||||||||  ||||||||||||| |||| ||||    
T  12650886 ttttcaatgaaaagttactatttttagttggcttaacatgtacaatattgcacatgctagataaac 12650821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 16933166 - 16933137
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  16933166 gtgcataaggatttccttatgcaccataac 16933137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 16938549 - 16938520
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  16938549 gtgcataaggatttccttatgcaccataac 16938520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 26945727 - 26945756
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  26945727 gtgcataaggatttccttatgcaccataac 26945756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 30884145 - 30884116
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  30884145 gtgcataaggatttccttatgcaccataac 30884116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 31660212 - 31660241
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  31660212 gtgcataaggatttccttatgcaccataac 31660241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 33798746 - 33798775
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  33798746 gtgcataaggatttccttatgcaccataac 33798775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 35737091 - 35737120
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  35737091 gtgcataaggatttccttatgcaccataac 35737120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 38837742 - 38837771
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  38837742 gtgcataaggatttccttatgcaccataac 38837771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 41911035 - 41911006
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  41911035 gtgcataaggatttccttatgcaccataac 41911006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 44426629 - 44426600
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  44426629 gtgcataaggatttccttatgcaccataac 44426600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 46004548 - 46004577
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  46004548 gtgcataaggatttccttatgcaccataac 46004577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 46358663 - 46358692
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  46358663 gtgcataaggatttccttatgcaccataac 46358692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 47340290 - 47340319
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  47340290 gtgcataaggatttccttatgcaccataac 47340319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 48692063 - 48692092
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  48692063 gtgcataaggatttccttatgcaccataac 48692092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 48830612 - 48830641
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  48830612 gtgcataaggatttccttatgcaccataac 48830641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 7845111 - 7845139
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  7845111 tgcataaggatttccttatgcaccataac 7845139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 31365301 - 31365273
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  31365301 tgcataaggatttccttatgcaccataac 31365273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 34227706 - 34227678
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  34227706 tgcataaggatttccttatgcaccataac 34227678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 43742279 - 43742251
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  43742279 tgcataaggatttccttatgcaccataac 43742251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 44141229 - 44141290
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagga 180  Q
    |||||||||||||||  |||||| ||| ||||||||| |||||||| ||||  |||||||||||    
T  44141229 gattattacacgtgt--acactaaatcagatggttgtgaagtgtttatgcagggtgcataagga 44141290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 46004378 - 46004342
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataact 200  Q
    |||| |||||||||||||||| |||||||||||||||    
T  46004378 tgcagagtgcataaggatttcgttatgcaccataact 46004342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 27764336 - 27764238
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcca 207  Q
    ||||| || |||||||||||||||  |||||||||||||||||||  |||||||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  27764336 gaagcgtaggattattacacgtgt--acactagatctgatggttgcgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcca 27764239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 36621670 - 36621762
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttt 202  Q
    |||||||| |||||||||||||||  ||| |||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||    
T  36621670 gaagcataggattattacacgtgt--acattagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttt 36621762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 26447391 - 26447477
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| ||||  ||||||||||||||||||||||||||| |||||||||    
T  26447391 attattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccattacttttgcc 26447477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 45256062 - 45255975
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||||||  |||||| ||||||| ||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  45256062 gattattacacgtgt--acactatatctgatagttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 45255975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 22181223 - 22181307
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataactttt 203  Q
    |||||||||||||||  |||||| ||||||||||||| |||| ||| ||||  ||||||||||||||||||||||||||||||||||    
T  22181223 gattattacacgtgt--acactaaatctgatggttgtgaagtttttatgcacggtgcataaggatttccttatgcaccataactttt 22181307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 316
Target Start/End: Complemental strand, 49332402 - 49332328
Alignment:
Q  242 atatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactctaa 316  Q
    ||||||||||||||||| ||| ||| |||| || |||||||||||| ||||||||||||||||||||||| ||||    
T  49332402 atatttttcaatgaaaagttattacttttaattaccttaacatgtgaaatattgcacatgttagacaaaccctaa 49332328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 50643808 - 50643742
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcca 207  Q
    ||||||||||| | |||||||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  50643808 atctgatggttatgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcca 50643742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 49228422 - 49228357
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| ||||||||| || |||||||||||||||||||||||    
T  49228422 ttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 49228357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 9326979 - 9327047
Alignment:
Q  243 tatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||||||| |||||||| |||||||| ||||||| || ||||||||| |||||||||||||    
T  9326979 tatttttcaatgaaaagttactacaattagtttctttaacatatgcaatattgcatatgttagacaaac 9327047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 9373701 - 9373769
