View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1484-Insertion-2 (Length: 696)

Name: NF1484-Insertion-2
Description: NF1484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1484-Insertion-2
NF1484-Insertion-2
[»] chr7 (103 HSPs)
chr7 (8-696)||(27935590-27936290)
chr7 (133-422)||(1741944-1742232)
chr7 (140-422)||(37815683-37815965)
chr7 (186-422)||(27947411-27947647)
chr7 (142-422)||(22297959-22298242)
chr7 (138-419)||(45948543-45948825)
chr7 (179-411)||(42879855-42880087)
chr7 (187-422)||(44453141-44453374)
chr7 (179-422)||(23935420-23935662)
chr7 (179-415)||(35777817-35778053)
chr7 (179-422)||(13405037-13405280)
chr7 (179-405)||(24680126-24680352)
chr7 (184-422)||(48684726-48684964)
chr7 (179-415)||(31418430-31418666)
chr7 (187-422)||(29530845-29531080)
chr7 (233-422)||(23155372-23155560)
chr7 (179-422)||(45933499-45933737)
chr7 (179-374)||(36807933-36808127)
chr7 (142-337)||(40339420-40339614)
chr7 (142-374)||(41137690-41137921)
chr7 (186-337)||(10476141-10476291)
chr7 (179-333)||(1031153-1031306)
chr7 (282-424)||(10599464-10599606)
chr7 (179-332)||(48843550-48843703)
chr7 (179-337)||(24133124-24133283)
chr7 (183-337)||(21752107-21752260)
chr7 (297-422)||(7795153-7795278)
chr7 (185-337)||(28289219-28289370)
chr7 (179-337)||(8293064-8293220)
chr7 (179-322)||(19105012-19105154)
chr7 (179-337)||(33939729-33939887)
chr7 (186-337)||(40753425-40753574)
chr7 (184-337)||(29636222-29636375)
chr7 (179-337)||(37490782-37490943)
chr7 (143-337)||(45499820-45500016)
chr7 (186-337)||(6563414-6563560)
chr7 (179-337)||(21819282-21819438)
chr7 (180-283)||(10599212-10599315)
chr7 (186-307)||(30312463-30312583)
chr7 (335-424)||(6521973-6522062)
chr7 (142-242)||(715953-716052)
chr7 (142-293)||(8603935-8604086)
chr7 (146-242)||(12977776-12977872)
chr7 (331-422)||(32345746-32345837)
chr7 (179-243)||(18292333-18292397)
chr7 (331-415)||(39117407-39117491)
chr7 (179-322)||(42753706-42753845)
chr7 (179-242)||(34274792-34274855)
chr7 (331-422)||(36446981-36447072)
chr7 (183-288)||(18270579-18270684)
chr7 (284-337)||(34012559-34012612)
chr7 (135-314)||(4268565-4268744)
chr7 (183-239)||(37502321-37502377)
chr7 (181-229)||(40927163-40927211)
chr7 (142-277)||(34012124-34012256)
chr7 (142-231)||(2296999-2297088)
chr7 (193-242)||(25440884-25440933)
chr7 (179-256)||(42285906-42285983)
chr7 (280-337)||(47461370-47461427)
chr7 (179-239)||(24780399-24780459)
chr7 (269-337)||(25055869-25055937)
chr7 (187-337)||(31196575-31196723)
chr7 (179-243)||(44567130-44567194)
chr7 (266-332)||(7759344-7759410)
chr7 (179-228)||(6747225-6747274)
chr7 (135-239)||(8334365-8334469)
chr7 (142-239)||(39557284-39557380)
chr7 (331-422)||(19906564-19906655)
chr7 (331-422)||(26963631-26963722)
chr7 (310-420)||(8334206-8334316)
chr7 (214-300)||(16564799-16564885)
chr7 (214-300)||(16600777-16600863)
chr7 (385-423)||(18733407-18733445)
chr7 (334-415)||(16564720-16564801)
chr7 (334-415)||(16600861-16600942)
chr7 (274-337)||(7335372-7335436)
chr7 (360-427)||(40207294-40207361)
chr7 (279-337)||(47187749-47187807)
chr7 (365-422)||(5723170-5723227)
chr7 (388-425)||(22297949-22297986)
chr7 (365-426)||(40299022-40299083)
chr7 (277-337)||(19303390-19303450)
chr7 (186-242)||(31929950-31930006)
chr7 (146-226)||(32501855-32501935)
chr7 (179-218)||(16565214-16565253)
chr7 (179-218)||(16600409-16600448)
chr7 (385-424)||(40339411-40339450)
chr7 (384-415)||(43813505-43813536)
chr7 (138-169)||(44453340-44453371)
chr7 (385-415)||(716022-716052)
chr7 (388-422)||(30833257-30833291)
chr7 (385-427)||(32345998-32346040)
chr7 (385-422)||(12977846-12977883)
chr7 (385-422)||(18292288-18292325)
chr7 (179-248)||(24424960-24425029)
chr7 (331-412)||(31416672-31416753)
chr7 (389-422)||(31930024-31930057)
chr7 (135-168)||(32097322-32097355)
chr7 (370-423)||(33845336-33845388)
chr7 (385-413)||(18528638-18528666)
chr7 (389-421)||(23935376-23935408)
chr7 (285-337)||(24780314-24780366)
chr7 (388-424)||(37502272-37502308)
[»] chr4 (101 HSPs)
chr4 (145-425)||(52957703-52957983)
chr4 (183-422)||(2728314-2728553)
chr4 (145-422)||(52847970-52848247)
chr4 (179-415)||(1819560-1819796)
chr4 (179-422)||(40345263-40345506)
chr4 (179-422)||(19878646-19878889)
chr4 (179-400)||(20448037-20448258)
chr4 (144-422)||(27653639-27653915)
chr4 (179-421)||(49080394-49080635)
chr4 (179-422)||(37654408-37654651)
chr4 (179-422)||(29519441-29519684)
chr4 (179-422)||(53814413-53814656)
chr4 (142-412)||(45043514-45043784)
chr4 (179-415)||(24940877-24941114)
chr4 (179-422)||(2493100-2493343)
chr4 (142-422)||(41920225-41920505)
chr4 (142-411)||(44571792-44572063)
chr4 (142-422)||(54042098-54042379)
chr4 (179-415)||(38991686-38991923)
chr4 (186-425)||(56373488-56373729)
chr4 (144-417)||(19930677-19930949)
chr4 (179-424)||(49089462-49089706)
chr4 (186-424)||(18429995-18430232)
chr4 (142-415)||(34316183-34316454)
chr4 (142-362)||(52253806-52254029)
chr4 (179-407)||(28734596-28734824)
chr4 (179-422)||(50623081-50623325)
chr4 (186-362)||(29370608-29370784)
chr4 (225-415)||(42605616-42605806)
chr4 (179-337)||(10573156-10573313)
chr4 (256-422)||(39984892-39985058)
chr4 (179-419)||(40010791-40011033)
chr4 (179-337)||(19451206-19451370)
chr4 (142-337)||(50203039-50203229)
chr4 (179-337)||(30261257-30261414)
chr4 (179-337)||(47817736-47817894)
chr4 (187-337)||(45839643-45839793)
chr4 (145-337)||(41496169-41496360)
chr4 (134-338)||(46392063-46392264)
chr4 (179-337)||(8971040-8971198)
chr4 (179-362)||(40837128-40837311)
chr4 (143-337)||(11364188-11364381)
chr4 (179-337)||(34413548-34413706)
chr4 (142-242)||(4505298-4505398)
chr4 (186-333)||(6991268-6991413)
chr4 (179-256)||(37624554-37624631)
chr4 (186-337)||(52162111-52162259)
chr4 (179-243)||(52915637-52915701)
chr4 (146-288)||(25231140-25231281)
chr4 (184-242)||(39982106-39982164)
chr4 (235-337)||(30780021-30780123)
chr4 (180-337)||(56460082-56460241)
chr4 (331-415)||(34124443-34124527)
chr4 (186-337)||(44868253-44868397)
chr4 (186-337)||(620177-620330)
chr4 (331-422)||(19282323-19282414)
chr4 (331-422)||(47321293-47321384)
chr4 (186-256)||(21864465-21864535)
chr4 (186-256)||(21920326-21920396)
chr4 (182-242)||(7906092-7906152)
chr4 (331-422)||(24259759-24259850)
chr4 (179-256)||(24157183-24157260)
chr4 (331-424)||(28116393-28116486)
chr4 (145-242)||(44060972-44061069)
chr4 (332-422)||(31941707-31941794)
chr4 (179-231)||(51733601-51733653)
chr4 (179-242)||(22220455-22220518)
chr4 (179-289)||(31917954-31918065)
chr4 (192-305)||(25123760-25123872)
chr4 (179-259)||(27943624-27943705)
chr4 (331-415)||(17499637-17499721)
chr4 (331-422)||(45889711-45889802)
chr4 (331-422)||(55126645-55126736)
chr4 (331-425)||(54233964-54234058)
chr4 (360-425)||(51737234-51737299)
chr4 (179-223)||(33033076-33033120)
chr4 (262-337)||(44061073-44061149)
chr4 (179-337)||(47458388-47458544)
chr4 (184-231)||(50621294-50621341)
chr4 (332-415)||(51434177-51434260)
chr4 (360-422)||(56556194-56556256)
chr4 (385-422)||(22212541-22212578)
chr4 (388-425)||(50203029-50203066)
chr4 (331-413)||(4408099-4408181)
chr4 (204-242)||(38510341-38510379)
chr4 (135-169)||(39982056-39982090)
chr4 (388-425)||(4505288-4505325)
chr4 (284-337)||(19903204-19903257)
chr4 (385-422)||(28116196-28116233)
chr4 (331-424)||(29840201-29840294)
chr4 (331-420)||(34534008-34534097)
chr4 (389-422)||(37624753-37624786)
chr4 (389-422)||(38510172-38510205)
chr4 (385-422)||(52915708-52915745)
chr4 (334-422)||(6462165-6462253)
chr4 (390-422)||(19282581-19282613)
chr4 (390-422)||(42672023-42672055)
chr4 (390-422)||(45043759-45043791)
chr4 (390-426)||(51434426-51434462)
chr4 (135-167)||(54092154-54092186)
chr4 (388-424)||(56556421-56556457)
[»] chr2 (107 HSPs)
chr2 (138-422)||(12342050-12342334)
chr2 (135-422)||(25383397-25383682)
chr2 (142-425)||(4132985-4133266)
chr2 (179-422)||(441143-441386)
chr2 (179-422)||(29396592-29396835)
chr2 (179-422)||(29808810-29809054)
chr2 (181-422)||(30855105-30855346)
chr2 (179-407)||(38926604-38926832)
chr2 (142-422)||(16807429-16807708)
chr2 (142-422)||(16846710-16846989)
chr2 (179-422)||(13561992-13562234)
chr2 (142-415)||(32227930-32228202)
chr2 (142-362)||(6220376-6220596)
chr2 (182-338)||(45081896-45082052)
chr2 (179-422)||(8774054-8774293)
chr2 (142-422)||(12393831-12394113)
chr2 (179-422)||(8789342-8789581)
chr2 (192-415)||(42753756-42753981)
chr2 (233-422)||(42743081-42743267)
chr2 (186-419)||(42004896-42005128)
chr2 (179-339)||(4288706-4288866)
chr2 (187-337)||(18719430-18719579)
chr2 (179-415)||(36106322-36106554)
chr2 (179-337)||(37038767-37038921)
chr2 (196-338)||(1423206-1423348)
chr2 (179-337)||(12565978-12566135)
chr2 (179-317)||(18579165-18579302)
chr2 (179-337)||(8540036-8540194)
chr2 (261-367)||(19636588-19636694)
chr2 (261-367)||(19835181-19835287)
chr2 (251-368)||(34546114-34546232)
chr2 (182-337)||(19164358-19164509)
chr2 (186-337)||(40608603-40608751)
chr2 (179-337)||(4658229-4658388)
chr2 (179-337)||(43971502-43971644)
chr2 (179-334)||(43480870-43481026)
chr2 (179-302)||(7028845-7028967)
chr2 (179-242)||(43427379-43427442)
chr2 (142-243)||(16792446-16792545)
chr2 (144-256)||(36177939-36178051)
chr2 (179-337)||(36685739-36685895)
chr2 (331-423)||(43388568-43388660)
chr2 (266-337)||(10195759-10195830)
chr2 (331-422)||(25332721-25332812)
chr2 (179-242)||(45301763-45301826)
chr2 (266-415)||(18717161-18717310)
chr2 (179-312)||(29411694-29411826)
chr2 (179-334)||(11132548-11132703)
chr2 (142-242)||(22620426-22620526)
chr2 (180-256)||(27964448-27964524)
chr2 (266-337)||(7872774-7872845)
chr2 (266-337)||(33055975-33056046)
chr2 (179-288)||(35799201-35799308)
chr2 (179-242)||(4051795-4051859)
chr2 (179-259)||(4469499-4469579)
chr2 (179-255)||(34546410-34546486)
chr2 (179-302)||(7042219-7042341)
chr2 (331-422)||(14698139-14698230)
chr2 (179-337)||(15083162-15083307)
chr2 (179-242)||(17695917-17695980)
chr2 (179-334)||(33482230-33482384)
chr2 (180-242)||(5717512-5717574)
chr2 (186-256)||(16463110-16463180)
chr2 (268-337)||(27726417-27726484)
chr2 (182-259)||(9391633-9391710)
chr2 (138-243)||(11188583-11188686)
chr2 (331-411)||(775807-775887)
chr2 (182-242)||(14285939-14285999)
chr2 (277-337)||(27964222-27964282)
chr2 (279-337)||(11188247-11188305)
chr2 (179-231)||(17703017-17703069)
chr2 (388-427)||(5717463-5717502)
chr2 (186-257)||(7644651-7644722)
chr2 (179-229)||(28072565-28072615)
chr2 (142-228)||(32254554-32254639)
chr2 (138-256)||(7874722-7874838)
chr2 (271-329)||(19469613-19469673)
chr2 (326-423)||(33093513-33093610)
chr2 (179-228)||(35046516-35046565)
chr2 (331-415)||(4566040-4566124)
chr2 (179-231)||(14833838-14833890)
chr2 (181-237)||(45423618-45423674)
chr2 (388-422)||(16792439-16792473)
chr2 (365-411)||(36360298-36360344)
chr2 (135-168)||(4051677-4051710)
chr2 (179-242)||(10195572-10195635)
chr2 (131-170)||(40987419-40987458)
chr2 (179-229)||(777768-777818)
chr2 (392-422)||(983735-983765)
chr2 (364-422)||(7743583-7743641)
chr2 (360-422)||(24775367-24775429)
chr2 (283-333)||(27726542-27726592)
chr2 (179-229)||(27986034-27986083)
chr2 (388-422)||(32228175-32228209)
chr2 (388-422)||(37724201-37724235)
chr2 (331-408)||(39866596-39866674)
chr2 (388-422)||(40987194-40987228)
chr2 (388-422)||(40987420-40987454)
chr2 (388-421)||(776048-776081)
chr2 (385-422)||(29795351-29795388)
chr2 (283-336)||(34455793-34455846)
chr2 (385-422)||(44228670-44228707)
chr2 (389-422)||(45081818-45081851)
chr2 (388-424)||(1422101-1422137)
chr2 (390-422)||(7028977-7029009)
chr2 (385-417)||(34225953-34225985)
chr2 (196-228)||(35046614-35046646)
[»] scaffold0110 (1 HSPs)
scaffold0110 (142-425)||(24649-24932)
[»] chr5 (79 HSPs)
chr5 (179-422)||(42103975-42104218)
chr5 (146-422)||(39566148-39566424)
chr5 (142-422)||(2729698-2729978)
chr5 (142-422)||(14620405-14620686)
chr5 (186-415)||(3305927-3306157)
chr5 (179-422)||(39504720-39504966)
chr5 (179-415)||(6518974-6519211)
chr5 (146-423)||(8336318-8336597)
chr5 (179-422)||(26660753-26660995)
chr5 (179-422)||(26932346-26932588)
chr5 (179-410)||(34445952-34446182)
chr5 (186-422)||(42661852-42662087)
chr5 (182-422)||(39729960-39730187)
chr5 (200-407)||(14005911-14006118)
chr5 (217-424)||(39335113-39335321)
chr5 (138-415)||(21375569-21375846)
chr5 (183-336)||(11977590-11977742)
chr5 (186-422)||(29807226-29807465)
chr5 (179-339)||(21319307-21319465)
chr5 (142-411)||(42977996-42978257)
chr5 (271-422)||(34972562-34972713)
chr5 (199-422)||(27600417-27600635)
chr5 (179-374)||(4424975-4425167)
chr5 (186-337)||(27797786-27797933)
chr5 (145-337)||(36164853-36165042)
chr5 (180-337)||(15167009-15167164)
chr5 (186-337)||(34534365-34534514)
chr5 (142-337)||(38369834-38370027)
chr5 (179-292)||(13761555-13761668)
chr5 (179-337)||(843019-843173)
chr5 (142-242)||(7316989-7317089)
chr5 (179-301)||(34208926-34209052)
chr5 (179-337)||(7721094-7721250)
chr5 (180-337)||(38362135-38362291)
chr5 (179-242)||(10345024-10345087)
chr5 (142-242)||(3025023-3025123)
chr5 (266-337)||(4911112-4911184)
chr5 (179-258)||(7579945-7580024)
chr5 (179-242)||(24280991-24281054)
chr5 (179-242)||(24381158-24381221)
chr5 (186-337)||(14161898-14162049)
chr5 (266-337)||(7736458-7736529)
chr5 (186-337)||(13974282-13974429)
chr5 (183-242)||(35765992-35766051)
chr5 (284-415)||(13761823-13761952)
chr5 (179-239)||(25362895-25362955)
chr5 (179-259)||(36073705-36073785)
chr5 (186-288)||(4630870-4630971)
chr5 (331-422)||(27652231-27652322)
chr5 (211-337)||(1309356-1309481)
chr5 (182-256)||(21195380-21195454)
chr5 (285-330)||(7579598-7579643)
chr5 (269-334)||(7748898-7748963)
chr5 (331-416)||(42329462-42329547)
chr5 (179-259)||(4911225-4911305)
chr5 (280-320)||(28591641-28591681)
chr5 (179-242)||(9066515-9066578)
chr5 (266-337)||(21634196-21634266)
chr5 (266-337)||(21642443-21642513)
chr5 (331-407)||(793531-793607)
chr5 (331-411)||(4833559-4833639)
chr5 (358-422)||(7145025-7145089)
chr5 (331-422)||(29653424-29653515)
chr5 (186-224)||(31041932-31041970)
chr5 (179-229)||(43584482-43584532)
chr5 (179-216)||(39804166-39804203)
chr5 (331-415)||(36296051-36296135)
chr5 (388-422)||(15566452-15566486)
chr5 (275-337)||(41645330-41645391)
chr5 (135-168)||(6519185-6519218)
chr5 (385-422)||(10345095-10345132)
chr5 (389-422)||(27658737-27658770)
chr5 (385-422)||(29044700-29044737)
chr5 (389-422)||(32963171-32963204)
chr5 (389-422)||(36296297-36296330)
chr5 (387-424)||(39566135-39566172)
chr5 (389-425)||(4742433-4742469)
chr5 (390-422)||(7144792-7144824)
chr5 (385-421)||(14620656-14620692)
[»] chr1 (113 HSPs)
chr1 (179-422)||(5463573-5463816)
chr1 (142-415)||(32806855-32807128)
chr1 (138-422)||(10842738-10843021)
chr1 (179-422)||(49468621-49468864)
chr1 (179-422)||(35847846-35848086)
chr1 (142-413)||(15822995-15823266)
chr1 (142-415)||(31491687-31491960)
chr1 (142-423)||(48025163-48025444)
chr1 (184-410)||(50094232-50094459)
chr1 (179-422)||(9915441-9915685)
chr1 (179-422)||(44108597-44108842)
chr1 (179-413)||(15573605-15573845)
chr1 (179-422)||(52125046-52125289)
chr1 (179-415)||(1740557-1740794)
chr1 (183-362)||(24611489-24611669)
chr1 (143-422)||(46045936-46046214)
chr1 (179-358)||(31798587-31798767)
chr1 (142-337)||(29567857-29568051)
chr1 (179-415)||(48009008-48009244)
chr1 (138-337)||(27208947-27209144)
chr1 (187-422)||(25151821-25152051)
chr1 (189-425)||(34110535-34110771)
chr1 (180-422)||(49426329-49426565)
chr1 (196-377)||(43759347-43759528)
chr1 (186-407)||(46286743-46286964)
chr1 (142-300)||(26755181-26755338)
chr1 (180-337)||(26595065-26595221)
chr1 (200-362)||(52066260-52066420)
chr1 (142-424)||(43358122-43358391)
chr1 (179-337)||(25560868-25561026)
chr1 (179-337)||(18794538-18794694)
chr1 (277-411)||(38530760-38530894)
chr1 (179-337)||(16757194-16757347)
chr1 (142-302)||(46554761-46554918)
chr1 (145-242)||(50249274-50249371)
chr1 (144-288)||(13408309-13408453)
chr1 (216-337)||(31699285-31699405)
chr1 (142-242)||(34047325-34047426)
chr1 (142-337)||(2610828-2611019)
chr1 (186-337)||(8895011-8895161)
chr1 (179-242)||(34032170-34032233)
chr1 (180-337)||(49900752-49900910)
chr1 (331-422)||(50591230-50591321)
chr1 (180-362)||(7214009-7214185)
chr1 (186-302)||(33622395-33622511)
chr1 (179-242)||(12591172-12591235)
chr1 (179-242)||(26352171-26352234)
chr1 (331-422)||(28200134-28200225)
chr1 (179-242)||(44258597-44258660)
chr1 (179-280)||(38531349-38531450)
chr1 (135-239)||(14373506-14373610)
chr1 (186-242)||(25487093-25487149)
chr1 (331-422)||(2459155-2459246)
chr1 (266-337)||(5225821-5225892)
chr1 (187-242)||(14593410-14593465)
chr1 (179-242)||(24483386-24483449)
chr1 (179-242)||(44557134-44557197)
chr1 (331-422)||(49894931-49895022)
chr1 (180-258)||(49402945-49403023)
chr1 (331-424)||(22665086-22665179)
chr1 (183-256)||(40717372-40717445)
chr1 (331-415)||(5854143-5854227)
chr1 (142-290)||(39477751-39477897)
chr1 (266-337)||(5063-5134)
chr1 (179-337)||(7191202-7191360)
chr1 (274-337)||(8989635-8989698)
chr1 (320-422)||(11134372-11134474)
chr1 (331-413)||(44582699-44582781)
chr1 (179-288)||(12484673-12484781)
chr1 (142-227)||(30292901-30292986)
chr1 (269-337)||(46271018-46271087)
chr1 (186-242)||(27720963-27721019)
chr1 (266-321)||(9092677-9092731)
chr1 (179-242)||(52024324-52024387)
chr1 (186-256)||(24884420-24884490)
chr1 (284-337)||(28538307-28538360)
chr1 (181-238)||(46271411-46271468)
chr1 (180-337)||(51244831-51244988)
chr1 (179-222)||(38947653-38947696)
chr1 (357-423)||(13408245-13408311)
chr1 (331-424)||(84428-84521)
chr1 (385-422)||(12851935-12851972)
chr1 (385-422)||(27720913-27720950)
chr1 (360-425)||(43755205-43755270)
chr1 (331-424)||(50349767-50349860)
chr1 (331-407)||(672209-672285)
chr1 (331-422)||(9552269-9552358)
chr1 (331-407)||(42650176-42650252)
chr1 (390-422)||(45749411-45749443)
chr1 (331-425)||(254821-254914)
chr1 (282-337)||(38947695-38947749)
chr1 (180-231)||(39125647-39125698)
chr1 (327-422)||(40717272-40717367)
chr1 (388-422)||(255078-255112)
chr1 (388-422)||(2610992-2611026)
chr1 (385-415)||(6377205-6377235)
chr1 (388-422)||(17919985-17920019)
chr1 (138-168)||(34032004-34032034)
chr1 (388-422)||(34047399-34047433)
chr1 (179-213)||(43929683-43929717)
chr1 (388-422)||(44024499-44024533)
chr1 (388-422)||(50094181-50094215)
chr1 (135-168)||(5317489-5317522)
chr1 (385-422)||(24040936-24040973)
chr1 (389-422)||(26352002-26352035)
chr1 (135-168)||(34047154-34047187)
chr1 (389-422)||(44557207-44557240)
chr1 (385-422)||(49894760-49894797)
chr1 (385-422)||(50249264-50249301)
chr1 (385-421)||(672428-672464)
chr1 (365-425)||(11066206-11066266)
chr1 (142-170)||(12002207-12002235)
chr1 (331-415)||(26252269-26252353)
[»] chr8 (72 HSPs)
chr8 (142-424)||(39463220-39463500)
chr8 (142-407)||(4989440-4989704)
chr8 (179-422)||(40228572-40228815)
chr8 (187-424)||(31899158-31899395)
chr8 (142-422)||(4760471-4760749)
chr8 (179-422)||(43448714-43448957)
chr8 (142-415)||(17920917-17921191)
chr8 (142-412)||(39698588-39698857)
chr8 (142-415)||(9304553-9304825)
chr8 (142-415)||(9880420-9880692)
chr8 (186-411)||(43084550-43084775)
chr8 (179-408)||(31693545-31693776)
chr8 (145-362)||(7839422-7839639)
chr8 (146-407)||(29025676-29025934)
chr8 (142-362)||(44713495-44713715)
chr8 (179-337)||(6374412-6374568)
chr8 (179-337)||(9812171-9812328)
chr8 (179-337)||(45358892-45359049)
chr8 (186-337)||(514879-515032)
chr8 (184-337)||(5295403-5295556)
chr8 (142-337)||(14234213-14234409)
chr8 (142-337)||(34796679-34796870)
chr8 (179-306)||(19438234-19438362)
chr8 (179-306)||(19574384-19574512)
chr8 (186-337)||(34156539-34156690)
chr8 (142-337)||(13367946-13368140)
chr8 (145-321)||(29312204-29312381)
chr8 (210-363)||(5790617-5790772)
chr8 (142-242)||(15160538-15160638)
chr8 (279-362)||(36669766-36669849)
chr8 (186-337)||(13496240-13496393)
chr8 (266-337)||(15750327-15750399)
chr8 (266-337)||(40399875-40399946)
chr8 (182-264)||(35356308-35356390)
chr8 (179-236)||(39765957-39766014)
chr8 (268-337)||(43970049-43970118)
chr8 (182-239)||(43974886-43974943)
chr8 (189-335)||(31233939-31234084)
chr8 (142-242)||(37559625-37559725)
chr8 (179-239)||(40362433-40362493)
chr8 (200-337)||(41679338-41679467)
chr8 (179-337)||(15227565-15227725)
chr8 (331-422)||(34168124-34168215)
chr8 (179-242)||(43724379-43724443)
chr8 (331-422)||(27416652-27416743)
chr8 (331-422)||(34461494-34461585)
chr8 (331-417)||(18673016-18673102)
chr8 (142-239)||(6116100-6116197)
chr8 (179-242)||(396305-396369)
chr8 (331-422)||(14541658-14541749)
chr8 (275-337)||(42179188-42179250)
chr8 (267-337)||(43561408-43561478)
chr8 (186-242)||(36921362-36921418)
chr8 (186-242)||(40400068-40400124)
chr8 (331-422)||(8471408-8471499)
chr8 (179-242)||(17655906-17655968)
chr8 (180-242)||(40400441-40400503)
chr8 (365-422)||(8382399-8382456)
chr8 (202-255)||(44342865-44342918)
chr8 (331-423)||(9022545-9022637)
chr8 (388-422)||(14541911-14541945)
chr8 (388-422)||(37559698-37559732)
chr8 (186-228)||(43561344-43561386)
chr8 (385-422)||(1774221-1774258)
chr8 (385-422)||(4530070-4530107)
chr8 (385-422)||(18673260-18673297)
chr8 (179-216)||(22699381-22699418)
chr8 (389-422)||(32326637-32326670)
chr8 (179-216)||(32414725-32414762)
chr8 (365-425)||(8106797-8106857)
chr8 (142-170)||(8382406-8382434)
chr8 (386-422)||(11168888-11168924)
[»] chr3 (98 HSPs)
chr3 (146-422)||(33193940-33194215)
chr3 (142-422)||(51397971-51398251)
chr3 (142-411)||(45213642-45213909)
chr3 (179-415)||(47895260-47895496)
chr3 (182-422)||(30431121-30431360)
chr3 (179-415)||(44676219-44676455)
chr3 (180-422)||(36460805-36461046)
chr3 (142-362)||(38016337-38016555)
chr3 (133-422)||(3152716-3153003)
chr3 (179-422)||(2458005-2458249)
chr3 (179-413)||(11393543-11393777)
chr3 (179-422)||(47137961-47138206)
chr3 (181-415)||(38363785-38364025)
chr3 (179-422)||(41287405-41287651)
chr3 (179-421)||(31853472-31853714)
chr3 (179-422)||(41850388-41850622)
chr3 (179-415)||(23525232-23525468)
chr3 (179-422)||(53200590-53200832)
chr3 (138-415)||(50088232-50088509)
chr3 (179-374)||(30426280-30426476)
chr3 (135-337)||(36844737-36844938)
chr3 (142-422)||(35557662-35557947)
chr3 (186-422)||(33024210-33024445)
chr3 (179-355)||(32492158-32492333)
chr3 (184-315)||(36729826-36729957)
chr3 (261-423)||(39359000-39359162)
chr3 (142-337)||(19373547-19373741)
chr3 (179-337)||(30315307-30315465)
chr3 (210-417)||(45566828-45567032)
chr3 (179-337)||(42071983-42072140)
chr3 (179-337)||(48903284-48903441)
chr3 (180-337)||(38140949-38141105)
chr3 (179-320)||(48901718-48901858)
chr3 (150-337)||(30934804-30934987)
chr3 (142-312)||(4392157-4392326)
chr3 (186-337)||(9189430-9189580)
chr3 (234-422)||(13756786-13756970)
chr3 (182-337)||(40487829-40487983)
chr3 (138-256)||(50646185-50646303)
chr3 (180-329)||(7230897-7231047)
chr3 (298-419)||(36729684-36729805)
chr3 (274-367)||(45518448-45518541)
chr3 (210-422)||(51481964-51482177)
chr3 (180-337)||(8817139-8817296)
chr3 (233-363)||(36381340-36381472)
chr3 (142-242)||(42571618-42571718)
chr3 (142-242)||(50038260-50038360)
chr3 (331-427)||(54933110-54933206)
chr3 (179-302)||(22857088-22857210)
chr3 (280-411)||(45391878-45392008)
chr3 (179-337)||(50346624-50346780)
chr3 (179-239)||(19115385-19115445)
chr3 (331-422)||(54261567-54261658)
chr3 (142-242)||(4758952-4759052)
chr3 (331-423)||(20512405-20512497)
chr3 (207-335)||(27067634-27067759)
chr3 (142-274)||(39356846-39356978)
chr3 (141-242)||(31583523-31583624)
chr3 (179-239)||(42886749-42886809)
chr3 (277-347)||(39168802-39168872)
chr3 (179-231)||(23208391-23208441)
chr3 (331-415)||(2988527-2988611)
chr3 (333-415)||(49470926-49471008)
chr3 (179-256)||(47823526-47823603)
chr3 (142-202)||(37225726-37225786)
chr3 (331-415)||(43687800-43687884)
chr3 (385-425)||(43736780-43736820)
chr3 (179-238)||(11019919-11019978)
chr3 (135-169)||(36729969-36730003)
chr3 (385-423)||(40048848-40048886)
chr3 (187-237)||(52654310-52654360)
chr3 (331-412)||(25722381-25722462)
chr3 (284-337)||(40717665-40717717)
chr3 (385-422)||(51397964-51398001)
chr3 (186-262)||(25363782-25363857)
chr3 (390-422)||(42939923-42939955)
chr3 (331-423)||(51381876-51381968)
chr3 (385-425)||(52222901-52222941)
chr3 (385-424)||(2662638-2662677)
chr3 (385-424)||(25722622-25722661)
chr3 (331-422)||(32303815-32303906)
chr3 (268-337)||(3985937-3986006)
chr3 (389-422)||(4758945-4758978)
chr3 (385-422)||(19115342-19115379)
chr3 (385-422)||(26965660-26965697)
chr3 (389-422)||(30186328-30186361)
chr3 (385-422)||(31290886-31290923)
chr3 (385-422)||(38016330-38016367)
chr3 (365-422)||(38277936-38277993)
chr3 (365-422)||(42791480-42791537)
chr3 (385-422)||(42886704-42886741)
chr3 (389-422)||(43169289-43169322)
chr3 (360-424)||(2567922-2567986)
chr3 (138-170)||(36461011-36461043)
chr3 (388-424)||(37225759-37225795)
chr3 (388-424)||(38363738-38363774)
chr3 (479-543)||(52838403-52838467)
chr3 (331-415)||(53560816-53560900)
[»] scaffold0048 (1 HSPs)
scaffold0048 (179-407)||(62631-62859)
[»] chr6 (56 HSPs)
chr6 (183-413)||(19674982-19675210)
chr6 (179-420)||(23259239-23259480)
chr6 (145-423)||(233998-234267)
chr6 (142-422)||(24163625-24163905)
chr6 (183-422)||(29713318-29713557)
chr6 (215-424)||(1134959-1135168)
chr6 (186-422)||(24555838-24556076)
chr6 (179-339)||(31443440-31443601)
chr6 (179-337)||(9940646-9940803)
chr6 (238-368)||(10540442-10540572)
chr6 (179-338)||(17552243-17552400)
chr6 (180-337)||(13503841-13504002)
chr6 (183-337)||(12459316-12459469)
chr6 (261-422)||(10520302-10520463)
chr6 (179-335)||(18737087-18737245)
chr6 (179-337)||(3988741-3988896)
chr6 (144-315)||(32193665-32193835)
chr6 (140-337)||(577022-577217)
chr6 (183-337)||(12322881-12323035)
chr6 (142-242)||(29399907-29400007)
chr6 (179-286)||(12063558-12063665)
chr6 (179-242)||(4850587-4850650)
chr6 (179-302)||(19600419-19600541)
chr6 (266-337)||(20226218-20226289)
chr6 (266-337)||(22120202-22120273)
chr6 (142-243)||(32429247-32429346)
chr6 (142-242)||(10540601-10540700)
chr6 (198-282)||(34513655-34513739)
chr6 (266-337)||(1502750-1502821)
chr6 (267-337)||(21271400-21271469)
chr6 (275-329)||(32619830-32619884)
chr6 (266-335)||(16128006-16128075)
chr6 (179-302)||(31233655-31233780)
chr6 (279-334)||(8957865-8957920)
chr6 (279-334)||(8961437-8961492)
chr6 (274-337)||(17828375-17828438)
chr6 (145-257)||(10520716-10520827)
chr6 (282-337)||(13011345-13011400)
chr6 (182-242)||(8030643-8030703)
chr6 (179-231)||(21272205-21272257)
chr6 (274-337)||(3847744-3847807)
chr6 (186-229)||(12588531-12588574)
chr6 (210-332)||(17267609-17267731)
chr6 (331-422)||(17345050-17345137)
chr6 (385-422)||(32429240-32429277)
chr6 (208-256)||(19689357-19689405)
chr6 (390-422)||(26669262-26669294)
chr6 (180-239)||(1502834-1502893)
chr6 (249-292)||(17246678-17246721)
chr6 (299-337)||(32193927-32193965)
chr6 (138-168)||(34439323-34439353)
chr6 (388-422)||(34519290-34519324)
chr6 (180-213)||(17246728-17246761)
chr6 (385-422)||(26189462-26189499)
chr6 (388-417)||(28554769-28554798)
chr6 (390-422)||(9940602-9940634)
[»] scaffold0294 (1 HSPs)
scaffold0294 (182-373)||(3465-3656)
[»] scaffold0015 (2 HSPs)
scaffold0015 (186-422)||(20993-21229)
scaffold0015 (390-422)||(21248-21280)
[»] scaffold0565 (2 HSPs)
scaffold0565 (142-346)||(9630-9833)
scaffold0565 (179-337)||(9952-10110)
[»] scaffold0502 (1 HSPs)
scaffold0502 (186-337)||(569-719)
[»] scaffold0983 (1 HSPs)
scaffold0983 (179-337)||(684-841)
[»] scaffold0182 (1 HSPs)
scaffold0182 (183-337)||(18252-18405)
[»] scaffold0078 (2 HSPs)
scaffold0078 (179-300)||(1446-1568)
scaffold0078 (334-411)||(1371-1448)
[»] scaffold0300 (1 HSPs)
scaffold0300 (182-337)||(4566-4720)
[»] scaffold0026 (1 HSPs)
scaffold0026 (186-337)||(4145-4296)
[»] scaffold0332 (2 HSPs)
scaffold0332 (179-242)||(3902-3965)
scaffold0332 (138-168)||(3736-3766)
[»] scaffold2107 (2 HSPs)
scaffold2107 (186-256)||(591-661)
scaffold2107 (300-377)||(341-418)
[»] scaffold0136 (1 HSPs)
scaffold0136 (266-337)||(9628-9700)
[»] scaffold0047 (1 HSPs)
scaffold0047 (331-422)||(70365-70456)
[»] scaffold0758 (1 HSPs)
scaffold0758 (335-424)||(6237-6326)
[»] scaffold0039 (1 HSPs)
scaffold0039 (140-223)||(75410-75492)
[»] scaffold0007 (1 HSPs)
scaffold0007 (365-422)||(158273-158329)
[»] scaffold0119 (1 HSPs)
scaffold0119 (390-422)||(1499-1531)


