View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14836_low_16 (Length: 320)
Name: NF14836_low_16
Description: NF14836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14836_low_16 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 17650586 - 17650899
Alignment:
| Q |
1 |
ctagcttcacctatgattgtacttatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttgatca |
100 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| | ||||||||||||||| |
|
|
| T |
17650586 |
ctagcttcacctatgaatgtacttatgatgttttcctcagttttagaggcatagatacccgcaacactttcactggtagcctctacaattctcttgatca |
17650685 |
T |
 |
| Q |
101 |
aaaaggtattcatacgttcattgatgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacatt |
200 |
Q |
| |
|
|||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
17650686 |
aaaaggtattcacactttcattgatgaaaaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagctattcaacaatctagaatctacatt |
17650785 |
T |
 |
| Q |
201 |
gttgttttctctagcaactatgcttcatcaactttttgcttgaatgaacttgtcatgatccttgactgttccaacacacatagacgcttgcttttgccag |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | |
|
|
| T |
17650786 |
gttgttttctctagcaactatgcttcatcaactttttgcttgaatgaacttgtcatgatccttgagtgttccaacacacgtagacgcttgcttttgccgg |
17650885 |
T |
 |
| Q |
301 |
tttttgatgatgtc |
314 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
17650886 |
ttttttatgatgtc |
17650899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 24 - 314
Target Start/End: Original strand, 17641945 - 17642235
Alignment:
| Q |
24 |
tatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttgatcaaaaaggtattcatacgttcattg |
123 |
Q |
| |
|
|||||||||||| ||||||||||||| | ||||||||||||||||||||| |||| ||| | |||||||||||||||||| |||||||| || ||| ||| |
|
|
| T |
17641945 |
tatgatgttttcatcagttttagaggaatagatacccgcaacactttcactggtaacctctacaattctcttgatcaaaagggtattcacactttccttg |
17642044 |
T |
 |
| Q |
124 |
atgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacattgttgttttctctagcaactatgc |
223 |
Q |
| |
|
||||||||||||||||||| |||||| |||| |||| | ||||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |
|
|
| T |
17642045 |
atgaagaagaaattcaaaaaggagaacaaataacacgagcactttttcaagcaattcaacaatctaggattttcattgttgttttctctaacaactatgc |
17642144 |
T |
 |
| Q |
224 |
ttcatcaactttttgcttgaatgaacttgtcatgatccttgactgttccaacacacatagacgcttgcttttgccagtttttgatgatgtc |
314 |
Q |
| |
|
||| ||||||||||| ||||||||||||| | |||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||| |
|
|
| T |
17642145 |
ttcctcaactttttgtttgaatgaacttgccgtgatccttgagtgttccaacacacatggacgcttgcttttgcccgttttttatgatgtc |
17642235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 24 - 310
Target Start/End: Original strand, 17698643 - 17698929
Alignment:
| Q |
24 |
tatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttgatcaaaaaggtattcatacgttcattg |
123 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||||||| |||||| | ||||| | || |||||||||||| |||||||| || ||| ||| |
|
|
| T |
17698643 |
tatgatgttttcatcagttttagaggcatagatacccgcaacaatttcacgcgcgacctttacgatattcttgatcaaaacggtattcacactttctttg |
17698742 |
T |
 |
| Q |
124 |
atgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacattgttgttttctctagcaactatgc |
223 |
Q |
| |
|
||||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||||| |
|
|
| T |
17698743 |
atgaacaagaaattcaaaaaggagaagagatcacaccatcacttcttcaagctattcaacaatctagaattttcattgttgttttctctaacaactatgc |
17698842 |
T |
 |
| Q |
224 |
ttcatcaactttttgcttgaatgaacttgtcatgatccttgactgttccaacacacatagacgcttgcttttgccagtttttgatga |
310 |
Q |
| |
|
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
17698843 |
ttcctctactttttgcttgaatgaacttgtcatgatccttgactgttccaacacacatagacgcttgcttttgccggttttttatga |
17698929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 24 - 314
Target Start/End: Original strand, 17660814 - 17661104