Alignment:
Q  243 tatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||||||| |||||||| |||||||| ||||||| || ||||||||| |||||||||||||    
T  9373701 tatttttcaatgaaaagttactacaattagtttctttaacatatgcaatattgcatatgttagacaaac 9373769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 9382013 - 9382081
Alignment:
Q  243 tatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||||||| |||||||| |||||||| ||||||| || ||||||||| |||||||||||||    
T  9382013 tatttttcaatgaaaagttactacaattagtttctttaacatatgcaatattgcatatgttagacaaac 9382081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 10658557 - 10658621
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  10658557 tttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaac 10658621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 10872702 - 10872766
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  10872702 tttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaac 10872766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 16667496 - 16667567
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactctaa 316  Q
    |||||||||||||||||||||| ||||| |  ||||||||||| ||| ||||||||||||||||||| ||||    
T  16667496 tttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccctaa 16667567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 7349754 - 7349689
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||| ||| ||||||| |||||||||||| |||||||||| ||||||||||||    
T  7349754 ttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacgtgttagacaaac 7349689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 21097226 - 21097140
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||  | ||||||||| |||||||| |||||||| | ||  ||||||||||||||||||||||||  |||||||||||    
T  21097226 attattacacgtgt--aaactagatctaatggttgtgaagtgtttatacacggtgcataaggatttccttatgcacggtaacttttgcc 21097140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 9759255 - 9759319
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  9759255 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 9759319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 50352367 - 50352303
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  50352367 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 50352303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 23553626 - 23553571
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    |||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||    
T  23553626 aaaaattactatttttagttaccttaacatgtgcaatattgcacatgttagacaaa 23553571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 29826606 - 29826669
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttg 204  Q
    ||||||||||||| ||||| || ||||  ||||||||||||||||||||| |||||||||||||    
T  29826606 atctgatggttgtgaagtgcttatgcacggtgcataaggatttccttatgtaccataacttttg 29826669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 8736922 - 8736988
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||||    
T  8736922 tttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 8736988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 29190928 - 29190982
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacat 300  Q
    ||||||||||||||||||||| ||||||| ||||||||| || ||||||||||||    
T  29190928 ttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcacat 29190982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 38485643 - 38485739
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcca 207  Q
    ||||| || |||||||||||||||  ||| |||||||||||||||| ||| |||| ||||  ||||||||    ||||||||||||||||||||||| ||    
T  38485643 gaagcctaggattattacacgtgt--acattagatctgatggttgtgaagcgtttatgcacggtgcataa----ttccttatgcaccataacttttgaca 38485736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 47327004 - 47327070
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||||||||||||| ||||| |  ||||||||||| ||| ||||||| |||||||||||    
T  47327004 tttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaac 47327070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 47341800 - 47341866
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||||||||||||| ||||| |  ||||||||||| ||| ||||||| |||||||||||    
T  47341800 tttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaac 47341866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 10389380 - 10389445
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| ||| ||| ||||||| |  |||||||||||||||||||||||||||||||||    
T  10389380 ttttcaattaaaagttaatacttttagttactataacatgtgtaatattgcacatgttagacaaac 10389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 299
Target Start/End: Complemental strand, 27756643 - 27756574
Alignment:
Q  230 taataataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcaca 299  Q
    |||||||||| | | |||| ||||| ||| || ||||||||||||||||||||||||| |||||||||||    
T  27756643 taataataattggtgttttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattgcaca 27756574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 4168445 - 4168384
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagga 180  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  4168445 gattattaca--tgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagga 4168384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 25843357 - 25843289
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    ||||||||| |||| ||||||| ||||||| | ||||||||| | |||||| |||||||||||||||||    
T  25843357 tttttcaataaaaagttactacttttagttgctttaacatgtattatattgtacatgttagacaaactc 25843289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 40049615 - 40049559
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||| ||||||| ||||||| | |||||||||| |||||||||||||||||||||||    
T  40049615 aaaacttactacttttagttactttaacatgtgcaatattgcacatgttagacaaac 40049559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 309
Target Start/End: Complemental strand, 49181138 - 49181074
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaa 309  Q
    ||||||||| |||  || |||| |||||||||||||||||||| |||||||||||| ||||||||    
T  49181138 tttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacattttagacaa 49181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 36000052 - 36000119
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    |||||||| |||| ||||||| ||||||| |||||||||||  ||||||||| |||||||| ||||||    
T  36000052 ttttcaataaaaagttactacttttagttaccttaacatgtacaatattgcatatgttagataaactc 36000119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 36968338 - 36968283
Alignment:
Q  261 tactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactctaa 316  Q
    |||||| ||||||| | ||||||||||||||||||||||||||||| |||| ||||    
T  36968338 tactacttttagttactttaacatgtgtaatattgcacatgttagataaaccctaa 36968283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 54495749 - 54495820
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactctaa 316  Q
    ||||||||  |||||||||||| ||||| |  ||||||||||| ||| ||||||||||||||||||| ||||    
T  54495749 tttttcaaaaaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaaccctaa 54495820  T

