View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14839_high_3 (Length: 237)
Name: NF14839_high_3
Description: NF14839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14839_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 44695258 - 44695484
Alignment:
| Q |
11 |
catcatcatggcaaaatggaaaaatgtaatgttgatatgatggatcgatcagccatgcatgctaacttgcaccacttactttactcttatgtattccttt |
110 |
Q |
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| T |
44695258 |
catcatcatggcaaaatggaaaaatgtaatgttgatatgatggatcgatcagccatgcatgctaacttgcaccacttactttactcttatgtattccttt |
44695357 |
T |
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| Q |
111 |
gatatttgaggcaaagtttcaccattcctgccgtacaaaacattaattaat--ttcctcaaagactccaaaaagatttgagatcaatgtatttaaaaggt |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44695358 |
gatatttgaggcaaagtttcaccattcctgccgtacaaaacattaattaataattcctcaaagactccaaaaagatttgagatcaatgtatttaaaaggt |
44695457 |
T |
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| Q |
209 |
gaaatcaaaacaaagaaaaagtgtcct |
235 |
Q |
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||||||||||||||||||||||||||| |
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| T |
44695458 |
gaaatcaaaacaaagaaaaagtgtcct |
44695484 |
T |
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