View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14838_low_6 (Length: 325)
Name: NF14838_low_6
Description: NF14838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14838_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 45704889 - 45704594
Alignment:
| Q |
20 |
atatcttccagttccaatcctgaaatccttaaaacagcatctgaatccacctctgttacctcaataccacagttactcaatgcttcgataacattctctt |
119 |
Q |
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| T |
45704889 |
atatcttccagttccaatcctgaaatccttaaaacagcatctgaatccacctctgttacctcaataccacagttactcaatgcttcgatgacattctctt |
45704790 |
T |
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| Q |
120 |
tcaagtctggcacaaacatgtgaaataatgagccaacatatgcacacatttggtgtgcatcgtcgcattccaacaatcttatataagcagctctaaatga |
219 |
Q |
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| T |
45704789 |
tcaagtctggcacaaacatgtgaaataatgagccaacatatgcacacatttggtgtgcgtcgtcacattccaacaatcttatataagcagctctaaatga |
45704690 |
T |
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| Q |
220 |
taatgacctaggatctctaagacttgatgtaaaaaacaagcagcttcttttaaaaccttgatccctaaaatacgatttactctttttcgctctctg |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
45704689 |
taatgacctaggatctctaagacttgatgtaaaaaacaagcagcttcttttaaaaccttgatccctaaaatatgatttactctttttcgctctctg |
45704594 |
T |
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