Alignment Details
Target: chr7 (Bit Score: 528; Significance: 0; HSPs: 103)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 528; E-Value: 0
Query Start/End: Original strand, 8 - 696
Target Start/End: Original strand, 27935590 - 27936290
Alignment:
Q  8 gctaaccctcatagctcttgttatgtctccccttcagttctttctatttgtttcttccattttatcgtttcttaaccatccctaccccgtggattttcta 107  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27935590 gctaaccctcatagctcttgttatgtcttccctttagttctttctatttgtttcttccattttatcgtttcttaaccatccctaccccgtggattttcta 27935689  T
Q  108 gttaattaatattgttgggctcaagtctattcctt---ccgttttaaaatgagtgtcgttttagctnnnnnnnn-ttgtttcaaaatgaatgtcactttc 203  Q
    |||||||||||||||||||||||||| |||| |||   ||||||||||||| |||||||||||| |         |||||| ||||||||||||||||||    
T  27935690 gttaattaatattgttgggctcaagtttattactttatccgttttaaaatgggtgtcgttttagttaaaaaaaaattgttttaaaatgaatgtcactttc 27935789  T
Q  204 agtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaac 303  Q
    ||||| |||||||||||||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27935790 agttttcaatgcaataataactttttatcttcaattgtatcatttaattaatactacgttaaactacttccaaagtattattttttctttaatgaaaaac 27935889  T
Q  304 aaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactca 403  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||||||||||||||||||    
T  27935890 aaatcaatagttaattaagctaatttggtaaaattgttatgacttttgactactttattcaattccttaatctgtgtgcagttggctaaagcgacactca 27935989  T
Q  404 ttttaaaacggatggagtacttgtcaggattaattgtaacttagtcttctcatctaatcaatttatggatttcggtttaaatccgcgattttggtccctt 503  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27935990 ttttgaaacggatggagtacttgttaggattaattgtaacttagtcttctcatctaatcaatttatggatttcggtttaaatccgcgattttggtccctt 27936089  T
Q  504 gttttcttaaattttttaaattgaaaacatcatttaaattaggcataaccttagatgatgtggcacaaaacttcggacacacatggatgccacgttagat 603  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27936090 gttttcttaaatttttttaattgaaaacatcatttaaattaggcataaccttagatgatgtggcacaaaactttggacacacatggatgccacgttagat 27936189  T
Q  604 taaaagagttgtatt-aaaagtggatac------aggaaaaacatcataattcaacatgatgttttgggtggttttcttgta-tatcatgggttgtaaat 695  Q
    ||||||||||||||| ||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27936190 taaaagagttgtattaaaaagtggatacatcaaaaggaaaaacatcataattcaacatgatgttttgggtggttttcttgtattatcatgggttgtaaat 27936289  T
Q  696 t 696  Q
    |    
T  27936290 t 27936290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 133 - 422
Target Start/End: Original strand, 1741944 - 1742232
Alignment:
Q  133 tctattccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctc 232  Q
    |||| ||| ||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  1741944 tctactccctccgtttcaaaatgagtgtcgttttagc-ccaaaaagttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 1742042  T
Q  233 ttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggt 332  Q
    ||||||||||  ||| |||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  1742043 ttcaattgtacccttcaattaatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggt 1742142  T
Q  333 aaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||| |||||| |||||||||||||||| |||| ||||| || || || ||||||||||||||||||||||| ||||||| ||||||    
T  1742143 aaaattgctatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 1742232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 140 - 422
Target Start/End: Original strand, 37815683 - 37815965
Alignment:
Q  140 cttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    ||||||||||||||||||||||||||||           ||||||||||||||||||| |||||| |||||||| ||||||||| ||||||| |||||||    
T  37815683 cttccgttttaaaatgagtgtcgttttaatcaaaaaaaattgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttcttttcaatt 37815782  T
Q  240 gtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattg 339  Q
     ||  ||| |||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37815783 atacccttcaattaatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattg 37815882  T
Q  340 ttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     |||||| |||||||| ||||||| |||||||||| || || || ||||||||| ||||||||||||||||||||| ||||||    
T  37815883 ctatgacatttgactattttattccattctttaatatgtgtgcaattggctaaaacgacactcattttaaaacggagggagta 37815965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 186 - 422
Target Start/End: Complemental strand, 27947647 - 27947411
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||| ||||||||||| | || ||||||||||||| || |||    
T  27947647 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatattatgctacactacttccaaaggatgatt 27947548  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagt 385  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||||||||||| ||||| || || || |    
T  27947547 ttttctttaatgaaaaacaaatcaatagttgattaggataatttagtaaaattgctatgacatttgactactttattcaattcattaatatgtgtgcaat 27947448  T
Q  386 tggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||| ||||| |||||||||||| ||||||||||||||    
T  27947447 tggttaaagtgacactcattttgaaacggatggagta 27947411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 142 - 422
Target Start/End: Original strand, 22297959 - 22298242
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  22297959 tccgttttaaaatgagtgtcgttttagc--aaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaactgt 22298056  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| | |||||| || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |    
T  22298057 acccttcagttaatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgct 22298156  T
Q  342 atgacttttgac-----tactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| ||||||     |||||||||| |||| ||||| || || || ||||||||| ||||||||||||| |||| || ||||||    
T  22298157 atgacatttgactactttactttattccattccttaatctgtgtgcaattggctaaaacgacactcattttgaaacagagggagta 22298242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 138 - 419
Target Start/End: Complemental strand, 45948825 - 45948543
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagctnnnnnnnn-ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttca 236  Q
    ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45948825 tccttccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttca 45948726  T
Q  237 attgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaa 336  Q
    ||||||  ||| |||||||| || |||| | |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||    
T  45948725 attgtacccttcaattaatactatgttacattacttccaaaatattattttttctttaatgaaaaacaaaccaatggttgattacgataatttggtaaaa 45948626  T
Q  337 ttgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatgga 419  Q
    ||| |||||| |||||||||||||||| |||   |||| || ||    ||| ||||| |||||||||||||||||||||||||    
T  45948625 ttgctatgacatttgactactttattctatttcgtaatatgtgtgtgattgactaaaacgacactcattttaaaacggatgga 45948543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 179 - 411
Target Start/End: Complemental strand, 42880087 - 42879855
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||  ||| |||||||| || |||| |||||||||||||    
T  42880087 ttgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 42879988  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
     |||||||||||||||||||||||||||  |||||||||||| | |||||||||||||||| |||||| |||| ||||||||||| |||| ||| | ||     
T  42879987 aattattttttctttaatgaaaaacaaactaatagttgattacgataatttggtaaaattgctatgacatttgcctactttattccattccttactctgt 42879888  T
Q  379 gtccagttggctaaagcgacactcattttaaaa 411  Q
    || || |||||||||||||||||||||||||||    
T  42879887 gtgcaattggctaaagcgacactcattttaaaa 42879855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 187 - 422
Target Start/End: Original strand, 44453141 - 44453374
Alignment:
Q  187 aaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattt 286  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||||||  ||| |||||||| || |||| |||||||| ||||||||||||    
T  44453141 aaatgaatgtcactttcagtttccaatgcaataataactttcttttttcaattgtacccttcaattaatactatgttacactacttctaaagtattattt 44453240  T
Q  287 tttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagtt 386  Q
    |||  ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||  | || ||    
T  44453241 ttt--ttaatgaaaaacaaaccaataggtgattaggataatttggtaaaattgttatgacatttgactactttattccattctttaatctgtatgcaatt 44453338  T
Q  387 ggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||| ||||||||||||||||||||| ||||||    
T  44453339 ggctaaaacgacactcattttaaaacggaaggagta 44453374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 23935420 - 23935662
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||| ||||||  |||||||||||||||||||||||||||||||| |||||| |||  ||| |||||||| || |||| ||||||||| |||    
T  23935420 ttgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttcttttcaat-gtacccttcaattaatactatgttacactacttccgaag 23935518  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
     ||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| |||||||||| ||     
T  23935519 gattattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattctttaatgtgg 23935618  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || |||| |||||||||||||||||||||||||| ||||||    
T  23935619 gtacaattgggtaaagcgacactcattttaaaacggagggagta 23935662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 179 - 415
Target Start/End: Original strand, 35777817 - 35778053
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||| | ||||||||||  ||| ||||| || ||  ||| |||||||||||||    
T  35777817 ttgtttcaaaataaatgtcactttcggtttctaatgcaataataactttttattttcaattgtacccttcaattagtactatattacactacttccaaag 35777916  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||  |||| ||||| ||     
T  35777917 tattattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatatgt 35778016  T
Q  379 gtccagttggctaaagcgacactcattttaaaacgga 415  Q
    || || || |||||||||| |||||||||||||||||    
T  35778017 gtgcaattagctaaagcgatactcattttaaaacgga 35778053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 13405280 - 13405037
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||| |||||||| || |||| ||||||| |||||    
T  13405280 ttgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 13405181  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||| |||||||||||||||  |||  ||||| ||     
T  13405180 tattgttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgacatttgactactttatttcatttcttaatatgt 13405081  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || |||| |||| |||||||||||||||||| || ||||||    
T  13405080 gtgcaattggttaaaacgacactcattttaaaacagaaggagta 13405037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 179 - 405
Target Start/End: Original strand, 24680126 - 24680352
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||||||  || |||  | |||||||||||    
T  24680126 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctttaattaatgctatgttgcattacttccaaag 24680225  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||  |||| ||||| |      
T  24680226 tattattttttctttaatgaaaaacaaatcaatagttgattagaataatttggtaaaattgttatgacatttgactactttatttcattccttaatatat 24680325  T
Q  379 gtccagttggctaaagcgacactcatt 405  Q
    || || || |||||| |||||||||||    
T  24680326 gtgcaattagctaaaacgacactcatt 24680352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 184 - 422
Target Start/End: Original strand, 48684726 - 48684964
Alignment:
Q  184 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatta 283  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||   || |||||||| || |||| || |||| ||||||||||    
T  48684726 tcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacaccactttcaaagtatta 48684825  T
Q  284 ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtcca 383  Q
    ||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||  |||| ||||| || || ||    
T  48684826 ttttttctttaataaaaaacaaatcaatagatgataaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatctgtgtgca 48684925  T
Q  384 gttggctaaagcgacactcattttaaaacggatggagta 422  Q
     |||  ||||||||||||||||||||||| || ||||||    
T  48684926 attgattaaagcgacactcattttaaaactgagggagta 48684964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 179 - 415
Target Start/End: Complemental strand, 31418666 - 31418430
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||| || |||| |||||||||||||    
T  31418666 ttgtttcaaaataaattccactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 31418567  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||||| |||||| |||||||||||||||| |||  ||||| |      
T  31418566 tattattttttctttaattaaaaacaaattaatagttgattaggataatttggtgaaattgctatgacatttgactactttattccatttcttaatatat 31418467  T
Q  379 gtccagttggctaaagcgacactcattttaaaacgga 415  Q
    || || |||  |||||||||||| |||||||||||||    
T  31418466 gtgcaattgattaaagcgacacttattttaaaacgga 31418430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 187 - 422
Target Start/End: Complemental strand, 29531080 - 29530845
Alignment:
Q  187 aaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattt 286  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||  ||| ||||||||||| |||| || |||| |||||||||||||    
T  29531080 aaatgaatgtcattttcagttttcaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacaccactttcaaagtattattt 29530981  T
Q  287 tttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagtt 386  Q
    |||||| ||| ||||||||||||||||||||||||| | |||||||||||||| |||||| |||||||||||||||  |||| ||||| || || || ||    
T  29530980 tttcttcaataaaaaacaaatcaatagttgattaggatgatttggtaaaattgctatgacatttgactactttattttattccttaatctgtgtgcaatt 29530881  T
Q  387 ggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||| ||||||||||||||||||| | ||||||    
T  29530880 ggctaaatcgacactcattttaaaacgaagggagta 29530845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 233 - 422
Target Start/End: Complemental strand, 23155560 - 23155372
Alignment:
Q  233 ttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggt 332  Q
    |||||||||| | || ||||||||||| |||| | |||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  23155560 ttcaattgtagttttcaattaatattatgttacattacttctaaagtattatttttt-tttaatgaaaaacaaaccaatagttgattaggataatttggt 23155462  T
Q  333 aaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||| |||||| ||| ||||||||||||||||||||||| ||  | || ||||||||||||| ||||||||||||||||||||||||    
T  23155461 aaaattgctatgacatttaactactttattcaattctttaatctgtatgcaattggctaaagcgatactcattttaaaacggatggagta 23155372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 45933737 - 45933499
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    |||||| |||||||| |  ||| |||||||| || |||| |||| ||| ||||    
T  45933737 ttgttttaaaatgaatgtcactttcagttttcaatgcaataat----ttttcttttcaattgcacccttcaattaatactatgttacactatttctaaag 45933642  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||||| |||||||||||||||| ||| ||||||||| | ||||||| |||||||| |||||  |||||||| |||||||||||| ||||| ||     
T  45933641 tattatttttt-tttaatgaaaaacaaaccaaaagttgattaagataatttgataaaattgctatgatatttgactattttattcaattccttaatctgt 45933543  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || ||  |||||||||||||||||||||||||||||| ||||||    
T  45933542 gtgcaagtggctaaagcgacactcattttaaaacggagggagta 45933499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 179 - 374
Target Start/End: Original strand, 36807933 - 36808127
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||| ||||||| ||||  ||| |||| ||||||||||||||||| |||||||||| |||| ||||||||| | |||| ||||||| |||||    
T  36807933 ttgttttaaaataaatgtcattttcgcttttcaatacaataataactttttcttttcaattgtactcttcaattaatatcatgttacactactttcaaag 36808032  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaat 374  Q
    | ||||||||||||||||||||||||| ||||||||||||| || ||||||| |||||||| |||||| |||||||||||||||  ||||||||||    
T  36808033 t-ttattttttctttaatgaaaaacaactcaatagttgattcgggtaatttgataaaattgctatgacatttgactactttattatattctttaat 36808127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 40339420 - 40339614
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         |||||||||||||| ||||||||||| ||| |||||||||||||||||| | | |||||||||    
T  40339420 tccgttttaaaatgagtgtcgttttagccaaaaagaattgtttcaaaatgactgtcactttcaattttcaatgcaataataactttattt-ttcaattgt 40339518  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |  ||| |||||||||||   || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  40339519 acccttcaattaatattattatacactacttccaaagtattcttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 40339614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 142 - 374
Target Start/End: Original strand, 41137690 - 41137921
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    |||||||||||||||||||||||||| |         |||||||| |||||||| |||||| |||||||||||||||||||| ||||||| |||||||||    
T  41137690 tccgttttaaaatgagtgtcgttttacc-aaaaaaaattgtttcacaatgaatgccacttttagtttccaatgcaataataattttttcttttcaattgt 41137788  T
Q  242 attctttaattaatattacgttaaactacttccaaagtatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgt 340  Q
    |  ||| |||| ||| || |||| ||||||||||||||| || |||||||||||||| ||| |||| || |||||||||||| ||||||||||||||||     
T  41137789 acccttcaattgatactatgttacactacttccaaagtaatatttttttctttaatg-aaatcaaaccagtagttgattaggataatttggtaaaattgc 41137887  T
Q  341 tatgacttttgactactttattcaattctttaat 374  Q
    |||||| |||||||||||||||| ||| ||||||    
T  41137888 tatgacatttgactactttattccattttttaat 41137921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 186 - 337
Target Start/End: Original strand, 10476141 - 10476291
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||  ||| |||||||| ||   || ||||||||||||||||||||    
T  10476141 aaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta-tatacactacttccaaagtattatt 10476239  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    | || |||| | ||||||||||||||||||||||||| ||||||| ||||||    
T  10476240 tattttttagtaaaaaacaaatcaatagttgattaggataatttgataaaat 10476291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 179 - 333
Target Start/End: Original strand, 1031153 - 1031306
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| |||| | |||||||||| |||| |||||||| ||   || ||||||||||||     
T  1031153 ttgtttcaaaatgaatgtcaccttcagtttccattgcaataataacattttattttcaattgtactcttcaattaatacta-tatacactacttccaaat 1031251  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggta 333  Q
    |||||||||||||||||| |||||  |||||||||||||||| | ||||||||||    
T  1031252 tattattttttctttaataaaaaaagaatcaatagttgattatgataatttggta 1031306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 282 - 424
Target Start/End: Original strand, 10599464 - 10599606
Alignment:
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtc 381  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| |||| ||||| |  ||     
T  10599464 tattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatatatgtg 10599563  T
Q  382 cagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    || |||  |||| |||||||||||||||||||||  |||||||    
T  10599564 caattgattaaaacgacactcattttaaaacggagagagtact 10599606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 179 - 332
Target Start/End: Original strand, 48843550 - 48843703
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||  ||| | |||||| ||   || ||||||||||| |    
T  48843550 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctcttcaattatacccttaatttaatacta-tatacactacttccaacg 48843648  T
Q  279 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggt 332  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  48843649 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggt 48843703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 24133283 - 24133124
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||  ||| |||||||| ||   || ||||| ||||||     
T  24133283 ttgttttaaactgaacgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatacta-tatatactacatccaaaa 24133185  T
Q  279 tattattttttctttaatgaaaaacaaatcaat--agttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  24133184 tattattttttctttaatgaaaaacaaatcaatacagttgattagtataatttggtaaaat 24133124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 183 - 337
Target Start/End: Complemental strand, 21752260 - 21752107
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||  ||||||||||   || |||||| ||||  | | |||| || |||||||||    
T  21752260 ttcaaaataaatgtcattttcagtttccaatgcaataataactttttcgtttcaattgtaccattcaattaacattatat-acactattttcaaagtatt 21752162  T
Q  283 attttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  21752161 attttatctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 21752107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 297 - 422
Target Start/End: Complemental strand, 7795278 - 7795153
Alignment:
Q  297 gaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcg 396  Q
    |||||||||| |||||| |||||||| |||||||||||||||| |||||| ||| |||||||||||  |||| |||||||| || || ||||||||||||    
T  7795278 gaaaaacaaaccaataggtgattaggataatttggtaaaattgctatgacattttactactttatttcattccttaatttgtgtacaattggctaaagcg 7795179  T
Q  397 acactcattttaaaacggatggagta 422  Q
    ||||||||||| ||||||||||||||    
T  7795178 acactcattttgaaacggatggagta 7795153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 185 - 337
Target Start/End: Original strand, 28289219 - 28289370
Alignment:
Q  185 caaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattat 284  Q
    |||||| ||||||||||| ||||| ||||||||||||||| |||||| ||||||||||  ||| |||||||| ||  | | ||||||| |||||||||||    
T  28289219 caaaataaatgtcactttgagttttcaatgcaataataacattttcttttcaattgtac-cttcaattaatactatat-acactactttcaaagtattat 28289316  T
Q  285 ttt-ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  28289317 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 28289370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 8293220 - 8293064
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||| ||||||||| | | || || |||||||||||||||| | |||||||||||  ||||||||||||||  | | ||||||||||||     
T  8293220 ttgttttaaaatgattgtcacttttaatatcaaa-gcaataataactttttattttcaattgtatcttttaattaatattatat-acactacttccaaat 8293123  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||| |||||||||||||||||||||||||| | | ||||||||||||||    
T  8293122 tattattttttctgtaatgaaaaacaaatcaatagttgatcacgataatttggtaaaat 8293064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 179 - 322
Target Start/End: Complemental strand, 19105154 - 19105012
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  ||| |||||||| ||   || | |||||  |||     
T  19105154 ttgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttcttttcaattgtacccttcaattaatacta-tatacattacttttaaaa 19105056  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattagg 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  19105055 cattattttttctttaatgaagaacaaatcaatagttgattagg 19105012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 33939887 - 33939729
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||||||||||||||  |||||||||| |||||||||||||||| | ||||||||   || |||||||||||   || |||| ||||||||    
T  33939887 ttgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctttccaattgtaccattcaattaatatta-tatacactaattccaaag 33939789  T
Q  279 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||| ||||||||||||||||||| ||| ||| ||||||||||  ||||||||||||||    
T  33939788 tattacttttttctttaatgaaaaataaaccaacagttgattagaataatttggtaaaat 33939729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 186 - 337
Target Start/End: Complemental strand, 40753574 - 40753425
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||||| ||||||||| ||||| |||||||| ||||||| ||||||||||   || |||||||| ||  | | ||||||| ||||||||||||    
T  40753574 aaaatgaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtaccattcaattaatactatat-acactactttcaaagtattatt 40753476  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||| ||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  40753475 ttt-ctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 40753425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 184 - 337
Target Start/End: Complemental strand, 29636375 - 29636222
Alignment:
Q  184 tcaaaatgaatgtcactttcagtttccaatgcaataataactt-tttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    ||||||| |||||||||||||||||| |||||||||||||||| ||| | |||||||  || ||| |||||||| ||  | | |||||||| ||||||||    
T  29636375 tcaaaataaatgtcactttcagtttctaatgcaataataacttcttttttttcaattacatccttcaattaatactatat-acactacttctaaagtatt 29636277  T
Q  283 attttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||| ||||| || |||||| ||||||| ||||||    
T  29636276 attttttctttaatgaaaaacaaaccaataatttattaggataatttgataaaat 29636222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 37490782 - 37490943
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgt--taaactacttccaa 276  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||   || |||||||| ||  |  || |||||||  ||    
T  37490782 ttgtatcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtacctttcaattaatactatatagtacactacttggaa 37490881  T
Q  277 agtatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||| |||||||||||||||||||||||  ||||||| |||| | ||||||||||||||    
T  37490882 agtattatttttttctttaatgaaaaacaaactaatagtttattaagataatttggtaaaat 37490943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 143 - 337
Target Start/End: Complemental strand, 45500016 - 45499820
Alignment:
Q  143 ccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||| ||||||||||||||||||||         |||||||||||||||| |||||||||||||||||||| |||||||  |||||| ||||| |||     
T  45500016 ccgtttcaaaatgagtgtcgttttagccaaaagtagttgtttcaaaatgaatttcactttcagtttccaatgccataataatattttcttttcaaatgtg 45499917  T
Q  243 ttctttaattaatattacgttaaactacttccaaagtattatt----ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
       || |||||||||||   ||  |||||| ||||||||||||    ||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  45499916 cctttcaattaatattatacta--ctactttcaaagtattattatttttttctttaatgaaaaacaaaccaatagttaattaggataatttggtaaaat 45499820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 186 - 337
Target Start/End: Complemental strand, 6563560 - 6563414
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    |||||||| ||||||||||||||  |||  |||||||||||||||| ||||||||||  ||| |||||||||||   ||   ||||||||||||||||||    
T  6563560 aaaatgaacgtcactttcagtttttaatttaataataactttttcttttcaattgtacccttcaattaatatta---ta---tacttccaaagtattatt 6563467  T
Q  286 tttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||| ||||||||||||||||| |||| |||||||||| ||||||| ||||||    
T  6563466 tttttctttaatgaaaaacaaaccaatggttgattaggataatttgataaaat 6563414  T

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Target: chr7; HSP #37
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 21819282 - 21819438
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||| || | ||||||||| |||| ||||||||| || || | |||||||||||  || |||||||| ||  | | | ||||||||||     
T  21819282 ttgtttcaaaatgaaagttattttcagttttcaatacaataataaattctttt-ttcaattgtatcattcaattaatactatat-acattacttccaaaa 21819379  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  21819380 tattattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaat 21819438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 10599212 - 10599315
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagt 279  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||| | ||  ||||||  || |||| ||||||||||||||    
T  10599212 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtacttttctattaatgctatgttacactacttccaaagt 10599311  T
Q  280 atta 283  Q
    ||||    
T  10599312 atta 10599315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 186 - 307
Target Start/End: Original strand, 30312463 - 30312583
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgt-taaactacttccaaagtattat 284  Q
    |||||||||||||||||| |||| |||| ||||||||| ||||||| ||||||||||  ||| ||||||||||  || || |||||||||||||||||||    
T  30312463 aaaatgaatgtcactttcggttttcaatacaataataattttttcttttcaattgtacccttcaattaatatt--gtatacactacttccaaagtattat 30312560  T
Q  285 tttttctttaatgaaaaacaaat 307  Q
    |||||||||| | ||||||||||    
T  30312561 tttttctttagtaaaaaacaaat 30312583  T

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Target: chr7; HSP #40
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 6521973 - 6522062
Alignment:
Q  335 aattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||||||||| |||||||||||||||  |||| |||||||| || || ||||||||||||||||||||||||||||||| ||||||||    
T  6521973 aattgttatgacatttgactactttatttcattccttaatttgtgtgcaattggctaaagcgacactcattttaaaacggagggagtact 6522062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 716052 - 715953
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  716052 tccgttttaaaatgagtgtcgctttagc-caaaaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgt 715954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 142 - 293
Target Start/End: Original strand, 8603935 - 8604086
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnn-ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattg 240  Q
    ||||||||||||||||||||||||||||          |||||| |||||||| |||||||||| |||||||||||||||||||||||||| ||||||      
T  8603935 tccgttttaaaatgagtgtcgttttagccataaaaatattgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttcttttcaatga 8604034  T
Q  241 tattctttaattaatattacgttaaactacttccaaagtattattttttcttt 293  Q
    ||  ||| |||||||| ||   || ||||||||||||||||||||||||||||    
T  8604035 tacccttcaattaatacta-tatacactacttccaaagtattattttttcttt 8604086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 12977872 - 12977776
Alignment:
Q  146 ttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||||| ||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  12977872 ttttaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgta 12977776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 32345837 - 32345746
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| ||||||||||||||||||||  ||||| || || || ||||||||||||||||||||||| ||||||| ||||||    
T  32345837 gtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 32345746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 18292333 - 18292397
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtat 243  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  18292333 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcctttcaattgtat 18292397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 39117491 - 39117407
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||||||||||||| |||||||||||||||| |||||||||| || || ||  ||| ||||||||||||||||||||||||||    
T  39117491 gtaaaattgttatgacatttgactactttattccattctttaatctgtgtgcaagtggataaagcgacactcattttaaaacgga 39117407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 179 - 322
Target Start/End: Original strand, 42753706 - 42753845
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||  ||||| |||||| |||  ||| |||||||||||   || |||| ||  ||||    
T  42753706 ttgtttcaaaatgaatgtcactttcaatttccaatacaataataacactttcttttcaatcgta-ccttcaattaatatta-tatacactatttttaaag 42753803  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattagg 322  Q
    ||||||||||  |||||||||||| ||| |||||||||||||||    
T  42753804 tattattttt--tttaatgaaaaataaaccaatagttgattagg 42753845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 34274792 - 34274855
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  34274792 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctttttaattgta 34274855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 36447072 - 36446981
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| |||||||||||||||| |||| |||||||| || || ||| ||||||| |||||||||||||||| |||||||||    
T  36447072 gtaaaattgctatgacatttgactactttattccattcattaatttgtgtgcaattgtctaaagcaacactcattttaaaacagatggagta 36446981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 18270579 - 18270684
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctc-ttcaattgtattctttaattaatattacgttaaactacttccaaagtat 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||  ||  |||||||||| |   | ||||||||||||||||    
T  18270579 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcactttcaattgtaccctccaattaatatt-ctgcacactacttccaaagtat 18270677  T
Q  282 tattttt 288  Q
    || ||||    
T  18270678 tactttt 18270684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 34012559 - 34012612
Alignment:
Q  284 ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34012559 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 34012612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 135 - 314
Target Start/End: Original strand, 4268565 - 4268744
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttc-tct 233  Q
    |||||| |||||||||||||||||||||||||||          ||||||||||||||||||| |||||| ||||||||| |||||||  |||||  | |    
T  4268565 tattccctccgttttaaaatgagtgtcgttttagacaaaagaaattgtttcaaaatgaatgtcgctttcaatttccaatgtaataatattttttttgttt 4268664  T
Q  234 tcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagt 314  Q
    |||||||||   |  |||||||| ||  | | | |||||||||| ||||||||| | ||||||||||||||||||||||||    
T  4268665 tcaattgtaccttccaattaatactatat-atattacttccaaattattattttctttttaatgaaaaacaaatcaatagt 4268744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 37502321 - 37502377
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  37502321 ttcaaaatgaacgtcactttcagtttccaatgcaataataactttttcttttcaatt 37502377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 40927163 - 40927211
Alignment:
Q  181 gtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 277
Target Start/End: Original strand, 34012124 - 34012256
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         |||||| ||||||||||||||||| ||||||||||| | |||||||||||| | |||||||||    
T  34012124 tccgttttaaaatgagtgtcgttttagc--caaaaaattgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttttttttcaattgt 34012221  T
Q  242 attctttaattaatattacgttaaactacttccaaa 277  Q
    |  ||| |||||||| ||   |||||||||||||||    
T  34012222 acccttcaattaatacta-tataaactacttccaaa 34012256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 2296999 - 2297088
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttct 231  Q
    ||||||| ||||||||||||| ||||||         |||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  2296999 tccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttct 2297088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 25440884 - 25440933
Alignment:
Q  193 atgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25440884 atgtcactttcagtttccaatgcaataataactttttcttttcaattgta 25440933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 42285906 - 42285983
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||  ||| ||||||||    
T  42285906 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaata 42285983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 47461427 - 47461370
Alignment:
Q  280 attattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  47461427 attattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 47461370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 24780459 - 24780399
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| | |||||||    
T  24780459 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttattttcaatt 24780399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 25055869 - 25055937
Alignment:
Q  269 acttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||  |||| | |||| |||||||||    
T  25055869 acttccaaaatattattttttctttaatgaaaaacaaatcaatagtaaattatgataatgtggtaaaat 25055937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 187 - 337
Target Start/End: Original strand, 31196575 - 31196723
Alignment:
Q  187 aaatgaatgtcactttcagtttccaatgcaataataac-tttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    |||||||||||||||| | |||| ||||  |||||||| ||||||| |||||||||   ||| |||||||||||   || |||| || ||||||||||||    
T  31196575 aaatgaatgtcactttgaatttctaatgttataataacttttttcttttcaattgtgcccttcaattaatatta-tatacactaatttcaaagtattatt 31196673  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||  ||||| ||||||||||||||||  | ||||||| ||||||    
T  31196674 ttttctttaa--aaaaataaatcaatagttgattgtgataatttgataaaat 31196723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 44567194 - 44567130
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtat 243  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||||    
T  44567194 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttcttttcaattgtat 44567130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 266 - 332
Target Start/End: Original strand, 7759344 - 7759410
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggt 332  Q
    ||||||| |||||||||||||||||||||||  ||||||||  |||||||||||||| |||||||||    
T  7759344 actactttcaaagtattattttttctttaatagaaaacaaactaatagttgattaggataatttggt 7759410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 6747225 - 6747274
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttt 228  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  6747225 ttgtttaaaaacgaatgtcactttcagtttccaatgcaataataactttt 6747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 8334469 - 8334365
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctctt 234  Q
    |||||| ||||||| |||||||||||||||| |||         |||||||||||| ||||||||||||| |||||||| ||||||||| |||| || ||    
T  8334469 tattccctccgtttcaaaatgagtgtcgtttaagccaaacaaaattgtttcaaaatcaatgtcactttcattttccaatccaataataaattttcctatt 8334370  T
Q  235 caatt 239  Q
    |||||    
T  8334369 caatt 8334365  T