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Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 6875578 - 6875500
Alignment:
Q  234 aataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaact 312  Q
    |||||| |||||||| |||| ||| |||||||  |||||||   |||||||||| ||||||||| ||||||||||||||    
T  6875578 aataattgatattttccaataaaatattactatttttagttgttttaacatgtgcaatattgcaaatgttagacaaact 6875500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 49650276 - 49650211
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||| |||||||| ||||| | ||||||| |||||| ||||| ||||||||||| |||||||||||    
T  49650276 tttttaatgaaaagttacttcttttagttaccttaatatgtgcaatattgcacaggttagacaaac 49650211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 50563708 - 50563794
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| ||||  ||||||| | | |  ||||||||  ||||||||||||    
T  50563708 attattacacgtgt--acactagatctgatggttgtgaagtgtttatgcagggtgcatatgaaatatcttatgcataataacttttgcc 50563794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 39876895 - 39876844
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcac 298  Q
    ||||||| |||| ||||||| ||||||| |||||||||||| ||||||||||    
T  39876895 tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcac 39876844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 48910969 - 48911012
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||  ||||||||||| |||||||||||||||||||||||    
T  48910969 tttagttatcttaacatgtgcaatattgcacatgttagacaaac 48911012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 637929 - 637883
Alignment:
Q  131 tgtacactagatctgatggttgtaaagtgtttctgcatagtgcataa 177  Q
    ||||||||||||||||||||||| |||||||| ||||  ||||||||    
T  637929 tgtacactagatctgatggttgtgaagtgtttatgcacggtgcataa 637883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 1377504 - 1377454
Alignment:
Q  261 tactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||| |||| || | ||||||||||||||||||||| ||||||||||||    
T  1377504 tactacttttaattactttaacatgtgtaatattgcacgtgttagacaaac 1377454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 1729604 - 1729678
Alignment:
Q  130 gtgtacactagatctgatggttgtaaagtgtttctgcatagtgcat-aaggatttccttatgcaccataactttt 203  Q
    |||||||||||||||||||||||| |||||||| ||||  ||| || ||| | |  |||||||||||||||||||    
T  1729604 gtgtacactagatctgatggttgtgaagtgtttatgcacggtgtataaagaaatgacttatgcaccataactttt 1729678  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 200
Target Start/End: Original strand, 8157302 - 8157332
Alignment:
Q  170 gtgcataaggatttccttatgcaccataact 200  Q
    |||||||||||||||||||||||||||||||    
T  8157302 gtgcataaggatttccttatgcaccataact 8157332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 23545542 - 23545476
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||  ||||||||||||  ||||||   |||||||||| ||| |||||||||||||||||||    
T  23545542 tttttcaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 23545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 312
Target Start/End: Original strand, 24243034 - 24243068
Alignment:
Q  278 ttaacatgtgtaatattgcacatgttagacaaact 312  Q
    |||||||||||||| ||||||||||||||||||||    
T  24243034 ttaacatgtgtaatgttgcacatgttagacaaact 24243068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 34941344 - 34941278
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||| ||  ||| ||||||| |||||| ||||| |||||| ||||||||||||||||    
T  34941344 tttttcaataaaaagttgttacttttagttaccttaatatgtgcaatattacacatgttagacaaac 34941278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 200
Target Start/End: Complemental strand, 49492435 - 49492405
Alignment:
Q  170 gtgcataaggatttccttatgcaccataact 200  Q
    |||||||||||||||||||||||||||||||    
T  49492435 gtgcataaggatttccttatgcaccataact 49492405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 55765547 - 55765481
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataagg-atttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||| |||||| ||||  |||||||||| | |  ||||||||||||||||||||||    
T  55765547 atctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 55765481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 1492703 - 1492674
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  1492703 gtgcataaggatttccttatgcaccataac 1492674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 2124375 - 2124346
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  2124375 gtgcataaggatttccttatgcaccataac 2124346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 6841852 - 6841823
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  6841852 gtgcataaggatttccttatgcaccataac 6841823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 8165793 - 8165764
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  8165793 gtgcataaggatttccttatgcaccataac 8165764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 10473661 - 10473690
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  10473661 gtgcataaggatttccttatgcaccataac 10473690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 11786117 - 11786146
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  11786117 gtgcataaggatttccttatgcaccataac 11786146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 11798284 - 11798313
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  11798284 gtgcataaggatttccttatgcaccataac 11798313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 12722768 - 12722739
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  12722768 gtgcataaggatttccttatgcaccataac 12722739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 13635648 - 13635619
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  13635648 gtgcataaggatttccttatgcaccataac 13635619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 15051059 - 15051030
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  15051059 gtgcataaggatttccttatgcaccataac 15051030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 17109931 - 17109960
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  17109931 gtgcataaggatttccttatgcaccataac 17109960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 21995701 - 21995672
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  21995701 gtgcataaggatttccttatgcaccataac 21995672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 22180237 - 22180208
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  22180237 gtgcataaggatttccttatgcaccataac 22180208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 25715674 - 25715645
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  25715674 gtgcataaggatttccttatgcaccataac 25715645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 26577292 - 26577263
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  26577292 gtgcataaggatttccttatgcaccataac 26577263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 30358850 - 30358879
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  30358850 gtgcataaggatttccttatgcaccataac 30358879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 30597842 - 30597871
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  30597842 gtgcataaggatttccttatgcaccataac 30597871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 30779374 - 30779345
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  30779374 gtgcataaggatttccttatgcaccataac 30779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 31763121 - 31763150
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  31763121 gtgcataaggatttccttatgcaccataac 31763150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 33819722 - 33819693
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  33819722 gtgcataaggatttccttatgcaccataac 33819693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 33883325 - 33883296
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  33883325 gtgcataaggatttccttatgcaccataac 33883296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 35911180 - 35911143
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaaca 283  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  35911180 ttttcaatgcaaaattactacttttagtttccttaaca 35911143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 36924272 - 36924243
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  36924272 gtgcataaggatttccttatgcaccataac 36924243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 37059742 - 37059713
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  37059742 gtgcataaggatttccttatgcaccataac 37059713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 39539530 - 39539465
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    |||||||||||||||||||||  ||||| |  |||| |||||| ||| |||| |||||||||||||    
T  39539530 tttttcaatgaaaaattactaagtttagatgtcttagcatgtgcaatgttgcgcatgttagacaaa 39539465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 45256908 - 45256937
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  45256908 gtgcataaggatttccttatgcaccataac 45256937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 49425980 - 49425951
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  49425980 gtgcataaggatttccttatgcaccataac 49425951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 50644683 - 50644712
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  50644683 gtgcataaggatttccttatgcaccataac 50644712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 53441463 - 53441492
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  53441463 gtgcataaggatttccttatgcaccataac 53441492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 53865256 - 53865285
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  53865256 gtgcataaggatttccttatgcaccataac 53865285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 54895596 - 54895625
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  54895596 gtgcataaggatttccttatgcaccataac 54895625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 198
Target Start/End: Original strand, 639007 - 639035
Alignment:
Q  170 gtgcataaggatttccttatgcaccataa 198  Q
    |||||||||||||||||||||||||||||    
T  639007 gtgcataaggatttccttatgcaccataa 639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 3085420 - 3085352
Alignment:
Q  243 tatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||  ||||||||||||  ||| ||   |||||||||| ||| |||||||||||||||||||    
T  3085420 tatttttcaagaaaaaattactactattaattgttttaacatgtgcaatgttgcacatgttagacaaac 3085352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 9971710 - 9971742
Alignment:
Q  279 taacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||||||||||||||||    
T  9971710 taacatgtgcaatattgcacatgttagacaaac 9971742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 30597765 - 30597697
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataaggatttc-cttatgcaccataacttttgccaa 208  Q
