View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1483_low_13 (Length: 224)
Name: NF1483_low_13
Description: NF1483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1483_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 46731984 - 46731793
Alignment:
| Q |
14 |
agcagcacagaacagcacggcacggcagagggtcagatttgttttggagtgcacaaagataacaacctctgccagtagaagtgatatatgacaatcaaag |
113 |
Q |
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| T |
46731984 |
agcagaacagaacagcacggcacggcagagggtcagatttgttttggagtgcacaaagataacaacctctgccagtagaagtgatatatgacaatcaaag |
46731885 |
T |
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| Q |
114 |
acataaggcaaaatatccgtaccttttttggttctattatcattcagtatgcacattgcacagataatatagacaaaatattacaactatttgatgatgt |
213 |
Q |
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| T |
46731884 |
acataaggcaaaatatccgtaccttttttggttctattatcattcagtatg-------cacagataatatagacaaaatattacaacta-ttgatgatgt |
46731793 |
T |
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