View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14836_high_28 (Length: 227)
Name: NF14836_high_28
Description: NF14836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14836_high_28 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 82 - 227
Target Start/End: Original strand, 28600758 - 28600903
Alignment:
| Q |
82 |
acctaaacacaaataagaaacttacggagggtataaacatgatctttggaagagttgtatttgacatgtaaaatgattatagaaatatttggatgagaat |
181 |
Q |
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| T |
28600758 |
acctaaacacaaataagaaacttacggagggtataaacatgatctttggaagagttgtatttgacatgtaaaatgattatagaaatatttggatgagaat |
28600857 |
T |
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| Q |
182 |
tccatttcttgagaacccaatccaatgtttgaaatccatctaacac |
227 |
Q |
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| T |
28600858 |
tccatttcttgagagcccaatccaatgtttgaaatccatctaacac |
28600903 |
T |
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