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Target: chr7; HSP #67
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 39557284 - 39557380
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    |||||||||||||||||||||||||| ||        || ||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  39557284 tccgttttaaaatgagtgtcgttttaactaaaaaaa-ttattttaaaataaatgtcactttcagttttcaatgtaataataattttttctcttcaatt 39557380  T

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Target: chr7; HSP #68
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 19906564 - 19906655
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| |||||||| ||||||| |||| |||||    || || ||||||||||||||||||||||| ||||||| ||||||    
T  19906564 gtaaaattgctatgacatttgactattttattccattccttaatccatgtgcaattggctaaagcgacactcattttgaaacggagggagta 19906655  T

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Target: chr7; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 26963631 - 26963722
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| |||||||| ||||||| |||  |||||||| ||  |  ||| |||||| ||||||||||| ||||||||||||||    
T  26963631 gtaaaattgttatgacatttgactattttattccatttcttaatttgtgtgtaaatggttaaagcaacactcattttgaaacggatggagta 26963722  T

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Target: chr7; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 420
Target Start/End: Complemental strand, 8334316 - 8334206
Alignment:
Q  310 atagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaa 409  Q
    ||||||||||| |  ||||||  |||||||||||||| |||||||||||||||  |||  ||||| || || || ||||| ||| |||||| || |||||    
T  8334316 atagttgattaagagaatttgagaaaattgttatgacatttgactactttattacatttcttaatctgtgtgcaattggcgaaaacgacacacaatttaa 8334217  T
Q  410 aacggatggag 420  Q
    |||||||||||    
T  8334216 aacggatggag 8334206  T

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Target: chr7; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 16564885 - 16564799
Alignment:
Q  214 gcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaa 300  Q
    |||||||||||||||| | ||||||| ||   || ||||||||||| |||| | |||||||||| || |||||||||||||||||||    
T  16564885 gcaataataactttttattttcaattatagcattcaattaatattatgttacattacttccaaaataatattttttctttaatgaaa 16564799  T

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Target: chr7; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 300
Target Start/End: Original strand, 16600777 - 16600863
Alignment:
Q  214 gcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaa 300  Q
    |||||||||||||||| | ||||||| ||   || ||||||||||| |||| | |||||||||| || |||||||||||||||||||    
T  16600777 gcaataataactttttattttcaattatagcattcaattaatattatgttacattacttccaaaataatattttttctttaatgaaa 16600863  T

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Target: chr7; HSP #73
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 385 - 423
Target Start/End: Complemental strand, 18733445 - 18733407
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18733445 ttggctaaagcgacactcattttaaaacggatggagtac 18733407  T

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Target: chr7; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 16564801 - 16564720
Alignment:
Q  334 aaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||| |||||| |||||||||||||||  |||| ||||| ||  | || |||| ||||||||||||||||||||||||||    
T  16564801 aaattgctatgacatttgactactttatttcattccttaatctgtatgcaattggttaaagcgacactcattttaaaacgga 16564720  T

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Target: chr7; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 415
Target Start/End: Original strand, 16600861 - 16600942
Alignment:
Q  334 aaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||| |||||| |||||||||||||||  |||| ||||| ||  | || |||| ||||||||||||||||||||||||||    
T  16600861 aaattgctatgacatttgactactttatttcattccttaatctgtatgcaattggttaaagcgacactcattttaaaacgga 16600942  T

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Target: chr7; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 337
Target Start/End: Original strand, 7335372 - 7335436
Alignment:
Q  274 caaagtattattttttctttaatg-aaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||  ||||||||| ||| ||||||||| | ||||||||||||||    
T  7335372 caaagtattattttttctttaatttaaaaacaaaccaacagttgattatgataatttggtaaaat 7335436  T

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Target: chr7; HSP #77
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 40207361 - 40207294
Alignment:
Q  360 attcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtacttgt 427  Q
    ||||||| | ||||| || || || ||||||||||| ||||||||||| |||||||||||||||||||    
T  40207361 attcaataccttaatatgtgtgcaattggctaaagcaacactcattttgaaacggatggagtacttgt 40207294  T

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Target: chr7; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 47187749 - 47187807
Alignment:
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||| ||||||| ||||||| || || ||| ||||||||||||||    
T  47187749 tattattttttctttaataaaaaacatatcaataattaataaggataatttggtaaaat 47187807  T

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Target: chr7; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 5723170 - 5723227
Alignment:
Q  365 attctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||| |||||||| || || ||| ||||| ||||||||||||||||||||||||||||    
T  5723170 attccttaatttgtgtgcaattgactaaaacgacactcattttaaaacggatggagta 5723227  T

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Target: chr7; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 425
Target Start/End: Complemental strand, 22297986 - 22297949
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagtactt 425  Q
    |||||| |||||||||||||||||||||||||||||||    
T  22297986 gctaaaacgacactcattttaaaacggatggagtactt 22297949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 40299022 - 40299083
Alignment:
Q  365 attctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtacttg 426  Q
    |||| |||||||| || || ||||||||| ||||||||||||| ||||||| ||||||||||    
T  40299022 attccttaatttgtgtgcaattggctaaaacgacactcattttgaaacggagggagtacttg 40299083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 19303450 - 19303390
Alignment:
Q  277 agtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||| ||||||||||||||||| ||| |||| |||||||| | |||||| |||||||    
T  19303450 agtattatattttctttaatgaaaaataaaccaatggttgattatgataatttagtaaaat 19303390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 31930006 - 31929950
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||| | | ||||||||| |||||||||||||| ||||||| ||||||||||    
T  31930006 aaaatgaatattattttcagttttcaatgcaataataattttttcttttcaattgta 31929950  T

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Target: chr7; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 32501935 - 32501855
Alignment:
Q  146 ttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactt 226  Q
    |||||||||||||||||||||| |         |||||| ||||| ||| ||||||||||||| |||||||||||||||||    
T  32501935 ttttaaaatgagtgtcgttttaacaaaaaaaaattgttttaaaataaatatcactttcagttttcaatgcaataataactt 32501855  T

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Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 16565253 - 16565214
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaat 218  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  16565253 ttgtttcaaaatgaatgtcattttcagtttctaatgcaat 16565214  T

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Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 16600409 - 16600448
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaat 218  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  16600409 ttgtttcaaaatgaatgtcattttcagtttctaatgcaat 16600448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 424
Target Start/End: Complemental strand, 40339450 - 40339411
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  40339450 ttggctaaaacgacactcattttaaaacggagggagtact 40339411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 43813505 - 43813536
Alignment:
Q  384 gttggctaaagcgacactcattttaaaacgga 415  Q
    ||||||||||||||||||||||||||||||||    
T  43813505 gttggctaaagcgacactcattttaaaacgga 43813536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 169
Target Start/End: Complemental strand, 44453371 - 44453340
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagc 169  Q
    ||||||||||||||||||||||||||||||||    
T  44453371 tccttccgttttaaaatgagtgtcgttttagc 44453340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 415
Target Start/End: Original strand, 716022 - 716052
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacgga 415  Q
    |||||||||||||||||||||||||||||||    
T  716022 ttggctaaagcgacactcattttaaaacgga 716052  T

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Target: chr7; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 30833257 - 30833291
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||| ||||||    
T  30833257 gctaaagcgacactcattttaaaacggaaggagta 30833291  T

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Target: chr7; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 427
Target Start/End: Original strand, 32345998 - 32346040
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagtacttgt 427  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||    
T  32345998 ttggctaaaacgacactcattttgaaacggatggagtagttgt 32346040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 12977846 - 12977883
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  12977846 ttggctaaagcgacactcattttaaaaaggagggagta 12977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 18292325 - 18292288
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  18292325 ttggctaaagcgacactcattttgaaacggagggagta 18292288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 24425029 - 24424960
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattcttt 248  Q
    ||||| |||||||||||| | ||| | |||| ||||||||| ||| | ||||| ||||||||||||||||    
T  24425029 ttgttccaaaatgaatgttatttttaatttctaatgcaatattaattatttcttttcaattgtattcttt 24424960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 412
Target Start/End: Complemental strand, 31416753 - 31416672
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaac 412  Q
    ||||||||||| |||| ||||| |||||||||  |||| |||||| | || || || ||||||| |||| ||||||||||||    
T  31416753 gtaaaattgttttgacatttgattactttatttcattccttaattcgtgtgcaattagctaaagtgacaatcattttaaaac 31416672  T

