View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14836_high_1 (Length: 724)

Name: NF14836_high_1
Description: NF14836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14836_high_1
NF14836_high_1
[»] chr8 (10 HSPs)
chr8 (17-708)||(7100378-7101073)
chr8 (211-694)||(7086780-7087263)
chr8 (219-609)||(7069799-7070189)
chr8 (133-202)||(7087320-7087389)
chr8 (399-535)||(7078397-7078533)
chr8 (626-701)||(7078231-7078306)
chr8 (122-203)||(7070253-7070331)
chr8 (392-545)||(7021085-7021238)
chr8 (399-495)||(7028695-7028791)
chr8 (399-495)||(7035397-7035493)
[»] chr4 (8 HSPs)
chr4 (391-530)||(3953034-3953173)
chr4 (414-546)||(4220718-4220850)
chr4 (414-530)||(3821496-3821612)
chr4 (393-529)||(4003233-4003369)
chr4 (414-529)||(4011712-4011827)
chr4 (425-545)||(3916026-3916146)
chr4 (425-529)||(4026469-4026573)
chr4 (414-545)||(3811908-3812039)
[»] chr5 (1 HSPs)
chr5 (384-530)||(13399073-13399219)
[»] chr6 (1 HSPs)
chr6 (427-464)||(12782174-12782211)


Alignment Details
Target: chr8 (Bit Score: 554; Significance: 0; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 554; E-Value: 0
Query Start/End: Original strand, 17 - 708
Target Start/End: Complemental strand, 7101073 - 7100378
Alignment:
Q  17 aatattctgtctctacatata--caaagtggtccaattggtgggaaaatttatggaagcaatagtagtcaaatatggctgtttgacatgaattaattata 114  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7101073 aatattctgtctctatatatatacaaagtggtccaattggtgggaaaatttatggaagcaatagtagtcaaatatagctgtttgacatgaattaactata 7100974  T
Q  115 tcatcttatcttatgtatagtagagagacaaaggaagaaccacaatgcacaataataatcttgtattttttgtttatctcttgtttatcagtttgacatc 214  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  7100973 tcatcttatcttatgtagagtagagagacaaaggaagaaccacaatgcacaataataatcttgtattttttgtttatctcttgtgtatctgtttgacatc 7100874  T
Q  215 ggaatttcaatgttctgttcctcaaagtga--caagcatgatgtttttgttagctttagaggtctagatatccgtgaaggttttcttagccatttggttg 312  Q
    |||||||||||||| |||||||||| ||||  |||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7100873 ggaatttcaatgttttgttcctcaacgtgagacaagtatgatgtctttgttagctttagaggtctagatatccttgaaggttttcttagccatttggttg 7100774  T
Q  313 aagctctatctcgaaagaaaattgttttctttgtagacaataagcttagaaaaggtgatgaaatagcagaatcacttcttgaagctattgaaaaatcctt 412  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||    
T  7100773 aagctttatctcgaaagaaaattgttttctttgtagacaataagcttagaaaaggtgatgaaatagcacaatcacttcttgaaactattgaaacatcgtt 7100674  T
Q  413 gatttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagagagaaagatggacagatt 512  Q
    ||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||  | |||||||||||||||||||| |||||||||||||| |||    
T  7100673 gatttctttggtcatattctctcaaaactatgcttcttcgtcgtggtgtttggatgagttagtcaaaattgttgagtgtagggagaaagatggacatatt 7100574  T
Q  513 ttattgcctgttttctacaaagttgatcctacaattgtgaggcatcagaagggaacttatgcagatgaatttgtcgaacatgacaaaaagtacaattcaa 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  7100573 ttattgcctgttttctacaaagttgatcctacaattgtgaggcatcagaagggaacttatgcaaatgaatttgttgaacatgacaaaaagtacaattcaa 7100474  T
Q  613 ttagggtgaaacagtggagatctgctttgaagaaatctgcagatatctcaggctttcattcatcacaatttttgtaagttttgttttactctattt 708  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  7100473 gtagggtgaaacagtggagatctgctttgaagaaatctgcagatatctctggttttcattcatcacaatttttgtaagttttgttttactctattt 7100378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 211 - 694
Target Start/End: Complemental strand, 7087263 - 7086780
Alignment:
Q  211 catcggaatttcaatgttctgttcctcaaagtgacaagcatgatgtttttgttagctttagaggtctagatatccgtgaaggttttcttagccatttggt 310  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||| ||||||||    
T  7087263 catcggaatttcaatgttcagttcctcaaagtgacaagcatgatgtctttgttagctttagaggtctggacatccgtgaaggttttcttagtcatttggt 7087164  T
Q  311 tgaagctctatctcgaaagaaaattgttttctttgtagacaataagcttagaaaaggtgatgaaatagcagaatcacttcttgaagctattgaaaaatcc 410  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||     
