View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14833_low_19 (Length: 333)
Name: NF14833_low_19
Description: NF14833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14833_low_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 114 - 333
Target Start/End: Complemental strand, 31471969 - 31471750
Alignment:
| Q |
114 |
agtataaaacaacttttgggtagaaacttctaccaacacaaaaaggccaaattcaagttagaccagaaacctaacaatgaatgcaaggtcgagaaacttg |
213 |
Q |
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| T |
31471969 |
agtataaaacaacttttgggtagaaacttttaccaacacaaaaaggccaaattcaagttagaccagaaacctaacaatgaatgcaaggtcgagaaacttg |
31471870 |
T |
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| Q |
214 |
aactctgttttctattcgaatgcttatcatcccattcaagctggaagcattgatggcaccgatattgttcctcacgataatgccatttttcgtgctcaac |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31471869 |
aactctgttttctattcgaatgcttatcatcccattcaagctggaagcattgatggcaccgatattgttcctcacgataatgccatttttcgtgctcaac |
31471770 |
T |
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| Q |
314 |
tttgttcctctattggcctc |
333 |
Q |
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|||||||||||||||||||| |
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| T |
31471769 |
tttgttcctctattggcctc |
31471750 |
T |
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