View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14835_high_10 (Length: 324)
Name: NF14835_high_10
Description: NF14835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14835_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 26469366 - 26469661
Alignment:
| Q |
5 |
tcgaagaatattagaatttaatttatatcaatggttgttca----taatgtgccaacttagcagtacaactttaattaatatgataaaaggactattact |
100 |
Q |
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| T |
26469366 |
tcgaataatattataatttaatttatatcaatggttgttcattcataatgtgccaagttagcagtacaactttaattaatattataaaaggactattagt |
26469465 |
T |
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| Q |
101 |
acacaactttggtcgatatgtcttgttagtgtaaaaatgtttgtgtaac-nnnnnnngaaggtaaatgtttgtataactaatttgttgtattaattctca |
199 |
Q |
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| T |
26469466 |
acacagctttggtcgatatgtcttgttagtgtaaaaatgtttgtgtaacttttttttgaaggtaaatgtttgtataactaatttgttgta--aattttca |
26469563 |
T |
|
| Q |
200 |
aaatatctcaactac-nnnnnnnnatattgcataccaatcaaactcaaaatattatatgtattttggattatatatgatgtacaaaagactagataatag |
298 |
Q |
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||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
26469564 |
aaatatctcaactactttttttttatattgcataccaatcaaactcaaaa---------tattttggattatatatgatgtacaaaagactagataatag |
26469654 |
T |
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