T  7087163 tgaagctttatctcgaaaggaaattgttttctttgtagacaataagcttagaaaaggtgatgaaatagcacaatcactttttgaagctattgaaacatct 7087064  T
Q  411 ttgatttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagagagaaagatggacaga 510  Q
    |  ||||| || | ||||||||||||||||||||||||||||   |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  7087063 tcaatttcattagtcatattctctcaaaactatgcttcttcaaaatggtgtttggatgagcttgtcaaaattgttgagtgtagagagaaagatggacaga 7086964  T
Q  511 ttttattgcctgttttctacaaagttgatcctacaattgtgaggcatcagaagggaacttatgcagatgaatttgtcgaacatgacaaaaagtacaattc 610  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||| ||| |||||  ||||||||  ||||||||||||     
T  7086963 ttttattgcctgttttttacaaagttgaccctacagttgtgaggcatcagaaggggacttatgcaaatgcatttgcagaacatgaacaaaagtacaattt 7086864  T
Q  611 aattagggtgaaacagtggagatctgctttgaagaaatctgcagatatctcaggctttcattcatcacaatttttgtaagtttt 694  Q
     |  | ||||||||||||||||    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7086863 gaacaaggtgaaacagtggagaagctctttgaagaaatctgcagatatctcagggtttcattcatcacaatttttgtaagtttt 7086780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 219 - 609
Target Start/End: Complemental strand, 7070189 - 7069799
Alignment:
Q  219 tttcaatgttctgttcctcaaagtgacaagcatgatgtttttgttagctttagaggtctagatatccgtgaaggttttcttagccatttggttgaagctc 318  Q
    ||||||| |||||||||||||| | ||||| ||||||| |||||||||||| | |||| |||||||||||||| |||||||   |||||| || |||||     
T  7070189 tttcaatcttctgttcctcaaattcacaagtatgatgtctttgttagctttcggggtccagatatccgtgaagtttttcttcctcatttgattaaagctt 7070090  T
Q  319 tatctcgaaagaaaattgttttctttgtagacaataagcttagaaaaggtgatgaaatagcagaatcacttcttgaagctattgaaaaatccttgatttc 418  Q
    | |||| |||||||||||||| |||||||||| ||||||||| ||||||  |||||||| || | |||||| ||||||| ||||||| ||| |  |||||    
T  7070089 tttctcaaaagaaaattgtttactttgtagactataagcttacaaaaggaaatgaaatatcacagtcactttttgaagcaattgaaacatcttcaatttc 7069990  T
Q  419 tttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagagagaaagatggacagattttattg 518  Q
     || | ||||||||||||||||||||||||||||||||||||||||| ||| || |||||| ||||||| |||||||||||||||||| | |||||||||    
T  7069989 attagtcatattctctcaaaactatgcttcttcatcttggtgtttggatgagctggtcaaagttgttgactgtagagagaaagatggaaacattttattg 7069890  T
Q  519 cctgttttctacaaagttgatcctacaattgtgaggcatcagaagggaacttatgcagatgaatttgtcgaacatgacaaaaagtacaatt 609  Q
    ||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||| |||||| ||||||||  ||||||||||||    
T  7069889 cctgttttctacaaagttgatcccacaattgtgaggcatcaaaatggaacttatgcagatgcatttgttgaacatgaacaaaagtacaatt 7069799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 7087389 - 7087320
Alignment:
Q  133 agtagagagacaaaggaagaaccacaatgcacaataataatcttgtattttttgtttatctcttgtttat 202  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  7087389 agtagagacacaaaggaagatccacaatgcacaatattaatcttgtattttttgtttgtctcttgtttat 7087320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 399 - 535
Target Start/End: Complemental strand, 7078533 - 7078397
Alignment:
Q  399 attgaaaaatccttgatttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagagaga 498  Q
    ||||||||||| || ||||| ||||  |||||||||| ||||| ||| ||||||| ||||||| |||  || ||||| ||||| |||||||||||||| |    
T  7078533 attgaaaaatcattcatttcattggttatattctctccaaactttgcatcttcatattggtgtatggaggagcttgtgaaaatagttgagtgtagagaaa 7078434  T
Q  499 aagatggacagattttattgcctgttttctacaaagt 535  Q
    || ||||   |||| || |||| ||||||||| ||||    
T  7078433 aatatggtaggattctaatgccagttttctaccaagt 7078397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 626 - 701
Target Start/End: Complemental strand, 7078306 - 7078231
Alignment:
Q  626 gtggagatctgctttgaagaaatctgcagatatctcaggctttcattcatcacaatttttgtaagttttgttttac 701  Q
    ||||||||||||||||||| |||||||| |||| || || ||| ||||||||||||||| |||||| || ||||||    