Alignment:
| Q |
24 |
tatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttgatcaaaaaggtattcatacgttcattg |
123 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||||||| ||||||| || ||| | | || |||| ||||||| |||||||| || ||| ||| |
|
|
| T |
17660814 |
tatgatgttttcatcagttttagaggcatagatacccgcaacaatttcacccgtgacctctacgatattctttatcaaaacggtattcacactttctttg |
17660913 |
T |
 |
| Q |
124 |
atgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacattgttgttttctctagcaactatgc |
223 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |
|
|
| T |
17660914 |
atgaagaacaaattcaaaagggagaagagatcacaccagcactttttcaagcaattcaacaatctaggattttcattgttgttttctctaacaactatgc |
17661013 |
T |
 |
| Q |
224 |
ttcatcaactttttgcttgaatgaacttgtcatgatccttgactgttccaacacacatagacgcttgcttttgccagtttttgatgatgtc |
314 |
Q |
| |
|
||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| |
|
|
| T |
17661014 |
ttcctcaactttttgtttgaatgaacttgttgtgatccttgactgttccaacacacatggacgcttgcttttgcctgttttttatgatgtc |
17661104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 24 - 314
Target Start/End: Original strand, 17711855 - 17712145
Alignment:
| Q |
24 |
tatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttgatcaaaaaggtattcatacgttcattg |
123 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||||||| ||||||| || ||||| | || |||||||||||| |||||||| || ||| ||| |
|
|
| T |
17711855 |
tatgatgttttcatcagttttagaggcatagatacccgcaacaatttcacccgtgacctttacgatattcttgatcaaaacggtattcacactttctttg |
17711954 |
T |
 |
| Q |
124 |
atgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacattgttgttttctctagcaactatgc |
223 |
Q |
| |
|
||||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||| |
|
|
| T |
17711955 |
atgaacaagaaattcaaaaaggagaagagatcacaccatcacttcttcaagctattcaacaatctaggattttcattgttgttttctctaacaactatgc |
17712054 |
T |
 |
| Q |
224 |
ttcatcaactttttgcttgaatgaacttgtcatgatccttgactgttccaacacacatagacgcttgcttttgccagtttttgatgatgtc |
314 |
Q |
| |
|
||| || |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| || ||| |||||||| |
|
|
| T |
17712055 |
ttcctctactttttgtttgaatgaacttgtcatgatccttgagtgttccaacacacatggacgcttgtttttgcctgtattttatgatgtc |
17712145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 24 - 314
Target Start/End: Original strand, 17616993 - 17617283
Alignment:
| Q |
24 |
tatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttgatcaaaaaggtattcatacgttcattg |
123 |
Q |
| |
|
|||||||||||| ||||||||||||| | |||||||||||||| ||||||| || ||| | | ||||||| |||||||| |||||||| || ||| ||| |
|
|
| T |
17616993 |
tatgatgttttcatcagttttagaggtatagatacccgcaacaatttcacccgtgacctctacgattctctagatcaaaacggtattcacactttctttg |
17617092 |
T |
 |
| Q |
124 |
atgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacattgttgttttctctagcaactatgc |
223 |
Q |
| |
|
||||| || |||||||||| |||||| |||| |||||| | ||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |
|
|
| T |
17617093 |
atgaaaaacaaattcaaaaaggagaacaaattacaccagccctttttcaagcaattcaacaatctaggattttcattgttgttttctctaacaactatgc |
17617192 |
T |
 |
| Q |
224 |
ttcatcaactttttgcttgaatgaacttgtcatgatccttgactgttccaacacacatagacgcttgcttttgccagtttttgatgatgtc |
314 |
Q |
| |
|
||| || |||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| |
|
|
| T |
17617193 |
ttcctctactttttgtttgaatgaacttgccttgatccttgactgttccaacacacatggacgcttgcttttgcccgttttttatgatgtc |
17617283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 17722317 - 17722455
Alignment:
| Q |
2 |
tagcttcacctatgattgtacttatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttgatcaa |
101 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||| |||||||| ||||||||||| ||| | || |||||||||||| |
|
|
| T |
17722317 |
tagcttcacctatgattgtacttgtgatgttttccttagtttcagaggcatagatatccgcaacagtttcaccggtaacctctacaggtctcttgatcaa |
17722416 |
T |
 |
| Q |
102 |
aaaggtattcatacgttcattgatgaagaagaaattcaa |