    ||||||||||||| | |||||| ||||  |||||||||||  |  ||||||||||||||||||||||||    
T  30597765 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccaa 30597697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 31762959 - 31762931
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  31762959 tgcataaggatttccttatgcaccataac 31762931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 36309447 - 36309419
Alignment:
Q  170 gtgcataaggatttccttatgcaccataa 198  Q
    |||||||||||||||||||||||||||||    
T  36309447 gtgcataaggatttccttatgcaccataa 36309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 48077874 - 48077910
Alignment:
Q  170 gtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||||||||||||||  ||||||||||||    
T  48077874 gtgcataaggatttccttatgcatgataacttttgcc 48077910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 13709 - 13612
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcca 207  Q
    ||||| || ||||||||||  ||||||||||||||||||||||||| |||||||| ||||  ||| ||||||||||||||||||||||||||||||||||    
T  13709 gaagcgtaggattattaca--tgtgtacactagatctgatggttgtgaagtgtttatgcacggtggataaggatttccttatgcaccataacttttgcca 13612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 25207 - 25299
Alignment:
Q  114 taagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgccaa 208  Q
    ||||||||| ||||||||  |||||| ||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  25207 taagattatgacacgtgt--acactaaatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgccaa 25299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 25017196 - 25017280
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttg 204  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  25017196 attattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 25017280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 28070131 - 28070218
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||||||  |||||||||||||| ||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  28070131 gattattacacgtgt--acactagatctgatagttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 28070218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 5958236 - 5958301
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  5958236 ttttcaatgaaaaattactacttttagtttctttaacatgtgtaatattgcacatgttagacaaac 5958301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 13362866 - 13362772
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttg 204  Q
    ||||| || ||||||||||||| |  |||||||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  13362866 gaagcctatgattattacacgtat--acactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 13362772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 23335676 - 23335773
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcca 207  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| || ||||| ||||  ||||||| ||||||||||||||||||||||||||||||    
T  23335676 gaagcctatgattattacacgtgt--acactagatctgatggttgtgaaatgtttatgcacggtgcatacggatttccttatgcaccataacttttgcca 23335773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 34329203 - 34329127
Alignment:
Q  130 gtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||||||||||||||| |||||||| ||||  |||||||| ||||||||||||||||||||||||||||    
T  34329203 gtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaagatttccttatgcaccataacttttgcc 34329127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 12642105 - 12642173
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactct 314  Q
    ||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||||||||||||||    
T  12642105 ttttcaatgaaaaattactacttttagttgccttaacatgtacaatattgcacatgttagacaaactct 12642173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 32020081 - 32020161
Alignment:
Q  230 taataataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    |||||||||||| | |||||||| ||||| |||||| ||||||||||||||||| ||| ||||||||||||||||||||||    
T  32020081 taataataatcggtgtttttcaaagaaaagttactagatttagtttccttaacaagtgcaatattgcacatgttagacaaa 32020161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 2795589 - 2795524
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  2795589 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2795524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 11636797 - 11636732
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  11636797 ttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaac 11636732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 34578077 - 34578012
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  34578077 ttttcaatgaaaaattattacttttagttaccttaacatgtggaatattgcacatgttagacaaac 34578012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 13516022 - 13516103
Alignment:
Q  230 taataataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| |||||||| ||||| ||| || ||||||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  13516022 taataataattgatattttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattacacatattagataaac 13516103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 15190938 - 15190873
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||||||||||| |||| || ||||||||| || |||||||||||||||||||||||    
T  15190938 ttttcaatgaaaaattactacttttacttaccttaacatatgcaatattgcacatgttagacaaac 15190873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 9184273 - 9184209
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||| |||||||||||||||    
T  9184273 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattacacatgttagacaaa 9184209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 30328439 - 30328504
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||| |||||||||| ||||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  30328439 tttttaatgaaaaatgactacttttagttatcttaacatgtgcaatattgcacatgttagacaaac 30328504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 30839846 - 30839782
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  30839846 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 30839782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 31366073 - 31366129
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||| ||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  31366073 aaaagttactacatttagctaccttaacatgtgcaatattgcacatgttagacaaac 31366129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 36597644 - 36597580
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  36597644 tttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 36597580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 40513016 - 40512952
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| ||||||| | ||||| |||||||||||| |||||||||||||||||||||||    
T  40513016 tttcaataaaaacttactacttctagttaccttaacatgtgcaatattgcacatgttagacaaac 40512952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 8103693 - 8103755
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaa 309  Q
    ||||||| |||| ||||||  ||||||| |||||||||||| |||||||||||||||||||||    
T  8103693 tttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 8103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 10665077 - 10665142
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||| ||| ||||||| |||||||||||| |||||| |||||||| |||||||    
T  10665077 ttttcaatgaaaagttattacttttagttaccttaacatgtgcaatattacacatgttggacaaac 10665142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 16668763 - 16668833
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagga 180  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| ||||  |||||||||||    
T  16668763 gaagcctaggattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcagggtgcataagga 16668833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 2827036 - 2827093
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgca 167  Q
    ||||| |||||| |||||||||||  ||||||||||||||||||||||||||||| ||||    
T  2827036 gaagcctaagataattacacgtgt--acactagatctgatggttgtaaagtgtttatgca 2827093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 18465531 - 18465582
Alignment:
Q  114 taagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgca 167  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||| ||||    
T  18465531 taagattattacacgtgt--acactagatctgatggttgtgaagtgtttatgca 18465582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Original strand, 39086715 - 39086749
Alignment:
Q  166 catagtgcataaggatttccttatgcaccataact 200  Q
    |||||||||||||||||||||||||||||||||||    
T  39086715 catagtgcataaggatttccttatgcaccataact 39086749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 4047478 - 4047413
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| ||||||||| || ||||||| | |||||||| ||||    
T  4047478 ttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgtatatgttagataaac 4047413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 11376025 - 11375972
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcaca 299  Q
    ||||||||||||| ||||||| ||||||| | |||||||||| |||||||||||    
T  11376025 ttttcaatgaaaagttactacttttagttgctttaacatgtgcaatattgcaca 11375972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 10658397 - 10658465
Alignment:
Q  243 tatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||| ||| || |||| ||||||| | ||| |||||||||||| |||||||||| ||||||    
T  10658397 tatttttcaatgtaaagttgctacttttagttcctttatcatgtgtaatatcgcacatgttaaacaaac 10658465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 42512271 - 42512200
Alignment:
Q  134 acactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||||||||||||| |||||||| ||||  ||| ||||||||||| || |  |||||||||||||||    
T  42512271 acactagatctgatggttgtgaagtgtttatgcacggtggataaggatttctttct-aaccataacttttgcc 42512200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 11360242 - 11360183
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactct 314  Q
    |||||||||||| |||||||   |||||||||||||||||| |||||||| | |||||||    
T  11360242 aaaaattactacttttagttgttttaacatgtgtaatattgaacatgttaaataaactct 11360183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 13553049 - 13552978
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataaggatttc-cttatgcaccataacttttgccaacag 211  Q
    ||||||||||||| | |||||| ||||  |||||||||||  |  |||||||||||||||||||||||||||    
T  13553049 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccaacag 13552978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 15241227 - 15241270
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||    
T  15241227 tttagtttctttaacatgtgcaatattgcatatgttagacaaac 15241270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 15559086 - 15559051
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    ||||| ||||||||||||||||||||||||||||||    
T  15559086 tgcatggtgcataaggatttccttatgcaccataac 15559051  T

