View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14838_low_9 (Length: 231)
Name: NF14838_low_9
Description: NF14838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14838_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 42456252 - 42456053
Alignment:
| Q |
19 |
ctagcaatgagttggtcgtatctaaatctacttctactcctcatgaccctatttaagacctccttccatccaagcaatacacacttcacttcaataatta |
118 |
Q |
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| T |
42456252 |
ctagcaatgagttggtcgtatctaaatctacttctactcctcatgaccctatttaagacctccttccatccaagcaatacacacttcacttcaataatta |
42456153 |
T |
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| Q |
119 |
acctttacacatatccttaacattatatctatttcaaacactatagctagcaaccaaaatgtccataattaatgtaatctcaaagtttatgcttcttctc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42456152 |
acctttacacatatccttaacattatatctatttcaaacactatagctagcaaccaaaatgtccataattaatgtaatctcaaagtttatgcttcttctc |
42456053 |
T |
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