140 |
Q |
| |
|
|| |||||||| || |||||||||| ||||||||||||| |
|
|
| T |
17722417 |
aagggtattcacactttcattgatgtagaagaaattcaa |
17722455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 17707920 - 17708058
Alignment:
| Q |
2 |
tagcttcacctatgattgtacttatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttgatcaa |
101 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||| |||||||| ||||||||||| ||| | || |||||||||||| |
|
|
| T |
17707920 |
tagcttcacctatgattgtacttgtgatgttttccttagtttcagaggcatagatatccgcaacagtttcaccggtaacctctacaggtctcttgatcaa |
17708019 |
T |
 |
| Q |
102 |
aaaggtattcatacgttcattgatgaagaagaaattcaa |
140 |
Q |
| |
|
|| |||||||| || |||||||||| |||||| |||||| |
|
|
| T |
17708020 |
aagggtattcacactttcattgatgtagaagatattcaa |
17708058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 265
Target Start/End: Complemental strand, 5925020 - 5924773
Alignment:
| Q |
21 |
acttatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttga---tcaaaaaggtattcatacgt |
117 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||| |||| ||||| |||| || | ||| ||||| | ||||| |||||| || || | |
|
|
| T |
5925020 |
acttatgatgttttcctcaattttagaggcaaagatacccgaaacaacttcactggtaatctctacaactctctacaaaatcaaagaggtatacaaactt |
5924921 |
T |
 |
| Q |
118 |
tcattgatgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacattgttgttttctctagcaa |
217 |
Q |
| |
|
| || ||||| |||||||||||||| ||||||||||||||||| | ||||||||||| ||| || |||||||||| | ||||| | ||||||| || |
|
|
| T |
5924920 |
ttatggatgatgaagaaattcaaaaaggagaagaaatcacacctactcttcttcaagccattgaagaatctaggattttcattgctattttctcacctaa |
5924821 |
T |
 |
| Q |
218 |
ctatgcttcatcaactttttgcttgaatgaacttgtcatgatccttga |
265 |
Q |
| |
|
|||||| || ||||| ||||| |||| ||||||||||| |||||||| |
|
|
| T |
5924820 |
ctatgcatcttcaacgttttgtttgactgaacttgtcaccatccttga |
5924773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 253
Target Start/End: Complemental strand, 5918692 - 5918460
Alignment:
| Q |
21 |
acttatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttgatcaaaaaggtattcatacgttca |
120 |
Q |
| |
|
||||||||||| || |||||||||||||||| || || | |||| ||||| |||| ||| | ||||||||| |||||| |||||| | || ||| |
|
|
| T |
5918692 |
acttatgatgtctttctcagttttagaggcattgacacaagaaacaacttcactggtaacctctacaattctctcaatcaaagaggtatacgaacattct |
5918593 |
T |
 |
| Q |
121 |
ttgatgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacattgttgttttctctagcaacta |
220 |
Q |
| |
|
||||||| |||||||| ||||| ||||||||||| ||||| | ||||||||||| || || |||| || || | |||||||||||| || | ||||| |
|
|
| T |
5918592 |
ttgatgatgaagaaatacaaaaaggagaagaaattacacctactcttcttcaagccatcaaagaatccagaattttcattgttgttttttccactaacta |
5918493 |
T |
 |
| Q |
221 |
tgcttcatcaactttttgcttgaatgaacttgt |
253 |
Q |
| |
|
||| || |||||||| || |||| ||||||||| |
|
|
| T |
5918492 |
tgcatcttcaactttctgtttgactgaacttgt |
5918460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 5978247 - 5978091
Alignment:
| Q |
97 |
atcaaaaaggtattcatacgttcattgatgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatcta |
196 |
Q |
| |
|
|||||| |||||| || || || || ||||| |||||||||||||| ||||||||||||||||| | ||||||||||| ||| |||||||||| || | |
|
|
| T |
5978247 |
atcaaagaggtatacaaacttttatggatgatgaagaaattcaaaaaggagaagaaatcacacctactcttcttcaagccattaaacaatctagaatttt |
5978148 |
T |
 |
| Q |
197 |
cattgttgttttctctagcaactatgcttcatcaactttttgcttgaatgaacttgt |
253 |
Q |
| |
|
||||| | ||||||| |||||||| || ||||| ||||| |||| ||||||||| |
|
|
| T |
5978147 |
cattgctattttctcccctaactatgcatcttcaacgttttgtttgactgaacttgt |
5978091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 5984220 - 5984064
Alignment:
| Q |
97 |
atcaaaaaggtattcatacgttcattgatgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatcta |
196 |
Q |
| |
|
|||||| |||||| || || || || ||||| |||||||||||||| ||||||||||||||||| | ||||||||||| ||| |||||||||| || | |