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Target: chr7; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 31930024 - 31930057
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||| ||||||||||||||||||||    
T  31930024 ctaaagcgacacttattttaaaacggatggagta 31930057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 32097355 - 32097322
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttag 168  Q
    |||||| |||||||||||||||||||||||||||    
T  32097355 tattccctccgttttaaaatgagtgtcgttttag 32097322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 33845388 - 33845336
Alignment:
Q  370 ttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    |||||||||||  | ||||||||| ||||||||||||||||||||| |||||||    
T  33845388 ttaatttgcgtgtaattggctaaa-cgacactcattttaaaacggagggagtac 33845336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 385 - 413
Target Start/End: Original strand, 18528638 - 18528666
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacg 413  Q
    |||||||||||||||||||||||||||||    
T  18528638 ttggctaaagcgacactcattttaaaacg 18528666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 23935408 - 23935376
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagt 421  Q
    ||||| |||||||||||||||||||||||||||    
T  23935408 ctaaaacgacactcattttaaaacggatggagt 23935376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 24780366 - 24780314
Alignment:
Q  285 tttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||| ||||| ||| ||||||| ||||||| |||||| |||||||    
T  24780366 tttttctttaattaaaaataaaccaatagtagattaggataatttagtaaaat 24780314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 388 - 424
Target Start/End: Complemental strand, 37502308 - 37502272
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  37502308 gctaaaacgacactcattttgaaacggatggagtact 37502272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 1e-92; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 145 - 425
Target Start/End: Complemental strand, 52957983 - 52957703
Alignment:
Q  145 gttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtatt 244  Q
    |||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||      
T  52957983 gtttcaaaatgagtgtcgttttagccaaaaagaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacc 52957884  T
Q  245 ctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatg 344  Q
    ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  52957883 cttcaattaatattatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatg 52957784  T
Q  345 acttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    || |||||||||||||||| |||| ||||| || || || ||||||||||||||||||||||| |||||||  ||||||||    
T  52957783 acatttgactactttattccattccttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagtgagtactt 52957703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 183 - 422
Target Start/End: Complemental strand, 2728553 - 2728314
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||  |||  ||| | |||||| || |||| |||||||||||||||||    
T  2728553 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaacagtacccttcagttaatactatgttatactacttccaaagtatt 2728454  T
Q  283 attttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtcc 382  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| || || |    
T  2728453 attttttctttaatgaaaaacacaccaatagttgattaggataatttggtaaaattgttatgacatttgactactttattcaattccttaatatgtgtgc 2728354  T
Q  383 agttggctaaagcgacactcattttaaaacggatggagta 422  Q
    | ||||||||||||||||||||||| ||||||||||||||    
T  2728353 aattggctaaagcgacactcattttgaaacggatggagta 2728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 145 - 422
Target Start/End: Complemental strand, 52848247 - 52847970
Alignment:
Q  145 gttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtatt 244  Q
    |||||||||||||||||||||||||         |||||| ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||      
T  52848247 gttttaaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttcaattgtacc 52848148  T
Q  245 ctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatg 344  Q
    ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||||    
T  52848147 cttcaattaatattatgttacactacttccaaagtattattttttctttaatgaaaaacaagccaatagttgattaggataatttggtaaaattgctatg 52848048  T
Q  345 acttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || ||||||||||||||||||||  ||||| ||  | || ||||||||| | ||||||||||||||||||| ||||||    
T  52848047 acatttgactactttattcaatttcttaatctgtatgcaattggctaaaacaacactcattttaaaacggagggagta 52847970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 179 - 415
Target Start/End: Original strand, 1819560 - 1819796
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||| |||||||| || |||| ||||||| |||||    
T  1819560 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 1819659  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||  |||||||||| ||     
T  1819660 tattattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaattgctatgacatttgactactttatttcattctttaatctgt 1819759  T
Q  379 gtccagttggctaaagcgacactcattttaaaacgga 415  Q
    || || ||| ||||||||||| |||||||||||||||    
T  1819760 gttcaattgactaaagcgacattcattttaaaacgga 1819796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 40345506 - 40345263
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||| |||||||| || |||| |||||||||||||    
T  40345506 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 40345407  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||| | ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||||||||||  |||| ||||||||     
T  40345406 tattgtattttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaattgatatgacatttgactactttatttcattcattaatttgt 40345307  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||||||||||||||| ||||||||||||||| ||||||    
T  40345306 gtgcaattggctaaagcgacattcattttaaaacggagggagta 40345263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 19878646 - 19878889
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||| ||| || |||| |||||||||||||    
T  19878646 ttgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaatttatactatgttacactacttccaaag 19878745  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||| ||||| |||||||||| |||| ||||| |      
T  19878746 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgacatttgattactttattccattccttaatctct 19878845  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |  || ||||||||||||||| ||||||| ||||||| ||||||    
T  19878846 gcgcaattggctaaagcgacattcattttgaaacggagggagta 19878889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 179 - 400
Target Start/End: Original strand, 20448037 - 20448258
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| ||  ||| |||||||| || |||| |||||||||||||    
T  20448037 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattatacccttcaattaatactatgttacactacttccaaag 20448136  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||| ||||| ||     
T  20448137 tattattttttctttaatgaaaatcaaaccaatagttgattaggataatttggtaaaattgctatgacatttaactactttattcaattccttaatatgt 20448236  T
Q  379 gtccagttggctaaagcgacac 400  Q
    || || ||||||||||||||||    
T  20448237 gtgcaattggctaaagcgacac 20448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 144 - 422
Target Start/End: Original strand, 27653639 - 27653915
Alignment:
Q  144 cgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtat 243  Q
    |||||||||||||||||||||||| ||        |||||| ||||| ||||||| ||| |||||| |||||||| |||||||||| |  |||||||||     
T  27653639 cgttttaaaatgagtgtcgttttaactaaaataaattgttttaaaataaatgtcatttttagtttctaatgcaatgataacttttttt--tcaattgtac 27653736  T
Q  244 tctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttat 343  Q
     ||| |||||||| || |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||    
T  27653737 ccttcaattaatactatgttacactacttccaaaatattattttttctttaatgaaaaacaactcaatagttgattaggataatttggtaaaattgctat 27653836  T
Q  344 gacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||| |||||||||||||||| |||| |||||||| || || ||||||||||||||||||||||| |||| |||| ||||    
T  27653837 gacatttgactactttattccattccttaatttgtgtgcaattggctaaagcgacactcattttgaaacagatgaagta 27653915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 179 - 421
Target Start/End: Complemental strand, 49080635 - 49080394
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||  ||| ||||||||||| |||| ||||||||| |||    
T  49080635 ttgtttcaaaatgaatgtcactttcagtttt-aatgcaataataactttttattttcaattgtacccttcaattaatattatgttacactacttccgaag 49080537  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||  |||||| |||||||||||||||  |||| ||||| ||     
T  49080536 tattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattactatgacatttgactactttattttattccttaatatgt 49080437  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagt 421  Q
    || || |||| |||||||||||| ||||| ||||||| |||||    
T  49080436 gtgcaattggataaagcgacacttattttgaaacggagggagt 49080394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 37654408 - 37654651
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||  ||| |||||||| || |||| |||||||||||||    
T  37654408 ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 37654506  T
Q  279 tattattttttctttaatg-aaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttg 377  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||||||||||  |||| ||||| ||    
T  37654507 tattattttttctttaatgaaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttatttcattccttaatatg 37654606  T
Q  378 cgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     || || ||||||||| ||||||||||||| ||||||| ||||||    
T  37654607 tgtgcaattggctaaaacgacactcattttgaaacggagggagta 37654651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 29519684 - 29519441
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||| |||||||| || |||| |||||||| ||||    
T  29519684 ttgtttcaaaataaatgtcacttttagtttccaatgcaataataactttttattttcaattgtatccttcaattaatactatgttacactacttctaaag 29519585  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||||||||||||||||||| || |||||||| |||||  ||||||||||||||||||||||  |||||||| ||||||  |||| ||||| ||     
T  29519584 tattattttttctttaatgaaaaacgaaccaatagtttattagagtaatttggtaaaattgttatgatatttgactattttatttcattccttaatatgt 29519485  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||  | ||||||||| ||||||||||||||||||||||| ||||    
T  29519484 gtgtaattggctaaaacgacactcattttaaaacggatgaagta 29519441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 53814656 - 53814413
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||| |||||||||||||||||| ||||  |||||||||||||||||||| | || |||||||  ||| |||||||| || |||| ||||||| |||||    
T  53814656 ttgttccaaaatgaatgtcacttttagttaacaatgcaataataactttttatttttaattgtacccttcaattaatactatgttacactactttcaaag 53814557  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |||||||||||||||  |||| ||||| ||     
T  53814556 tattattttttctttaatgaaaaacaaatcaataattgattaggataatttggtaaaattgctatgacatttgactactttatttcattccttaatatgt 53814457  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || |  |||| |||| ||||||||||||||||||||||||||||    
T  53814456 gtgcgattggttaaaacgacactcattttaaaacggatggagta 53814413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 142 - 412
Target Start/End: Complemental strand, 45043784 - 45043514
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||  |        |||||| ||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  45043784 tccgttttaaaatgagtgtcgttttatttaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgt 45043685  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| || |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |    
T  45043684 acccttcaattaatactatgttacactacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgct 45043585  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaac 412  Q
    ||||| |||||||||||||||  |||| ||||  || || || ||| ||||| ||||||| ||||| ||||    
T  45043584 atgacatttgactactttattacattccttaaaatgtgtgcaattgactaaaacgacacttattttgaaac 45043514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 179 - 415
Target Start/End: Original strand, 24940877 - 24941114
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||  ||| |||||||| || |||| |||||||  |||     
T  24940877 ttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttaaaaa 24940976  T
Q  279 tattatttt-ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttg 377  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||  ||    
T  24940977 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgacatttgactactttattccattctttaacatg 24941076  T
Q  378 cgtccagttggctaaagcgacactcattttaaaacgga 415  Q
     || || |||| |||| ||||||||||||| |||||||    
T  24941077 tgtgcaattggttaaaacgacactcattttgaaacgga 24941114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 2493100 - 2493343
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||  ||| |||||||| || |||| | ||||||||| |    
T  2493100 ttgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacattacttccaagg 2493199  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||| ||||||||||||||||||||  ||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||  |||| ||||| ||     
T  2493200 tattatcttttctttaatgaaaaacaacccaatagttgattaggataatctggtaaaattgctatgacatttgactactttatttcattccttaatatgt 2493299  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||||| ||| ||||||||||||| ||||||||||||||    
T  2493300 gtgcaattggcaaaaacgacactcattttgaaacggatggagta 2493343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 142 - 422
Target Start/End: Complemental strand, 41920505 - 41920225
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||| ||||||| |        |||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||| |    
T  41920505 tccgttttaaaatgagtgttgttttagttaaaaaaaattgttttaaaataaatgtcattttcagtttccaaagcaataataactttttcttttcaattat 41920406  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| ||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| |    
T  41920405 acccttcaattaatattatgttccactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattgct 41920306  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || || |||||||| |||| |||||||||| || || || || ||||||  |||||| ||||| ||||||| ||||||    
T  41920305 attacattcgactacttgattccattctttaatatgtgtgcaattagctaaaatgacacttattttgaaacggagggagta 41920225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 142 - 411
Target Start/End: Complemental strand, 44572063 - 44571792
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnn--ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    |||||||||||||||||||||||||||||          |||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  44572063 tccgttttaaaatgagtgtcgttttagctaaaaaaaaaattgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttcttttcaatt 44571964  T
Q  240 gtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattg 339  Q
    |||  ||| |||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | |||||||||||||||     
T  44571963 gtacccttcaattaataatatgttacactacttccaaagtattattttttctttaatgaaaaataaaccaatagttgattaagataatttggtaaaatta 44571864  T
Q  340 ttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaa 411  Q
     |||||| |||||||| ||||||  |||| ||||| ||  | || |||| ||||| ||||||||||||||||    
T  44571863 ctatgacatttgactattttatttcattcattaatatgtttgcaattggttaaagagacactcattttaaaa 44571792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 142 - 422
Target Start/End: Complemental strand, 54042379 - 54042098
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||| ||||||||         |||||| |||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||    
T  54042379 tccgtttaaaaatgagtgttgttttagcaaaaaaaaattgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttcttttcaattgt 54042280  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |   || ||||||||  | |||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||||||| |||||||| |    
T  54042279 acctttcaattaataccatgttacactacttccaaagtattattatttctttaatgaaaaacaaaccaatagttgattatgataatttgataaaattgct 54042180  T
Q  342 atgacttttgactactttattcaattctttaatt-tgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    | ||| |||||||| ||||||| |||  |||||| || || || ||||||||| ||||||||||||||||||||||||||||    
T  54042179 acgacatttgactattttattccatttcttaattatgtgtgcaattggctaaaacgacactcattttaaaacggatggagta 54042098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 179 - 415
Target Start/End: Complemental strand, 38991923 - 38991686
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttca---gtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttcca 275  Q
    |||||| |||| |||||||| |||||   ||||||||||||||||||||||||||| || |||||||||||| ||||||||||| |||| ||||||| ||    
T  38991923 ttgttttaaaacgaatgtcaatttcatcggtttccaatgcaataataactttttcttttgaattgtattcttcaattaatattatgttacactactttca 38991824  T
Q  276 aagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatt 375  Q
    ||||||||||||||||| ||||||||||||| ||||  ||||||||| ||||||||||||||||||||||| ||| |||||||||||  |||  |||||     
T  38991823 aagtattattttttcttgaatgaaaaacaaaccaat--ttgattaggataatttggtaaaattgttatgacatttaactactttattacatttcttaatc 38991726  T
Q  376 tgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    || || || ||| ||||| |||||||||||||||||||||    
T  38991725 tgtgtgcaattgactaaaacgacactcattttaaaacgga 38991686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 186 - 425
Target Start/End: Complemental strand, 56373729 - 56373488
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattac--gttaaactacttccaaagtatta 283  Q
    ||||||||| | |||||||||||| |||  |||||||| ||||||| ||||||||||  ||| |||||||||||   |||| ||||||||||||||||||    
T  56373729 aaaatgaatattactttcagtttctaatataataataattttttcttttcaattgtacccttcaattaatattatatgttacactacttccaaagtatta 56373630  T
Q  284 ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtcca 383  Q
    |||||||||||||||||||||||  ||| |||||||||| |||||||||||||||| || ||| |||||||||||||||| |||| ||||| ||  | ||    
T  56373629 ttttttctttaatgaaaaacaaaataattgttgattaggataatttggtaaaattgctacgacatttgactactttattccattccttaatatgtcttca 56373530  T
Q  384 gttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
     |||||||||| |||||||||||| |||||||||||||||||    
T  56373529 attggctaaagtgacactcattttgaaacggatggagtactt 56373488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 144 - 417
Target Start/End: Original strand, 19930677 - 19930949
Alignment:
Q  144 cgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtat 243  Q
    ||||||||||||| ||||||||||||         |||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||     
T  19930677 cgttttaaaatgaatgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttcttttcaattgtac 19930776  T
Q  244 tctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttat 343  Q
     ||| ||||||||||| |||| |||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| | ||||||| |||||||| |||    
T  19930777 ccttcaattaatattatgttacactacttccaaaatattatttttcctttaatgaaaaacaaaccaatagttgattaagataatttgataaaattgctat 19930876  T
Q  344 gacttttgactactttattcaattcttta-atttgcgtccagttggctaaagcgacactcattttaaaacggatg 417  Q
    ||| ||| |||| ||||||  |||| | | || ||||  || ||| ||||| ||||| |||||||||||||||||    
T  19930877 gacatttaactattttatttcattcctaatatatgcg--caattgactaaaacgacagtcattttaaaacggatg 19930949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 179 - 424
Target Start/End: Original strand, 49089462 - 49089706
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| | | ||||| ||  ||| ||||| || || |||| |||||||||||||    
T  49089462 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataacttttttt-tccaattatacccttcaattagtactatgttacactacttccaaag 49089560  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||  ||||||||| |||||  |||| ||||| ||     
T  49089561 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaattgttatgatatttgactacattatttcattccttaatatgt 49089660  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    || || |||  |||| |||||||||||||||||  || ||||||||    
T  49089661 gtgcaattgattaaaacgacactcattttaaaattgaaggagtact 49089706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 186 - 424
Target Start/End: Original strand, 18429995 - 18430232
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||| |||||| ||| ||| | ||||||||||||||||| ||||||||||  ||| |||||||| || |||| ||||||| | ||||||||||    
T  18429995 aaaatgaatgttactttcggttcccatt-caataataactttttcttttcaattgtacccttcaattaatactatgttacactactttctaagtattatt 18430093  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagt 385  Q
    |||||||||| ||||||||||  |||||||||||| | ||||||||||||||||||||||| |||||||||||||||  |||| ||||| || || || |    
T  18430094 ttttctttaaagaaaaacaaacgaatagttgattatgataatttggtaaaattgttatgacatttgactactttatttcattccttaatatgtgtgcaat 18430193  T
Q  386 tggctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||||||| ||||||||||| ||||||| | ||||||    
T  18430194 tggctaaagcaacactcattttgaaacggaggaagtact 18430232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 142 - 415
Target Start/End: Original strand, 34316183 - 34316454
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||  |        || ||| ||||| |||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  34316183 tccgttttaaaatgagtgtcgttttaattaaacaaaattattttaaaataaatgtcactttcagtttccaatgcaataataattttttattttcaattgt 34316282  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||||||  ||  ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |      
T  34316283 acccttcaattaatattatattgcactacttccaaaggattattctttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaatgg-- 34316380  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
     |||| |||||||| ||||||  |||| ||||| || || || |||| ||||| |||||||||||| |||||||    
T  34316381 ctgacatttgactattttatttcattccttaatctgtgtgcaattggttaaagtgacactcattttgaaacgga 34316454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 52253806 - 52254029
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctctt---caat 238  Q
    ||||||| ||||||| ||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||   ||||    
T  52253806 tccgtttcaaaatgaatgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctttttttcaat 52253905  T
Q  239 tgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaatt 338  Q
    ||||  ||| ||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||    
T  52253906 tgtacccttcaattaatattatgttccactacttccaaggtattattttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaatt 52254005  T
Q  339 gttatgacttttgactactttatt 362  Q
      |||||| |||||| ||||||||    
T  52254006 actatgacatttgacaactttatt 52254029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 179 - 407
Target Start/End: Original strand, 28734596 - 28734824
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||| |||||||||||||||||||||||| |||||||||||         ||||||||||  ||| |||||||| || |||| ||||||| |||||    
T  28734596 ttgtttcataatgaatgtcactttcagtttccattgcaataataaaaaaaaaaattcaattgtacccttcaattaatactatgttacactacttgcaaag 28734695  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||||| |      
T  28734696 tattattttttctttaatgaaaaacaaaccaataattgattaggataatttgataaaattattatgacatttgactactttattcaattctttaatatat 28734795  T
Q  379 gtccagttggctaaagcgacactcatttt 407  Q
    || || |||| ||||||||||||||||||    
T  28734796 gtgcaattggttaaagcgacactcatttt 28734824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 50623081 - 50623325
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||| |||| | ||| ||||| |||||||||||||||||||||| ||||||| ||  ||| ||||||||| | |||| |||||||| ||||    
T  50623081 ttgttttaaaatgtatgttatttttagttttcaatgcaataataactttttcttttcaattatacccttcaattaatataatgttacactacttctaaag 50623180  T
Q  279 tattatttt-ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttg 377  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| |||||||||| ||||  |||| ||||| ||    
T  50623181 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaattgatatgacatttgactactctatttcattccttaatatg 50623280  T
Q  378 cgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     ||  | ||| ||||| ||||||||||||||||||||| ||||||    
T  50623281 tgtgtaattgactaaaacgacactcattttaaaacggagggagta 50623325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 186 - 362
Target Start/End: Original strand, 29370608 - 29370784
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattcttt-aattaatattacgttaaactacttccaaagtattat 284  Q
    ||||| ||||||||||||||||| ||||  |||||||||||||||| ||||||||||| |||| |||||||| ||  ||| |||||||||||||||||||    
T  29370608 aaaataaatgtcactttcagttttcaatataataataactttttcttttcaattgtatcctttcaattaatactaaattacactacttccaaagtattat 29370707  T
Q  285 tttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttatt 362  Q
    ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  29370708 ttt-tctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactactttatt 29370784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 225 - 415
Target Start/End: Original strand, 42605616 - 42605806
Alignment:
Q  225 tttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggct 324  Q
    ||||||| ||||||||||  ||| ||||||||||| |||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| | |    
T  42605616 tttttcttttcaattgtacccttcaattaatattatgttacattactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaagat 42605715  T
Q  325 aatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||||||||||||| |||||| |||||||| ||||||  |||||||||| || || || ||| ||||| |||| ||||||||||||||||    
T  42605716 aatttggtaaaattgctatgacatttgactattttattttattctttaatctgtgtgcaattgactaaaacgacgctcattttaaaacgga 42605806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 10573313 - 10573156
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||  ||| |||||||| ||  |  || |||||||||||    
T  10573313 ttgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacaa-tacttccaaag 10573215  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  10573214 tattattttttcattaatgaaaatcaaatcaatagttgattaggataatttggtaaaat 10573156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 256 - 422
Target Start/End: Original strand, 39984892 - 39985058
Alignment:
Q  256 attacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgacta 355  Q
    |||| |||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  ||||||| |||||||| |||||| ||||||||    
T  39984892 attatgttacactacttccaaagtataattgtttctttaatgaaaaacaaatcaatagttgattagaataatttgataaaattgctatgacatttgacta 39984991  T
Q  356 ctttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     |||||||||||| ||||| ||  | || ||||||||||||||||||||||| ||||||| ||||||    
T  39984992 ttttattcaattccttaatatgtatgcaattggctaaagcgacactcattttgaaacggagggagta 39985058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 179 - 419
Target Start/End: Complemental strand, 40011033 - 40010791
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactt-tttctcttcaattgtattctttaattaatattacgttaaactacttccaaa 277  Q
    |||||| ||||||||||| ||||||||||||||||||||||| ||||| ||| | ||||||||||  ||| |||||||| || |||| ||| |||  |||    
T  40011033 ttgttttaaaatgaatgttactttcagtttccaatgcaataacaacttcttttttttcaattgtacccttcaattaatactatgttacactgctttaaaa 40010934  T
Q  278 gtattatttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaattt 376  Q
     ||||||||||| |||||||  ||||||||||||||||| |||||| |||||| ||||||||| |||||| |||||||||||||||| |||| ||||| |    
T  40010933 atattatttttttctttaatataaaacaaatcaatagttaattaggataattttgtaaaattgctatgacatttgactactttattccattccttaatat 40010834  T
Q  377 gcgtccagttggctaaagcgacactcattttaaaacggatgga 419  Q
    | ||  | | | ||||| ||||||||||||| |||||||||||    
T  40010833 gtgtgtaatggactaaaacgacactcattttgaaacggatgga 40010791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 19451370 - 19451206
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgt------taaactactt 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||||  |  |      || |||||||    
T  19451370 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaataccatatagtatatacactactt 19451271  T
Q  273 ccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  19451270 ccaaagtattattttttctttaatgaaaaacaaaccaataattgattaggctattttggtaaaat 19451206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 50203039 - 50203229
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  50203039 tccgttttaaaatgagtgtcgttttagc--aaaaaaattgttttaaaatgaatgtcactttcagt--ccaatgcaataataactttttcttttcaattgt 50203134  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |  ||| |||||||||||  | | | |||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  50203135 acccttcaattaatattatat-acattacttcaaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtgaaat 50203229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 30261257 - 30261414
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||  ||| |||||||| ||   || | ||||| |||||    
T  30261257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttcttttcaattgtacccttcaattaatacta-tatacattactttcaaag 30261355  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||    
T  30261356 tattattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaat 30261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 47817736 - 47817894
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||||||| ||||||||||  ||| |||||||| ||   || |||||||||||||    
T  47817736 ttgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttcttttcaattgtacccttcaattaatacta-tatacactacttccaaag 47817834  T
Q  279 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||    
T  47817835 tattatttttttctttaatgaaaaacaaaccaatagttgattatgataaattggtaaaat 47817894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 187 - 337
Target Start/End: Original strand, 45839643 - 45839793
Alignment:
Q  187 aaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattt 286  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||   || |||||||||||  | | | |||||||||||||||||||    
T  45839643 aaatgaatgtcactttcagtttctaatacaataataactttttattttcaattgtaccattcaattaatattatat-acattacttccaaagtattattt 45839741  T
Q  287 t-ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    | |||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  45839742 ttttctttaatgaaaaacaaatcaattgttgattaggataatttggtaaaat 45839793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 145 - 337
Target Start/End: Original strand, 41496169 - 41496360
Alignment:
Q  145 gttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtatt 244  Q
    |||| |||||||||||| ||||||||        |||||||||||| ||| ||||||||||||| |||| ||||||||||||||||| |||||||||| |    
T  41496169 gtttcaaaatgagtgtcattttagctaacaaaaattgtttcaaaataaatctcactttcagttttcaatacaataataactttttcttttcaattgtact 41496268  T
Q  245 ctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||| |||||||||||   || |||||| ||||| |||||||| ||||| ||| |||||||||  |||||||||||||| ||||||||| ||||    
T  41496269 cttcaattaatatta-tatacactactcccaaaatattatttattcttcaataaaaaacaaacaaatagttgattaggataatttggtgaaat 41496360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 134 - 338
Target Start/End: Complemental strand, 46392264 - 46392063
Alignment:
Q  134 ctattccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctct 233  Q
    |||||||||||||||||||||||||||||||||||||        || ||| ||||||  ||||||||||| ||| ||| |||||||||| ||||||| |    
T  46392264 ctattccttccgttttaaaatgagtgtcgttttagctaaaaaaa-ttattttaaaatggctgtcactttcacttttcaaagcaataataattttttcttt 46392166  T
Q  234 tcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggta 333  Q
    |||||| ||   || |||||||||    ||| |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||||| ||||||||||    
T  46392165 tcaattatacctttcaattaatatat--ttacactacttccaaagtattattttttatttaatagaaaacaaaccaatagttgattaggataatttggta 46392068  T
Q  334 aaatt 338  Q
    |||||    
T  46392067 aaatt 46392063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 8971040 - 8971198
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||||  |||||||||||||| ||||| |||||||| ||||||| |||||||||| |||| |||||||| ||   || |||||||||||||    
T  8971040 ttgttttaaaatgaccgtcactttcagttttcaatgaaataataattttttcttttcaattgtactcttcaattaataata-tatacactacttccaaag 8971138  T
Q  279 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||| ||||||||||||||||||||||| |||||||| |||| | ||||||||||||||    
T  8971139 tattatttttttctttaatgaaaaacaaaccaatagtttattaagataatttggtaaaat 8971198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 179 - 362
Target Start/End: Original strand, 40837128 - 40837311
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattc-tttaattaatattacgttaaactacttccaaa 277  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| |||  |  | |||||||| || |||| ||||||||||||    
T  40837128 ttgtttcaaaatgaatgtcactttcattttccaatgcaataataacttttt-ttttcaatcgtacccgatcaattaatactatgttacactacttccaaa 40837226  T
Q  278 --gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttatt 362  Q
       |||| ||||||||||||||||||||||||||||   |||||| | ||||||||||||| ||   |||| |||||||||||||||    
T  40837227 ttttatttttttttctttaatgaaaaacaaatcaatgagtgattaagataatttggtaaaactg--ctgacatttgactactttatt 40837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 143 - 337
Target Start/End: Original strand, 11364188 - 11364381
Alignment:
Q  143 ccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||| |||||||||||||||||| ||        |||||| || |||||||  |||||| ||||  |||| |||||||||||||||| ||||||||||    
T  11364188 ccgtttcaaaatgagtgtcgttttaactaaaaagaattgttttaagatgaatgatactttcggtttttaatgaaataataactttttcttttcaattgta 11364287  T
Q  243 ttctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
      ||| |||||||||||  | | |||||||||||||||||||||| |||| ||||||||||||| ||||| || |||| | ||||||||||||||    
T  11364288 cccttcaattaatattatat-atactacttccaaagtattattttctcttcaatgaaaaacaaaccaataattaattaagataatttggtaaaat 11364381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 34413706 - 34413548
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||||||||   || |||||||||||   || |||||||| |||     
T  34413706 ttgtttcaaaataaatgtcactttcaatttcaaatgcaataataactttttattttcaattgtaccattcaattaatatta-tatacactacttctaaaa 34413608  T
Q  279 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||| |||||||||||||||||||  || ||||||||||||||  |||||| |||||||    
T  34413607 tattatttttttctttaatgaaaaaagaaccaatagttgattagcataatttagtaaaat 34413548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 4505298 - 4505398
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||| ||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4505298 tccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 4505397  T
Q  242 a 242  Q
    |    
T  4505398 a 4505398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 186 - 333
Target Start/End: Complemental strand, 6991413 - 6991268
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||||| |||||| |||  ||| | |||||||||  | | |||| || ||||||||||||    
T  6991413 aaaatgaatgtcactttcagttttcaatacaataataattttttcttttcaat-gtacccttcagttaatattatat-acactattttcaaagtattatt 6991316  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggta 333  Q
    ||||||||||| ||||| ||| |||||||||| |||| ||||||||||    
T  6991315 ttttctttaataaaaaataaaccaatagttgactaggataatttggta 6991268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 37624554 - 37624631
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||    
T  37624554 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaata 37624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 186 - 337
Target Start/End: Original strand, 52162111 - 52162259
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||||||||||| ||| ||| |||||||||| ||||| |  | |||| ||  ||| |||||||| ||  | | |||| |||||||||||||||    
T  52162111 aaaatgaatgtcactttcaattttcaacgcaataataatttttttt--tgaattatacccttcaattaatactaaat-acactagttccaaagtattatt 52162207  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||| ||||| ||||||| | ||||||||||||||    
T  52162208 ttttctttaatgaaaaacaaaccaatatttgattaagataatttggtaaaat 52162259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 52915701 - 52915637
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtat 243  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  52915701 ttgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttcttttcaattgtat 52915637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 146 - 288
Target Start/End: Original strand, 25231140 - 25231281
Alignment:
Q  146 ttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattc 245  Q
    ||||||||||||||||| ||||||         |||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||  |    
T  25231140 ttttaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttctattgtaccc 25231239  T
Q  246 tttaattaatattacgttaaactacttccaaagtattattttt 288  Q
    | ||||||||| |  | || |||||||||||||||||| ||||    
T  25231240 tataattaatactttg-tacactacttccaaagtattactttt 25231281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 39982106 - 39982164
Alignment:
Q  184 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39982106 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgta 39982164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 30780123 - 30780021
Alignment:
Q  235 caattgtattctttaattaatattacgttaa-actacttccaaagtattatttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggt 332  Q
    |||||||| |||| |||||||||||  | || ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||    
T  30780123 caattgtactcttcaattaatatta--taaagactactttcaaagtattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttagt 30780026  T
Q  333 aaaat 337  Q
    |||||    
T  30780025 aaaat 30780021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 337
Target Start/End: Original strand, 56460082 - 56460241
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaatta--atattacgttaaactacttccaaa 277  Q
    ||||| |||||||||||||||||||| || |||||||||| ||||||||||| || |||| ||| ||| |||||  ||||||  | | ||||||||||||    
T  56460082 tgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttctttttaattatatccttcaattataatattatat-acactacttccaaa 56460180  T
Q  278 gtattattttttc-tttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
     |||||||||||| ||||||||||||||||   |||| |||||||  |||||| |||||||    
T  56460181 atattattttttcttttaatgaaaaacaaacttatagctgattagaataatttagtaaaat 56460241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 34124443 - 34124527
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||||||||||||| ||||||||||||||||||||  ||||| || || || ||||||||||||||||||||||| |||||||    
T  34124443 gtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacgga 34124527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 186 - 337
Target Start/End: Complemental strand, 44868397 - 44868253
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||||||||||| ||| ||||      |||||||||||| ||||||||||   || |||||||| ||  | | | |||||||||| |||||||    
T  44868397 aaaatgaatgtcactttcaattttcaat------ataactttttcttttcaattgtaccattcaattaataatatat-acattacttccaaaatattatt 44868305  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    || ||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  44868304 ttatctttaatggaaaacaaatcaatagttgattaggacaatttggtaaaat 44868253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 186 - 337
Target Start/End: Complemental strand, 620330 - 620177
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataacttttt-ctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattat 284  Q
    ||||||||| ||| ||| |||||| ||||||||||||| ||||| || ||||||||||  ||| |||||||| | |  || | |||||||||||||||||    
T  620330 aaaatgaatatcagtttaagtttctaatgcaataataatttttttcttttcaattgtacccttcaattaatact-ctatacattacttccaaagtattat 620232  T
Q  285 tttttc--tttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||   ||||| ||||||||||||||||||||||||   ||||||||||||||    
T  620231 ttttttcttttaaagaaaaacaaatcaatagttgattaaaataatttggtaaaat 620177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 19282414 - 19282323
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| |||||||||||||||| |||| |||||  | || || |||||||||||||| ||||||||||||||||| |||||    
T  19282414 gtaaaattgttatgacatttgactactttattccattccttaatccgtgtgcaattggctaaagcgacgctcattttaaaacggatcgagta 19282323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 47321293 - 47321384
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| |||||||| |||||||||||| ||||| || || || ||||||||| ||||||||||||||||||||| ||||||    
T  47321293 gtaaaattgctatgacatttgactattttattcaattccttaatctgtgtgcaattggctaaaacgacactcattttaaaacggagggagta 47321384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 186 - 256
Target Start/End: Complemental strand, 21864535 - 21864465
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||    
T  21864535 aaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaata 21864465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 186 - 256
Target Start/End: Complemental strand, 21920396 - 21920326
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||    
T  21920396 aaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaata 21920326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 7906152 - 7906092
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  7906152 tttcaaaatgaatgtcactttcagtttccggtgcaataataactttttcttttcaattgta 7906092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 24259759 - 24259850
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| |||||||||||||||  |||| ||||| |  || || |||| |||||||||||||||||||||||||||| ||||    
T  24259759 gtaaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattggataaagcgacactcattttaaaacggatgaagta 24259850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 24157183 - 24157260
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    |||||||||||| ||||||| ||| |||||| ||||||||||||| ||||||| || |||||||| ||||||||||||    
T  24157183 ttgtttcaaaataaatgtcaattttagtttctaatgcaataataattttttctttttaattgtatcctttaattaata 24157260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 331 - 424
Target Start/End: Original strand, 28116393 - 28116486
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    ||||||||| |||||| |||||||||||||||| |||| |||||  | || || |||| ||||| |||||||||||| ||||||||||||||||    
T  28116393 gtaaaattgctatgacatttgactactttattccattccttaatccgtgtgcaattggttaaagtgacactcattttgaaacggatggagtact 28116486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 44060972 - 44061069
Alignment:
Q  145 gttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||||||||||| ||        |||||| | ||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||    
T  44060972 gttttaaaatgagtgtcgttttaactataaaaatttgttttataatgaatgtcactttcattttctaatacaataataactttttcttttcaattgta 44061069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 332 - 422
Target Start/End: Original strand, 31941707 - 31941794
Alignment:
Q  332 taaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||| |||||| |||||||||||||||| |||||   |||||| | || ||||||||||||||||||||||| ||||||| ||||||    
T  31941707 taaaattgctatgacatttgactactttattccattct---atttgcatgcaattggctaaagcgacactcattttgaaacggagggagta 31941794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 51733653 - 51733601
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttct 231  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  51733653 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttct 51733601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 22220518 - 22220455
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||| ||||||| ||||| ||| |||||||||||||||||||||| ||||||||||    
T  22220518 ttgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttcttttcaattgta 22220455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 31917954 - 31918065
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgt-taaactacttccaaa 277  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||  ||||||| ||||||| ||  ||| |||||||  ||| | || | ||||||||||    
T  31917954 ttgttttaaaatgaatttcactttcagcttccaatgcaataatagttttttcttttcaattttacccttcaattaattatacatatatattacttccaaa 31918053  T
Q  278 gtattatttttt 289  Q
    ||||||||||||    
T  31918054 gtattatttttt 31918065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 305
Target Start/End: Complemental strand, 25123872 - 25123760
Alignment:
Q  192 aatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttct 291  Q
    ||||||| ||||||||| |||| ||||||||| ||||||| |||| |||||  ||| |||||||| ||  | | || ||||||||| |||||||||||||    
T  25123872 aatgtcattttcagttttcaatacaataataattttttcttttcagttgtacccttcaattaatactatat-acacgacttccaaaatattattttttct 25123774  T
Q  292 ttaatgaaaaacaa 305  Q
    |||| |||||||||    
T  25123773 ttaaagaaaaacaa 25123760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 27943705 - 27943624
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactt-tttctcttcaattgtattctttaattaatatta 259  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| ||| | ||||||| ||  ||| |||||||||||    
T  27943705 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttcttttttttcaattatacccttcaattaatatta 27943624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 17499721 - 17499637
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||||||||||||| |||||||| ||||||  |||| ||||| || || || ||| ||||| |||||||||||||||||||||    
T  17499721 gtaaaattgttatgacatttgactattttatttcattcattaatctgtgtgcaattgactaaaacgacactcattttaaaacgga 17499637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 45889711 - 45889802
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| ||| || |||||||||||||||  |||| ||||| || || || ||||||||| ||||||||||||| |||||||| |||||    
T  45889711 gtaaaattgctataacatttgactactttatttcattccttaatatgtgtgcaattggctaaaacgacactcattttgaaacggatagagta 45889802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 55126645 - 55126736
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| |||||||||||||||  |||| |||||    || || ||||||||| ||||| ||||||||||||||||||||||    
T  55126645 gtaaaattgctatgacatttgactactttatttcattccttaatcaatgtgcaattggctaaaacgacattcattttaaaacggatggagta 55126736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 425
Target Start/End: Original strand, 54233964 - 54234058
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    ||||||||| |||||  ||||| |||||||||| |||  ||||||||  | || ||||||||||||||||||||||| ||||||| ||| |||||    
T  54233964 gtaaaattgatatgatatttgagtactttattccatttcttaatttgtatgcaattggctaaagcgacactcattttgaaacggagggaatactt 54234058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 51737299 - 51737234
Alignment:
Q  360 attcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    |||| |||| |||||||| || |||||| ||||||||||||||||||||||| ||| |||||||||    
T  51737299 attctattccttaatttgtgtacagttgactaaagcgacactcattttaaaatggagggagtactt 51737234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 33033076 - 33033120
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataa 223  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  33033076 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataa 33033120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 44061073 - 44061149
Alignment:
Q  262 ttaaactacttccaaagtattattttttc-tttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||| ||||||| |||| |||||||||||  |||||||||||||||| ||||||||||||| | |||||| |||||||    
T  44061073 ttacactacttgcaaaatattatttttttatttaatgaaaaacaaaccaatagttgattatgataatttagtaaaat 44061149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 47458544 - 47458388
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt-ctcttcaattgtattctttaattaatattacgttaaactacttccaaa 277  Q
    |||||| ||||||||||| ||| | |||||| ||||||||||||  ||||| || ||||||||||   || |||||||| ||  | | | |||||  |||    
T  47458544 ttgttttaaaatgaatgtaactcttagtttc-aatgcaataatattttttttcttttcaattgtaccattcaattaatactatat-acattacttttaaa 47458447  T
Q  278 gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||| |||||| ||||||||||   ||||||||||||| ||||||||||||||    
T  47458446 gtattattttt-ctttaacgaaaaacaaacatatagttgattaggataatttggtaaaat 47458388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 50621341 - 50621294
Alignment:
Q  184 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttct 231  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  50621341 tcaaaataaatgtcactttaagttttcaatgcaataataactttttct 50621294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 332 - 415
Target Start/End: Complemental strand, 51434260 - 51434177
Alignment:
Q  332 taaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||||||||||||  |||||||||||||||| |||| ||||| |   | || |||| |||||||||| |||||||||||||||    
T  51434260 taaaattgttatgaaatttgactactttattccattccttaatatatatgcaattggttaaagcgacattcattttaaaacgga 51434177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 422
Target Start/End: Complemental strand, 56556256 - 56556194
Alignment:
Q  360 attcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| ||||| || || || |||| |||||||||||||||||||||||||| ||||||    
T  56556256 attcaattccttaatctgtgtgcaattggttaaagcgacactcattttaaaacggagggagta 56556194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 22212541 - 22212578
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| |||||||||||||||||||||    
T  22212541 ttggctaaagcgacacccattttaaaacggatggagta 22212578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 425
Target Start/End: Complemental strand, 50203066 - 50203029
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagtactt 425  Q
    |||||| |||||||||||||||||||||||||||||||    
T  50203066 gctaaaacgacactcattttaaaacggatggagtactt 50203029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 413
Target Start/End: Complemental strand, 4408181 - 4408099
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacg 413  Q
    ||||||||||||||||  ||||||||||||||  |||| |||||||  || || || | |||||||||| ||||||| |||||    
T  4408181 gtaaaattgttatgacacttgactactttatttcattccttaatttatgtgcaattagttaaagcgacattcattttgaaacg 4408099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 38510379 - 38510341
Alignment:
Q  204 agtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  38510379 agttttcaatgcaataataactttttcttttcaattgta 38510341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 39982056 - 39982090
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttagc 169  Q
    |||||| ||||||||||||||||||||||||||||    
T  39982056 tattccctccgttttaaaatgagtgtcgttttagc 39982090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Complemental strand, 4505325 - 4505288
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagtactt 425  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  4505325 gctaaagcgacactcattttgaaacggagggagtactt 4505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 19903257 - 19903204
Alignment:
Q  284 ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||| |||||||| |||  | |||||| |||||||    
T  19903257 ttttttctttaatgaaaaacaaaccaatagtttattcagataattttgtaaaat 19903204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 28116233 - 28116196
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  28116233 ttggctaaagcgacactcattttgaaacggattgagta 28116196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 424
Target Start/End: Original strand, 29840201 - 29840294
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||| ||||||| ||  ||| || || |||| |||| |||||||| || || |||| |||| ||||||||||||| ||||||| ||||||||    
T  29840201 gtaaaagtgttatgtctaatgattatttcattccattccttaatttgtgtgcaattgggtaaaacgacactcattttgaaacggagggagtact 29840294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 420
Target Start/End: Complemental strand, 34534097 - 34534008
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggag 420  Q
    ||||||||| |||||| ||||| ||||||||||||||| ||||| || || || || ||||||  |||||| ||||| ||| ||| ||||    
T  34534097 gtaaaattgctatgacatttgattactttattcaattccttaatctgagtgcaattagctaaaatgacacttattttgaaagggaaggag 34534008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 37624753 - 37624786
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| ||||||||||||||||||||||||||||    
T  37624753 ctaaaacgacactcattttaaaacggatggagta 37624786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 38510205 - 38510172
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| ||||||||||||||||||||||||||||    
T  38510205 ctaaaacgacactcattttaaaacggatggagta 38510172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 52915708 - 52915745
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||| || |||||||||||    
T  52915708 ttggctaaagcgacactcattttgaatcggatggagta 52915745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 334 - 422
Target Start/End: Original strand, 6462165 - 6462253
Alignment:
Q  334 aaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||| |||||  |||||||||||||||   ||  ||||| || || || ||||||||| |||| |||||||| ||||||||||||||    
T  6462165 aaattgctatgaaatttgactactttattacttttcttaatctgtgtgcaattggctaaaacgaccctcattttgaaacggatggagta 6462253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 422
Target Start/End: Original strand, 19282581 - 19282613
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||| ||||||    
T  19282581 taaagcgacactcattttaaaacggaaggagta 19282613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 422
Target Start/End: Complemental strand, 42672055 - 42672023
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||| ||||    
T  42672055 taaagcgacactcattttaaaacggatgaagta 42672023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 422
Target Start/End: Original strand, 45043759 - 45043791
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||| ||||||||||||||||||||||||||||    
T  45043759 taaaacgacactcattttaaaacggatggagta 45043791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 51434426 - 51434462
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagtacttg 426  Q
    ||||||||||||||||||||||||||  |||||||||    
T  51434426 taaagcgacactcattttaaaacggagagagtacttg 51434462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 54092186 - 54092154
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgtttta 167  Q
    |||| ||||||||||||||||||||||||||||    
T  54092186 tatttcttccgttttaaaatgagtgtcgtttta 54092154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 388 - 424
Target Start/End: Original strand, 56556421 - 56556457
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagtact 424  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  56556421 gctaaagtgacactcattttaaaacagatggagtact 56556457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 2e-85; HSPs: 107)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 138 - 422
Target Start/End: Original strand, 12342050 - 12342334
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaa 237  Q
