View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14835_low_18 (Length: 240)
Name: NF14835_low_18
Description: NF14835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14835_low_18 |
 |  |
|
| [»] scaffold0400 (2 HSPs) |
 |  |  |
|
| [»] scaffold0365 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 168; Significance: 4e-90; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15036684 - 15036461
Alignment:
| Q |
1 |
tttgttgctctgcctagttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
15036684 |
tttgttgctctgcctagttctggtggtattcttccagttaaattattaccggagatttttaggcttgtgagattcttgcactttccccaatttggagaaa |
15036585 |
T |
 |
| Q |
101 |
gatgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttgatcaag |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| |
|
|
| T |
15036584 |
gatgaccataaaaattattatcactcaagtccatgtagtccaagtttggatacacaccaaaactctctgttatatttccagtcagttggttttggttaag |
15036485 |
T |
 |
| Q |
201 |
cctcagtctcttaaggcttgagca |
224 |
Q |
| |
|
||||| ||||| |||||||||||| |
|
|
| T |
15036484 |
cctcaatctctcaaggcttgagca |
15036461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15010664 - 15010441
Alignment:
| Q |
1 |
tttgttgctctgcctagttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaa |
100 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||| |
|
|
| T |
15010664 |
tttgttgcacttcctagttctggtggtattcttcctgttaaattattaccagagatttttaggcttgtgagaatcttgcactttccccaatttggagaaa |
15010565 |
T |
 |
| Q |
101 |
gatgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttgatcaag |
200 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
15010564 |
gatgaccataaaaattattatcactcaattccatgtagtccaagtttggatacacaccaaaactctctgttatatttccagtaagttggttttgatcaag |
15010465 |
T |
 |
| Q |
201 |
cctcagtctcttaaggcttgagca |
224 |
Q |
| |
|
|||||||||| ||||||||||||| |
|
|
| T |
15010464 |
cctcagtctcgtaaggcttgagca |
15010441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15016779 - 15016556
Alignment:
| Q |
1 |
tttgttgctctgcctagttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
15016779 |
tttgttgctctgcctagttctggtggtatgcttcctgtcaaattattgttggagattttaaggcttgtgagattcttgcactttccccaatttggagaaa |
15016680 |
T |
 |
| Q |
101 |
gatgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttgatcaag |
200 |
Q |
| |
|
|||||||| |||||||||||||| || |||||||||| |||||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||| |
|
|
| T |
15016679 |
tttgaccatacaaattattatcactcaattccatgtagtccaagtttggatacacaccaaaactatttgttatatttccagtcagttggttttgttcaag |
15016580 |
T |
 |
| Q |
201 |
cctcagtctcttaaggcttgagca |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
15016579 |
cctcagtctcttaaggcttgagca |
15016556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15001771 - 15001548
Alignment:
| Q |
1 |
tttgttgctctgcctagttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
15001771 |
tttgttgctctgcctagttctggtggtatgcttcctgtcaaattattgttggagatttttaggcttgtgagattcttgcactttccccaatttggagaaa |
15001672 |
T |
 |
| Q |
101 |
gatgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttgatcaag |
200 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||| | ||| ||||||||||||||||| || |||||||||||||| |||||||||||||| | ||| |
|
|
| T |
15001671 |
gatgaccataaaaattattatcactcaaatccatgtattccaaatttggatacacaccaaagctgtctgttatatttccagtcagttggttttgttgaag |
15001572 |
T |
 |
| Q |
201 |
cctcagtctcttaaggcttgagca |
224 |
Q |
| |
|
|||| |||| ||||||||||||| |
|
|
| T |
15001571 |
tctcactctcgtaaggcttgagca |
15001548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15024781 - 15024558
