View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14836_low_21 (Length: 297)
Name: NF14836_low_21
Description: NF14836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14836_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 6 - 282
Target Start/End: Complemental strand, 14760802 - 14760527
Alignment:
| Q |
6 |
atgttatatacacatttcagaagaattaagttaaagcaggtattagaatcctctggcttctcttcaatgtagtactagtaggcttcatatcgtaagtttg |
105 |
Q |
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| T |
14760802 |
atgttatatacacatttcagaagaattaagttaaagcaggtattagaatcctctggcttctcttcaatgtagtactagtaggcttcatatcgtaagtttg |
14760703 |
T |
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| Q |
106 |
tctgctcatcttggatttttgaactataacaatcatgccaaaatgtttgcatgttgtaattaggattttacatctagcaaccagtatagagagtagcata |
205 |
Q |
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| T |
14760702 |
tctgctcatcttggatttttgaactataataatcatgccaaaatgtttgcatgttgtaattaggattttacatctaccaaccagtat--agagtagcata |
14760605 |
T |
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| Q |
206 |
aaaattgtttatggtacatgacttagcgatattgcctgaata-gggnnnnnnngaattcaaaaggagtgggtattaat |
282 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||| |
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| T |
14760604 |
aaaattgtttatggtacatgacttagagatattgcctgaataggggaaaaaaagaattcaaaaggagtgggtattaat |
14760527 |
T |
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