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Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 20134406 - 20134441
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    |||| |||||||||||||||||||||||||||||||    
T  20134406 tgcagagtgcataaggatttccttatgcaccataac 20134441  T

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Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 37456817 - 37456852
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    ||||| ||||||||||||||||||||||||||||||    
T  37456817 tgcatggtgcataaggatttccttatgcaccataac 37456852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 200
Target Start/End: Original strand, 22830801 - 22830831
Alignment:
Q  170 gtgcataaggatttccttatgcaccataact 200  Q
    |||||||||||||||||||||||||||||||    
T  22830801 gtgcataaggatttccttatgcaccataact 22830831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 33072733 - 33072675
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    ||||| |||||| |||||||   |||||||||| |||||||||||||||| ||||||||    
T  33072733 aaaaagtactacttttagttgatttaacatgtgcaatattgcacatgttaaacaaactc 33072675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 200
Target Start/End: Complemental strand, 703760 - 703731
Alignment:
Q  171 tgcataaggatttccttatgcaccataact 200  Q
    ||||||||||||||||||||||||||||||    
T  703760 tgcataaggatttccttatgcaccataact 703731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 3340621 - 3340592
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  3340621 gtgcataaggatttccttatgcaccataac 3340592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 3340788 - 3340821
Alignment:
Q  166 catagtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||| ||||||||||    
T  3340788 catagtgcataaggatttccttacgcaccataac 3340821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 3883958 - 3883929
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  3883958 gtgcataaggatttccttatgcaccataac 3883929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 11660824 - 11660795
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  11660824 gtgcataaggatttccttatgcaccataac 11660795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 11660995 - 11661024
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  11660995 gtgcataaggatttccttatgcaccataac 11661024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 13553126 - 13553155
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  13553126 gtgcataaggatttccttatgcaccataac 13553155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 14394611 - 14394640
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  14394611 gtgcataaggatttccttatgcaccataac 14394640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 14466634 - 14466667
Alignment:
Q  278 ttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| |||||||||||||||||||||||    
T  14466634 ttaacatgtgcaatattgcacatgttagacaaac 14466667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 14940279 - 14940250
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  14940279 gtgcataaggatttccttatgcaccataac 14940250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 22695553 - 22695582
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  22695553 gtgcataaggatttccttatgcaccataac 22695582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 23155556 - 23155527
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  23155556 gtgcataaggatttccttatgcaccataac 23155527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 25545585 - 25545614
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  25545585 gtgcataaggatttccttatgcaccataac 25545614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 26637760 - 26637731
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  26637760 gtgcataaggatttccttatgcaccataac 26637731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 35662098 - 35662069
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  35662098 gtgcataaggatttccttatgcaccataac 35662069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 39861793 - 39861822
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  39861793 gtgcataaggatttccttatgcaccataac 39861822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 8716082 - 8716139
Alignment:
Q  254 gaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    |||||||||||||  |||||||| ||||||| || ||||||||| | |||||||||||||    
T  8716082 gaaaaattactac--ttagtttctttaacatatgcaatattgcatacgttagacaaactc 8716139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 11250086 - 11250134
Alignment:
Q  263 ctacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||| ||||||| | |||||||||| |||||||||||||||| ||||||    
T  11250086 ctacttttagttgctttaacatgtgcaatattgcacatgttaaacaaac 11250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 20134229 - 20134201
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  20134229 tgcataaggatttccttatgcaccataac 20134201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 22672011 - 22672039
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  22672011 tgcataaggatttccttatgcaccataac 22672039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 51362407 - 51362503
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||| || |||||||||||||||  |||||| ||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  51362407 gaagcctaggattattacacgtgt--acactaaatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 51362503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 19385294 - 19385380
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||  |||||| ||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  19385294 attattacacgtgt--acactaaatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 19385380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 50754102 - 50754008
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttg 204  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| ||||  ||||||||||||||||||||| |||||||||||||    
T  50754102 gaagcctaggattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgtaccataacttttg 50754008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 7045269 - 7045365
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| | ||  ||||||||| |||||||||||||||||||||||||||    
T  7045269 gaagcctacgattattacacgtgt--acactagatctgatggttgtgaagtgtttatacacggtgcataagaatttccttatgcaccataacttttgcc 7045365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 8718176 - 8718101
Alignment:
Q  131 tgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||||||||||| |||| ||| || |  |||||||||||||||||||||||||||||||||||||    
T  8718176 tgtacactagatctgatggttgtgaagtatttatgtacggtgcataaggatttccttatgcaccataacttttgcc 8718101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 9070063 - 9069988
Alignment:
Q  131 tgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||||||||||| |||| ||| || |  |||||||||||||||||||||||||||||||||||||    
T  9070063 tgtacactagatctgatggttgtgaagtatttatgtacggtgcataaggatttccttatgcaccataacttttgcc 9069988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 16277383 - 16277475
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttt 202  Q
    ||||| || |||||||||||||||  ||||||||| |||||||||| |||||||| ||||  |||||||| ||||||||||||||||||||||||    
T  16277383 gaagcgtaggattattacacgtgt--acactagatatgatggttgtgaagtgtttatgcacggtgcataaagatttccttatgcaccataacttt 16277475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 52987619 - 52987702
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcac 193  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| ||||  ||||||||||||||||||||||||    
T  52987619 gaagcctaggattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcac 52987702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 3863395 - 3863330
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  3863395 ttttcaatgaaaagttactacctttagttaccttaacatgtgcaatattgcacatgttagacaaac 3863330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 11610980 - 11610915
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  11610980 ttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 11610915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 51339296 - 51339360
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    ||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||    
T  51339296 ttttcaatgaaaaattactatttttagttaccttaacatgtgcaatattgcacatgttagacaaa 51339360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 32553432 - 32553367
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||| ||||    
T  32553432 ttttcaatgaaaagttactacttttaattaccttaacatgtgtaatattgcacatgttagataaac 32553367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 37444211 - 37444149
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaa 309  Q
    ||||||| |||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  37444211 tttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaa 37444149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 13495359 - 13495294
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||||||||||| ||||||| |||||||||||| ||  |||||||||||||||||||    
T  13495359 ttttcaataaaaaattactacttttagttaccttaacatgtgcaaatttgcacatgttagacaaac 13495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 20938122 - 20938057
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| |||| ||| ||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  20938122 ttttcaataaaaagttattacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 20938057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 2571333 - 2571269
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  2571333 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2571269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 54621330 - 54621394
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    |||| |||||||||||||||| |||| || ||||||||| || ||||||||||||||||||||||    
T  54621330 tttttaatgaaaaattactacttttaattaccttaacatatgcaatattgcacatgttagacaaa 54621394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 38389513 - 38389447
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||||    
T  38389513 tttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 38389447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 48240218 - 48240268
Alignment:
Q  263 ctacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  48240218 ctacttttagtttctttaacatgtgtaatattacacatgttagacaaactc 48240268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 30214123 - 30214187
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||  ||||||| |||||  |||||||||||||||||||||||||||||    
T  30214123 ttttcaatgaaaagttactat-tttagttgccttagaatgtgtaatattgcacatgttagacaaac 30214187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 10307831 - 10307767
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| ||||||| ||||| |||||| |||||||||||||||||||||||    