    ||||||||||| |||||||||||||||||| |         ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  12342050 tccttccgtttcaaaatgagtgtcgttttaaccaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaa 12342149  T
Q  238 ttgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||  ||| |||||||| || |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12342150 ttgtacccttcaattaatactatgttacactacttccaaaatattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 12342249  T
Q  338 tgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||||||||||||  |||| |||||    || || ||||||||| ||||||||||||||||||||| ||||||    
T  12342250 tgttatgacatttgactactttatttcattccttaataaatgtgcaattggctaaaacgacactcattttaaaacggagggagta 12342334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 135 - 422
Target Start/End: Complemental strand, 25383682 - 25383397
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctctt 234  Q
    |||||| ||||||||||||| |||||| ||||||||        |||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||    
T  25383682 tattccatccgttttaaaat-agtgtcattttagctaaaaaaaattgttttaaaatgaatgttattttcagtttccaatgcaataataactttttctttt 25383584  T
Q  235 caattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaa 334  Q
    ||||||||  ||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||||||||| | |||||||||||    
T  25383583 caattgtac-cttcaattaatattatgttacactactttcaaagtattactatttctttaatgaaaaacaaatcaatagttgattaagataatttggtaa 25383485  T
Q  335 aattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| |||||  |||||||||||||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  25383484 aattgctatgatatttgactactttattccattccttaatttgcgtgcaattggctaaagcgacactcattttaaaacggatggagta 25383397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 142 - 425
Target Start/End: Original strand, 4132985 - 4133266
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||||||||||         ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  4132985 tccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgt 4133084  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |  ||||| || |||| ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||| |    
T  4133085 acccttca--taatactatgttacactacttccaaagtattattttttccttaaagaaaaacaaaccaatagttgattaggataatttggtaaaattgct 4133182  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    ||||| |||||||||||||||| |||| ||||| || || || ||||||||||||||||||||||| ||||||| |||||||||    
T  4133183 atgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagtactt 4133266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 441386 - 441143
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||  ||| |||||||| || |||| || ||||||||||    
T  441386 ttgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacaccacttccaaag 441287  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| |||||| |||||||||||||||| |||| ||||||||     
T  441286 tattattttttctttaatgaaaaacaaaccaatggttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatttgt 441187  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||||||||| ||||||||||||| ||||||| ||||||    
T  441186 gtgcaattggctaaaacgacactcattttgaaacggagggagta 441143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 29396835 - 29396592
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||  ||| ||||||||||| |||| |||||||||||||    
T  29396835 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattatacccttcaattaatattatgttacactacttccaaag 29396736  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||| |||||||||||||||  |||| ||||| ||     
T  29396735 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgacatttgactactttatttcattccttaatctgt 29396636  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||||||||| ||||||||||||| |||| || ||||||    
T  29396635 gtgcaattggctaaaacgacactcattttgaaacagagggagta 29396592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 29808810 - 29809054
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||||||||||| |||||| |||  ||| | ||||||||| |||| |||||||||||||    
T  29808810 ttgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttcttttcaatcgtacccttcacttaatattatgttacactacttccaaag 29808909  T
Q  279 tattatttt-ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttg 377  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||| |||||||||||||||  |||| ||||||||    
T  29808910 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgacatttgactactttatttcattccttaatttg 29809009  T
Q  378 cgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     || || ||||||||||||||||||||||| |||| |||||||||    
T  29809010 tgtgcaattggctaaagcgacactcattttgaaacagatggagta 29809054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 181 - 422
Target Start/End: Original strand, 30855105 - 30855346
Alignment:
Q  181 gtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagta 280  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||   ||||||||||| || |||| ||||||||||||  |    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataa-tttttcttttcaattgtaccatttaattaatactatgttacactacttccaaaaca 30855203  T
Q  281 ttatttt-ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcg 379  Q
    ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| ||||| ||||    
T  30855204 ttatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttaagacatttgactattttattcaattccttaatatgcg 30855303  T
Q  380 tccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    | || |||| |||||||||||||||||| ||||||| ||||||    
T  30855304 tgcaattggttaaagcgacactcattttgaaacggagggagta 30855346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 179 - 407
Target Start/End: Original strand, 38926604 - 38926832
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| || | ||||||||||  ||| |||||||| || |||| |||||||||||||    
T  38926604 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttctttttttcaattgtacccttcaattaatactatgttacactacttccaaag 38926703  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| |||||||||||||||  |||| ||||| ||     
T  38926704 tattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaattgttatgacatttgactactttatttcattcattaatatgt 38926803  T
Q  379 gtccagttggctaaagcgacactcatttt 407  Q
    || || ||| |||||||||||||||||||    
T  38926804 gtgcaattgactaaagcgacactcatttt 38926832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 142 - 422
Target Start/End: Complemental strand, 16807708 - 16807429
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||  |        |||||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  16807708 tccgttttaaaatgagtgtcgttttaa-taaaaaaaattgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgt 16807610  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| ||||||||  | | || || |||||||||| ||||| |||||||||||||||||||||  |||||||||||||  ||||||| ||||||||||    
T  16807609 acccttcaattaatacaatggtacaccacttccaaagaattatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaattgtt 16807510  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| |||||||||||||||| |||| ||||| || || || ||||||||||||||||||||||||||||||| ||||||    
T  16807509 atgacatttgactactttattccattcattaatatgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 16807429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 142 - 422
Target Start/End: Complemental strand, 16846989 - 16846710
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||  |        |||||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  16846989 tccgttttaaaatgagtgtcgttttaa-taaaaaaaattgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgt 16846891  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| ||||||||  | | || || |||||||||| ||||| |||||||||||||||||||||  |||||||||||||  ||||||| ||||||||||    
T  16846890 acccttcaattaatacaatggtacaccacttccaaagaattatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaattgtt 16846791  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| |||||||||||||||| |||| ||||| || || || ||||||||||||||||||||||||||||||| ||||||    
T  16846790 atgacatttgactactttattccattcattaatatgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 16846710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 13561992 - 13562234
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||| ||||||| ||| |||| |||||||||||||    
T  13561992 ttgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttcttttcaattgtacccttcaattaatgttatgttacactacttccaaag 13562091  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||||| |||||||||||||||| |||| |||||||||| |||||| ||||||||  |||||| |||||||||||| ||| |||| ||||| ||     
T  13562092 tattattttttatttaatgaaaaacaaaccaatggttgattaggataatttagtaaaatt-atatgacatttgactactttcttccattccttaatatgt 13562190  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||| | ||| ||||||||||||||||| ||| ||||||    
T  13562191 gtgcaattgacaaaaacgacactcattttaaaatggagggagta 13562234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 142 - 415
Target Start/End: Complemental strand, 32228202 - 32227930
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         |||||| |||||||||||||||||  ||||  ||||||||||||||||||||| |||| ||||    
T  32228202 tccgttttaaaatgagtgtcgttttagc-aaaataaattgttttaaaatgaatgtcacttttggttttaaatgcaataataactttttcttttcagttgt 32228104  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| || |||| | ||||| ||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  32228103 acccttcaattaatactatgttacaatactttcaaagtattattttttctttaatgaaaaacaacccaatagttgattaggataatttggtaaaattgtt 32228004  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||| ||||| |||||||||  |||| |||||||| || || |||||||||||||  || ||||| |||||||    
T  32228003 atgacatttgaatactttatttcattccttaatttgtgtgcaattggctaaagcgatgcttattttgaaacgga 32227930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 6220596 - 6220376
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    |||||||||||| ||||||||||||| ||        |||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||    
T  6220596 tccgttttaaaacgagtgtcgttttaactcaaaaaaattgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaactgt 6220497  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |   || ||||||||||| |||| |||||||||||| ||||||||| | |||||||||||||||| ||||||||||||||| ||||||| |||||||| |    
T  6220496 acctttcaattaatattatgttacactacttccaaattattattttctttttaatgaaaaacaaaccaatagttgattaggataatttgataaaattgct 6220397  T
Q  342 atgacttttgactactttatt 362  Q
    ||||| |||||||||||||||    
T  6220396 atgacatttgactactttatt 6220376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 182 - 338
Target Start/End: Complemental strand, 45082052 - 45081896
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtat 281  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||| ||||||||||| |||| ||||||||||||| ||    
T  45082052 tttcacaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacactacttccaaagcat 45081953  T
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaatt 338  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  45081952 tattttttctttaatgaaaaacaaaacaatagttgattaggataatttggtaaaatt 45081896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 8774054 - 8774293
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||| || |||| |||||||||| ||||||||||| |  || |||||||||| |||| ||||||||  | |||| |||||||||||||    
T  8774054 ttgtttaaaaatgaatatcgcttttagtttccaatacaataataactgt--cttttcaattgtactcttcaattaatac-atgttacactacttccaaag 8774150  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  |||| ||||| ||     
T  8774151 tattatttt-tctttaatgaaaaataaaccaatagttgattaggataatttggtaaaattgttatgacatttgactattttattacattccttaatatgt 8774249  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||| ||||| | ||||||||||||||||||||||||||    
T  8774250 gtgcaattgactaaaacaacactcattttaaaacggatggagta 8774293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 142 - 422
Target Start/End: Complemental strand, 12394113 - 12393831
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| |||||||||||||||||||          |||||||||||||||||| |||||||||||| ||||||||||||||||||| | || ||||||    
T  12394113 tccgtttcaaaatgagtgtcgttttaggcaaaaaaaattgtttcaaaatgaatgttactttcagtttctaatgcaataataactttttatttttaattgt 12394014  T
Q  242 attctttaattaatattacgttaaac--tacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattg 339  Q
    |  ||| ||||||||||| |||| ||  || || ||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  12394013 acccttcaattaatattatgttatacactattttcaaagtaatattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattg 12393914  T
Q  340 ttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     |||||| ||| |||||||||||  ||| |||||| || || || | || ||||||| |||| ||||||||| ||| ||||||    
T  12393913 ctatgacatttaactactttatttcattttttaatatgtgtgcaatcggttaaagcggcactgattttaaaatggagggagta 12393831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 8789581 - 8789342
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||| || |||| |||||||||| ||||||||||| |  || |||||||||| |||| ||||||||  | |||| |||||||||||||    
T  8789581 ttgttttaaaatgaatatcgcttttagtttccaatacaataataactgt--cttttcaattgtactcttcaattaatac-atgttacactacttccaaag 8789485  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  |||| ||||| ||     
T  8789484 tattattttt-ctttaatgaaaaataaaccaatagttgattaggataatttggtaaaattgttatgacatttgactattttatttcattccttaatatgt 8789386  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||| ||||| | ||||||||||| ||||||||||||||    
T  8789385 gtgcaattgtctaaaacaacactcatttttaaacggatggagta 8789342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 192 - 415
Target Start/End: Original strand, 42753756 - 42753981
Alignment:
Q  192 aatgtcactttcagtttccaatgcaataataactttttc-tcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt-tttt 289  Q
    ||||||||||||||||| |||||| |||||||||||||  | || |||||||||||| |||||||  || |||| ||||||||||||||| |||| ||||    
T  42753756 aatgtcactttcagttttcaatgcgataataacttttttatttttaattgtattcttcaattaatgctatgttacactacttccaaagtactattatttt 42753855  T
Q  290 ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggc 389  Q
     ||||| |||||||||||||||||||||||||| | |||||||||||||| |||||| |||| ||||||||||  |||||||||| || ||  | |||||    
T  42753856 ttttaaagaaaaacaaatcaatagttgattaggatgatttggtaaaattgctatgacatttgtctactttatttcattctttaatatgtgtgtaattggc 42753955  T
Q  390 taaagcgacactcattttaaaacgga 415  Q
    |||||||||| ||||||| |||||||    
T  42753956 taaagcgacagtcattttgaaacgga 42753981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 233 - 422
Target Start/End: Original strand, 42743081 - 42743267
Alignment:
Q  233 ttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggt 332  Q
    ||||||||||| ||| ||||||||||| |||| ||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  42743081 ttcaattgtatccttcaattaatattatgttacactactttcaaagtatt-ttttttctttaataaaaaacaaatcaataattgattaggataatttggt 42743179  T
Q  333 aaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||| |||||| |||||||||||||||  |||| ||||| |  || || ||||||||||||||||||||||||||| ||| ||||||    
T  42743180 aaaattgctatgacatttgactactttatttcattccttaatct--gtgcaattggctaaagcgacactcattttaaaatggagggagta 42743267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 186 - 419
Target Start/End: Original strand, 42004896 - 42005128
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||||| ||| | |||||||||||||||||| ||||| | ||||||||||  ||| ||||||||||| |||| ||||||||||||||||||||    
T  42004896 aaaatgaatgtcatttttaatttccaatgcaataataattttttattttcaattgtacccttcaattaatattatgttacactacttccaaagtattatt 42004995  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagt 385  Q
     ||| |||||| |||||||||  |||||||||||||| ||||||||| |||||| ||   | ||||||||||||||||||||| ||||| |  ||  | |    
T  42004996 gtttttttaat-aaaaacaaacaaatagttgattaggataatttggtgaaattgctactgcatttgactactttattcaattccttaatatatgtgaaat 42005094  T
Q  386 tggctaaagcgacactcattttaaaacggatgga 419  Q
    | |||||| ||||||| |||||||||||||||||    
T  42005095 tagctaaaacgacacttattttaaaacggatgga 42005128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 179 - 339
Target Start/End: Complemental strand, 4288866 - 4288706
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| |||||||| |   || |||||||| || |||| |||||||||||||    
T  4288866 ttgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttcttttcaattgcaccattcaattaatactatgttacactacttccaaag 4288767  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattg 339  Q
    ||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  4288766 tattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattg 4288706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 187 - 337
Target Start/End: Complemental strand, 18719579 - 18719430
Alignment:
Q  187 aaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattt 286  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||| |||||||| ||  | | |||| || |||||||||||||    
T  18719579 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatat-acactattttcaaagtattattt 18719481  T
Q  287 tttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18719480 tttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 18719430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 179 - 415
Target Start/End: Complemental strand, 36106554 - 36106322
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||||||||||||||   |||||||||||||  ||||||||||| ||||     |  ||| |||||||| || |||| ||||||||||| |    
T  36106554 ttgttttaaaatgaatgtcacttttgttttccaatgcaatgctaactttttcttttcac----acccttcaattaatactatgttacactacttccaatg 36106459  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||||| |||||| ||||||||  ||||||||||||| | |||||||||||||||||||  || |||||||||||||||  |||| ||||| ||     
T  36106458 tattattttttttttaataaaaaacaatccaatagttgattaagataatttggtaaaattgttagaacatttgactactttatttcattccttaatatgt 36106359  T
Q  379 gtccagttggctaaagcgacactcattttaaaacgga 415  Q
     | || || ||||||||||||||||||||||||||||    
T  36106358 atgcaatttgctaaagcgacactcattttaaaacgga 36106322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 37038921 - 37038767
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||||||||| |||||||||||   |||||||| ||||||| ||  ||| |||||||||||  | | ||||||| |||||    
T  37038921 ttgttttaaaatgaatgtcactttcagttttcaatgcaataa---ctttttcttttcaattatacccttcaattaatattatat-acactactttcaaag 37038826  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  37038825 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 37038767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 1423206 - 1423348
Alignment:
Q  196 tcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaa 295  Q
    ||||||||||||| ||||| ||||||||||| |||| ||||||| ||  ||| |||||||| || |||| |||||||||||| |||||||||||||||||    
T  1423206 tcactttcagttttcaatggaataataacttattcttttcaattatacccttcaattaatagtatgttacactacttccaaaatattattttttctttaa 1423305  T
Q  296 tgaaaaacaaatcaatagttgattaggctaatttggtaaaatt 338  Q
    ||| ||||||| ||||||||||||||| |||||||||||||||    
T  1423306 tgagaaacaaaccaatagttgattaggataatttggtaaaatt 1423348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 12566135 - 12565978
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||   || |||||||||||   || ||| |||||||||    
T  12566135 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtaccattcaattaatatta-tatacactgcttccaaag 12566037  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||| ||||| |||||||||||||||||||||||  |||| || | ||||||||||||||    
T  12566036 tataattttgtctttaatgaaaaacaaatcaatgattgagtaagataatttggtaaaat 12565978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 179 - 317
Target Start/End: Original strand, 18579165 - 18579302
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| |  ||| |||||||| ||   || |||||||||||||    
T  18579165 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgcacccttcaattaatacta-tatacactacttccaaag 18579263  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttga 317  Q
    ||| |||||||||||||||||||||||| ||||||||||    
T  18579264 tataattttttctttaatgaaaaacaaaccaatagttga 18579302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 8540036 - 8540194
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||||||| || |||||||||||| ||||||||||||||||||| || |||||||  ||| |||||||||||  ||| |||||||| |||     
T  8540036 ttgttttaaaatgaatgacattttcagtttccagtgcaataataactttttctttttaattgtacccttcaattaatatta-tttacactacttctaaaa 8540134  T
Q  279 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||| |||||||||||||||||||||||  |||||||||||||| ||||||| ||||||    
T  8540135 tattatttttttctttaatgaaaaacaaactaatagttgattaggataatttgataaaat 8540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 261 - 367
Target Start/End: Original strand, 19636588 - 19636694
Alignment:
Q  261 gttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactacttta 360  Q
    |||| |||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  19636588 gttacactattttcaaagtattattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaattgttatgacatttgactacttta 19636687  T
Q  361 ttcaatt 367  Q
    |||||||    
T  19636688 ttcaatt 19636694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 261 - 367
Target Start/End: Original strand, 19835181 - 19835287
Alignment:
Q  261 gttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactacttta 360  Q
    |||| |||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  19835181 gttacactattttcaaagtattattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaattgttatgacatttgactacttta 19835280  T
Q  361 ttcaatt 367  Q
    |||||||    
T  19835281 ttcaatt 19835287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 251 - 368
Target Start/End: Complemental strand, 34546232 - 34546114
Alignment:
Q  251 ttaatattacgttaaactacttccaaagtattatttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttt 349  Q
    |||||| || |||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||    
T  34546232 ttaataatatgttacactacttccaaaggattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaattattatgacatt 34546133  T
Q  350 tgactactttattcaattc 368  Q
    |||||||||||||| ||||    
T  34546132 tgactactttattccattc 34546114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 337
Target Start/End: Original strand, 19164358 - 19164509
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtat 281  Q
    |||||||||||||| || ||||| |||  ||||||||||||||||||||| || |||||||| ||| |||||||||||  | | ||||||| ||||||||    
T  19164358 tttcaaaatgaatggcaatttcaatttttaatgcaataataactttttctttttaattgtatccttcaattaatattatat-acactactttcaaagtat 19164456  T
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||| |||||| |||||||||||||   ||||||||||||||    
T  19164457 tattttttctttaatgaataacaaaccaatagttgatta---taatttggtaaaat 19164509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 186 - 337
Target Start/End: Complemental strand, 40608751 - 40608603
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||| |||   || ||||||   ||| |||||||    
T  40608751 aaaatgaatgtcactttcagttt-caatgcaataataactttctct-ttcaattgtatactttaattaatctta-tatacactactattaaaatattatt 40608655  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||   ||||||||||||| ||||||||||||||    
T  40608654 ttttctttaatgaaaaacaaacttatagttgattaggataatttggtaaaat 40608603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 4658388 - 4658229
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||  ||||| ||| ||||| |||||||| ||||||| ||||||||||  ||| |||||||| ||  | | ||||||| |||||    
T  4658388 ttgtttcaaaatgaatgtctttttcatttttcaatgtaataataattttttcttttcaattgtacccttcaattaatactatat-acactactttcaaag 4658290  T
Q  279 tatta--ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||  ||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  4658289 tattaatttttttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaat 4658229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 43971502 - 43971644
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||| |||                |||||| ||||    
T  43971502 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtgcccttcaat----------------tacttctaaag 43971585  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  43971586 tattattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaat 43971644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 179 - 334
Target Start/End: Complemental strand, 43481026 - 43480870
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagt-ttccaatgca-ataataactttttctcttcaattgtattctttaattaata--ttacgttaaactacttcc 274  Q
    |||||||||||||| ||||| ||||||| || ||||||| ||||||||||||||| ||||||| ||   |||||||||||  |||   || || ||||||    
T  43481026 ttgtttcaaaatgactgtcattttcagtgtttcaatgcatataataactttttcttttcaattataccttttaattaatacttta---tacacaacttcc 43480930  T
Q  275 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaa 334  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||| |||||| ||||    
T  43480929 aaagtattattttttctttaatgaaaaacaaaccaatagtttattaggataatttagtaa 43480870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 302
Target Start/End: Complemental strand, 7028967 - 7028845
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||| ||||  ||| |||||||| ||   || ||||||| |||||    
T  7028967 ttgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttcttttcaaatgtacccttcaattaatacta-tatacactactttcaaag 7028869  T
Q  279 tattattttttctttaatgaaaaa 302  Q
    |||||||||||||||||| |||||    
T  7028868 tattattttttctttaataaaaaa 7028845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 43427442 - 43427379
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43427442 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgta 43427379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 16792446 - 16792545
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||| ||||||         |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  16792446 tccgttttaaaatgagtgtcgctttagc--aaaaaaattgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattgt 16792543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 36177939 - 36178051
Alignment:
Q  144 cgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtat 243  Q
    ||||| ||||||||||||||||||||         ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||     
T  36177939 cgtttcaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttttttttcaattgtac 36178038  T
Q  244 tctttaattaata 256  Q
     ||| ||||||||    
T  36178039 ccttcaattaata 36178051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 36685895 - 36685739
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaa-actacttccaaa 277  Q
    |||||| ||||||||||| ||||||| |||| ||| ||||||||| ||||||| ||||||||||  ||| |||||||| ||  | || |||||||  |||    
T  36685895 ttgttttaaaatgaatgttactttcaatttcaaatacaataataattttttcttttcaattgtacccttcaattaatacta--taaacactactttgaaa 36685798  T
Q  278 gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
     ||||||||||||||| ||| |||||||| ||||| ||||||||| ||||||||||||||    
T  36685797 atattattttttctttgatg-aaaacaaaccaataattgattaggataatttggtaaaat 36685739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 331 - 423
Target Start/End: Complemental strand, 43388660 - 43388568
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    |||||||||||||||| ||||||||||||||||||||  ||||| || || || ||||||||||||||||||||||| ||||||| |||||||    
T  43388660 gtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagggagtac 43388568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 10195759 - 10195830
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  10195759 actacttccaaaatattattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaat 10195830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 25332721 - 25332812
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||| || || || || |||||||||||||||||||||||||||| ||||||    
T  25332721 gtaaaattgctatgacatttgactactttattcaattccttaatctgtgtgcaattagctaaagcgacactcattttaaaacggagggagta 25332812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 45301763 - 45301826
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45301763 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgta 45301826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 266 - 415
Target Start/End: Original strand, 18717161 - 18717310
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaa 365  Q
    |||||||  ||||| |||||| || |||||||||||||||| ||||| ||||||||| |||||| |||||||||||||| | ||||||||| |||||  |    
T  18717161 actacttttaaagttttatttattttttaatgaaaaacaaaccaataattgattaggataattttgtaaaattgttatggcatttgactacattatttca 18717260  T
Q  366 ttctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||| ||| | || || || || |||||| |||||||| |||| |||||||    
T  18717261 ttcattagtctgtgtgcaattagctaaaacgacactctttttgaaacgga 18717310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 179 - 312
Target Start/End: Original strand, 29411694 - 29411826
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||| |||||| || |||||||  ||| |||||||||||   || | ||||| ||||     
T  29411694 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttctttttaattgtacccttcaattaatatta-tatacattactttcaaaa 29411792  T
Q  279 tattattttttctttaatgaaaaacaaatcaata 312  Q
    ||||||||||||| ||| |||||||||| |||||    
T  29411793 tattattttttctctaaggaaaaacaaaccaata 29411826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 179 - 334
Target Start/End: Original strand, 11132548 - 11132703
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttc-tcttcaattgtattctttaattaatattacgttaaactacttccaaa 277  Q
    |||||| || |||||| | | |||||||||| ||| |||||||||||||||  | ||||||||||| |||||||||||| ||  | | | ||||| ||||    
T  11132548 ttgttttaacatgaattttattttcagtttcaaattcaataataacttttttattttcaattgtatcctttaattaatactatat-acattactttcaaa 11132646  T
Q  278 gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaa 334  Q
     ||||||||||||||||||||||||||||  ||||||||||||   |||||||||||    
T  11132647 atattattttttctttaatgaaaaacaaacaaatagttgattataataatttggtaa 11132703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 22620526 - 22620426
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||| | ||||||         |||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||    
T  22620526 tccgttttaaaatgagtgttgctttagcaaaataaagttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttcttttcaattgt 22620427  T
Q  242 a 242  Q
    |    
T  22620426 a 22620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 180 - 256
Target Start/End: Complemental strand, 27964524 - 27964448
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  27964524 tgtttcgaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaata 27964448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 7872845 - 7872774
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||    
T  7872845 actactttcaaagtattattttttctttaatgaaaaacaaatcaatagtcgatcagaataatttggtaaaat 7872774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 33055975 - 33056046
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  33055975 actactttcaatgtattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 33056046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 35799201 - 35799308
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||  ||  ||||||||||| |  | ||||||| |||||    
T  35799201 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataacttttt-ttttcaattgtaccctccaattaatattatg-cacactactttcaaag 35799298  T
Q  279 tattattttt 288  Q
    ||||| ||||    
T  35799299 tattactttt 35799308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 4051859 - 4051795
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataa-ctttttctcttcaattgta 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  4051859 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttcttttcaattgta 4051795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 4469499 - 4469579
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatatta 259  Q
    |||||| ||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||  ||| |||||||||||    
T  4469499 ttgttttaaaatgaatttcactttcagttttcaatacaataataactttttcttttcaattgtacccttaaattaatatta 4469579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 34546486 - 34546410
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaat 255  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||| || |||||||  ||| |||||||    
T  34546486 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttaaattgtacccttcaattaat 34546410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 302
Target Start/End: Complemental strand, 7042341 - 7042219
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||| ||||| || ||||||||||||| ||||||||| || || ||||  ||| |||||||| ||   || ||||||| |||||    
T  7042341 ttgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctttttaaatgtacccttcaattaatacta-tatacactactttcaaag 7042243  T
Q  279 tattattttttctttaatgaaaaa 302  Q
    |||| ||||||||||||| |||||    
T  7042242 tattcttttttctttaataaaaaa 7042219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 14698139 - 14698230
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| ||||||||||||||||||||  ||||| || || || ||||||||||||||||||||||| ||||| | ||||||    
T  14698139 gtaaaattgctatgacatttgactactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacgaagggagta 14698230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 15083307 - 15083162
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||| ||| |||||| | ||||||||||||||||||||||||| |||| | |||||||||| |||| |||||||          |||||||| ||||    
T  15083307 ttgtttcgaaaagaatgttattttcagtttccaatgcaataataacattttattttcaattgtactcttcaattaat----------actacttctaaag 15083218  T
Q  279 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||| ||||||||||||||||    ||||||||| ||||||| | ||||||||||||||    
T  15083217 tattatttttttctttaatgaa----aaatcaataattgattatgataatttggtaaaat 15083162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 17695980 - 17695917
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  17695980 ttgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttcttttcaattgta 17695917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 334
Target Start/End: Complemental strand, 33482384 - 33482230
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||| | ||| ||||| |||||||  ||||||| ||||| |||| |||| |||||||| ||   || | || ||| ||||    
T  33482384 ttgttttaaaatgaatgtcacttttatttttcaatgtaataatatttttttcttttcaactgtactcttcaattaataata-tatacattatttcgaaag 33482286  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaa 334  Q
    ||||| |||||| ||||| ||||||||| ||| |||||| |||| |||||||||||    
T  33482285 tattaatttttccttaataaaaaacaaaccaaaagttgaataggataatttggtaa 33482230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 5717512 - 5717574
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  5717512 tgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttctttttaattgta 5717574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 186 - 256
Target Start/End: Complemental strand, 16463180 - 16463110
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaata 16463110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 27726484 - 27726417
Alignment:
Q  268 tacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||| |||||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  27726484 tacttccaaattattatttttt--ttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 27726417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 9391710 - 9391633
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatatta 259  Q
    ||||||||||||||||| |||||||||  ||||||||||||| ||||||| |||||||||   |||||||||||||||    
T  9391710 tttcaaaatgaatgtcattttcagtttttaatgcaataataattttttcttttcaattgtgacctttaattaatatta 9391633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 11188686 - 11188583
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaa 237  Q
    |||||||||||||||||||||||| |||||||         || ||||||||||||||||||||||||||| |||||||| |||||||| || | |||||    
T  11188686 tccttccgttttaaaatgagtgtcattttagc--aaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaacaataacttatttttttcaa 11188589  T
Q  238 ttgtat 243  Q
    ||||||    
T  11188588 ttgtat 11188583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 775887 - 775807
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaa 411  Q
    |||||||||||||||| |||||||||||||||| |||| ||||| ||  | || ||||||||||||||| |||||||||||    
T  775887 gtaaaattgttatgacatttgactactttattctattccttaatctgtatgcaattggctaaagcgacattcattttaaaa 775807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 14285939 - 14285999
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||||||    
T  14285939 tttcaaaatgaatgtcattttcagtttccaatacaataataacttttttttttcaattgta 14285999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 27964282 - 27964222
Alignment:
Q  277 agtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||    
T  27964282 agtattattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaat 27964222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 11188305 - 11188247
Alignment:
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||    
T  11188305 tattattttttctttaatgaaaaacaacccaatagttgattaggataacttggtaaaat 11188247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 17703017 - 17703069
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttct 231  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  17703017 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttct 17703069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 388 - 427
Target Start/End: Complemental strand, 5717502 - 5717463
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagtacttgt 427  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5717502 gctaaagcgacactcattttaaaacggatggagtacttgt 5717463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 7644651 - 7644722
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatat 257  Q
    ||||||||||||||||||||| | ||||  |||||||||||||||| ||||||||||  ||| |||||||||    
T  7644651 aaaatgaatgtcactttcagtattcaatataataataactttttcttttcaattgtacccttcaattaatat 7644722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 28072565 - 28072615
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 229  Q
    |||||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  28072565 ttgttttaaaatgaatgtcactttcagttttcaatacaataataacttttt 28072615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 32254554 - 32254639
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttt 228  Q
    |||||||||||||||||||| |||||||         ||||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  32254554 tccgttttaaaatgagtgtcattttagcaaaataaaattgtttcaaaatgaa-gtcactttcagtttccaatgaaataataattttt 32254639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 256
Target Start/End: Complemental strand, 7874838 - 7874722
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaa 237  Q
    ||||| |||||||||||||||||||||||| ||        || ||| ||||| |||||||||||  ||||||||||||||||||||||||||| |||||    
T  7874838 tcctttcgttttaaaatgagtgtcgttttacctaaaaaaa-ttattttaaaattaatgtcactttt-gtttccaatgcaataataactttttcttttcaa 7874741  T
Q  238 ttgtattctttaattaata 256  Q
    | |||  ||| ||||||||    
T  7874740 tcgtacccttcaattaata 7874722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 19469613 - 19469673
Alignment:
Q  271 ttccaaagtattatttt--ttctttaatgaaaaacaaatcaatagttgattaggctaattt 329  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||||| | ||||||    
T  19469613 ttccaaagtattattttttttctttaatgaaaaacaaatcaataattgattacgataattt 19469673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 326 - 423
Target Start/End: Original strand, 33093513 - 33093610
Alignment:
Q  326 atttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    |||| |||||||||||||||| ||| |||||||||||  |||  |||||  | || || ||||||||||||| |||||||| |||||| |||||||||    
T  33093513 atttagtaaaattgttatgacatttaactactttatttcatttcttaatccgtgtacaattggctaaagcgatactcatttgaaaacgaatggagtac 33093610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 35046516 - 35046565
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttt 228  Q
    |||||| || |||||||||||||||| |||||||||||||||||||||||    
T  35046516 ttgttttaagatgaatgtcactttcaatttccaatgcaataataactttt 35046565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 4566124 - 4566040
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||||||||||||  |||||||| ||||||  ||| |||||| || ||  | ||| |||||||||||||||||||||||||||    
T  4566124 gtaaaattgttatgatatttgactattttattacattttttaatctgtgtgtaattgactaaagcgacactcattttaaaacgga 4566040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 14833890 - 14833838
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttct 231  Q
    |||||| ||||||||||||||||||| ||| |||||||| |||||||||||||    
T  14833890 ttgttttaaaatgaatgtcactttcaattttcaatgcaacaataactttttct 14833838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 45423618 - 45423674
Alignment:
Q  181 gtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaa 237  Q
    |||| ||||||| ||| | |||||||||||||||||||||||||||||||| |||||    
T  45423618 gttttaaaatgattgttattttcagtttccaatgcaataataactttttcttttcaa 45423674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 16792473 - 16792439
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||||||||||    
T  16792473 gctaaagcgacactcattttaaaacggatggagta 16792439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 365 - 411
Target Start/End: Complemental strand, 36360344 - 36360298
Alignment:
Q  365 attctttaatttgcgtccagttggctaaagcgacactcattttaaaa 411  Q
    |||||||||||||||| || ||| |||||||||||||||||||||||    
T  36360344 attctttaatttgcgtgcaattgactaaagcgacactcattttaaaa 36360298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 4051677 - 4051710
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttag 168  Q
    ||||||||||||||||||||||||||||||||||    
T  4051677 tattccttccgttttaaaatgagtgtcgttttag 4051710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 10195572 - 10195635
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||| ||||||||||| ||||| | ||| ||||||||||||||| |||| | ||||||||||    
T  10195572 ttgttttaaaatgaatgttacttttaattttcaatgcaataataacattttattttcaattgta 10195635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 40987458 - 40987419
Alignment:
Q  131 agtctattccttccgttttaaaatgagtgtcgttttagct 170  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  40987458 agtctactccatccgttttaaaatgagtgtcgttttagct 40987419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 777768 - 777818
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 229  Q
    |||||| ||||||||||||| ||||| |||| |||||||||||||| ||||    
T  777768 ttgttttaaaatgaatgtcattttcaatttctaatgcaataataacctttt 777818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 422
Target Start/End: Original strand, 983735 - 983765
Alignment:
Q  392 aagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||||||    
T  983735 aagcgacactcattttaaaacggatggagta 983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 7743583 - 7743641
Alignment:
Q  364 aattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||| || ||  | ||||||||||||||||||||||| ||||||||| ||||    
T  7743583 aattctttaatctgtgtgaaattggctaaagcgacactcattttgaaacggatgtagta 7743641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 422
Target Start/End: Original strand, 24775367 - 24775429
Alignment:
Q  360 attcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||| | |||||||| || || ||| ||||| |||||||||| |||||||||||||||||    
T  24775367 attcaataccttaatttgtgtgcaattgactaaaacgacactcatcttaaaacggatggagta 24775429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 27726592 - 27726542
Alignment:
Q  283 attttttctttaatgaaaaacaaatcaatagttgattaggctaatttggta 333  Q
    ||||||| ||||||||||||||||  ||||||| |||||| ||||||||||    
T  27726592 attttttttttaatgaaaaacaaactaatagttaattaggataatttggta 27726542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 27986034 - 27986083
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 229  Q
    |||||| ||||||||||||||||||||||| |||| |||||| ||||||||    
T  27986034 ttgttttaaaatgaatgtcactttcagttttcaatacaataa-aacttttt 27986083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 32228175 - 32228209
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||| ||||||||||||||||||||||||||||    
T  32228175 gctaaaacgacactcattttaaaacggatggagta 32228209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 37724235 - 37724201
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||| ||||||    
T  37724235 gctaaagcgacactcattttaaaacggagggagta 37724201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 39866674 - 39866596
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgt-ccagttggctaaagcgacactcatttta 408  Q
    ||||||||| |||||| |||||||||||||||| |||| ||||| || || | | |||| |||| ||||||||||||||    
T  39866674 gtaaaattgctatgacatttgactactttattccattccttaatctgtgtgcaaattggttaaaacgacactcatttta 39866596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 40987228 - 40987194
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||| ||||||    
T  40987228 gctaaagcgacactcattttaaaacggagggagta 40987194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 40987420 - 40987454
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||| ||||||||||||||||||||||||||||    
T  40987420 gctaaaacgacactcattttaaaacggatggagta 40987454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 421
Target Start/End: Original strand, 776048 - 776081
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagt 421  Q
    |||||||||||||||||||| |||||||||||||    
T  776048 gctaaagcgacactcattttgaaacggatggagt 776081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 29795351 - 29795388
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  29795351 ttggctaaagtgacattcattttaaaacggatggagta 29795388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 34455793 - 34455846
Alignment:
Q  283 attttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaa 336  Q
    |||||||||||||| ||||  ||| || |||||||||||| |||||||||||||    
T  34455793 attttttctttaataaaaattaaaccagtagttgattaggataatttggtaaaa 34455846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 44228670 - 44228707
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  44228670 ttggctaaagcgacattcattttaaaacggagggagta 44228707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 45081851 - 45081818
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| ||||||||||||||||||||||||||||    
T  45081851 ctaaaacgacactcattttaaaacggatggagta 45081818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #104
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 388 - 424
Target Start/End: Complemental strand, 1422137 - 1422101
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  1422137 gctaaaacgacactcattttaaaacggacggagtact 1422101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #105
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 422
Target Start/End: Original strand, 7028977 - 7029009
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||| ||||||||||||||||||||||||||||    
T  7028977 taaatcgacactcattttaaaacggatggagta 7029009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #106
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 385 - 417
Target Start/End: Original strand, 34225953 - 34225985
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatg 417  Q
    ||||||||||||||||||||||| |||||||||    
T  34225953 ttggctaaagcgacactcattttgaaacggatg 34225985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #107
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 35046614 - 35046646
Alignment:
Q  196 tcactttcagtttccaatgcaataataactttt 228  Q
    ||||||| |||||||||||||||||||||||||    
T  35046614 tcacttttagtttccaatgcaataataactttt 35046646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 160; Significance: 7e-85; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 142 - 425
Target Start/End: Complemental strand, 24932 - 24649
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| |||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24932 tccgtttcaaaatgagtgtcgttttatccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 24833  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| || |||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||| |    
T  24832 acccttcaattaatactatgttacaatacttccaaagtattatcttttctttaatgaaaaacaaaccaatagttgattaggatagtttggtaaaattgct 24733  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    ||||| |||||||| ||||||| |||| ||||| || || ||  ||||||||||||||||||||||||||||||||||||||||    
T  24732 atgacatttgactattttattccattccttaatatgtgtacaaatggctaaagcgacactcattttaaaacggatggagtactt 24649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 160; Significance: 7e-85; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 42104218 - 42103975
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||| |||||||| || |||| ||||||||||| |    
T  42104218 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattttacccttcaattaatactatgttacactacttccaagg 42104119  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| |||| ||||| ||     
T  42104118 tattattttttctttaatgaaaaacaagtcaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatatgt 42104019  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||||||||||||||||||||||| ||||||| ||||||    
T  42104018 gtgcaattggctaaagcgacactcattttgaaacggagggagta 42103975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 146 - 422
Target Start/End: Original strand, 39566148 - 39566424
Alignment:
Q  146 ttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattc 245  Q
    ||||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |    
T  39566148 ttttaaaatgagtgtcgttttagcccaaaaaatttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccc 39566247  T
Q  246 tttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatga 345  Q
    || |||||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39566248 ttcaattaataatatgttacactacttccaaagtattattttctctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgttatga 39566347  T
Q  346 cttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    | |||||||||||||||  |||| ||||| || ||  | |||| |||||||||||||||||| ||| ||| ||||||    
T  39566348 catttgactactttatttcattccttaatatgtgtgtaattggttaaagcgacactcattttgaaatggagggagta 39566424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 142 - 422
Target Start/End: Complemental strand, 2729978 - 2729698
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| |||||||||||||||||| |         |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  2729978 tccgtttcaaaatgagtgtcgttttaaccaaaaaaacttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgt 2729879  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||| | || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |    
T  2729878 acccttcaattaaaactatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgct 2729779  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| |||||||||||||||  |||| ||||| ||  | || ||||||||||||||| ||||||| ||||||||||||||    
T  2729778 atgacgtttgactactttatttcattccttaatctgtatgcaattggctaaagcgacaatcattttgaaacggatggagta 2729698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 142 - 422
Target Start/End: Complemental strand, 14620686 - 14620405
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||||||||||         || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14620686 tccgtttcaaaatgagtgtcgttttagccaaaaaaaattatttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 14620587  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |   || ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| | ||||||| |||||||| |    
T  14620586 acctttcaattaatattatgttacactacttccaaagtattattttttctttgatgaaaaacaaaccaataattgattaagataatttgataaaattgct 14620487  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcat-tttaaaacggatggagta 422  Q
    ||||| |||||||||||||||| |||| ||||| || || || |||||||||||||||||||| ||| ||||||||| ||||    
T  14620486 atgacatttgactactttattctattccttaatatgtgtgcaattggctaaagcgacactcatatttgaaacggatgaagta 14620405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 186 - 415
Target Start/End: Complemental strand, 3306157 - 3305927
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||| |||||||| |  |||| ||||||||||||||||||||    
T  3306157 aaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactctgttacactacttccaaagtattatt 3306058  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagt 385  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| |||||||||||||||  |||| ||||| | ||| || |    
T  3306057 ttttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaattgctatgacatttgactactttatttcattccttaatatacgtgcaat 3305958  T
Q  386 tggctaaagcgacactcatttt-aaaacgga 415  Q
    ||| |||| ||||||||||||| ||||||||    
T  3305957 tggttaaaacgacactcattttgaaaacgga 3305927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 39504720 - 39504966
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaat-aataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaa 277  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||    
T  39504720 ttgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttcttttcaattgtatcctttaattaatattatgttacactacttccaaa 39504819  T
Q  278 gtatta--ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatt 375  Q
     |||||  ||||||||||| |||||||||||  |||||||||||||  ||||||||||||||||||| ||| ||| |||||||||||  ||||||||||     
T  39504820 atattattttttttctttattgaaaaacaaactaatagttgattagaataatttggtaaaattgttacgacattttactactttatttcattctttaata 39504919  T
Q  376 tgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||     | ||| ||||||||||||||||||||||||||||||||||    
T  39504920 tgtacgtaattgactaaagcgacactcattttaaaacggatggagta 39504966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 179 - 415
Target Start/End: Original strand, 6518974 - 6519211
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||  ||| |||||||| || |||| ||||||| |||||    
T  6518974 ttgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 6519073  T
Q  279 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttg 377  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||||||  |||| ||||| ||    
T  6519074 tattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaattgttatgacattttactactttatttcattccttaatatg 6519173  T
Q  378 cgtccagttggctaaagcgacactcattttaaaacgga 415  Q
     ||  | ||  ||||| |||||||||||||||||||||    
T  6519174 tgtgtaattaactaaaacgacactcattttaaaacgga 6519211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 146 - 423
Target Start/End: Complemental strand, 8336597 - 8336318
Alignment:
Q  146 ttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattc 245  Q
    |||||||||||||||||||||||||         | |||||||||||||||||||| || ||| ||||||||||||||||| || | |||||||||| ||    