|
|
| T |
5984220 |
atcaaagaggtatacaaacttttatggatgatgaagaaattcaaaaaggagaagaaatcacacctactcttcttcaagccattaaacaatctagaatttt |
5984121 |
T |
 |
| Q |
197 |
cattgttgttttctctagcaactatgcttcatcaactttttgcttgaatgaacttgt |
253 |
Q |
| |
|
||||| | ||||||| |||||||| || ||||| ||||| |||| ||||||||| |
|
|
| T |
5984120 |
cattgctattttctcccctaactatgcatcttcaacgttttgtttgactgaacttgt |
5984064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 253
Target Start/End: Complemental strand, 5906376 - 5906240
Alignment:
| Q |
117 |
ttcattgatgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacattgttgttttctctagca |
216 |
Q |
| |
|
|||||||| || |||||||| ||||| ||||||||||| ||||| | |||||| |||| ||| || |||||||||| | ||||| | |||| || | |
|
|
| T |
5906376 |
ttcattgacgatgaagaaatacaaaaaggagaagaaataacacccactcttcttaaagccattaaagaatctaggattttcattgctattttgtccccta |
5906277 |
T |
 |
| Q |
217 |
actatgcttcatcaactttttgcttgaatgaacttgt |
253 |
Q |
| |
|
||||||| || ||||||||||| |||| ||||||||| |
|
|
| T |
5906276 |
actatgcatcttcaactttttgtttgactgaacttgt |
5906240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 5322325 - 5322294
Alignment:
| Q |
18 |
tgtacttatgatgttttcctcagttttagagg |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
5322325 |
tgtacttatgatgttttcctcagttttagagg |
5322294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 271
Target Start/End: Complemental strand, 4208872 - 4208622
Alignment:
| Q |
21 |
acttatgatgttttcctcagttttagaggcacagatacccgcaacactttcaccggtagccttttcaattctcttgatcaaaaaggtattcatacgttca |
120 |
Q |
| |
|
||||||||||| || || || || ||||||| |||||||| |||| ||||| |||| || | ||||||||| |||||| |||||| | || ||| |
|
|
| T |
4208872 |
acttatgatgtctttcttagcttcagaggcattgatacccgaaacaacttcactggtaatctctacaattctctcaatcaaagaggtataaaaactttct |
4208773 |
T |
 |
| Q |
121 |
ttgatgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacattgttgttttctctagcaacta |
220 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||| |||| | ||||||||||| || || |||||||||| | ||||| |||||| || | ||||| |
|
|
| T |
4208772 |
ttgatgaacaagaaattcaaaaaggagaagaaataacacatactcttcttcaagccatcaaataatctaggattttcattgctgttttttccactaacta |
4208673 |
T |
 |
| Q |
221 |
tgcttcatcaactttttgcttgaatgaacttgtcatgatccttgactgttc |
271 |
Q |
| |
|
||| || ||||||||||| |||| ||||||||| | |||||||| ||||| |
|
|
| T |
4208672 |
tgcatcttcaactttttgtttgactgaacttgttaccatccttgagtgttc |
4208622 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 268
Target Start/End: Original strand, 31903836 - 31903984
Alignment:
| Q |
120 |
attgatgaagaagaaattcaaaagggagaagaaatcacaccatcacttcttcaagcaattcaacaatctaggatctacattgttgttttctctagcaact |
219 |
Q |
| |
|
||||| || |||||| |||||| ||| | |||||||||||||||||| | | |||||| || | |||||||| |||| |||| |||||| |||| |
|
|
| T |
31903836 |
attgacgatgaagaacttcaaagaggacatgaaatcacaccatcacttttagaggcaattgaagagtctaggattgccattattgtgctctctaaaaact |
31903935 |
T |
 |
| Q |
220 |
atgcttcatcaactttttgcttgaatgaacttgtcatgatccttgactg |
268 |
Q |
| |
|
||||||| || | |||||||| |||||||||||| |||||||||||| |
|
|
| T |
31903936 |
atgcttcttcttcattttgcttacatgaacttgtcaagatccttgactg |
31903984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 29467800 - 29467858
Alignment:
| Q |
108 |
attcatacgttcattgatgaagaagaaattcaaaagggagaagaaatcacaccatcact |
166 |
Q |
| |
|
||||| || ||||| ||||| |||||| ||||||| || |||||||||||||||||||| |
|
|
| T |
29467800 |
attcacaccttcatggatgatgaagaacttcaaaaaggcgaagaaatcacaccatcact |
29467858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 29761244 - 29761207
Alignment:
| Q |
147 |
gaagaaatcacaccatcacttcttcaagcaattcaaca |
184 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
29761244 |
gaagaaatcacaccatcacttcttaaagcaattgaaca |
29761207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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