T  10307831 tttcaataaaaatttgctacttttagttaccttatcatgtgcaatattgcacatgttagacaaac 10307767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 12515603 - 12515651
Alignment:
Q  263 ctacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  12515603 ctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 12515651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 43750117 - 43750049
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactct 314  Q
    |||||| ||||| |||||||| ||||| |  ||||||||||| |||||||| |||||||||||||||||    
T  43750117 ttttcagtgaaacattactacttttagatgtcttaacatgtgcaatattgcccatgttagacaaactct 43750049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 47386988 - 47386922
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||| ||||||| ||||||| | |||| ||| | |||||||||||||||||||||||    
T  47386988 tttttcaataaaaacttactacttttagttgctttaatatgcgcaatattgcacatgttagacaaac 47386922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 46845553 - 46845618
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| ||||||| |||| ||||||| | |||| ||||| |||||||||||| ||||||||||    
T  46845553 ttttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaac 46845618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 50364256 - 50364191
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||| | || ||||||| ||||||| |||| ||||||| |||| ||||||||||||||||||    
T  50364256 ttttcaattataagttactacttttagttacctttacatgtgcaatactgcacatgttagacaaac 50364191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 9106333 - 9106266
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataagg-atttccttatgcaccataacttttgcca 207  Q
    ||||||||||||||| |||||| ||||  |||||||||| | |  |||||||||||||||||||||||    
T  9106333 atctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcca 9106266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 26662467 - 26662432
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataac 199  Q
    |||| |||||||||||||||||||||||||||||||    
T  26662467 tgcacagtgcataaggatttccttatgcaccataac 26662432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 311
Target Start/End: Original strand, 39365258 - 39365309
Alignment:
Q  260 ttactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| ||||||  | |||||||||| |||||||||||||||||||||||    
T  39365258 ttactacttttagtagctttaacatgtgcaatattgcacatgttagacaaac 39365309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 17627210 - 17627257
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgca 167  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| ||||    
T  17627210 attattacacgtgt--acactagatctgatggttgtgaagtgtttatgca 17627257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 200
Target Start/End: Original strand, 27446226 - 27446256
Alignment:
Q  170 gtgcataaggatttccttatgcaccataact 200  Q
    |||||||||||||||||||||||||||||||    
T  27446226 gtgcataaggatttccttatgcaccataact 27446256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 35095022 - 35094972
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattg 295  Q
    |||||||||||||| ||||| | ||||||| |||||||||||| |||||||    
T  35095022 tttttcaatgaaaagttactgcttttagttaccttaacatgtgcaatattg 35094972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 37055478 - 37055544
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| ||| ||||||  ||||||| | ||||||| || ||||||| |||||||||||||||    
T  37055478 tttttcaatgtaaagttactatttttagttcctttaacatatgcaatattgtacatgttagacaaac 37055544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 39099293 - 39099189
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataagg--------atttccttatgcaccataac 199  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| || | ||| ||||  ||||||||||        |||| |||||||||||||||    
T  39099293 gaagcctaggattattacacgtgt--acactagatctgatggttgtgaaatatttatgcacggtgcataaggaaataagaattttcttatgcaccataac 39099196  T
Q  200 ttttgcc 206  Q
    |||||||    
T  39099195 ttttgcc 39099189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 200
Target Start/End: Original strand, 47924379 - 47924409
Alignment:
Q  170 gtgcataaggatttccttatgcaccataact 200  Q
    |||||||||||||||||||||||||||||||    
T  47924379 gtgcataaggatttccttatgcaccataact 47924409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 200
Target Start/End: Original strand, 50755205 - 50755235
Alignment:
Q  170 gtgcataaggatttccttatgcaccataact 200  Q
    |||||||||||||||||||||||||||||||    
T  50755205 gtgcataaggatttccttatgcaccataact 50755235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 3475330 - 3475301
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  3475330 gtgcataaggatttccttatgcaccataac 3475301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 6097607 - 6097578
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  6097607 gtgcataaggatttccttatgcaccataac 6097578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 8036831 - 8036802
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  8036831 gtgcataaggatttccttatgcaccataac 8036802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 8719150 - 8719179
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  8719150 gtgcataaggatttccttatgcaccataac 8719179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 9071037 - 9071066
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  9071037 gtgcataaggatttccttatgcaccataac 9071066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 9106410 - 9106439
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  9106410 gtgcataaggatttccttatgcaccataac 9106439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 9595903 - 9595874
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  9595903 gtgcataaggatttccttatgcaccataac 9595874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 10986495 - 10986524
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  10986495 gtgcataaggatttccttatgcaccataac 10986524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 12974043 - 12974014
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  12974043 gtgcataaggatttccttatgcaccataac 12974014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 12974203 - 12974232
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  12974203 gtgcataaggatttccttatgcaccataac 12974232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 17620767 - 17620738
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  17620767 gtgcataaggatttccttatgcaccataac 17620738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 19284814 - 19284843
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  19284814 gtgcataaggatttccttatgcaccataac 19284843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 311
Target Start/End: Original strand, 23638150 - 23638227
Alignment:
Q  234 aataatcgatatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||| ||| |||||||||  ||| ||||||| || ||||  |||||||||   |||||||||||||||||||||||    
T  23638150 aataattgatgtttttcaatagaaagttactactttaagttaacttaacatgcacaatattgcacatgttagacaaac 23638227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 27068563 - 27068534
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  27068563 gtgcataaggatttccttatgcaccataac 27068534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 30947834 - 30947805
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  30947834 gtgcataaggatttccttatgcaccataac 30947805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 34562430 - 34562401
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  34562430 gtgcataaggatttccttatgcaccataac 34562401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 36185918 - 36185947
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  36185918 gtgcataaggatttccttatgcaccataac 36185947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 50416511 - 50416482
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  50416511 gtgcataaggatttccttatgcaccataac 50416482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 50416577 - 50416606
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  50416577 gtgcataaggatttccttatgcaccataac 50416606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 51361554 - 51361525
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  51361554 gtgcataaggatttccttatgcaccataac 51361525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 51618083 - 51618050
Alignment:
Q  278 ttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| |||||||||||||||||||||||    
T  51618083 ttaacatgtgcaatattgcacatgttagacaaac 51618050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 54379305 - 54379334
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  54379305 gtgcataaggatttccttatgcaccataac 54379334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 2941849 - 2941821
Alignment:
Q  170 gtgcataaggatttccttatgcaccataa 198  Q
    |||||||||||||||||||||||||||||    
T  2941849 gtgcataaggatttccttatgcaccataa 2941821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 15863017 - 15863085
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    |||||||||| ||| || |||| |||| || |  ||||||||| ||||||||||||||||||| |||||    
T  15863017 tttttcaatgtaaagttgctacttttaattcctgtaacatgtgcaatattgcacatgttagacgaactc 15863085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 26291229 - 26291197
Alignment:
Q  278 ttaacatgtgtaatattgcacatgttagacaaa 310  Q
    |||||||||||||||||||||||||| ||||||    
T  26291229 ttaacatgtgtaatattgcacatgtttgacaaa 26291197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 311
Target Start/End: Original strand, 28992886 - 28992957
Alignment:
Q  242 atatttttcaatgaaaaattactacatttagtttccttaacatgtgtaatat--tgcacatgttagacaaac 311  Q
    |||||||| |||||||| ||||||| |||| ||   |||||||||| |||||  ||||||||||||||||||    
T  28992886 atattttttaatgaaaagttactacttttaattgttttaacatgtgcaatatattgcacatgttagacaaac 28992957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 36185756 - 36185728
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  36185756 tgcataaggatttccttatgcaccataac 36185728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 46492455 - 46492519
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaa 309  Q
    ||||||||| |||| |||| || ||||||| | |||||||||| |||||||||||| ||| ||||    
T  46492455 tttttcaataaaaacttaccacttttagttgctttaacatgtgcaatattgcacattttaaacaa 46492519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 50204459 - 50204403
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||  ||||||   |||||||||| ||| |||||||||||||||||||    
T  50204459 aaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 50204403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 33346350 - 33346436
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||  ||||||||| |||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  33346350 attattacacgtgt--acactagatttgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttgcc 33346436  T