T  8336597 ttttaaaatgagtgtcgttttagctaaaataaaatatttcaaaatgaatgtcacttccatttttcaatgcaataataacttctttttttcaattgtactc 8336498  T
Q  246 tttaattaatattacgttaaactacttccaaagtattatttttt--ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttat 343  Q
    || |||||||| || |||| |||||||||||| |||||||||||  ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||    
T  8336497 ttcaattaatactatgttacactacttccaaaatattattttttttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaattgttat 8336398  T
Q  344 gacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    ||| |||||||||||||||| |||| ||||| |  ||  | ||||||||| ||||||||||||||||| ||| |||||||    
T  8336397 gacatttgactactttattccattccttaatatttgtgtaattggctaaaacgacactcattttaaaatggagggagtac 8336318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 26660753 - 26660995
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||  ||| |||||||| || |||| |||||||| | ||    
T  26660753 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttatactacttctagag 26660852  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |  ||||||||||||||| |||||| |||||| ||||||||  |||| ||||| ||     
T  26660853 tattatttt-tctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaattgctatgacatttgacaactttatttcattccttaatatgt 26660951  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||||||||||||||||||||||||||||||| ||||||    
T  26660952 gtgcaattggctaaagcgacactcattttaaaacggagggagta 26660995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 26932346 - 26932588
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||  ||| |||||||| || |||| |||||||| | ||    
T  26932346 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttatactacttctagag 26932445  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |  ||||||||||||||| |||||| |||||| ||||||||  |||| ||||| ||     
T  26932446 tattatttt-tctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaattgctatgacatttgacaactttatttcattccttaatatgt 26932544  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||||||||||||||||||||||||||||||| ||||||    
T  26932545 gtgcaattggctaaagcgacactcattttaaaacggagggagta 26932588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 179 - 410
Target Start/End: Complemental strand, 34446182 - 34445952
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||| ||||||||| |||| |||||||||| |||||| ||||||||||  ||| |||||||| || |||| |||||||||||||    
T  34446182 ttgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 34446083  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||  |||||||||||||||  |||| ||||| |      
T  34446082 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaatt-ctatgatatttgactactttatttcattccttaatatat 34445984  T
Q  379 gtccagttggctaaagcgacactcattttaaa 410  Q
    || || |||| |||||||||||||||||||||    
T  34445983 gtgcaattggttaaagcgacactcattttaaa 34445952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 186 - 422
Target Start/End: Complemental strand, 42662087 - 42661852
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||| | ||| ||||| ||||| |||||||| ||||| | ||||||||||  ||| |||||||| || |||| ||||||||||||||||||||    
T  42662087 aaaatgaatgttatttttagttttcaatgtaataataatttttttt-ttcaattgtacccttcaattaatactatgttacactacttccaaagtattatt 42661989  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagt 385  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  |||| ||||| || || || |    
T  42661988 ttttctttaataaaaaacaaactaatagttgattaggataatttggtaaaattgttatgacatttgactattttatttcattccttaatatgtgtgcaat 42661889  T
Q  386 tggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  42661888 tggctaaagcgacactcattttgaaacgaatggagta 42661852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 182 - 422
Target Start/End: Original strand, 39729960 - 39730187
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtat 281  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||             |||| || |||| |||||||||||| |||    
T  39729960 tttcaaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaatt-------------aatactatgttacactacttccaaaatat 39730046  T
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtc 381  Q
    |||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| |||||| |||||||||||||||| |||| ||||| || ||     
T  39730047 tattttttctttaatgaaaaacaaacgaatagttgattaggataatttggtaaaattgctatgacatttgactactttattccattccttaatatgtgtg 39730146  T
Q  382 cagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || ||| ||||| ||||||||||||||||||| || |||||    
T  39730147 caattgcctaaaacgacactcattttaaaacgaatagagta 39730187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 200 - 407
Target Start/End: Original strand, 14005911 - 14006118
Alignment:
Q  200 tttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaa 299  Q
    |||||||||||||||||||||||||||||||| || |||| ||| ||| |||||||| || |||| ||||||||||| ||||||||||||||||||||||    
T  14005911 tttcagtttccaatgcaataataactttttctttttaattttatccttcaattaatactatgttacactacttccaaggtattattttttctttaatgaa 14006010  T
Q  300 aaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgaca 399  Q
    ||||||| ||||| ||||||||| |||||||||||||| | |||||| |||||||||||||||  |||| ||||| |   | || ||||||||||| |||    
T  14006011 aaacaaaccaatatttgattaggataatttggtaaaatagctatgacatttgactactttatttcattccttaatatatatgcaattggctaaagcaaca 14006110  T
Q  400 ctcatttt 407  Q
    ||||||||    
T  14006111 ctcatttt 14006118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 217 - 424
Target Start/End: Complemental strand, 39335321 - 39335113
Alignment:
Q  217 ataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatttttt-ctttaatgaaaaacaaatcaatagtt 315  Q
    ||||||||||||||| ||||||||||  ||| |||||||| || |||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  39335321 ataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtgttatttttttctttaatgaaaaacaaaccaatagtt 39335222  T
Q  316 gattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||||| ||||||||||||||| ||||||  ||||||||||||||||||||| |||||||   | || ||| ||||| ||||| |||||||||||||||    
T  39335221 gattaggataatttggtaaaattattatgatatttgactactttattcaattccttaatttatatgcaattgactaaaacgacattcattttaaaacgga 39335122  T
Q  416 tggagtact 424  Q
     ||| ||||    
T  39335121 gggattact 39335113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 138 - 415
Target Start/End: Complemental strand, 21375846 - 21375569
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaa 237  Q
    ||||||||||| ||||||||||||||||||||         |||||| ||||| ||||||||||||||||| |||||||| |||   ||||| | |||||    
T  21375846 tccttccgtttcaaaatgagtgtcgttttagc-caaaaaaattgttttaaaataaatgtcactttcagttttcaatgcaaaaattttttttttttttcaa 21375748  T
Q  238 ttgtattctttaattaatattacgttaaactacttccaaagtattatttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaa 336  Q
    |||||  ||| |||||||| || |||| ||||||| ||||||| |||||||| |||||||||||||||||  ||||| |||||||| |||||||||||||    
T  21375747 ttgtacccttcaattaatactatgttacactactttcaaagtaatatttttttctttaatgaaaaacaaacaaataggtgattaggataatttggtaaaa 21375648  T
Q  337 ttgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||| |||||  |||||||| ||||||| |||||||||| |  || || |||||||||| |||||||||||| |||||||    
T  21375647 ttgctatgatatttgactattttattccattctttaatctttgtgcaattggctaaagtgacactcattttgaaacgga 21375569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 183 - 336
Target Start/End: Original strand, 11977590 - 11977742
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    ||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||  | | |||||||||||||||||    
T  11977590 ttcaaaacgaatgtcactttcagtttccaataccataataactttttcttttcaattgtatcctttaattaatattatat-acactacttccaaagtatt 11977688  T
Q  283 attttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaa 336  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  11977689 attttttctttaatgaacaacaaaccaatagttgattaggataatttggtaaaa 11977742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 186 - 422
Target Start/End: Complemental strand, 29807465 - 29807226
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataata--actttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatta 283  Q
    ||||||||||| ||||| |||||| ||||||||||||  ||||||||| ||||||||||   || |||||||| || |||| |||||||||||| |||||    
T  29807465 aaaatgaatgttactttgagtttctaatgcaataatataactttttcttttcaattgtaccattcaattaatactatgttacactacttccaaaatatta 29807366  T
Q  284 tttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtcc 382  Q
    |||||| ||||| | ||||||||| ||||||||||||||| |||||||||||||||  ||| || |||||||| ||||||| |||| ||||| ||||| |    
T  29807365 tttttttctttagtaaaaaacaaaccaatagttgattaggataatttggtaaaatttctattacatttgactaatttattccattccttaatatgcgtgc 29807266  T
Q  383 agttggctaaagcgacactcattttaaaacggatggagta 422  Q
      ||||||||||||||||| ||||| ||||||| ||||||    
T  29807265 tattggctaaagcgacacttattttgaaacggagggagta 29807226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 179 - 339
Target Start/End: Complemental strand, 21319465 - 21319307
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||| ||||||||||| |||| ||||| ||||||     
T  21319465 ttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactac-tccaaaa 21319367  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattg 339  Q
    || ||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  21319366 ta-tatattttttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 21319307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 142 - 411
Target Start/End: Complemental strand, 42978257 - 42977996
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    |||||||||||||||||||||||||||||        | |||| ||||||||| ||||||||||||| |||||||||||||||   |       | ||||    
T  42978257 tccgttttaaaatgagtgtcgttttagctaaaaaaaat-gttttaaaatgaatatcactttcagttttcaatgcaataataaccaat-------agttgt 42978166  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    | | || |||||||| || |||| ||||||| || |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |    
T  42978165 actattcaattaatactatgttacactacttacatagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgct 42978066  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaa 411  Q
    ||||| |||||||||||||||  |||| ||||| || ||  | ||||||||| ||||||||||| |||||    
T  42978065 atgacatttgactactttatttcattccttaatctgtgtgaaattggctaaaacgacactcattctaaaa 42977996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 271 - 422
Target Start/End: Complemental strand, 34972713 - 34972562
Alignment:
Q  271 ttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctt 370  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||||||||| |||||||||||||||| || ||| |||||||||||||||| |||  |    
T  34972713 ttccaaagtattattctttctttaataaaaaacaaattaatagttgattaggataatttggtaaaattgatacgacatttgactactttattccatttat 34972614  T
Q  371 taatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||| || || || ||||||||||||||||||||||||||||||| ||||||    
T  34972613 taatctgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 34972562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 199 - 422
Target Start/End: Original strand, 27600417 - 27600635
Alignment:
Q  199 ctttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatga 298  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||  ||| |||||||| ||  ||| |||| || | |||||     |||| ||||||||    
T  27600417 ctttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaatactatattacactattttcgaagta-----ttttttttaatga 27600511  T
Q  299 aaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgac 398  Q
    |||||||||||||||||||||||| |||||||||||||||   ||||  |||||||||||||||  |||| ||||| || || || |||||||||| |||    
T  27600512 aaaacaaatcaatagttgattaggataatttggtaaaattacaatgatatttgactactttatttcattccttaatatgtgttcaattggctaaagtgac 27600611  T
Q  399 actcattttaaaacggatggagta 422  Q
    ||||||||||||| ||| ||||||    
T  27600612 actcattttaaaatggagggagta 27600635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 179 - 374
Target Start/End: Original strand, 4424975 - 4425167
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||| ||| |||||||| |||| ||||  || ||||   |||||| ||||||||||   || |||||||| ||  ||| |||||||||||||    
T  4424975 ttgttttaaaataaatatcactttcggttttcaataaaacaata---ttttcttttcaattgtacctttcaattaatactatattacactacttccaaag 4425071  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaat 374  Q
    |||||||||||||||||||||||||||||| |||| |||||| | |||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  4425072 tattattttttctttaatgaaaaacaaatcgatagatgattaagataatttggtaaaattggtatgacatttgactactttattcaattccttaat 4425167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 186 - 337
Target Start/End: Original strand, 27797786 - 27797933
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| | |||||| ||   || | |||||||||||||||| |    
T  27797786 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcagttaatacta---tatattacttccaaagtatta-t 27797881  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  27797882 ttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaat 27797933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 145 - 337
Target Start/End: Original strand, 36164853 - 36165042
Alignment:
Q  145 gttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtatt 244  Q
    |||||||||||||||||||||||||         || ||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| ||      
T  36164853 gttttaaaatgagtgtcgttttagc--caaaaaattattttaaaatgaatgtcattttcagtttccaatgcagtaataactttttcttttcaattatacc 36164950  T
Q  245 ctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||| |||||||| ||  | | | |||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  36164951 cttcaattaatactatat-acattacttccaaaatattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaat 36165042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 180 - 337
Target Start/End: Complemental strand, 15167164 - 15167009
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagt 279  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| || |||| ||||| || ||  | | |||||||||||| |    
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttttt-ttcaattttactcttcaattattactatat-acactacttccaaaat 15167067  T
Q  280 attattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||||||||||||||    
T  15167066 attattttttctttaatgaaaaattaaccaatagttgactaggataatttggtaaaat 15167009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 186 - 337
Target Start/End: Original strand, 34534365 - 34534514
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataacttttt-ctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattat 284  Q
    |||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||  ||| |||||||| || |  | |||||||||||| ||||||    
T  34534365 aaaatgaatgtcactttca--ttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatgc-acactacttccaaaatattat 34534461  T
Q  285 tttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  34534462 tttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 34534514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 38369834 - 38370027
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||| |||||||||||          |||||| ||||||||| ||||||| | |||||||||||||||||||||||||| || ||||||    
T  38369834 tccgttttaaaatgaatgtcgttttagtaaaaaaaaattgttttaaaatgaatatcactttta-tttccaatgcaataataactttttcttttaaattgt 38369932  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    | |||| |||||||||||  | | ||||||| ||||||||||||||||  |||||||||||| ||  |||||||||||||| ||||||||||||||    
T  38369933 actcttcaattaatattatat-acactactttcaaagtattatttttttattaatgaaaaacgaacaaatagttgattaggataatttggtaaaat 38370027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 179 - 292
Target Start/End: Original strand, 13761555 - 13761668
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||| ||||||||||  ||| |||||||| || |||| |||||||||||||    
T  13761555 ttgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 13761654  T
Q  279 tattattttttctt 292  Q
    ||||||||||||||    
T  13761655 tattattttttctt 13761668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 843019 - 843173
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgt-taaactacttccaaa 277  Q
    ||||||| |||||||||||||||||||||| |||||||||||   ||||| || ||||||||||   || ||||||||||  || || |||||||| |||    
T  843019 ttgtttcgaaatgaatgtcactttcagtttgcaatgcaataa---cttttccttttcaattgtaccattcaattaatatt--gtatacactacttcaaaa 843113  T
Q  278 gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    || |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  843114 gtgttattttttctttaatgagaaacaaaccaatagttgattaggataatttggtaaaat 843173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 7316989 - 7317089
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7316989 tccgttttaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 7317088  T
Q  242 a 242  Q
    |    
T  7317089 a 7317089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 179 - 301
Target Start/End: Complemental strand, 34209052 - 34208926
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaat---gcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttcca 275  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||| | ||||||| ||  ||| |||||||||||  ||| ||||||||||    
T  34209052 ttgtttcaaaatgaatgtcactttcagtttccaataatgcaataataacttttttttttcaattatacccttcaattaatattatattacactacttcca 34208953  T
Q  276 aagtattatt-ttttctttaatgaaaa 301  Q
    || ||||||| ||||||||||||||||    
T  34208952 aaatattatttttttctttaatgaaaa 34208926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 7721094 - 7721250
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||| |||||||  |||| |||||||||||||||||||| | |||||||||||  || ||| |||||||  | | | ||||| |||||    
T  7721094 ttgtttcaaaatgaatatcactttatgttttcaatgcaataataacttttttt-ttcaattgtatcattcaatcaatattatat-acattactttcaaag 7721191  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||| ||||||| ||||||    
T  7721192 tattattttttctttaaagacaaacaaaccaataattgattaggataatttgttaaaat 7721250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 180 - 337
Target Start/End: Complemental strand, 38362291 - 38362135
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata--ttacgttaaactacttccaaa 277  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||| || ||||||| ||  | | ||||||||  |||   || |||||||  |||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttttccttttcaattatacccataaattaatacttta---tatactacttttaaa 38362195  T
Q  278 gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||| ||||| ||| |||||||| |||||| |||||| |||||||    
T  38362194 gtattattttttctttaataaaaaataaaacaatagttaattaggataatttagtaaaat 38362135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 10345087 - 10345024
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10345087 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgta 10345024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 3025123 - 3025023
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||| ||||||| |||||||        |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  3025123 tccgtttcaaaataagtgtcgctttagctaaaaaaaattgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgt 3025024  T
Q  242 a 242  Q
    |    
T  3025023 a 3025023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 4911184 - 4911112
Alignment:
Q  266 actacttccaaagtattatttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  4911184 actactttcaaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 4911112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 258
Target Start/End: Complemental strand, 7580024 - 7579945
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatatt 258  Q
    |||||| ||||||||||| ||||||||||| |||| ||||||||||||||||| |||||||||| |||| ||||||||||    
T  7580024 ttgttttaaaatgaatgttactttcagttttcaatacaataataactttttcttttcaattgtactcttcaattaatatt 7579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 24280991 - 24281054
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  24280991 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaattgta 24281054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 24381221 - 24381158
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  24381221 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaattgta 24381158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 186 - 337
Target Start/End: Complemental strand, 14162049 - 14161898
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt-gtattctttaattaatattacgttaaactacttccaaagtattat 284  Q
    ||||| ||||||| |||  ||||| ||||||||||||| ||||||| ||||||| |||   || |||||||| ||  | | |||||||||||||||||||    
T  14162049 aaaataaatgtcattttaggtttctaatgcaataataattttttcttttcaatttgtaccattcaattaatactatat-acactacttccaaagtattat 14161951  T
Q  285 tttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||| ||| || |||||| ||| | ||||||| ||||||    
T  14161950 tttttctttaatgaaaaataaaccagtagttgtttatgataatttgataaaat 14161898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 7736458 - 7736529
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||| |||||||||||||||||||||||||||||| ||  |||||||||||||| |||| |||||||||    
T  7736458 actactttcaaagtattattttttctttaatgaaaaacgaactaatagttgattaggataatatggtaaaat 7736529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 186 - 337
Target Start/End: Original strand, 13974282 - 13974429
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatta-t 284  Q
    ||||||||||||||||| ||    |||||||||||||| ||| ||| ||||||||||   || ||||| |||||  | |  ||||||||||| ||||| |    
T  13974282 aaaatgaatgtcacttttag----caatgcaataataattttatcttttcaattgtaccattcaattattattatat-atgctacttccaaaatattact 13974376  T
Q  285 tttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||| ||||||||  |||||||||||||| ||||||||||||||    
T  13974377 tttttctttaatggaaaacaaacaaatagttgattaggataatttggtaaaat 13974429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 35766051 - 35765992
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  35766051 ttcaaaatgaatgtcactttcagttttcaatacaataataactttttcttttcaattgta 35765992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 284 - 415
Target Start/End: Original strand, 13761823 - 13761952
Alignment:
Q  284 ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtcca 383  Q
    ||||||||||||||||||| ||| ||||||||||||| | |||||| |||||||||   |||| ||||| |||||||||| |||  |||||||   | ||    
T  13761823 ttttttctttaatgaaaaataaaccaatagttgattaagataattttgtaaaattg--ctgacatttgattactttattccatttcttaatttatttgca 13761920  T
Q  384 gttggctaaagcgacactcattttaaaacgga 415  Q
     ||| ||||| ||||| |||||||||||||||    
T  13761921 attgactaaaacgacattcattttaaaacgga 13761952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 25362955 - 25362895
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    |||||||||||||||||| |||||||||||| ||||||||||| ||||||||| |||||||    
T  25362955 ttgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttcttttcaatt 25362895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 36073785 - 36073705
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatatta 259  Q
    ||||||| |||||||||||| ||| | ||| |||||||||||||||||||||| |||||||||||  || |||||||||||    
T  36073785 ttgtttctaaatgaatgtcattttaaattttcaatgcaataataactttttcttttcaattgtatcattcaattaatatta 36073705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 288
Target Start/End: Original strand, 4630870 - 4630971
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata--ttacgttaaactacttccaaagtatta 283  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||  ||||||||  ||||   | ||||||||||||||||||    
T  4630870 aaaataaatgtcactttcagttttcaatacaataataactttttcttttcaattgtatcctccaattaatactttac---acactacttccaaagtatta 4630966  T
Q  284 ttttt 288  Q
     ||||    
T  4630967 ctttt 4630971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 27652322 - 27652231
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| |||||||| ||||||| |||  ||||| || ||  | ||| ||||||||||||||||||||||||||||| ||||    
T  27652322 gtaaaattgttatgacatttgactattttattccatttcttaatctgtgtgtaattgcctaaagcgacactcattttaaaacggatgaagta 27652231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 211 - 337
Target Start/End: Complemental strand, 1309481 - 1309356
Alignment:
Q  211 aatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaa 310  Q
    ||||||||||||| ||||||| || || ||||   || |||||||||||  | | ||||||| |||  |||||||||||||||||||| |||||||||||    
T  1309481 aatgcaataataattttttctttttaagtgtacctttcaattaatattatat-acactacttacaacatattattttttctttaatgataaacaaatcaa 1309383  T
Q  311 tagttgattaggctaatttggtaaaat 337  Q
    | |||||||| | ||||||| ||||||    
T  1309382 ttgttgattatgataatttgataaaat 1309356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 21195380 - 21195454
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    ||||||||||| ||||| ||| |||||||||||||||||||| ||||||| ||||||||||  ||| ||||||||    
T  21195380 tttcaaaatgattgtcaatttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaata 21195454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 7579643 - 7579598
Alignment:
Q  285 tttttctttaatgaaaaacaaatcaatagttgattaggctaatttg 330  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  7579643 tttttctttaatgaaaaacaaatcaatagttgattaggataatttg 7579598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 269 - 334
Target Start/End: Complemental strand, 7748963 - 7748898
Alignment:
Q  269 acttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaa 334  Q
    |||| ||||||||||||||||||||||||||||||||| ||||| || |||||  |||||||||||    
T  7748963 actttcaaagtattattttttctttaatgaaaaacaaaccaataattaattagaataatttggtaa 7748898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 416
Target Start/End: Complemental strand, 42329547 - 42329462
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggat 416  Q
    ||||||||| |||||| |||||||||||||||  |||| |||||||| || || |||| |||||||| ||||||||| ||||||||    
T  42329547 gtaaaattgctatgacatttgactactttatttcattccttaatttgtgtgcaattggttaaagcgatactcattttgaaacggat 42329462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 4911305 - 4911225
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatatta 259  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||| |||||||| ||||| ||||  ||| ||| |||||||    
T  4911305 ttgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttcttttcaactgtacccttcaatcaatatta 4911225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 28591681 - 28591641
Alignment:
Q  280 attattttttctttaatgaaaaacaaatcaatagttgatta 320  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28591681 attattttttctttaatgaaaaacaaatcaatagttgatta 28591641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 9066578 - 9066515
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||  |||||| |||| |||||    
T  9066578 ttgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttcttttcatttgta 9066515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 21634196 - 21634266
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||| ||||||| | || |||||||||||    
T  21634196 actacttccaaaatattatttt-tctttaatgaaaaacaaaccaataattgattatgatactttggtaaaat 21634266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 21642443 - 21642513
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||| ||||||| | || |||||||||||    
T  21642443 actacttccaaaatattatttt-tctttaatgaaaaacaaaccaataattgattatgatactttggtaaaat 21642513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 407
Target Start/End: Complemental strand, 793607 - 793531
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcatttt 407  Q
    ||||||||| |||||| || ||||||||||||| |||| |||||||| || || ||||||||| || ||||||||||    
T  793607 gtaaaattgctatgacattggactactttattccattccttaatttgtgtgcaattggctaaaacggcactcatttt 793531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 4833639 - 4833559
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaa 411  Q
    |||||||||||||||| ||| |||||||||||  |||| ||||  |  || || |||||||||||||||||||||||||||    
T  4833639 gtaaaattgttatgacatttaactactttatttcattccttaacatatgtgcaattggctaaagcgacactcattttaaaa 4833559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 358 - 422
Target Start/End: Original strand, 7145025 - 7145089
Alignment:
Q  358 ttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||| |||||||| || || ||||||||||| ||||||||||| ||||||| ||||||    
T  7145025 ttattcaattccttaatttgtgtgcaattggctaaagcaacactcattttgaaacggagggagta 7145089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 29653515 - 29653424
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| |||||||| ||||||  ||||||||||  |  | || ||||||||| ||||||||||||||||| ||| ||||||    
T  29653515 gtaaaattgctatgacatttgactattttatttcattctttaatccgtatgcaattggctaaaacgacactcattttaaaatggagggagta 29653424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 31041932 - 31041970
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataac 224  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  31041932 aaaatgattgtcactttcagtttccaatgcaataataac 31041970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 43584532 - 43584482
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 229  Q
    |||||| ||||||||||||  ||||||||| ||||||||||||||||||||    
T  43584532 ttgttttaaaatgaatgtcgttttcagttttcaatgcaataataacttttt 43584482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 39804203 - 39804166
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgca 216  Q
    |||||||||||||||| |||||||||||||||||||||    
T  39804203 ttgtttcaaaatgaatatcactttcagtttccaatgca 39804166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 36296135 - 36296051
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||||||| ||| || ||||| || ||||||  ||||||||||    || || |||||||||||||||||||||||||||||||    
T  36296135 gtaaaattgctattacatttgattattttatttcattctttaatccatgtgcaattggctaaagcgacactcattttaaaacgga 36296051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 15566486 - 15566452
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||| ||||||    
T  15566486 gctaaagcgacactcattttaaaacggagggagta 15566452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 41645330 - 41645391
Alignment:
Q  275 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||||   ||||||| ||||||    
T  41645330 aaagtattatttt-tctttaatgaaaaacaaaccaatggttgattaaaataatttgataaaat 41645391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 6519218 - 6519185
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttag 168  Q
    ||||| ||||||||||||||||||||||||||||    
T  6519218 tattcattccgttttaaaatgagtgtcgttttag 6519185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 10345095 - 10345132
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  10345095 ttggctaaagcgacactcattttgaaacggagggagta 10345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 27658737 - 27658770
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||||| ||||||||    
T  27658737 ctaaagcgacactcattttaaaacgtatggagta 27658770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 29044737 - 29044700
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  29044737 ttggctaaagcgacagtcattttgaaacggatggagta 29044700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 32963171 - 32963204
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||| |||||||||||||||||||||||||||    
T  32963171 ctaaagtgacactcattttaaaacggatggagta 32963204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 36296297 - 36296330
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||| |||||    
T  36296297 ctaaagcgacactcattttaaaacggatagagta 36296330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 424
Target Start/End: Complemental strand, 39566172 - 39566135
Alignment:
Q  387 ggctaaagcgacactcattttaaaacggatggagtact 424  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  39566172 ggctaaaacgacactcattttaaaatggatggagtact 39566135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 4742433 - 4742469
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagtactt 425  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  4742433 ctaaagcgacactcattttgaaacggagggagtactt 4742469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 422
Target Start/End: Complemental strand, 7144824 - 7144792
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||||||| ||||||||||||||||||||||||    
T  7144824 taaagcgatactcattttaaaacggatggagta 7144792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 14620656 - 14620692
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagt 421  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  14620656 ttggctaaaacgacactcattttgaaacggatggagt 14620692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 2e-82; HSPs: 113)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 5463573 - 5463816
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||| || |||| ||||||||||||     
T  5463573 ttgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttcttttcaattgtacactttaattaatactatgttacactacttccaaaa 5463672  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||  ||||||||||||||  |||| ||||| |      
T  5463673 tattattttttctttaatgaaaaacaaaccaatagttgattaggattatttggtaaaattgttatgacaattgactactttattgcattccttaatatat 5463772  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||||||||||||||||||||||| ||||||||||||||    
T  5463773 gtgcaattggctaaagcgacactcattttgaaacggatggagta 5463816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 142 - 415
Target Start/End: Complemental strand, 32807128 - 32806855
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32807128 tccgtttcaaaatgagtgtcgttttagcctaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 32807029  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| || ||||| || |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| |    
T  32807028 acccttcaaataatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaattgct 32806929  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||| |||||||||||||||| |||| ||||| || || ||  |||||||||||||| ||||||| |||||||    
T  32806928 atgacatttgactactttattccattccttaatatgtgtgcaactggctaaagcgacaatcattttgaaacgga 32806855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 138 - 422
Target Start/End: Original strand, 10842738 - 10843021
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaa 237  Q
    |||||| |||||||||||||||||||||||||         || ||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  10842738 tccttctgttttaaaatgagtgtcgttttagc-caaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaataataacattttcttttcaa 10842836  T
Q  238 ttgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||| |||| |||||||| || |||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||    
T  10842837 ttgtactcttcaattaatactatgttacagtacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattaagataatttggtaaaat 10842936  T
Q  338 tgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || |||||| |||||||||||||||  |||| ||||| |  || || ||| ||||| ||||||||||||| ||||||||||||||    
T  10842937 tgctatgacatttgactactttatttcattccttaatatttgtgcaattgactaaaacgacactcattttgaaacggatggagta 10843021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 49468864 - 49468621
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||  ||| |||||||| ||  ||| |||||||||||||    
T  49468864 ttgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttcttttcaattgtacccttcaattaatactatattacactacttccaaag 49468765  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
     ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||  |||| ||||| ||     
T  49468764 gattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttgactattttatttcattccttaatctgt 49468665  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||||||||||||||||||||||| ||| ||| ||||||    
T  49468664 gtgcaattggctaaagcgacactcattttgaaatggagggagta 49468621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 35848086 - 35847846
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||   || |||||||| || |||| ||||||| |||||    
T  35848086 ttgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacactactttcaaag 35847987  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||   |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||     
T  35847986 tattattttttcttt---gaaaaacaaatcaatagttgattaagataatttggtaaaattgttatgacatttgactactttattcaattccttaatatgt 35847890  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || |||  ||||||||||||||||| |||||||||||||||    
T  35847889 gtgcaattgagtaaagcgacactcatttcaaaacggatggagta 35847846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 142 - 413
Target Start/End: Original strand, 15822995 - 15823266
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    |||||||||||||||| ||||||||||          |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15822995 tccgttttaaaatgagagtcgttttagtcaaaagaatttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 15823094  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||| |    
T  15823095 acccttcaattaatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaaccattagttgattaggataatttggtaaaattgct 15823194  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacg 413  Q
    ||||| ||| |||| ||||||| |||  ||||| || || || ||||||||| ||| |||||||||||||||    
T  15823195 atgacatttaactattttattccatttcttaatatgtgtgcaattggctaaaacgatactcattttaaaacg 15823266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 142 - 415
Target Start/End: Complemental strand, 31491960 - 31491687
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||| ||||||||||||||         |||||||||||||||||||||||||| ||| |||||  ||||||||||||||| |||||||||    
T  31491960 tccgtttcaaaatcagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttcttttcaattgt 31491861  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    || ||| |||||||| || |||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |    
T  31491860 atccttcaattaatactatgttacactactttcaaagtataattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattgct 31491761  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||| |||||||||||||||| |||| | ||| ||  | || || |||||| |||||||||||||||||||||    
T  31491760 atgacatttgactactttattccattcctgaatatgtttgcaatttgctaaaacgacactcattttaaaacgga 31491687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 142 - 423
Target Start/End: Complemental strand, 48025444 - 48025163
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         ||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  48025444 tccgttttaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcgtttcaattgt 48025345  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||  ||||||| |||||| |||||||||||||||| |    
T  48025344 acccttcaattaatactatgttacactacttccaaagtattattttttctttaaagaaaaacaaacaaatagtttattaggataatttggtaaaattgct 48025245  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    |  |  |||||||||||||||| ||||  |||| || || || |||| |||||||||||  ||||||||||||| |||||||    
T  48025244 acaatatttgactactttattccattccataatgtgtgtgcaattggttaaagcgacacctattttaaaacggagggagtac 48025163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 184 - 410
Target Start/End: Original strand, 50094232 - 50094459
Alignment:
Q  184 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatta 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||| || |||| ||||||| |||||||||     
T  50094232 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttacaaagtattg 50094331  T
Q  284 tttt-ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtcc 382  Q
    |||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||  ||| || ||| ||||||||||||||||| ||||| ||||| |    
T  50094332 tttttttctttaatgaaaagcaaaccaatagttgattaggataatttggtaaaattactattacatttaactactttattcaattccttaatatgcgtgc 50094431  T
Q  383 agttggctaaagcgacactcattttaaa 410  Q
    | |||| |||||||||||||||||||||    
T  50094432 aattggttaaagcgacactcattttaaa 50094459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 9915441 - 9915685
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||  ||| |||||||| || |||| ||||||| |||||    
T  9915441 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactacttgcaaag 9915540  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaattt-ggtaaaattgttatgacttttgactactttattcaattctttaatttg 377  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||| |||||||||||||||  |||| ||||| ||    
T  9915541 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttgggtaaaattgctatgacatttgactactttattacattccttaatatg 9915640  T
Q  378 cgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     ||    || |||||| ||||||||||||| ||||||| ||||||    
T  9915641 tgtgttattagctaaaacgacactcattttgaaacggagggagta 9915685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 44108597 - 44108842
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||  ||| |||||||| || |||| | |||||||||||    
T  44108597 ttgttttaaaataaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacaatacttccaaag 44108696  T
Q  279 tattatttt--ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaattt 376  Q
    |||||||||  ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||| |||||||| ||  |||| ||||| |    
T  44108697 tattattttttttctttaatgaaaaacaaaccaatagttgtttaggataatttggtaaaattgttatgacatttaactactttgtttcattccttaatat 44108796  T
Q  377 gcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    | || || |||||||||| | |||||||||| ||||||||||||||    
T  44108797 gtgtgcaattggctaaagtgtcactcattttgaaacggatggagta 44108842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 179 - 413
Target Start/End: Original strand, 15573605 - 15573845
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt----ctcttcaattgtattctttaattaatattacgttaaactacttcc 274  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||  ||| ||||||||||| |||| |||||||||    
T  15573605 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttttttcttttcaattgtacccttcaattaatattatgttagactacttcc 15573704  T
Q  275 aaagtattatttt--ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattcttta 372  Q
    ||| |||||||||  ||||||||||||||||||| |||||| | |||||| |||||||||||||||| ||| || |||||||||||||||| ||||||||    
T  15573705 aaaatattattttttttctttaatgaaaaacaaaccaatagataattaggataatttggtaaaattgctataacatttgactactttattccattcttta 15573804  T
Q  373 atttgcgtccagttggctaaagcgacactcattttaaaacg 413  Q
    ||||| || || ||||||||| ||||| ||||||| |||||    
T  15573805 atttgtgtgcaattggctaaaacgacattcattttgaaacg 15573845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 52125289 - 52125046
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| ||||| |  |||||||||  ||| ||||||||||| |||| |||||||||| ||    
T  52125289 ttgtttcgaaatgaatgtcaatttcagtttccaatgcaataataattttttattctcaattgtacccttcaattaatattatgttacactacttccatag 52125190  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||||| |||||||||||||||| ||||||||||||||  |||||||||||||||| || ||| |||||||||||||||  |||  ||| | ||     
T  52125189 tattattttttgtttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattgctacgacatttgactactttattacatttcttattatgt 52125090  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     | || ||||||||| ||||||||||||||||||||||||||||    
T  52125089 atacaattggctaaaacgacactcattttaaaacggatggagta 52125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 179 - 415
Target Start/End: Complemental strand, 1740794 - 1740557
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||   || |||||||| ||||||| ||||||||||||     
T  1740794 ttgttttaaaatgaatgtcactttcagtttccaatgaaataataactttttattttcaattgtaccattcaattaatactacgttacactacttccaaaa 1740695  T
Q  279 tattatttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttg 377  Q
     |||||||||| ||||||| |||||||||  |||||||||||| | |||||||||||||||||||| || ||||| |||||||||| |||||||||| ||    
T  1740694 cattatttttttctttaataaaaaacaaactaatagttgattatgataatttggtaaaattgttattacatttgagtactttattccattctttaatatg 1740595  T
Q  378 cgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||  | ||||||||| ||||| ||||||| |||||||    
T  1740594 cgtgtaattggctaaaacgacattcattttgaaacgga 1740557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 183 - 362
Target Start/End: Complemental strand, 24611669 - 24611489
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||| ||||||||||  ||| |||||||| || |||| |||||||||||||||||    
T  24611669 ttcaaaatgaatgtcacttttagtttctaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtatt 24611570  T
Q  283 att-ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttatt 362  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  24611569 atttttttctttaatgaaaaacaaaccaatagttgattagggtaatttagtaaaattgttatgacatttgactactttatt 24611489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 143 - 422
Target Start/End: Original strand, 46045936 - 46046214
Alignment:
Q  143 ccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||| | |||||||||||||||||| | ||||||| ||    
T  46045936 ccgttttaaaatgagtgtcgttttag-taaaaaaaattgtttcaaaatgaatgtcactttcagttttcgatgcaataataactttttattttcaattata 46046034  T
Q  243 ttctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtta 342  Q
      |||  ||||||| || |||| ||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||| ||    
T  46046035 cccttcgattaatactatgttacactactttcaaagtattatttattctttaatgaaaatcaaattaatagttgattaggataatttggtaaaattgcta 46046134  T
Q  343 tgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     ||| |||||||||||||||  |||| ||||| |  || || ||||||||| ||||| ||||| | ||||||| ||||||    
T  46046135 cgacgtttgactactttattgtattccttaatatatgtgcaattggctaaaacgacattcattctgaaacggagggagta 46046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 179 - 358
Target Start/End: Original strand, 31798587 - 31798767
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||||| ||   ||||||||||| || |||| |||||||||||||    
T  31798587 ttgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttcttttcaattataccttttaattaatactatgttacactacttccaaag 31798686  T
Q  279 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactt 358  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  31798687 tattatttttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaattgctatgacatttgactactt 31798767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 29567857 - 29568051
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||| ||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29567857 tccgtttcaaaattagtgtcgttttagcaaaaaaaagttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 29567956  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |  ||| |||||||| ||   || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  29567957 acccttcaattaatacta-tatacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 29568051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 179 - 415
Target Start/End: Original strand, 48009008 - 48009244
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||||||| || ||| |||||  ||||||||||||||||||||| ||||||||||   || |||||||| || |||| ||| |||||||||    
T  48009008 ttgttttaaaatgaatggcatttttagtttttaatgcaataataactttttcttttcaattgtaccgttcaattaatactatgttacactgcttccaaag 48009107  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||  |||||  |||||||| ||||||  |||| ||||| ||     
T  48009108 tattattttttctttattgaaaaacaaaccaatagttgattaggataatttggtaaaattactatgatatttgactattttatttcattccttaatatgt 48009207  T
Q  379 gtccagttggctaaagcgacactcattttaaaacgga 415  Q
    || || ||| ||||| ||||||||||||| |||||||    
T  48009208 gtgcaattgactaaaacgacactcattttgaaacgga 48009244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 138 - 337
Target Start/End: Original strand, 27208947 - 27209144
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaa 237  Q
    |||||| ||||||||||||||||| |||||||         ||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||||    
T  27208947 tccttctgttttaaaatgagtgtcattttagc-cagaaaaattgtttcgaaatgaatgtcactttcggtttccaatgcaataataactttttattttcaa 27209045  T
Q  238 ttgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||   || |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27209046 ttgtaccattcaattaatattatat-acactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 27209144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 187 - 422
Target Start/End: Original strand, 25151821 - 25152051
Alignment:
Q  187 aaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattt 286  Q
    ||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||  ||| |||||       |||| |||||||||||||||||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttcttttcaattgtacccttcaattat------gttacactacttccaaagtattattt 25151914  T
Q  287 tttctttaatgaaaaacaaatc-aatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagt 385  Q
    |||||||||||||||| ||| | |||||||||||||  |||||||||||||||  |||||| |||||||||||||||| |||||||||| || || || |    
T  25151915 tttctttaatgaaaaaaaaaaccaatagttgattagtataatttggtaaaattactatgacatttgactactttattctattctttaatctgtgtgcaat 25152014  T
Q  386 tggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||| ||||| |||||| ||||| ||||| ||| ||||    
T  25152015 tggttaaagtgacacttattttgaaacgaatgaagta 25152051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 189 - 425
Target Start/End: Original strand, 34110535 - 34110771
Alignment:
Q  189 atgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttt 288  Q
    |||||||| |||||||||||||||||||||||||||||||||| || |||||||  ||| ||||| |||||  |||  |||||| |||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctttttaattgtacccttcaattattattatcttactctactttcaaagtattattttt 34110634  T
Q  289 tctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttgg 388  Q
    |||||||||||||||||| ||||||||||||||| ||||||| | ||||| ||| | | |||||||||||||||  |||| ||||||||  |  | ||||    
T  34110635 tctttaatgaaaaacaaaccaatagttgattaggataatttgattaaattattacgtcatttgactactttatttcattcattaatttgtatgtaattgg 34110734  T
Q  389 ctaaagcgacactcattttaaaacggatggagtactt 425  Q
    ||||| ||   |||||||| ||||||||||| |||||    
T  34110735 ctaaaacgtttctcattttgaaacggatggaatactt 34110771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 180 - 422
Target Start/End: Complemental strand, 49426565 - 49426329
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagt 279  Q
    ||||||||||| |||||||||  |||||| |||||||||||||| ||||||| ||||| ||||  | | |||||||| || |||| |||||||||||| |    
T  49426565 tgtttcaaaataaatgtcact--cagttttcaatgcaataataattttttcttttcaactgtacccgtcaattaatactatgttacactacttccaaaat 49426468  T
Q  280 attattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcg 379  Q
    ||| ||||||    |||||| |||||| ||||||||||||||| |||||||||||||||| ||| || ||||||||||| |||| |||| ||||| || |    
T  49426467 attttttttt----aatgaagaacaaaccaatagttgattaggataatttggtaaaattgatatcacatttgactacttcattccattccttaatatgtg 49426372  T
Q  380 tccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    | || ||| ||||||||||||||||||| ||||||||||||||    
T  49426371 tgcaattgcctaaagcgacactcattttgaaacggatggagta 49426329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 377
Target Start/End: Original strand, 43759347 - 43759528
Alignment:
Q  196 tcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaa 295  Q
    ||||||||||||| | |||||||||||| ||||||| ||||||||||  ||| |||||||| || |||| |||||||||||| | |||||||||||||||    
T  43759347 tcactttcagttttcgatgcaataataattttttcttttcaattgtacccttcaattaataatatgttacactacttccaaaatgttattttttctttaa 43759446  T
Q  296 tgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttg 377  Q
    |||||||| ||||||||||| |||||| ||||||| |||||||| ||| || |||||||||||||||  |||| ||||||||    
T  43759447 tgaaaaaccaatcaatagttaattaggataatttgataaaattgctattacatttgactactttatttcattccttaatttg 43759528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 186 - 407
Target Start/End: Complemental strand, 46286964 - 46286743
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||| |||||||| |  ||| |||||||| ||  ||| |||| ||  ||||||| |||    
T  46286964 aaaaagaatgtcactttcatttttcaatgcaataataactttttcttttcaattgcacccttcaattaatactatattacactatttttaaagtatcatt 46286865  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagt 385  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||| || |||||| |||| ||||||||||| |||  ||||| || || || |    
T  46286864 ttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaagtgctatgacatttgtctactttattctatttcttaatatgtgtgcaat 46286765  T
Q  386 tggctaaagcgacactcatttt 407  Q
    ||  |||| |||||||||||||    
T  46286764 tgattaaaacgacactcatttt 46286743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 26755181 - 26755338
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||| |    
T  26755181 tccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttcttttcaatt-t 26755279  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaa 300  Q
    |  ||| |||||||| || || | |||||||||||||||||||||||||||||||||||    
T  26755280 acccttcaattaatactatgtcacactacttccaaagtattattttttctttaatgaaa 26755338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 180 - 337
Target Start/End: Complemental strand, 26595221 - 26595065
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagt 279  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||   || |||||||| ||  | | |||| ||||||||     
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttcttttcaattgtaccattcaattaatactatat-acactatttccaaaga 26595123  T
Q  280 attattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||| |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  26595122 attaatttttctttaatgaaaaacaaaccaataattgattaggataatttggtaaaat 26595065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 200 - 362
Target Start/End: Complemental strand, 52066420 - 52066260
Alignment:
Q  200 tttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaa 299  Q
    ||||| ||| ||||||| |||||| ||||||| ||||||||||  ||| |||||||||||  ||| ||||||| ||||| ||| |||||| |||||||||    
T  52066420 tttcaattttcaatgcagtaataa-tttttcttttcaattgtacccttcaattaatattatattacactactttcaaag-atttttttttgtttaatgaa 52066323  T
Q  300 aaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttatt 362  Q
    ||||||||||||||||||||| | |||||||||||||||  ||| || |||||||||||||||    
T  52066322 aaacaaatcaatagttgattaagataatttggtaaaatttctattacatttgactactttatt 52066260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 424
Target Start/End: Complemental strand, 43358391 - 43358122
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnn-ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattg 240  Q
    ||||||||||||||||||||||||||||          ||||||||| |||||| ||||||||| ||| ||||||||||||||| |||| | ||||||||    
T  43358391 tccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaatatgaatatcactttcacttttcaatgcaataataacattttattttcaattg 43358292  T
Q  241 tattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgt 340  Q
    || |||| |||||||| || |||| ||||||||| |||||||||||              |||||  ||||||||||||| | ||||||||||||||||     
