View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1483_low_15 (Length: 208)
Name: NF1483_low_15
Description: NF1483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1483_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 32651574 - 32651419
Alignment:
| Q |
19 |
cgcttggcatctcttaccttaatctcagnnnnnnnatttggagtaaaccttaaacttcgtttgtgagcttagcttctcctaggtttaattattttttatc |
118 |
Q |
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| T |
32651574 |
cgcttgtcatctcttaccttaatctcagtttttttatatggagtaaaccttaaacttcgtttgtaagcttagcttctcttaggtttaattattttttatc |
32651475 |
T |
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| Q |
119 |
attgtttcaaccagctagcagtttacttacattattagtaactgcgccatttatct |
174 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32651474 |
attgtttcaaccagctagcagtttacttacattattagtaactgcgccatttatct |
32651419 |
T |
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