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Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 29157312 - 29157226
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||  ||||||||||||    
T  29157312 attattacacgtgt--acactagatctgatggttgtaaagtgtttatgcacggtgcataaggatttccttgtgcatgataacttttgcc 29157226  T

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Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 34399737 - 34399641
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||| || |||||||||||||||  ||||||||||||||| |||| |||||||| |  |  |||||||||||||||||||||||||||||||||||||    
T  34399737 gaagcctaggattattacacgtgt--acactagatctgatgattgtgaagtgtttatatacggtgcataaggatttccttatgcaccataacttttgcc 34399641  T

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Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 5363005 - 5363070
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  5363005 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 5363070  T

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Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 26602543 - 26602608
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||    
T  26602543 ttttcagtgaaaaattactacttttagtttccttaatatgtgcaatattgcacatgttagacaaac 26602608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 12454131 - 12454064
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    |||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||||||    
T  12454131 ttttcaataaaaaattactacatttaattttcttaacatgtgcaatattgcacatgttacacaaactc 12454064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 15034965 - 15035040
Alignment:
Q  131 tgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||||||||||| ||   ||| ||||  |||||||||||||||||||||||||||||||||||||    
T  15034965 tgtacactagatctgatggttgtgaatgatttatgcacggtgcataaggatttccttatgcaccataacttttgcc 15035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 31791027 - 31791094
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttcctt-aacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  31791027 tttttcaataaaaagttactacatttagtttcctttaacatgtgcaatattgcacatgttagacaaac 31791094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 8977578 - 8977644
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||  || |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  8977578 tttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacatgttagacaaac 8977644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 35119310 - 35119239
Alignment:
Q  131 tgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||||||||||| |||||||| ||||  |||||||||||    ||||||||||||||||||||||    
T  35119310 tgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagga----cttatgcaccataacttttgcc 35119239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 2830793 - 2830857
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||| || ||||||||||||||    
T  2830793 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatactgtacatgttagacaaa 2830857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 12394387 - 12394442
Alignment:
Q  148 ggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataactttt 203  Q
    |||||| |||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  12394387 ggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataactttt 12394442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 18332800 - 18332866
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||||    
T  18332800 tttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 18332866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 18611285 - 18611218
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataa 177  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| |||| |||||||||    
T  18611285 gaagcctatgattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcagagtgcataa 18611218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 29863414 - 29863480
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||| ||| ||||||  ||||||| | |||||||||| |||||||||||||||||||||||    
T  29863414 tttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaac 29863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 17552716 - 17552769
Alignment:
Q  263 ctacatttagtttccttaacatgtgtaatattgcacatgttagacaaactctaa 316  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  17552716 ctacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccctaa 17552769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 309
Target Start/End: Complemental strand, 10887095 - 10887031
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaa 309  Q
    ||||||||| |||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||    
T  10887095 tttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaa 10887031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 14228239 - 14228303
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| |||| || |||||||||||| |||||||||||||||||||||||    
T  14228239 tttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaac 14228303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 28943882 - 28943946
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||| || |||| |||| || |||||||||||| |||||||||||||||||||||||    
T  28943882 tttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaac 28943946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 33017768 - 33017725
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  33017768 tttagttaccttaacatgtgcaatattgcacatgttagacaaac 33017725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 6016922 - 6016856
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    |||||||||||||| ||||||| ||||| |  |||| |||||| ||| |||||||||||||||||||    
T  6016922 tttttcaatgaaaagttactacttttagatgtcttaccatgtgcaatgttgcacatgttagacaaac 6016856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 17596369 - 17596315
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaa 309  Q
    |||| ||||||| |||||||  ||||||||||| |||||||||||||||||||||    
T  17596369 aaaagttactacttttagttgtcttaacatgtgcaatattgcacatgttagacaa 17596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 2086949 - 2086998
Alignment:
Q  247 tttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgc 296  Q
    |||||||||||||||||||| |||| || |||||||||||| ||||||||    
T  2086949 tttcaatgaaaaattactacttttaattaccttaacatgtgcaatattgc 2086998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 2759859 - 2759826
Alignment:
Q  173 cataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||||||||||||||||||||||    
T  2759859 cataaggatttccttatgcaccataacttttgcc 2759826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 24737660 - 24737726
Alignment:
Q  108 gaagcataagattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcata 176  Q
    ||||| || |||||||||||||||  |||||||||||||||||||| |||||||| ||||  |||||||    
T  24737660 gaagcctaggattattacacgtgt--acactagatctgatggttgtgaagtgtttatgcacggtgcata 24737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 10345674 - 10345714
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagaca 308  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  10345674 tttagtttctttaacatgtgcaatattgcacatgttagaca 10345714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 1814916 - 1814959
Alignment:
Q  268 tttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||| | |||||||||| |||||||||||||||||||||||    
T  1814916 tttagttgctttaacatgtgcaatattgcacatgttagacaaac 1814959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 22974685 - 22974731
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaata 292  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| ||||    
T  22974685 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaata 22974731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 23813716 - 23813670
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaata 292  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| ||||    
T  23813716 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaata 23813670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 30623392 - 30623326
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||  |||| |||||||  ||||||   |||||||||||||| |||||||||||||||||||    
T  30623392 tttttcaagaaaaagttactactattagttgttttaacatgtgtaatgttgcacatgttagacaaac 30623326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 6900946 - 6900975
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  6900946 gtgcataaggatttccttatgcaccataac 6900975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 7765417 - 7765446
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  7765417 gtgcataaggatttccttatgcaccataac 7765446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 10588966 - 10588995
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  10588966 gtgcataaggatttccttatgcaccataac 10588995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 14237809 - 14237780
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  14237809 gtgcataaggatttccttatgcaccataac 14237780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 15493317 - 15493346
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  15493317 gtgcataaggatttccttatgcaccataac 15493346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 18755694 - 18755665
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  18755694 gtgcataaggatttccttatgcaccataac 18755665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 19284402 - 19284373
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  19284402 gtgcataaggatttccttatgcaccataac 19284373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 20522861 - 20522890
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  20522861 gtgcataaggatttccttatgcaccataac 20522890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 21385002 - 21385031
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  21385002 gtgcataaggatttccttatgcaccataac 21385031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 22857519 - 22857490
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  22857519 gtgcataaggatttccttatgcaccataac 22857490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 34869986 - 34869957
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  34869986 gtgcataaggatttccttatgcaccataac 34869957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 2086999 - 2087031
Alignment:
Q  279 taacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||||||||||||||||    
T  2086999 taacatgtgcaatattgcacatgttagacaaac 2087031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 25119484 - 25119512
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  25119484 tgcataaggatttccttatgcaccataac 25119512  T