Alignment:
| Q |
1 |
tttgttgctctgcctagttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaa |
100 |
Q |
| |
|
|||||||| |||||||| ||||||||||| |||||| ||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
15024781 |
tttgttgcgctgcctagctctggtggtattcttcctgttaaattattaccagagattttaaggcttgtgagattcttgcactttccccaatttggagaaa |
15024682 |
T |
 |
| Q |
101 |
gatgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttgatcaag |
200 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| |
|
|
| T |
15024681 |
gatgaccataaaaattattatcattcaagtccatgtagtacaagtttggatacacaccaaaactatttgttatatttccagtcagttggttttgatcaag |
15024582 |
T |
 |
| Q |
201 |
cctcagtctcttaaggcttgagca |
224 |
Q |
| |
|
||||| ||| ||||||||| |||| |
|
|
| T |
15024581 |
cctcactcttttaaggcttaagca |
15024558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15032122 - 15031899
Alignment:
| Q |
1 |
tttgttgctctgcctagttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaa |
100 |
Q |
| |
|
|||||||| |||||||| ||||||||||| |||||| ||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
15032122 |
tttgttgcgctgcctagctctggtggtattcttcctgttaaattattaccagagattttaaggcttgtgagattcttgcactttccccaatttggagaaa |
15032023 |
T |
 |
| Q |
101 |
gatgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttgatcaag |
200 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| |
|
|
| T |
15032022 |
gatgaccataaaaattattatcattcaagtccatgtagtacaagtttggatacacaccaaaactatttgttatatttccagtcagttggttttgatcaag |
15031923 |
T |
 |
| Q |
201 |
cctcagtctcttaaggcttgagca |
224 |
Q |
| |
|
||||| ||| ||||||||| |||| |
|
|
| T |
15031922 |
cctcactcttttaaggcttaagca |
15031899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 14523089 - 14523265
Alignment:
| Q |
18 |
ttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaagatgaccataaaaatta |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
14523089 |
ttctggtggtatgcttcctattaaattattattggagattttaaggcttgtcagattcttgcacttcccccaatttggagaaagataaccataaaaatta |
14523188 |
T |
 |
| Q |
118 |
ttatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttg |
194 |
Q |
| |
|
||||||||||| || ||||||| ||| |||||||||||||||||||| |||||||||||||| |||| || |||||| |
|
|
| T |
14523189 |
ttatcacttaattctatgtagtccaaatttggatacacaccaaaactatctgttatatttcctgtcattttgttttg |
14523265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 14467467 - 14467307
Alignment:
| Q |
1 |
tttgttgctctgcctagttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaa |
100 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||||| ||||||| |||||| ||||||| |||| ||||||||| |||| ||||||||||| || || | |
|
|
| T |
14467467 |
tttgttgctcggcctagttctggcggtatgcttcctgttaaattgttattgaagattttaaggcatgtgagattcatgcattttccccaattcggtgata |
14467368 |
T |
 |
| Q |
101 |
gatgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaa |
161 |
Q |
| |
|
|||| ||||| |||||||||||||| || |||||||||| ||| ||||||| ||| ||||| |
|
|
| T |
14467367 |
gatggccatacaaattattatcactcaattccatgtagtccaattttggatgcacgccaaa |
14467307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 15040403 - 15040200
Alignment:
| Q |
18 |
ttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaagatgaccataaaaatta |
117 |
Q |
| |
|
|||| ||||||| || ||| |||||||||| ||||||||||| |||| | ||||||| |||| ||||||||||| || |||| ||| ||| || | ||| |
|
|
| T |
15040403 |
ttctagtggtatactccctgttaaattattgttggagattttaaggcttatgagattcttgcgttttccccaattaggtgaaatatggccaaaatattta |
15040304 |
T |
 |
| Q |
118 |
ttatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttgatcaagcctcagtctcttaaggc |
217 |
Q |
| |
|
||| |||| || ||||||||||||||||||||| |||||||||| || |||||||||||||| | ||||||||||| ||||| |||| |||||| || | |
|
|
| T |
15040303 |
ttaccactcaattccatgtagtacaagtttggacacacaccaaagctatctgttatatttccagcaagttggttttgttcaagtctcactctctttagac |
15040204 |
T |
 |
| Q |
218 |
ttga |
221 |
Q |
| |
|
|||| |
|
|
| T |
15040203 |
ttga |
15040200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 14503629 - 14503468
Alignment:
| Q |
18 |
ttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaagatgaccataaaaatta |
117 |
Q |
| |
|
|||| ||||||| ||||| ||||||| |||||||||||||| |||| ||||||| | |||||||||||||||||||| || ||||| ||||| |||||| |
|
|
| T |
14503629 |
ttcttgtggtatatttcctgttaaattgttattggagattttaaggcttgtgagactcttgcactttccccaatttggtgatagatggccatacaaatta |
14503530 |
T |
 |
| Q |
118 |
ttatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcc |
179 |
Q |
| |
|
|| ||||| || |||||||||| ||| | |||||| |||||||||| |||||||||||||| |
|
|
| T |
14503529 |
ttttcactcaattccatgtagtccaaatgtggataaacaccaaaaccatctgttatatttcc |
14503468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 14533195 - 14533353
Alignment:
| Q |
3 |
tgttgctctgcctagttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaaga |
102 |
Q |
| |
|
|||||||| ||||||||| | ||||||||||| |||||||||| |||||||||| || | |||||| || |||||||| ||||||||||| || | | |
|
|
| T |
14533195 |
tgttgctccacctagttcttgaggtatgcttccagttaaattattgttggagatttgaagacttgtgagtttcttgcacttaccccaatttggtgatata |
14533294 |
T |
 |
| Q |
103 |
tgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaa |
161 |
Q |
| |
|
|| |||||||||||||||||||| || |||||||||| ||| ||||||||||| ||||| |
|
|
| T |
14533295 |
tggccataaaaattattatcactcaattccatgtagtccaaatttggatacacgccaaa |
14533353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 6134 - 5932
Alignment:
| Q |
22 |
ggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaagatgaccataaaaattattat |
121 |
Q |
| |
|
||||||||||||||| || |||||||||| | | ||| |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6134 |
ggtggtatgcttcctgatatattattattgaaaactttaaggcttgtgagattcttgcactttccccaatttggagagagatgaccataaaaattattat |
6035 |
T |
 |
| Q |
122 |
cacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttgatcaagcctcagtctcttaaggcttga |
221 |
Q |
| |
|
|||| || ||||| || | ||| || |||||||||||||| || |||||||||||| | |||||||||||||| | ||| |||| ||||||||||||||| |
|
|
| T |
6034 |
cactcaattccatatattccaaattcggatacacaccaaagctatctgttatatttgcagtcagttggttttgttgaagtctcactctcttaaggcttga |
5935 |
T |
 |
| Q |
222 |
gca |
224 |
Q |
| |
|
||| |
|
|
| T |
5934 |
gca |
5932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 12441 - 12265
Alignment:
| Q |
3 |
tgttgctctgcctagttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaaga |
102 |
Q |
| |
|
|||||||| ||||||||| | ||||||||||| |||||||||| |||||||||| || | |||||| || |||||||| ||||||||||| || | | |
|
|
| T |
12441 |
tgttgctccacctagttcttgcggtatgcttccagttaaattattgttggagatttgaagacttgtgagtttcttgcacttaccccaatttggtgatata |
12342 |
T |
 |
| Q |
103 |
tgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcc |
179 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||| ||| | |||||| |||||||||| |||||||||||||| |
|
|
| T |
12341 |
tggccataaaaattattatcacttaattccatgtagaccaaatgtggataaacaccaaaaccatctgttatatttcc |
12265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 6778 - 6576
Alignment:
| Q |
22 |
ggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaagatgaccataaaaattattat |
121 |
Q |
| |
|