T  43358291 tactcttcaattaatactatgttacactacttccgaagtattattt--------------aacaacccaatagttgattaagataatttggtaaaattgc 43358206  T
Q  341 tatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||| |||||||| ||||||  |||| ||||| |  || || ||| ||||| ||||| ||||||||||||| | ||||||||    
T  43358205 tatgacatttgactattttatttcattccttaatatatgtacaattgactaaaacgacattcattttaaaacgaagggagtact 43358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 25561026 - 25560868
Alignment:
Q  179 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaa 277  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||| ||||||| ||||||| ||   || |||||||| ||  | | ||||||||||||    
T  25561026 ttgtttcaaaataaatattacttttcagtttccaatgcaataataattttttcttttcaattatacctttcaattaatactatat-acactacttccaaa 25560928  T
Q  278 gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
     ||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||    
T  25560927 atattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 25560868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 18794694 - 18794538
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||| ||||||| |||||||||| ||||||||||||||||||||| |||| ||| |  ||| |||||||||||  | | ||||||||||||     
T  18794694 ttgttttaaaataaatgtca-tttcagtttcgaatgcaataataactttttcttttcagttgcacccttcaattaatattatat-acactacttccaaaa 18794597  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||| |||||||||||||| ||||||||  |||||||||||||  ||||||||||||||    
T  18794596 tattcttttttctttaatggaaaacaaactaatagttgattagaataatttggtaaaat 18794538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 277 - 411
Target Start/End: Complemental strand, 38530894 - 38530760
Alignment:
Q  277 agtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaattt 376  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| |  ||| |||||||||||||||  |||  ||||| |    
T  38530894 agtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaattgctgcgacatttgactactttatttcatttcttaatct 38530795  T
Q  377 gcgtccagttggctaaagcgacactcattttaaaa 411  Q
    |  |  | |||||||||||||||||||||||||||    
T  38530794 gtatataattggctaaagcgacactcattttaaaa 38530760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 16757347 - 16757194
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||  ||| |||||||| ||   || || |||| |||||    
T  16757347 ttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattcttttcaattgtacccttcaattaatacta-tatacacaactttcaaag 16757249  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||| ||    |||||||||||  |||||||||||||| || |||||||||||    
T  16757248 tattatttttcct----tgaaaaacaaactaatagttgattaggatagtttggtaaaat 16757194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 142 - 302
Target Start/End: Original strand, 46554761 - 46554918
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    |||||||||||||||||||||||||| |         |||||| |||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||    
T  46554761 tccgttttaaaatgagtgtcgttttaac--caaaaaattgttttaaaatgaatgtcaccttcagtttccactgcaataataactttttattttcaattgt 46554858  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaa 302  Q
    |  ||| |||||||| ||   || ||||||||||||||||||||||||||||||| |||||    
T  46554859 acccttcaattaatacta-tatacactacttccaaagtattattttttctttaataaaaaa 46554918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 50249274 - 50249371
Alignment:
Q  145 gttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50249274 gttttaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgta 50249371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 144 - 288
Target Start/End: Complemental strand, 13408453 - 13408309
Alignment:
Q  144 cgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtat 243  Q
    |||||||||||||||||||||||| |         |||||| ||||||||| | ||||||||||| |||||||||||||||||||||| ||||||||||     
T  13408453 cgttttaaaatgagtgtcgttttaccaaaaacaaattgttttaaaatgaattttactttcagttttcaatgcaataataactttttcttttcaattgtac 13408354  T
Q  244 tctttaattaatattacgttaaactacttccaaagtattattttt 288  Q
     ||||| || |||||| |||| ||||||||||||  |||||||||    
T  13408353 cctttagttgatattatgttacactacttccaaatgattattttt 13408309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 216 - 337
Target Start/End: Complemental strand, 31699405 - 31699285
Alignment:
Q  216 aataataactttttctcttcaattgtattctttaattaatattacgttaaac--tacttccaaagtattattttttctttaatgaaaaacaaatcaatag 313  Q
    |||||||| ||||||| ||||||||||  ||| |||||||| ||   |||||  |||||||||| |||||||||||||||||||||||||||| ||||||    
T  31699405 aataataattttttcttttcaattgtacccttcaattaatacta---taaacattacttccaaaatattattttttctttaatgaaaaacaaaccaatag 31699309  T
Q  314 ttgattaggctaatttggtaaaat 337  Q
    ||||||| | ||||||||||||||    
T  31699308 ttgattatgataatttggtaaaat 31699285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 34047426 - 34047325
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnn-ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattg 240  Q
    ||||||||||||||||||||||||||||          |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  34047426 tccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattg 34047327  T
Q  241 ta 242  Q
    ||    
T  34047326 ta 34047325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 142 - 337
Target Start/End: Complemental strand, 2611019 - 2610828
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         ||||||  ||||||||   ||||||||||| |||| ||||||||| ||||||| |||||||||    
T  2611019 tccgttttaaaatgagtgtcgttttagc-aaaaaaaattgttttgaaatgaatacgactttcagttttcaatacaataataattttttcttttcaattgt 2610921  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |   || |||||||||| |  || |||||||||||||||||||||||  |||||||||||| ||| ||| | ||||||||| ||| ||||||||||    
T  2610920 aacattcaattaatatt-ctatacactacttccaaagtattattttt--tttaatgaaaaataaaccaacaattgattaggataacttggtaaaat 2610828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 186 - 337
Target Start/End: Complemental strand, 8895161 - 8895011
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||| ||||| ||||| | |||  |||| |||| ||| ||||||| || |||||||  ||| |||||||||||  | | |||| || |||| |||||||    
T  8895161 aaaataaatgttacttttaatttttaatgtaatagtaaatttttctttttaattgtacccttcaattaatattatat-acactattttcaaaatattatt 8895063  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  8895062 ttttttttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 8895011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 34032233 - 34032170
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  34032233 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgta 34032170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 180 - 337
Target Start/End: Complemental strand, 49900910 - 49900752
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaa-tgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||| ||||| ||||||||||||||||| ||| | ||||||||||||||| | ||||||||||   || |||||||| ||  | | ||||||| |||||    
T  49900910 tgttttaaaataaatgtcactttcagttttcaaatacaataataactttttattttcaattgtacctttcaattaataatatat-acactactttcaaag 49900812  T
Q  279 tattatttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||| |||||| |||||| ||| ||||||||||||||| |||||| |||||||    
T  49900811 tattatttttttctttaaagaaaaataaaccaatagttgattaggataatttagtaaaat 49900752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 50591321 - 50591230
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| ||| |||||||||||| |||| ||||| || || || ||||||||||||||||||||||||||||| ||||||||    
T  50591321 gtaaaattgttatgacattttactactttattccattccttaatctgtgtacaattggctaaagcgacactcattttaaaacgaatggagta 50591230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 180 - 362
Target Start/End: Complemental strand, 7214185 - 7214009
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagt 279  Q
    ||||| ||||| ||||||||||   |||| |||||||||||||| ||||||| || |||| ||  ||| |||||||| || |||| |||| || |||| |    
T  7214185 tgttttaaaataaatgtcactt---gttttcaatgcaataataaatttttctttttaattatacgcttcaattaatactatgttacactattttcaaaat 7214089  T
Q  280 attattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttatt 362  Q
    |||  |||||   |||| |||||||||| |||||||||||||  |||||||||||||||| |||||  |||||||||||||||    
T  7214088 atttcttttt---taattaaaaacaaataaatagttgattagaataatttggtaaaattgctatgatatttgactactttatt 7214009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 186 - 302
Target Start/End: Complemental strand, 33622511 - 33622395
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatta-t 284  Q
    ||||||||||||| ||||  ||| |||||||||||||||||| ||| |||||||||| |||||| ||||||||| | || |||||||| |||||||||      
T  33622511 aaaatgaatgtcattttcgattttcaatgcaataataactttatcttttcaattgtactctttagttaatattatg-tacactacttctaaagtattaca 33622413  T
Q  285 tttttctttaatgaaaaa 302  Q
    ||||||||||||||||||    
T  33622412 tttttctttaatgaaaaa 33622395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 12591235 - 12591172
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  12591235 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgta 12591172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 26352234 - 26352171
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  26352234 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgta 26352171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 28200225 - 28200134
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| |||||| |||||||||||||  ||||| || || || ||||||||||||||||||||||||||||||| ||||||    
T  28200225 gtaaaattgctatgacatttgacaactttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttaaaacggaaggagta 28200134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 44258660 - 44258597
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  44258660 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgta 44258597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 38531450 - 38531349
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| |   ||| |||| ||| || |||| ||||||| |||||    
T  38531450 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatgcccttcaattgatactatgttacactactttcaaag 38531351  T
Q  279 ta 280  Q
    ||    
T  38531350 ta 38531349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 14373610 - 14373506
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctctt 234  Q
    |||||| ||||||||||||||||||||| |||||||        || ||| ||||||||||||| |||||||||||||||||| ||||||||||| | ||    
T  14373610 tattccctccgttttaaaatgagtgtcgctttagctaaaaaaaattattttaaaatgaatgtcattttcagtttccaatgcaacaataactttttatttt 14373511  T
Q  235 caatt 239  Q
    |||||    
T  14373510 caatt 14373506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 25487093 - 25487149
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  25487093 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgta 25487149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 2459155 - 2459246
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| ||||||||||| ||| ||||  ||||| || || || ||||||||||||||||||||||| ||||||| ||||||    
T  2459155 gtaaaattgttatgacatttgactacttcatttaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 2459246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 5225892 - 5225821
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||||| |||| | ||||||||||||||    
T  5225892 actacttccaaagtattactttttctttaatgaaaaataaaccaatagttaattatgataatttggtaaaat 5225821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 14593465 - 14593410
Alignment:
Q  187 aaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgta 14593410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 24483386 - 24483449
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||    
T  24483386 ttgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttcttttcaattgta 24483449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 44557197 - 44557134
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  44557197 ttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttcttttcaattgta 44557134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 49894931 - 49895022
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| |||||||| ||||||| |||| ||||| || || || ||||| ||| ||||||||||||||||| ||||||||||    
T  49894931 gtaaaattgttatgacatttgactattttattccattccttaatctgtgtgcaattggccaaaacgacactcattttaaaatggatggagta 49895022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 49403023 - 49402945
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatatt 258  Q
    ||||||||||| ||| ||  |||||||||||||||||||||||||||||||| |||||||||| |||  ||||||||||    
T  49403023 tgtttcaaaataaatatcgttttcagtttccaatgcaataataactttttcttttcaattgtactctccaattaatatt 49402945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 331 - 424
Target Start/End: Original strand, 22665086 - 22665179
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    ||||||||| |||||  |||||||||||||||| |||| ||||| || || || ||| ||||||||||||||||||||||||||  ||||||||    
T  22665086 gtaaaattgctatgatatttgactactttattccattcgttaatctgtgtgcaattgactaaagcgacactcattttaaaacggtgggagtact 22665179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 40717445 - 40717372
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| ||||  ||| ||||||||    
T  40717445 ttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaactgtacccttcaattaata 40717372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 5854227 - 5854143
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||||||||||||| ||| |||||||||||| |||| ||||| || || || |||||||||| |||||||||||| |||||||    
T  5854227 gtaaaattgttatgacatttaactactttattctattccttaatctgtgtgcaattggctaaagtgacactcattttgaaacgga 5854143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 142 - 290
Target Start/End: Complemental strand, 39477897 - 39477751
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||| ||||||||         |||||| |||||| |||||||||| | |||||||||||||||||| ||||| | |||||||||    
T  39477897 tccgttttaaaatgagtgttgttttagcaaaataaaattgttttaaaatggatgtcacttttaatttccaatgcaataataa-ttttttttttcaattgt 39477799  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttc 290  Q
    |  ||| |||||||| ||   || ||||||||| |||||||||||||||    
T  39477798 acacttcaattaatacta-tatacactacttcctaagtattattttttc 39477751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 5063 - 5134
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||| ||||||||||||||||| | |  |||||||||| ||||||||||||||| ||||||||||||||    
T  5063 actactttcaaagtattattttttcatcagcgaaaaacaaaccaatagttgattaggataatttggtaaaat 5134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 7191360 - 7191202
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||| ||||||||||||  ||| | ||| |||||||||||||||| ||||||| ||   || |||||||| ||  | | |||||||  |||     
T  7191360 ttgttttaaaataaatgtcactttcgattttctatgtaataataactttttcttttcaattatacctttcaattaatactatat-acactacttttaaaa 7191262  T
Q  279 tattatttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||| |||||| |||||| |||  |||||||||||||| ||||||||||||||    
T  7191261 tattatttttttctttaacgaaaaataaacaaatagttgattaggataatttggtaaaat 7191202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 274 - 337
Target Start/End: Complemental strand, 8989698 - 8989635
Alignment:
Q  274 caaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||    
T  8989698 caaaatattattttttctttaatgaaaaacaaaccaatagttgattataataatttggtaaaat 8989635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 320 - 422
Target Start/End: Complemental strand, 11134474 - 11134372
Alignment:
Q  320 aggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatgga 419  Q
    |||||| ||| |||||| ||| ||||| |||||||||||||||| |||| ||||| || || || ||||||||| ||||||||||||| ||| ||| |||    
T  11134474 aggctattttagtaaaactgtcatgacatttgactactttattccattccttaatatgtgtgcaattggctaaaacgacactcattttgaaatggaggga 11134375  T
Q  420 gta 422  Q
    |||    
T  11134374 gta 11134372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 331 - 413
Target Start/End: Complemental strand, 44582781 - 44582699
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacg 413  Q
    |||||||||||||||| |||||||||||||||  |||| ||||| || || || ||  |||||||||||||||||||||||||    
T  44582781 gtaaaattgttatgacatttgactactttatttcattcattaatctgtgtgcaattcactaaagcgacactcattttaaaacg 44582699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 12484781 - 12484673
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||| ||| ||||| || ||||| ||||||||||||||||| ||||| ||||  ||  ||||||||||| |  | |||||||||||||    
T  12484781 ttgtttcaaaatgaatttcattttcatttgccaatacaataataactttttcttttcaactgtaccctccaattaatatta-ggcacactacttccaaag 12484683  T
Q  279 tattattttt 288  Q
    ||||| ||||    
T  12484682 tattactttt 12484673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 30292901 - 30292986
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttt 227  Q
    |||||||||||||||||||||||| | |         |||||| |||||||||| |||||||||||||||||||||||||||||||    
T  30292901 tccgttttaaaatgagtgtcgtttcaaccaaaaaaaattgttttaaaatgaatgccactttcagtttccaatgcaataataacttt 30292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 46271087 - 46271018
Alignment:
Q  269 acttccaaagtattattttttctttaatgaaaaacaaatcaata-gttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||||||| | |||| |||||||||    
T  46271087 acttccaaagtattattttttctttaatgaaaaacaaactaatacgttgattacgataatctggtaaaat 46271018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 27720963 - 27721019
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||| ||||||||||    
T  27720963 aaaatgaatgtcactttcagttttcaatataataataactttttcttttcaattgta 27721019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 9092677 - 9092731
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattag 321  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  9092677 actacttcaaaagtatt-ttttttctttaatgaaaaacaaatcaatatttgattag 9092731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 52024387 - 52024324
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||| ||||| | ||||||||| |||||||||||||| ||||||| ||||||||||    
T  52024387 ttgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttcttttcaattgta 52024324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 24884420 - 24884490
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| | ||||||| ||  ||| ||||||||    
T  24884420 aaaataaatgtcactttcaatttccaatgcaataataactttttattttcaattatacccttcaattaata 24884490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 28538307 - 28538360
Alignment:
Q  284 ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||    
T  28538307 ttttttctttaatgaaaaataaaccaatagttgattatgataatttggtaaaat 28538360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 46271468 - 46271411
Alignment:
Q  181 gtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaat 238  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||| | ||||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataattttttattttcaat 46271411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 337
Target Start/End: Complemental strand, 51244988 - 51244831
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagt 279  Q
    ||||| ||||| || |||||||||| |||| ||| ||||||||||||||||| ||||||||||   || | |||||| ||   || | ||||||||||||    
T  51244988 tgttttaaaataaaagtcactttcactttc-aatacaataataactttttcttttcaattgtacatttcagttaatacta-tatacattacttccaaagt 51244891  T
Q  280 attattt--tttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    | |||||  ||||||| |||||||| ||||||||  |||| |||| |||||| |||||||    
T  51244890 aatattttatttctttgatgaaaaataaatcaatgattgactaggataatttagtaaaat 51244831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 38947653 - 38947696
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataata 222  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  38947653 ttgttttaaaatgaatgtcactttcagtatccaatgcaataata 38947696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 423
Target Start/End: Complemental strand, 13408311 - 13408245
Alignment:
Q  357 tttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    |||||| ||||  |||||||| || || ||||||||| ||||||||||||||||||||| |||||||    
T  13408311 tttatttaatttcttaatttgtgtgcaattggctaaaacgacactcattttaaaacggagggagtac 13408245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 424
Target Start/End: Complemental strand, 84521 - 84428
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||| ||||||| ||  ||| || || ||||||||| ||||| || || || ||| ||||||||||||||||||| |||| |||||||||||    
T  84521 gtaaaagtgttatgtctaatgattatttcattcaattccttaatctgtgtgcaattgactaaagcgacactcattttgaaacagatggagtact 84428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 12851935 - 12851972
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  12851935 ttggctaaagcgacacttattttaaaacggatggagta 12851972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 27720950 - 27720913
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27720950 ttggctaaagcgacactcattttgaaacggatggagta 27720913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 43755205 - 43755270
Alignment:
Q  360 attcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    |||| ||||| |||| || || || ||||||||||||||||||||||||||||||| ||| |||||    
T  43755205 attccattctgtaatctgtgtgcaattggctaaagcgacactcattttaaaacggagggaatactt 43755270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 424
Target Start/End: Complemental strand, 50349860 - 50349767
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||| ||||||| ||  ||| || || |||| |||| |||||||| || || ||||||||||| ||||||||||| ||||||| ||||||||    
T  50349860 gtaaaagtgttatgtctaatgattatttcattccattccttaatttgtgttcaattggctaaagcaacactcattttgaaacggagggagtact 50349767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 407
Target Start/End: Complemental strand, 672285 - 672209
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcatttt 407  Q
    ||||||||| |||||  |||||||||||||||| ||||| |||| || || || |||| |||| |||||||||||||    
T  672285 gtaaaattgatatgatatttgactactttattccattctataatctgtgtgcaattggttaaaacgacactcatttt 672209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 9552358 - 9552269
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| |||||||||||||||  |||| ||||| |  || || ||| ||||  ||||||| ||||||||||||||||||||    
T  9552358 gtaaaattgctatgacatttgactactttatttcattcattaatctatgtacaattgactaa--cgacacttattttaaaacggatggagta 9552269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 407
Target Start/End: Complemental strand, 42650252 - 42650176
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcatttt 407  Q
    ||||||||| |||||| ||||| |||||||||  | |||||||| || || || ||||||||||||||| |||||||    
T  42650252 gtaaaattgctatgacatttgattactttatttcagtctttaatctgtgtgcaattggctaaagcgacattcatttt 42650176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 422
Target Start/End: Complemental strand, 45749443 - 45749411
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||||||||    
T  45749443 taaagcgacactcattttaaaacggatggagta 45749411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 425
Target Start/End: Complemental strand, 254914 - 254821
Alignment:
Q  331 gtaaaattgttatgacttttgactacttta-ttcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    ||||||||| |||||| ||||||||||||| |||| ||||| ||| || ||  | ||| ||||||||||||||||||| ||||||| |||||||||    
T  254914 gtaaaattgctatgacatttgactactttagttcatttctt-aatctgtgtgtaattgactaaagcgacactcattttgaaacgga-ggagtactt 254821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 337
Target Start/End: Original strand, 38947695 - 38947749
Alignment:
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||| |||||||| ||| |||| | ||||||||||||||    
T  38947695 tattttttctttaatgaaaaa-aaatcaatggttaattatggtaatttggtaaaat 38947749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 39125647 - 39125698
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttct 231  Q
    ||||||||||||| ||||| ||| ||||| |||||||||||||| |||||||    
T  39125647 tgtttcaaaatgactgtcattttaagttttcaatgcaataataaatttttct 39125698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 422
Target Start/End: Complemental strand, 40717367 - 40717272
Alignment:
Q  327 tttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||| |||||  |||||||||||||||| ||||  |||| || || || |||  |||| ||||||| ||||||||| ||||| ||||    
T  40717367 tttggtaaaattgctatgatatttgactactttattccattccgtaatatgtgtgcaattgattaaaacgacacttattttaaaatggatgaagta 40717272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 255078 - 255112
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||| ||||||||||||||||||||||||    
T  255078 gctaaagcgatactcattttaaaacggatggagta 255112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 2610992 - 2611026
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||| ||||||||||||||||||||||||||||    
T  2610992 gctaaaacgacactcattttaaaacggatggagta 2611026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 415
Target Start/End: Complemental strand, 6377235 - 6377205
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacgga 415  Q
    |||||||||||||||||||||||||||||||    
T  6377235 ttggctaaagcgacactcattttaaaacgga 6377205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 17919985 - 17920019
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||| ||||||    
T  17919985 gctaaagcgacactcattttaaaacggagggagta 17920019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 34032004 - 34032034
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttag 168  Q
    |||||||||||||||||||||||||||||||    
T  34032004 tccttccgttttaaaatgagtgtcgttttag 34032034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 34047399 - 34047433
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||| ||||||||||||||||||||||||||||    
T  34047399 gctaaaacgacactcattttaaaacggatggagta 34047433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 43929683 - 43929717
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaat 213  Q
    |||||||||||||||||||| ||||||||||||||    
T  43929683 ttgtttcaaaatgaatgtcaatttcagtttccaat 43929717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 44024533 - 44024499
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||| ||||||    
T  44024533 gctaaagcgacactcattttaaaacggagggagta 44024499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 50094215 - 50094181
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||| ||||||||||||||||||||||||||||    
T  50094215 gctaaaacgacactcattttaaaacggatggagta 50094181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 5317489 - 5317522
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttag 168  Q
    |||| |||||||||||||||||||||||||||||    
T  5317489 tatttcttccgttttaaaatgagtgtcgttttag 5317522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 24040973 - 24040936
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  24040973 ttggctaaagcgacactcattttaaaacgtagggagta 24040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 26352035 - 26352002
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| ||||||||||||||||||||||||||||    
T  26352035 ctaaaacgacactcattttaaaacggatggagta 26352002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 34047154 - 34047187
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttag 168  Q
    |||||| |||||||||||||||||||||||||||    
T  34047154 tattccctccgttttaaaatgagtgtcgttttag 34047187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 44557207 - 44557240
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| ||||||||||||||||||||||||    
T  44557207 ctaaagcgaaactcattttaaaacggatggagta 44557240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 49894797 - 49894760
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  49894797 ttggctaaagcgatactcattttaaaacggaaggagta 49894760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 50249301 - 50249264
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||| || ||||||    
T  50249301 ttggctaaagcgacactcattttaaaacagagggagta 50249264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 672428 - 672464
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagt 421  Q
    |||||||||| |||||||||||||||||||| |||||    
T  672428 ttggctaaagtgacactcattttaaaacggagggagt 672464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 11066206 - 11066266
Alignment:
Q  365 attctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    |||| ||||| ||||| || |||  ||||| ||||||||||||||||||||| ||||||||    
T  11066206 attccttaatatgcgtgcaattgattaaagtgacactcattttaaaacggatagagtactt 11066266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 142 - 170
Target Start/End: Original strand, 12002207 - 12002235
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagct 170  Q
    |||||||||||||||||||||||||||||    
T  12002207 tccgttttaaaatgagtgtcgttttagct 12002235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 26252269 - 26252353
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||||||  ||||| ||||||||||| || | |||| ||||| || || || |||| |||||| ||||||||||| |||||||    
T  26252269 gtaaaattgcaatgacatttgactacttaatcccattccttaatctgtgtgcaattggttaaagcaacactcattttgaaacgga 26252353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 4e-77; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 142 - 424
Target Start/End: Original strand, 39463220 - 39463500
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39463220 tccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 39463319  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| ||   || ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| |||||||||||| |    
T  39463320 acccttcaattaatacta-tatacactacttccaaagtattattttttctttaatgaaaaacaaaccaacagttgattaggataa-ttggtaaaattgct 39463417  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    | ||| |||||||||||||||| |||| ||||| || || || ||||||||||||||||||||||| ||||||| ||||||||    
T  39463418 acgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagtact 39463500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 142 - 407
Target Start/End: Original strand, 4989440 - 4989704
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||| |        |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  4989440 tccgttttaaaatgagtgtcgttttag-taaaaaaaattgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttcttttcaattgt 4989538  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |    
T  4989539 acccttcaattaatattatgttacactacttacaaagtattattttttctttaatgaaaaacaaatcaatagttgagtaggataatttgggaaaattgct 4989638  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcatttt 407  Q
    ||||  |||||||||||||||| |||||||||| ||  | || |||| |||||||| |||||||||    
T  4989639 atgatatttgactactttattccattctttaatatgtatgcaattggttaaagcgaaactcatttt 4989704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 40228572 - 40228815
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||   || ||||||||||| |||| | |||||||||||    
T  40228572 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacatttcaattaatattatgttacattacttccaaag 40228671  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||| ||||| |      
T  40228672 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatatat 40228771  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||| |||||  |||||||||||| |||||||| |||||    
T  40228772 gtgcaattgactaaaatgacactcattttgaaacggattgagta 40228815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 187 - 424
Target Start/End: Complemental strand, 31899395 - 31899158
Alignment:
Q  187 aaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattt 286  Q
    ||||| || |||||||||||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||| |||| ||||||||||||||||||| |    
T  31899395 aaatggatatcactttcagtttccaatgcaataataattttttcttttcaattgtactcttcaattaatattatgttacactacttccaaagtattatct 31899296  T
Q  287 tttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagtt 386  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||||||  |||| ||||| |  || || ||    
T  31899295 tttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgttatgacattcgacaactttatttcattccttaatatatgtgcaatt 31899196  T
Q  387 ggctaaagcgacactcattttaaaacggatggagtact 424  Q
    ||||||||||||||||||||| |||  |||||||||||    
T  31899195 ggctaaagcgacactcattttgaaatagatggagtact 31899158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 142 - 422
Target Start/End: Complemental strand, 4760749 - 4760471
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||| ||||||||||||||         |||||| ||||||||||||||||||| |||||||||||| ||||| ||||||| |||||||||    
T  4760749 tccgttttaaaataagtgtcgttttagc-caaaaaaattgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttcttttcaattgt 4760651  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| || |||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||| |    
T  4760650 acccttcaattaatactatgttacactactttcaaagtattattttt-ctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgct 4760552  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| |||||||||||||||  |||| ||||| |  || || ||||||||||||||||||||||||||||||||||||||    
T  4760551 atgacatttgactactttatttcattccttaatctatgtgcaattggctaaagcgacactcattttaaaacggatggagta 4760471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 43448714 - 43448957
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||  ||| |||||||| ||||||| | ||||| |||||    
T  43448714 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttttttttcaattgtacccttcaattaatactacgttacattactttcaaag 43448813  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| |||||| |||||||||||||||  |||| ||||| ||     
T  43448814 tattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgatatgacatttgactactttatttcattcattaatatgt 43448913  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||  | ||| |||||||||||| |||||| ||||||||||||||    
T  43448914 gtgtaattgactaaagcgacacccattttgaaacggatggagta 43448957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 142 - 415
Target Start/End: Original strand, 17920917 - 17921191
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||| ||||||||||||         |||||| ||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  17920917 tccgttttaaaatgaatgtcgttttagcaaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctttacaattgt 17921016  T
Q  242 attctttaattaatattacgttaaactacttccaaagtatta-ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgt 340  Q
    | |||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||     
T  17921017 actcttcaattaatattatgttacactacttccaaagtattatttttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattgc 17921116  T
Q  341 tatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||| |||||||| |||||||||||| ||||| || || || |||||| |||| ||| | ||||| |||||||    
T  17921117 tatgacatttgactattttattcaattccttaatatgtgtgcaattggcttaagcaacattaattttgaaacgga 17921191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 142 - 412
Target Start/End: Complemental strand, 39698857 - 39698588
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39698857 tccgtttcaaaatgagtgtcgttttagc-caaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 39698759  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| || |||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |    
T  39698758 acccttcaattaatactatgttacattacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgct 39698659  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaac 412  Q
    || || |||||||||||||||  || | ||||| || || || ||| |||||| |||||||||||||||||    
T  39698658 ataacatttgactactttatttcataccttaatatgtgtgcaattgcctaaagagacactcattttaaaac 39698588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 142 - 415
Target Start/End: Complemental strand, 9304825 - 9304553
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||  |        |||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||||||||    
T  9304825 tccgttttaaaatgagtgtcgttttaattaaaaaaaattgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttcttttcaattgt 9304726  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| ||||||| ||| |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |    
T  9304725 acccttcaattaatgttatgttatactacttccaaaatattattttttctttaa-gaaaaacaaatcaatagttgattaggataatttggtaaaattgct 9304627  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||| ||| |||| |||||||||||  ||| | || || || |||||||||  ||||||||||||||||||||    
T  9304626 atgacatttaactattttattcaatttcttattatgtgtgcaattggctaaaatgacactcattttaaaacgga 9304553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 142 - 415
Target Start/End: Complemental strand, 9880692 - 9880420
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||| |        ||||||||||||||||||||||  ||||||||||||||||||||| ||||||| ||||||| |    
T  9880692 tccgttttaaaatgagtgtcgttttag-tcaaaaaaattgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttcttttcaattat 9880594  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
       ||| |||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| |    
T  9880593 gcccttcaattaatactatgttacactacttccaaagtattattttttctttaatgaaaaataaatcaatagttgattaggataatttcgtaaaattgct 9880494  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||| |||||| ||||||||| |||  ||||| || || || |||| |||||||||||||||||| |||||||    
T  9880493 atgacatttgaccactttattccatttcttaatctgtgtgcaattggttaaagcgacactcattttgaaacgga 9880420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 186 - 411
Target Start/End: Complemental strand, 43084775 - 43084550
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||   || |||||||| || |||| ||||||||||||  ||||||    
T  43084775 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacactacttccaaaaaattatt 43084676  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagt 385  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||  |||||| |||||||||||||||  |||| ||||| || || || |    
T  43084675 ttttctttaatgaaacacaaaccaatagttgattagggtaatttggtaaaattactatgacatttgactactttatttcattccttaatatgtgtgcaat 43084576  T
Q  386 tggctaaagcgacactcattttaaaa 411  Q
    || |||||| |||||| |||||||||    
T  43084575 tgactaaagtgacacttattttaaaa 43084550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 179 - 408
Target Start/End: Complemental strand, 31693776 - 31693545
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||   || ||||||||||| |||| |||| ||||||||    
T  31693776 ttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaatattatgttacacta-ttccaaag 31693678  T
Q  279 tattattttttctttaatgaaaaacaaatcaata---gttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatt 375  Q
    ||||||||| ||||||||||||||||||  ||||   |||||||||| |||||| |||||||||||||||| |||||||||||||||  |||| ||||      
T  31693677 tattattttatctttaatgaaaaacaaactaataccagttgattaggataatttagtaaaattgttatgacatttgactactttattatattccttaaca 31693578  T
Q  376 tgcgtccagttggctaaagcgacactcatttta 408  Q
    || || |||||||||||||||||| ||||||||    
T  31693577 tgtgtgcagttggctaaagcgacattcatttta 31693545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 145 - 362
Target Start/End: Original strand, 7839422 - 7839639
Alignment:
Q  145 gttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtatt 244  Q
    |||||||||||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||      
T  7839422 gttttaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttcttttcaattttacc 7839521  T
Q  245 ctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatg 344  Q
     || ||||||||||| |||| |||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| | ||||| ||||||||||| |||    
T  7839522 tttcaattaatattatgttacactacttccaaaatattattttttctttaatgaaaaataaaccaatagttgattaagataattcggtaaaattgtcatg 7839621  T
Q  345 acttttgactactttatt 362  Q
    |  |||||||||||||||    
T  7839622 atatttgactactttatt 7839639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 146 - 407
Target Start/End: Complemental strand, 29025934 - 29025676
Alignment:
Q  146 ttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattc 245  Q
    ||||||||||| ||||||||||| |        ||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| ||  |    
T  29025934 ttttaaaatgaatgtcgttttagttaaaaaaaattgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttcttttcaattctaccc 29025835  T
Q  246 tttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatga 345  Q
    || |||||||| || |||| |||   ||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  29025834 ttcaattaatactatgttacact---tccaatgtattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaattgctatga 29025738  T
Q  346 cttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcatttt 407  Q
    | ||||  |||||||||| |||| ||||| || || || |||  |||| |||||||||||||    
T  29025737 catttgtgtactttattctattccttaatatgtgtgcaattgattaaaacgacactcatttt 29025676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 44713495 - 44713715
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||| ||| ||||||| |        |||||| ||||||||| ||||||||| |||||||||||||||||||||||| | ||||||| |    
T  44713495 tccgttttaaaatgattgttgttttaggtaaaaaaaattgttttaaaatgaatatcactttcattttccaatgcaataataacttttttttttcaattat 44713594  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| ||||||||||  |||| ||||||| |||| |||||||||||||||||||||||| |||  |||||||||||| | |||||||||||| ||| |    
T  44713595 acccttcaattaatattgtgttacactactttcaaaatattattttttctttaatgaaaaataaactaatagttgattatgataatttggtaaagttgct 44713694  T
Q  342 atgacttttgactactttatt 362  Q
    ||||| |||||||||||||||    
T  44713695 atgacatttgactactttatt 44713715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 6374412 - 6374568
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||| |||||||||||   || | |||||||||||    
T  6374412 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgta-ccttcaattaatatta-tatacattacttccaaag 6374509  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||    
T  6374510 tattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 6374568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 9812171 - 9812328
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||   || || ||||||||  | | ||||||| |||||    
T  9812171 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttattttcaattgtacctttcaagtaatattatat-acactactttcaaag 9812269  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||  |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  9812270 tacaattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 9812328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 45359049 - 45358892
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||| ||||| ||||| ||| |||||||||||||| ||||||| |||||||||||| || |||||||||||   || |||||||||||||    
T  45359049 ttgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttcttttcaattgtatttttcaattaatatta-tatacactacttccaaag 45358951  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||||||||  ||||||||||||   ||||| ||||||||    
T  45358950 tattattttttctttaatgaaaaacaaactaatagttgattaaaataattcggtaaaat 45358892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 186 - 337
Target Start/End: Original strand, 514879 - 515032
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattac--gttaaactacttccaaagtatta 283  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||| ||||||||||| ||| |||||||| |||    || ||||||||| ||||||||    
T  514879 aaaatgaatgtcactttcaattttcaatgcaataataattttttcttttcaattgtatccttcaattaataatactatatacactacttccgaagtatta 514978  T
Q  284 ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    | |||||| |||||||||||||| ||||||||||||||| ||||||| ||||||    
T  514979 tattttctataatgaaaaacaaaccaatagttgattaggataatttgctaaaat 515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 184 - 337
Target Start/End: Complemental strand, 5295556 - 5295403
Alignment:
Q  184 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatta 283  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||||  ||| |||||||||||   || |||||||||||| |||||    
T  5295556 tcaaaatgaatgtcactttaagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatatta-tatacactacttccaaaatatta 5295458  T
Q  284 -ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
     ||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  5295457 tttttttcattaataaaaaacaaagcaatagttgattaggataatttggtaaaat 5295403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 142 - 337
Target Start/End: Complemental strand, 14234409 - 14234213
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         |||||| ||||||||||||||||| | |||| |||||||||||||  |||| | |||||||||    
T  14234409 tccgttttaaaatgagtgtcgttttagc-aaaaaaaattgttttaaaatgaatgtcacttttaatttctaatgcaataataatatttttttttcaattgt 14234311  T
Q  242 attctttaattaatattac--gttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |  ||||| |||||| |||    || |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| |||||||| |||||    
T  14234310 accctttagttaataatactatatacactacttccaaaatattattttttctttaacgaaaaacaaaccaatagttgattaggataatttggcaaaat 14234213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 142 - 337
Target Start/End: Complemental strand, 34796870 - 34796679
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||| | ||||||| |        ||||||||||||||||||  |||| |||||| ||||||||||||| ||||||| ||||||||     
T  34796870 tccgttttaaaatgagtattgttttagttaaaaagaattgtttcaaaatgaatgttccttttagtttctaatgcaataataattttttcttttcaattga 34796771  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |  ||| |||||||  ||   || |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  34796770 acccttcaattaattata---tacactacttccaaagtattatttttt-tttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 34796679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 19438234 - 19438362
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||| |||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||||  ||| |||||||| ||  ||| ||||||||||||     
T  19438234 ttgtttcgaaataaatgtcactctcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaa 19438333  T
Q  279 ta-ttattttttctttaatgaaaaacaaa 306  Q
    || ||||||||||||||||||||||||||    
T  19438334 tatttattttttctttaatgaaaaacaaa 19438362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 19574384 - 19574512
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttc-caatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaa 277  Q
    ||||||| |||| ||||||||| |||||||| ||||| |||||||||||||||| ||||||||||  ||| |||||||| ||  ||| ||||||||||||    
T  19574384 ttgtttcgaaataaatgtcactctcagtttcgcaatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaa 19574483  T
Q  278 gtattattttttctttaatgaaaaacaaa 306  Q
     ||||||||||||||||||||||||||||    
T  19574484 atattattttttctttaatgaaaaacaaa 19574512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 186 - 337
Target Start/End: Original strand, 34156539 - 34156690
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataacttttt-ctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattat 284  Q
    ||||||||| |||||| | ||||||||||||||||||| ||||| || ||||||||||  ||| |||||||| || || | |||||||||||| ||||||    
T  34156539 aaaatgaatatcacttacggtttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatgt-acactacttccaaaatattat 34156637  T
Q  285 tttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||| |||| |||||||| | ||||||| ||||||    
T  34156638 tttttctttaatgaaaaacaaaccaatggttgattatgataatttgataaaat 34156690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 142 - 337
Target Start/End: Complemental strand, 13368140 - 13367946
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||| |||||| |         |||||||||||||  | ||| | ||| ||||||| ||||||||||| |||||| ||||||||     
T  13368140 tccgttttaaaatgagtgttgttttaaccaaaaaaaattgtttcaaaatgggtatcattatcaatttccaacgcaataataacattttcttttcaattgc 13368041  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |  ||| |||||||||||  | | ||||||||||||||||||||||||||||||||||||| ||| || || ||||||||| |||| |||||||||    
T  13368040 acccttcaattaatattatat-acactacttccaaagtattattttttctttaatgaaaaataaaccagtaattgattaggataatatggtaaaat 13367946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 145 - 321
Target Start/End: Complemental strand, 29312381 - 29312204
Alignment:
Q  145 gttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtatt 244  Q
    |||| ||||||||||||||||||||         |||||| ||||||||||||| |||||||||||||||||||||||||  ||| | |||||||||| |    
T  29312381 gtttcaaaatgagtgtcgttttagcaaaaaaaaattgttt-aaaatgaatgtcattttcagtttccaatgcaataataaccgtttgttttcaattgtact 29312283  T
Q  245 ctttaattaatattacgttaaactacttccaa---agtattattttttctttaatgaaaaacaaatcaatagttgattag 321  Q
    ||| |||||||| ||   || ||||||||  |   |||||||||||||||||||||||||||||| ||||||||||||||    
T  29312282 cttcaattaatacta-tatacactacttcagaagtagtattattttttctttaatgaaaaacaaaccaatagttgattag 29312204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 210 - 363
Target Start/End: Complemental strand, 5790772 - 5790617
Alignment:
Q  210 caatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatttttt--ctttaatgaaaaacaaat 307  Q
    ||||| ||||||| | |||||| ||||||| ||| ||| |||||||||||  ||| ||||||| |||| |||||||||||  || ||||||||| ||||     
T  5790772 caatgtaataatagccttttcttttcaattttatccttcaattaatattatcttacactactttcaaaatattattttttttctctaatgaaaagcaaac 5790673  T
Q  308 caatagttgattaggctaatttggtaaaattgttatgacttttgactactttattc 363  Q
    ||||||||||||||| |||||||||||||||| || ||  |||||||| |||||||    
T  5790672 caatagttgattaggataatttggtaaaattgctacgatatttgactattttattc 5790617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 15160638 - 15160538
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||| ||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15160638 tccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 15160539  T
Q  242 a 242  Q
    |    
T  15160538 a 15160538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 279 - 362
Target Start/End: Complemental strand, 36669849 - 36669766
Alignment:
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttatt 362  Q
    ||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| |||||  |||||||||||||||    
T  36669849 tattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgctatgatatttgactactttatt 36669766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 186 - 337
Target Start/End: Original strand, 13496240 - 13496393
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgt-taaactacttccaaagta---t 281  Q
    ||||||||||| | ||||| ||||||||||||||||||| |||||| ||||||||||   || |||||||| |  || || |||||||||||||||   |    
T  13496240 aaaatgaatgttattttcaatttccaatgcaataataacgttttcttttcaattgtacaattcaattaatact--gtatacactacttccaaagtagtat 13496337  T
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||| || |||||||||| ||||| ||||||||| ||||||||||||||    
T  13496338 tattttttcttgaaagaaaaacaaaccaataattgattaggataatttggtaaaat 13496393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 15750399 - 15750327
Alignment:
Q  266 actacttccaaagtattatttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  15750399 actacttccaaagtattatttttttctttaatgaaaaataaaccaatagttgattaggataatttggtaaaat 15750327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 40399946 - 40399875
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||| |||||||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||    
T  40399946 actactttcaaagtattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 40399875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 35356308 - 35356390
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgtta 264  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||| ||  ||| ||||||||||| ||||    
T  35356308 tttcaaaatgaatatcattttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaatattatgtta 35356390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 39766014 - 39765957
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttca 236  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  39766014 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttca 39765957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 43970118 - 43970049
Alignment:
Q  268 tacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||| ||||||    
T  43970118 tacttctaaagtattattttttctttaataaaagacaaatcaatagttgattaggataatttgataaaat 43970049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 43974943 - 43974886
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  43974943 tttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaatt 43974886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 189 - 335
Target Start/End: Complemental strand, 31234084 - 31233939
Alignment:
Q  189 atgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattcttt-aattaatattacgttaaac--tacttccaaagtattatt 285  Q
    |||||||||||||| |||||  |||||||||||||||| || | ||||||||||| |||| |||||||||||   || ||  |||||| ||| |||||||    
T  31234084 atgaatgtcacttttagtttttaatgcaataataacttctttt-ttcaattgtatcctttcaattaatatta---tatacggtacttctaaattattatt 31233989  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaa 335  Q
    ||| ||||||||||||| ||| ||||||||||||||| | |||| |||||    
T  31233988 tttcctttaatgaaaaataaaccaatagttgattaggatgattttgtaaa 31233939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 37559725 - 37559625
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||| ||||||         |||||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  37559725 tccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatcaatgtcactttcagtttccaatacaataataactttttcttttcaattgt 37559626  T
Q  242 a 242  Q
    |    
T  37559625 a 37559625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 40362433 - 40362493
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  40362433 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaatt 40362493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 200 - 337
Target Start/End: Original strand, 41679338 - 41679467
Alignment:
Q  200 tttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaa 299  Q
    ||||||||| |||| ||||||||||||||||| || |||| ||||||| || |||||         |||||||  ||| |||||||||||||||||||||    
T  41679338 tttcagttttcaatacaataataactttttctttttaattttattcttcaactaatac--------actacttttaaaatattattttttctttaatgaa 41679429  T
Q  300 aaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    || |||| ||||||||||||| | ||||||||||||||    
T  41679430 aatcaaaccaatagttgattatgataatttggtaaaat 41679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 15227565 - 15227725
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||||  || |||||||||||||| | ||||| |||||| |||  ||| |||||||| ||   || || |||| |||||    
T  15227565 ttgtttcaaaatgaatgtcactttcaaatttcaatgcaataataaatgtttcttttcaatggtacacttcaattaatacta-tatacacaactttcaaag 15227663  T
Q  279 tatta---ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||   |||||||||||||||||||||||  |||  ||||||||  ||||||| ||||||    
T  15227664 tattatttttttttctttaatgaaaaacaaactaatgattgattagaataatttgataaaat 15227725  T

