View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14836_low_23 (Length: 274)
Name: NF14836_low_23
Description: NF14836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14836_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 23077061 - 23076819
Alignment:
| Q |
1 |
tttggattgggatttctctatttttcaagtgaaatagatagttcaatttgaagagagagaaatagttcaattttaagatagtttttgtactaataaaatt |
100 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
23077061 |
tttggattaggatttctctatttttcaagtgaaatagatagttcaatttgaagagagagaaatagttcaatttgaagatagtttttgtactaataaaatt |
23076962 |
T |
|
| Q |
101 |
gtttaaaatgtaagcaaatggtagacaaaaattatatcttacaatatatctttaatatttataccatcgtcttcaaattgggaaaagtattaaggaagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
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| T |
23076961 |
gtttaaaatgtaagcaaatggtagacaaaaattaaatcttacaatatatctttaatatttataccatcgtcttcaaattgggaaaagtattaggcaagtt |
23076862 |
T |
|
| Q |
201 |
acatggtagttgtgttagttaaagcaggacaattttaacttag |
243 |
Q |
| |
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||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
23076861 |
acatggtagttgtgttagttagagcaggacaattttaacttag |
23076819 |
T |
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