||||||||||||||| || |||||||||| | | ||| |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6778 |
ggtggtatgcttcctgatatattattattgaaaactttaaggcttgtgagattcttgcactttccccaatttggagagagatgaccataaaaattattat |
6679 |
T |
 |
| Q |
122 |
cacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttgatcaagcctcagtctcttaaggcttga |
221 |
Q |
| |
|
|||| || ||||| || | ||| || |||||||||||||| || |||||||||||| | |||||||||||||| | ||| |||| ||||||||||||||| |
|
|
| T |
6678 |
cactcaattccatatattccaaattcggatacacaccaaagctatctgttatatttgcagtcagttggttttgttgaagtctcactctcttaaggcttga |
6579 |
T |
 |
| Q |
222 |
gca |
224 |
Q |
| |
|
||| |
|
|
| T |
6578 |
gca |
6576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 13084 - 12908
Alignment:
| Q |
3 |
tgttgctctgcctagttctggtggtatgcttcctattaaattattattggagatttttaggcctgtgagatttttgcactttccccaatttggagaaaga |
102 |
Q |
| |
|
|||||||| ||||||||| | ||||||||||| |||||||||| |||||||||| || | |||||| || |||||||| ||||||||||| || | | |
|
|
| T |
13084 |
tgttgctccacctagttcttgcggtatgcttccagttaaattattgttggagatttgaagacttgtgagtttcttgcacttaccccaatttggtgatata |
12985 |
T |
 |
| Q |
103 |
tgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcc |
179 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||| ||| | |||||| |||||||||| |||||||||||||| |
|
|
| T |
12984 |
tggccataaaaattattatcacttaattccatgtagaccaaatgtggataaacaccaaaaccatctgttatatttcc |
12908 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 16102468 - 16102338
Alignment:
| Q |
79 |
cactttccccaatttggagaaagatgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttc |
178 |
Q |
| |
|
|||||||||||||| | ||||| || || |||||||| || ||||||||||| ||||| | ||| |||||||| |||| |||| | ||||||||||| |
|
|
| T |
16102468 |
cactttccccaattcgatgaaaggtgtccgtaaaaattgttttcacttaagtctatgtaattcaaatttggataaacactaaaatcttgtgttatatttc |
16102369 |
T |
 |
| Q |
179 |
ccgtcagttggttttgatcaagcctcagtct |
209 |
Q |
| |
|
| || ||||||||||| ||||| || ||||| |
|
|
| T |
16102368 |
cagtaagttggttttggtcaagtctaagtct |
16102338 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 16172146 - 16172016
Alignment:
| Q |
79 |
cactttccccaatttggagaaagatgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttc |
178 |
Q |
| |
|
|||||||||||||| | ||||| || || |||||||| || ||||||||||| ||||| | ||| |||||||| |||| |||| | ||||||||||| |
|
|
| T |
16172146 |
cactttccccaattcgatgaaaggtgtccgtaaaaattgttttcacttaagtctatgtaattcaaatttggataaacactaaaatcttgtgttatatttc |
16172047 |
T |
 |
| Q |
179 |
ccgtcagttggttttgatcaagcctcagtct |
209 |
Q |
| |
|
| || ||||||||||| ||||| || ||||| |
|
|
| T |
16172046 |
cagtaagttggttttggtcaagtctaagtct |
16172016 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 17848090 - 17847993
Alignment:
| Q |
106 |
ccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaaactctctgttatatttcccgtcagttggttttgatcaagcct |
203 |
Q |
| |
|
|||||||||||||| | ||| || | |||||| | ||| || |||||||||||||| |||||||||||||| | ||||||||||| |||||||| |
|
|
| T |
17848090 |
ccataaaaattattttgactcaaatgcatgtaatccaaattcggatacacaccaaagaaatctgttatatttccagaaagttggttttgttcaagcct |
17847993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 17826625 - 17826689
Alignment:
| Q |
97 |
gaaagatgaccataaaaattattatcacttaagtccatgtagtacaagtttggatacacaccaaa |
161 |
Q |
| |
|
||||| || |||||||||| ||| ||||| || | |||||||||||| ||||||| ||||||||| |
|
|
| T |
17826625 |
gaaaggtggccataaaaatgattttcactcaactgcatgtagtacaaatttggatgcacaccaaa |
17826689 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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