T  7078306 gtggagatctgctttgaagcaatctgcaaatatttctggatttgattcatcacaattttcgtaagtgttcttttac 7078231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 7070331 - 7070253
Alignment:
Q  122 atcttatgtatagtagagagacaaaggaagaaccacaatgcacaataataatcttgtattttttgtttatctcttgtttatc 203  Q
    |||||||||| |||||||||||||||||| | |||||||||||   | ||||| || ||||||||||| ||| |||||||||    
T  7070331 atcttatgtagagtagagagacaaaggaaaatccacaatgcac---attaatcgtgcattttttgtttgtcttttgtttatc 7070253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 545
Target Start/End: Original strand, 7021085 - 7021238
Alignment:
Q  392 tgaagctattgaaaaatccttgatttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgt 491  Q
    |||||| ||||||||||| || |||  ||||| ||||||||||| ||||| | | | ||||  ||||||||||| ||| ||||| ||||| ||||| ||     
T  7021085 tgaagcaattgaaaaatcattcattcatttggtcatattctctccaaacttttcatattcacattggtgtttggatgagcttgtgaaaatagttgattgc 7021184  T
Q  492 agagagaaagatggacagattttattgcctgttttctacaaagttgatcctaca 545  Q
    ||||  ||| |||    |||| ||||||| ||||||||| |||| |||||||||    
T  7021185 agagcaaaatatgataggattctattgccagttttctaccaagtagatcctaca 7021238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 495
Target Start/End: Original strand, 7028695 - 7028791
Alignment:
Q  399 attgaaaaatccttgatttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagag 495  Q
    ||||||||||| |||||||| |||| |||||| |||| ||||| ||| ||||||  |||||||||||  || ||||| ||||| || ||||| ||||    
T  7028695 attgaaaaatcattgatttcattggtcatattttctccaaactttgcatcttcacattggtgtttggacgagcttgtgaaaatagtcgagtgcagag 7028791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 495
Target Start/End: Original strand, 7035397 - 7035493
Alignment:
Q  399 attgaaaaatccttgatttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagag 495  Q
    ||||||||||| |||||||| |||| |||||| || | ||||| ||| ||||||  ||||||||||| ||| ||||| ||||| || ||||| ||||    
T  7035397 attgaaaaatcattgatttcattggtcatattttcaccaaactttgcatcttcacattggtgtttggatgagcttgtgaaaatagtcgagtgcagag 7035493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 5e-18; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 391 - 530
Target Start/End: Original strand, 3953034 - 3953173
Alignment:
Q  391 ttgaagctattgaaaaatccttgatttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtg 490  Q
    ||||||| ||||||  ||| || ||||| |||  |||||||||  |||||||||||||||||  ||||||||| |  |||||||| |||||  |||||||    
T  3953034 ttgaagcaattgaaggatcgttcatttcattgatcatattctcagaaaactatgcttcttcacgttggtgtttagaagaacttgtgaaaataattgagtg 3953133  T
Q  491 tagagagaaagatggacagattttattgcctgttttctac 530  Q
     ||||||||| ||||||||||| || | ||||||||||||    
T  3953134 cagagagaaaaatggacagattgtaatacctgttttctac 3953173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 414 - 546
Target Start/End: Complemental strand, 4220850 - 4220718
Alignment:
Q  414 atttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagagagaaagatggacagattt 513  Q
    ||||| |||| |||||||||| |||||||||||||||||  ||||||||| |  |||||||| |||||  ||||||| ||||||||| |||||||  ||     
T  4220850 atttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggacaacttg 4220751  T
Q  514 tattgcctgttttctacaaagttgatcctacaa 546  Q
    || | ||| |||||||| | || ||||||||||    
T  4220750 taatacctattttctacgaggtagatcctacaa 4220718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 414 - 530
Target Start/End: Complemental strand, 3821612 - 3821496
Alignment:
Q  414 atttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagagagaaagatggacagattt 513  Q
    ||||| |||| |||||||||  |||||||||||||||||  ||||||||| | ||| ||||| |||||  | ||||| | ||||||| |||||||||||     
T  3821612 atttcattggtcatattctcaaaaaactatgcttcttcacattggtgtttagatgagcttgtgaaaataatcgagtgcaaagagaaatatggacagattg 3821513  T
Q  514 tattgcctgttttctac 530  Q
    |||| ||| ||||||||    
T  3821512 tattacctattttctac 3821496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 393 - 529
Target Start/End: Complemental strand, 4003369 - 4003233