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Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 31169876 - 31169940
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    ||||||| ||||||||||||  ||||||  |||||||||||| ||  ||||||| ||||||||||    
T  31169876 ttttcaaagaaaaattactatttttagtagccttaacatgtgcaagtttgcacaggttagacaaa 31169940  T

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Target: scaffold0544 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 10668 - 10739
Alignment:
Q  134 acactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgc 205  Q
    |||||||||||||||||||| |||||||| ||||  ||| ||||||||||||||||||||||||||||||||    
T  10668 acactagatctgatggttgtgaagtgtttatgcacggtgtataaggatttccttatgcaccataacttttgc 10739  T

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Target: scaffold0061 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 52891 - 52956
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  52891 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 52956  T

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Target: scaffold0017 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 145743 - 145678
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  145743 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 145678  T

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Target: scaffold0011 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 13151 - 13086
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||||||||    
T  13151 ttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 13086  T

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Target: scaffold0337 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 7104 - 7020
Alignment:
Q  117 gattattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataactttt 203  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||| ||||  ||| |||| |||||| ||||||||||||||||||    
T  7104 gattattaca--tgtgtacactagatctgatggttgtgaagtgtttatgcacggtgtataaagatttcgttatgcaccataactttt 7020  T

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Target: scaffold0189 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 11193 - 11255
Alignment:
Q  144 tgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    |||||||||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||    
T  11193 tgatggttgtgaagtgcttatgcacagtgcataaggatttccttatgcaccataacttttgcc 11255  T

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Target: scaffold0194 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 27693 - 27607
Alignment:
Q  118 attattacacgtgtgtacactagatctgatggttgtaaagtgtttctgcatagtgcataaggatttccttatgcaccataacttttgcc 206  Q
    ||||||||||||||  ||||||||||| || ||||| |||||||| ||||  || ||||||  ||||||||||||||||||||||||||    
T  27693 attattacacgtgt--acactagatcttatagttgtgaagtgtttatgcacggtacataagtttttccttatgcaccataacttttgcc 27607  T

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Target: scaffold0727 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 5747 - 5692
Alignment:
Q  255 aaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    |||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||    
T  5747 aaaaattactatttttagttaccttaacatgtgcaatattgcacatgttagacaaa 5692  T

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Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 37226 - 37292
Alignment:
Q  245 tttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaac 311  Q
    ||||||||| |||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||||    
T  37226 tttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 37292  T

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Target: scaffold0338 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 6520 - 6556
Alignment:
Q  164 tgcatagtgcataaggatttccttatgcaccataact 200  Q
    ||||| |||||||||||||||||||||||||||||||    
T  6520 tgcatggtgcataaggatttccttatgcaccataact 6556  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 27342 - 27306
Alignment:
Q  278 ttaacatgtgtaatattgcacatgttagacaaactct 314  Q
    |||||||||||||||||| ||||||||||||||||||    
T  27342 ttaacatgtgtaatattgaacatgttagacaaactct 27306  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 193376 - 193412
Alignment:
Q  277 cttaacatgtgtaatattgcacatgttagacaaactc 313  Q
    ||||||||||| |||||||||||||||||||||||||    
T  193376 cttaacatgtgcaatattgcacatgttagacaaactc 193412  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 43528 - 43462
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattg--cacatgttagacaaac 311  Q
    ||||||||||||||||||||| |||| || |||||||| ||| |||||||  ||||||||||| ||||    
T  43528 ttttcaatgaaaaattactactttta-ttaccttaacacgtgcaatattgctcacatgttagagaaac 43462  T

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Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 51936 - 51908
Alignment:
Q  170 gtgcataaggatttccttatgcaccataa 198  Q
    |||||||||||||||||||||||||||||    
T  51936 gtgcataaggatttccttatgcaccataa 51908  T

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Target: scaffold0581 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 8421 - 8487
Alignment:
Q  141 atctgatggttgtaaagtgtttctgcatagtgcataagg-atttccttatgcaccataacttttgcc 206  Q
    ||||||||||||| | |||||| |||| ||||||||||| | |  ||||||||||||||||||||||    
T  8421 atctgatggttgtgatgtgtttatgcacagtgcataaggaaatggcttatgcaccataacttttgcc 8487  T

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Target: scaffold0571 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 576 - 547
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  576 gtgcataaggatttccttatgcaccataac 547  T

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Target: scaffold0516 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 1261 - 1290
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  1261 gtgcataaggatttccttatgcaccataac 1290  T

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Target: scaffold0249 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 23575 - 23546
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  23575 gtgcataaggatttccttatgcaccataac 23546  T

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Target: scaffold0249; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 198
Target Start/End: Original strand, 23748 - 23776
Alignment:
Q  170 gtgcataaggatttccttatgcaccataa 198  Q
    |||||||||||||||||||||||||||||    
T  23748 gtgcataaggatttccttatgcaccataa 23776  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 20133 - 20162
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  20133 gtgcataaggatttccttatgcaccataac 20162  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Complemental strand, 33647 - 33618
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  33647 gtgcataaggatttccttatgcaccataac 33618  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 24417 - 24446
Alignment:
Q  170 gtgcataaggatttccttatgcaccataac 199  Q
    ||||||||||||||||||||||||||||||    
T  24417 gtgcataaggatttccttatgcaccataac 24446  T

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Target: scaffold1450 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1450
Description:

Target: scaffold1450; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 199
Target Start/End: Complemental strand, 780 - 752
Alignment:
Q  171 tgcataaggatttccttatgcaccataac 199  Q
    |||||||||||||||||||||||||||||    
T  780 tgcataaggatttccttatgcaccataac 752  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 94131 - 94195
Alignment:
Q  246 ttttcaatgaaaaattactacatttagtttccttaacatgtgtaatattgcacatgttagacaaa 310  Q
    |||||||| |||| ||||||| |||||||   |||||||||| ||| ||||| ||||||||||||    
T  94131 ttttcaataaaaacttactacttttagttgatttaacatgtgcaatgttgcatatgttagacaaa 94195  T

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