Alignment:
Q  393 gaagctattgaaaaatccttgatttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgta 492  Q
    ||||| ||||||  ||| || ||||| |||| |||||||||  |||||||||||||||||  ||||||||| |  |||||||| |||||  ||||||| |    
T  4003369 gaagcaattgaaggatcattcatttcattggtcatattctcagaaaactatgcttcttcacattggtgtttagaagaacttgtgaaaataattgagtgca 4003270  T
Q  493 gagagaaagatggacagattttattgcctgttttcta 529  Q
     ||||||| |||||| |||| | || |||||||||||    
T  4003269 aagagaaatatggacggattgttttacctgttttcta 4003233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 414 - 529
Target Start/End: Complemental strand, 4011827 - 4011712
Alignment:
Q  414 atttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagagagaaagatggacagattt 513  Q
    ||||| |||| |||||||||  |||||||||||| ||||  ||||||||| |  |||||||  |||||  ||||||| | ||||||| |||||||||||     
T  4011827 atttcattggtcatattctcataaaactatgcttgttcacattggtgtttagaagaacttgcgaaaataattgagtgcaaagagaaatatggacagattg 4011728  T
Q  514 tattgcctgttttcta 529  Q
    || | |||||||||||    
T  4011727 taatacctgttttcta 4011712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 545
Target Start/End: Original strand, 3916026 - 3916146
Alignment:
Q  425 catattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagagagaaagatggacagattttattgcctgtt 524  Q
    |||||||||  |||||||||||| ||||  |||||||||    |||||||| ||||| |||||||||| ||||||| ||| ||| ||| || | ||||||    
T  3916026 catattctcagaaaactatgcttgttcacattggtgtttaaaagaacttgtgaaaatagttgagtgtaaagagaaatatgcacaaattgtaatacctgtt 3916125  T
Q  525 ttctacaaagttgatcctaca 545  Q
    |||| ||  || |||||||||    
T  3916126 ttcttcagggtagatcctaca 3916146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 529
Target Start/End: Complemental strand, 4026573 - 4026469
Alignment:
Q  425 catattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagagagaaagatggacagattttattgcctgtt 524  Q
    |||||||||  |||||||||||||||||  ||||||||| |  |||||| | |||||  |||| || | ||||||| ||||||||||| || | ||||||    
T  4026573 catattctcagaaaactatgcttcttcaagttggtgtttagaagaacttttgaaaataattgattgcaaagagaaatatggacagattgtaatacctgtt 4026474  T
Q  525 ttcta 529  Q
    |||||    
T  4026473 ttcta 4026469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 545
Target Start/End: Complemental strand, 3812039 - 3811908
Alignment:
Q  414 atttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattgttgagtgtagagagaaagatggacagattt 513  Q
    ||||| |||| |||||||||  |||||||||||||||||  ||||||||| | ||| ||||| |||||  ||||||| | ||||| | |||||||  ||     
T  3812039 atttcattggtcatattctcagaaaactatgcttcttcacattggtgtttagatgagcttgtgaaaataattgagtgcaaagagacatatggacattttg 3811940  T
Q  514 tattgcctgttttctacaaagttgatcctaca 545  Q
    || | ||| ||||||||  ||| |||||||||    
T  3811939 taatacctattttctacggagtagatcctaca 3811908  T

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Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 384 - 530
Target Start/End: Complemental strand, 13399219 - 13399073
Alignment:
Q  384 tcacttcttgaagctattgaaaaatccttgatttctttggacatattctctcaaaactatgcttcttcatcttggtgtttggttgaacttgtcaaaattg 483  Q
    |||||| ||||||| || |||  ||| || ||||| |||  |||||||||  |||||||||||||||||  ||||||||| |  |||||||| |||||      
T  13399219 tcactttttgaagcaatcgaaggatcatttatttcattgatcatattctcagaaaactatgcttcttcacgttggtgtttagaagaacttgtgaaaataa 13399120  T
Q  484 ttgagtgtagagagaaagatggacagattttattgcctgttttctac 530  Q
    ||||||| | ||||||| ||||||| ||| || | ||||||||||||    
T  13399119 ttgagtgcaaagagaaatatggacaaattgtaatacctgttttctac 13399073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 464
Target Start/End: Complemental strand, 12782211 - 12782174
Alignment:
Q  427 tattctctcaaaactatgcttcttcatcttggtgtttg 464  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  12782211 tattctctaaaaactatgcttcttcaacttggtgtttg 12782174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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