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Target: chr8; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 34168215 - 34168124
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||  | ||  | ||||||||||||||||||||||| ||||||| ||||||    
T  34168215 gtaaaattgctatgacatttgactactttattcaattccttaatccgtgtgtaattggctaaagcgacactcattttgaaacggagggagta 34168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 43724379 - 43724443
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataa-ctttttctcttcaattgta 242  Q
    |||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  43724379 ttgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttttttcttcaattgta 43724443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 27416652 - 27416743
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| |||||||||||||||  |||| ||||| ||||| || ||| || ||||||||||||||| |||||||||| ||||    
T  27416652 gtaaaattgctatgacatttgactactttattatattccttaatctgcgtgcaattgactgaagcgacactcatttaaaaacggatgaagta 27416743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 34461585 - 34461494
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| |||||||| ||||||  |||| ||||| || || || ||||||||||||||||||||||| ||||| | ||||||    
T  34461585 gtaaaattgttatgacatttgactattttatttcattccttaatctgtgtacaattggctaaagcgacactcattttgaaacgtaaggagta 34461494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 331 - 417
Target Start/End: Complemental strand, 18673102 - 18673016
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatg 417  Q
    |||||||||||||||| |||||||||||||||  |||  |||||||| ||  | ||||||| ||||||||||||||||||| |||||    
T  18673102 gtaaaattgttatgacatttgactactttatttcatttcttaatttgtgtgtaattggctagagcgacactcattttaaaatggatg 18673016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 6116197 - 6116100
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    ||||||| | ||||||||||||||||||         |||||| ||||||||| |||||||| |||| |||||||||||||||||||||| |||||||    
T  6116197 tccgtttcagaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaatatcactttcggttttcaatgcaataataactttttcttttcaatt 6116100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 396369 - 396305
Alignment:
Q  179 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||| ||||||||||    
T  396369 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttcttttcaattgta 396305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 14541749 - 14541658
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| |||||||||||||||| ||| |||||| ||  | || |||||||||  || ||||||||||||| ||||| ||||    
T  14541749 gtaaaattgttatgacatttgactactttattccattatttaatctgtatgcaattggctaaaatgatactcattttaaaatggatgaagta 14541658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 42179188 - 42179250
Alignment:
Q  275 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||| | |||||| |||||||    
T  42179188 aaagtattattttttctttaatgaaaaacaaactaatagttaattatgataatttagtaaaat 42179250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 337
Target Start/End: Original strand, 43561408 - 43561478
Alignment:
Q  267 ctacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||  ||||||| | ||||||| ||||||    
T  43561408 ctactttcaaagtattattttttctttaatgaaaaataaattaatgattgattaagataatttgataaaat 43561478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 36921362 - 36921418
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||||| ||||||||||    
T  36921362 aaaatgaacgtcactttcaattttcaatgcaataataattttttcttttcaattgta 36921418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 40400124 - 40400068
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||| ||||| |||||||||||||| ||||| ||||||| ||||||||||    
T  40400124 aaaatgaatgtgacttttagtttccaatgcaacaataattttttcttttcaattgta 40400068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 8471408 - 8471499
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| |||||||||||||||  |||  ||||| |  || || ||||||||||||||||||||||| ||||| | ||||||    
T  8471408 gtaaaattggtatgacatttgactactttatttcatttcttaatctatgtgcaattggctaaagcgacactcattttgaaacgaagggagta 8471499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 17655906 - 17655968
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||| ||||| || |||||||| |||||||||||||||||||||| ||||| ||||    
T  17655906 ttgtttcaaaat-aatgttaccttcagttttcaatgcaataataactttttcttttcaactgta 17655968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 40400441 - 40400503
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||| ||||||||||||||||| |||||| |||  |||||||| ||||||| ||||||||||    
T  40400441 tgttttaaaatgaatgtcacttttagtttctaatataataataattttttcttttcaattgta 40400503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 422
Target Start/End: Complemental strand, 8382456 - 8382399
Alignment:
Q  365 attctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||  || || || |||||| ||||||||||||||||||||||||||||    
T  8382456 attctttaatttatgtgcaattagctaaaacgacactcattttaaaacggatggagta 8382399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 44342918 - 44342865
Alignment:
Q  202 tcagtttccaatgcaataataactttttctcttcaattgtattctttaattaat 255  Q
    ||||||||||||  |||||||||||||||| ||||||||||  |||||||||||    
T  44342918 tcagtttccaatataataataactttttcttttcaattgtaccctttaattaat 44342865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 423
Target Start/End: Original strand, 9022545 - 9022637
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    |||||| ||||||| ||  ||| || || |||| ||| |||||| || || || ||||||||| ||||||||||||||||||||| |||||||    
T  9022545 gtaaaagtgttatgtctaatgattaattcattccattttttaatctgtgtgcaattggctaaaacgacactcattttaaaacggagggagtac 9022637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 14541911 - 14541945
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||| ||||||    
T  14541911 gctaaagcgacactcattttaaaacggaaggagta 14541945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 37559698 - 37559732
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||| ||||||||||||||    
T  37559698 gctaaagcgacactcattttgaaacggatggagta 37559732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 43561344 - 43561386
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttt 228  Q
    |||||||||||||| |||||||| |||||||||||||| ||||    
T  43561344 aaaatgaatgtcaccttcagttttcaatgcaataataattttt 43561386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 1774221 - 1774258
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  1774221 ttggctaaagtgacactcattttaaaacggaaggagta 1774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 4530070 - 4530107
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  4530070 ttggctaaaacgacactcattttgaaacggatggagta 4530107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 18673260 - 18673297
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  18673260 ttggctaaaacgacactcattttgaaacggatggagta 18673297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 22699381 - 22699418
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgca 216  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  22699381 ttgtttcaaaatgcatgtcaccttcagtttccaatgca 22699418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 32326670 - 32326637
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||||||||| ||||    
T  32326670 ctaaagcgacactcattttaaaacggatgtagta 32326637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 32414725 - 32414762
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgca 216  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  32414725 ttgtttcaaaatgaatgtcatttttagtttccaatgca 32414762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 365 - 425
Target Start/End: Complemental strand, 8106857 - 8106797
Alignment:
Q  365 attctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    ||||||||||||| || || ||| ||||| ||| ||||||||||||| ||| |||||||||    
T  8106857 attctttaatttgtgtgcaattgactaaatcgatactcattttaaaatggagggagtactt 8106797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 142 - 170
Target Start/End: Original strand, 8382406 - 8382434
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagct 170  Q
    |||||||||||||||||||||||||||||    
T  8382406 tccgttttaaaatgagtgtcgttttagct 8382434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 11168888 - 11168924
Alignment:
Q  386 tggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  11168888 tggctaaagcgacactcattttgaaacggagggagta 11168924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 6e-76; HSPs: 98)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 146 - 422
Target Start/End: Complemental strand, 33194215 - 33193940
Alignment:
Q  146 ttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattc 245  Q
    ||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||||| |||||||||| | || |||||||  |    
T  33194215 ttttaaaatgagtgtcgttttagc-aaaaaaaattgttttaaaatgaatgtcactttcagtttccaatgcaatgataactttttatttttaattgtaccc 33194117  T
Q  246 tttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatga 345  Q
    || ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  33194116 ttcaattaatattatgttacattacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattgttatga 33194017  T
Q  346 cttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    | |||||||||||||||  |||| ||||| || || || ||| ||||||||||||||||||| |||| || ||||||    
T  33194016 catttgactactttatttcattccttaatctgtgtgcaattgactaaagcgacactcattttgaaactgagggagta 33193940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 142 - 422
Target Start/End: Original strand, 51397971 - 51398251
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         |||||||||||| ||||||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  51397971 tccgttttaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaataaatgtcacttttagttttcaatgtaataataactttttcttttcaattgt 51398070  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| || |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  51398071 acccttcaattaatactatgttacactacttccaaaatattattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaattgtt 51398170  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || ||||| |||||||||  |||  ||||| || || || ||||||||||||||||||||||| ||||||| ||||||    
T  51398171 ataacatttgattactttatttcatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 51398251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 142 - 411
Target Start/End: Complemental strand, 45213909 - 45213642
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||| |        |||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  45213909 tccgttttaaaatgagtgtcgttttagttaaaaaa--ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttcttttcaattgt 45213812  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| ||  ||| ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||||| |    
T  45213811 acccttcaattaatactatattacactactttcaaagtattattttttctttaatgaaaagcaaaccaatagttgattagaataatttggtaaaattgct 45213712  T
Q  342 atgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaa 411  Q
    ||||| |||||||||||||||  |||| ||||| || || || |||||||||||||||||||||||||||    
T  45213711 atgacatttgactactttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttaaaa 45213642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 179 - 415
Target Start/End: Complemental strand, 47895496 - 47895260
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||  ||| |||||||| || |||| |||| ||||||||    
T  47895496 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattatacccttcaattaatactatgttacactatttccaaag 47895397  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||| |||||| | |||||||||||||  |||| ||||| ||     
T  47895396 tattattttttctttaatgaaaagcaaacaaatagttgattaggataatttggtaaaattgctatgacatatgactactttatttcattccttaatatgt 47895297  T
Q  379 gtccagttggctaaagcgacactcattttaaaacgga 415  Q
    || || |||||||||||||||||||||||||||||||    
T  47895296 gtgcaattggctaaagcgacactcattttaaaacgga 47895260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 182 - 422
Target Start/End: Original strand, 30431121 - 30431360
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtat 281  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||  ||| |||||||||||  ||| ||||||||||||||||    
T  30431121 tttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtaaccttcaattaatattatattacactacttccaaagtat 30431220  T
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtc 381  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||| ||||| |  ||     
T  30431221 tattttttctctaatgaaaaacaagtcaatagttgattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatctatgtg 30431320  T
Q  382 cagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||  | ||||||  |||||||||||||||||||| ||||||    
T  30431321 caact-gctaaaatgacactcattttaaaacggagggagta 30431360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 179 - 415
Target Start/End: Original strand, 44676219 - 44676455
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||  |||||||| |  |||| |||| ||||||||    
T  44676219 ttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttcttttcaattgtaccctccaattaatactgtgttacactagttccaaag 44676318  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||| |||| ||||| ||     
T  44676319 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacatttaactactttattctattccttaatatgt 44676418  T
Q  379 gtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||  | ||||||||| | ||||||||||| |||||||    
T  44676419 gtgtaattggctaaaacaacactcattttgaaacgga 44676455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 180 - 422
Target Start/End: Original strand, 36460805 - 36461046
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagt 279  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||| |  ||| ||||||||||| |||| ||||||||||||||    
T  36460805 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgcacccttcaattaatattatgttatactacttccaaagt 36460904  T
Q  280 attattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcg 379  Q
    |||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||  |||||  ||| |||||||||||  |||| ||||| |||     
T  36460905 atta-tttttctttgatgaaaaacaaaccaatagttgattaggataatttggtaaaattactatgatatttaactactttatttcattccttaatatgcc 36461003  T
Q  380 tccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    | || || |||||||||||||||||||||||||||| ||||||    
T  36461004 tacatttagctaaagcgacactcattttaaaacggaaggagta 36461046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 38016337 - 38016555
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38016337 tccgtttcaaaatgagtgtcgttttagc-caaagaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgt 38016435  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| || |||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||  |    
T  38016436 ac-cttcaattaatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattact 38016534  T
Q  342 atgacttttgactactttatt 362  Q
    ||||| |||||||||||||||    
T  38016535 atgacatttgactactttatt 38016555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 133 - 422
Target Start/End: Complemental strand, 3153003 - 3152716
Alignment:
Q  133 tctattccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctc 232  Q
    |||| ||| |||||||||||||||||||| |||||||         |||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  3153003 tctactccctccgttttaaaatgagtgtcattttagc-aaaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3152905  T
Q  233 ttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggt 332  Q
    ||||||||||  ||| |||||||| || |||| |||||||||||| |||| | ||||||||||| ||||||||| ||||| ||||||||  ||||| |||    
T  3152904 ttcaattgtacccttcaattaatactatgttacactacttccaaaatattttattttctttaat-aaaaacaaaccaataattgattagaataattgggt 3152806  T
Q  333 aaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||| | |||||||||||||  |||| ||||| || || || |||| |||| |||||||||||||||||| || ||||||    
T  3152805 aaaattgttatgacatctgactactttatttcattccttaatatgtgtgcaattggttaaaacgacactcattttaaaacagagggagta 3152716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 2458005 - 2458249
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||  ||| |||||||| ||  ||| |||||||||||||    
T  2458005 ttgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttctttttaattatacccttcaattaatactatattacactacttccaaag 2458104  T
Q  279 tattatttt-ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttg 377  Q
    |||| |||| ||||||||||||||  ||| ||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||  |||| ||||| ||    
T  2458105 tattgtttttttctttaatgaaaattaaaccaatagttgattaggataatttggtaaaattgctatgacattttactactttattgcattccttaatatg 2458204  T
Q  378 cgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     || || |||||||||| |||||||||||| ||||||| ||||||    
T  2458205 tgtgcaattggctaaagtgacactcattttgaaacggagggagta 2458249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 179 - 413
Target Start/End: Original strand, 11393543 - 11393777
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||  ||| ||||||||  | |||| |||||||||||||    
T  11393543 ttgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaatacaatgttacactacttccaaag 11393642  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||| || |||||||||||||||||||||| ||||||| |||||||||||||   |||||||||||||||| |||  ||||| |      
T  11393643 tattattttttctttaattaataacaaatcaatagttgattaggataatttgataaaattgttatggtatttgactactttattctatttcttaatatat 11393742  T
Q  379 gtccagttggctaaagcgacactcattttaaaacg 413  Q
    || ||  ||  ||||||||||||||||||||||||    
T  11393743 gtacaactgattaaagcgacactcattttaaaacg 11393777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 47137961 - 47138206
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||| ||| ||||| |||||||||||||||||||| | ||||||||||  ||| || ||||| || |||| | ||||||||||     
T  47137961 ttgttttaaaatgaatgtcatttttagttttcaatgcaataataactttttattttcaattgtacccttcaaataatactatgttacagtacttccaaaa 47138060  T
Q  279 tattatttt--ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaattt 376  Q
    |||||||||  |||||||||||||||||||  |||| ||||||||| |||||||||||||||| |||||| |||||||||||||||||||| |||||| |    
T  47138061 tattattttttttctttaatgaaaaacaaacgaataattgattaggataatttggtaaaattgctatgacatttgactactttattcaattatttaatat 47138160  T
Q  377 gcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    | || || ||| |||||| |||||||||||| ||||||||||||||    
T  47138161 gtgtgcaattgactaaagtgacactcattttgaaacggatggagta 47138206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 181 - 415
Target Start/End: Original strand, 38363785 - 38364025
Alignment:
Q  181 gtttcaaaatgaatgtcactttcagtttccaatgcaataataac------tttttctcttcaattgtattctttaattaatattacgttaaactacttcc 274  Q
    |||||||||||||||||||||||||||| |||||||||||||||      ||||| | ||||||||||  ||| |||||||| ||||||| |||||||||    
T  38363785 gtttcaaaatgaatgtcactttcagtttacaatgcaataataacctttttttttttttttcaattgtacccttcaattaatactacgttacactacttcc 38363884  T
Q  275 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaat 374  Q
    |||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||||||||||| |||||| ||||||| |||||||| |||  |||||    
T  38363885 aaagtattattttttctttaatgaaaaacaaaccaacggtttattaggataatttggtaaaattgctatgacatttgactgctttattccattggttaat 38363984  T
Q  375 ttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
     ||  | || ||||||||| |||||||||||||||||||||    
T  38363985 ctgtatgcaattggctaaaacgacactcattttaaaacgga 38364025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 41287651 - 41287405
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaata---ataactttttctcttcaattgtattctttaattaatattacgttaaactacttcca 275  Q
    ||||||||||||||||||||||||| ||||||| |||||||   |||||||||||| ||||||| ||  ||| ||||||||||| |||| | ||||||||    
T  41287651 ttgtttcaaaatgaatgtcactttcggtttccagtgcaatactaataactttttcttttcaattatacccttcaattaatattatgttacattacttcca 41287552  T
Q  276 aagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttat-tcaattctttaat 374  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||| |||||| ||||||| |||| || |||||    
T  41287551 aagtatttttttttctttaatgaaaaagaaaccaatagttgattaggataatttggtaaaattgctatgacatttgaccactttatctcaa-tccttaat 41287453  T
Q  375 ttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
     || ||  | ||||||||||||||||||||||| ||||||| ||||||    
T  41287452 atgtgtgtaattggctaaagcgacactcattttgaaacggagggagta 41287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 179 - 421
Target Start/End: Complemental strand, 31853714 - 31853472
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||| ||||||||||| |||||||| | ||||||||| ||||||| ||  ||||||  ||| |||||||| || |||| ||||||| |||||    
T  31853714 ttgtttcaaaataaatgtcacttttagtttccagtacaataataattttttcttttttattgtacccttcaattaatactatgttacactactttcaaag 31853615  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||  |||||||||| |      
T  31853614 tattattttttctttaatgaaagacaaaccaatagttgattaggataatttgataaaattgttatgacatttgactattttatttcattctttaatctaa 31853515  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagt 421  Q
    || || |||| |||||||||| ||||||||||| ||| |||||    
T  31853514 gtgcaattggttaaagcgacattcattttaaaatggagggagt 31853472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 179 - 422
Target Start/End: Original strand, 41850388 - 41850622
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||| |||| |||||||          
T  41850388 ttgttttaaaatgaatgacacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactactt------ 41850481  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
     ||| |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||| ||||| ||     
T  41850482 -att-ttttttctttaatgaaaa-caaaccaatagttgattaggataatttggtaaaattgttatgacatttgactactttatttcattccttaatatgt 41850578  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    || || || ||||||||| |||||||||| ||||||||||||||    
T  41850579 gtgcaattagctaaagcgccactcattttgaaacggatggagta 41850622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 179 - 415
Target Start/End: Complemental strand, 23525468 - 23525232
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||| ||||| |||||   |||||||||||||||||| ||||||| ||||| | ||  ||| |||||||| || |||| | |||||||||||    
T  23525468 ttgttttaaaataaatgttacttttgatttccaatgcaataataagtttttcttttcaactatacccttcaattaatactatgttacattacttccaaag 23525369  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||  ||| ||||| ||     
T  23525368 tattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaattgttatgacatttgactactttattcccttccttaatatgt 23525269  T
Q  379 gtccagttggctaaagcgacactcattttaaaacgga 415  Q
    || || ||||||||| |||||||||| || |||||||    
T  23525268 gtgcaattggctaaaacgacactcatattgaaacgga 23525232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 53200832 - 53200590
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||   || ||||||||||| |||| ||||||| |||||    
T  53200832 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgtaca-ttcaattaatattatgttacactactttcaaag 53200734  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    || ||||||||| |||||||||| ||||  |||||||||||||| |||||||||||||||| |||||| |||||||||||||||  |||||||||| |      
T  53200733 tactattttttccttaatgaaaagcaaactaatagttgattaggataatttggtaaaattgctatgacatttgactactttatttcattctttaatcttt 53200634  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||  | ||| |||||| | |||||||||| ||||||| ||||||    
T  53200633 gtgtaattgactaaagtggcactcattttgaaacggagggagta 53200590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 138 - 415
Target Start/End: Complemental strand, 50088509 - 50088232
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaa 237  Q
    ||||||||||| ||||||||||||||||||||         |||||| |||||||| |||||||| |||||||||||||||| ||||||||||| |||||    
T  50088509 tccttccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttcttttcaa 50088410  T
Q  238 ttgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||  ||| |||||||| || |||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| | |||||||||||| |    
T  50088409 ttgtacccttcaattaatactatgttacactactttcaaagtattaatttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaagt 50088310  T
Q  338 tgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||  ||||  ||||| |||||||| | |||| ||||| |  || || | || ||||||||| ||||| ||||||||||    
T  50088309 tgccatgatatttgagtactttatcccattccttaatatatgtgcaatgggttaaagcgacgctcatcttaaaacgga 50088232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 179 - 374
Target Start/End: Complemental strand, 30426476 - 30426280
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||  ||| |||||||| || |||| ||||||||||||     
T  30426476 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctttttaattgtacccttcaattaatactatgttacactacttccaaaa 30426377  T
Q  279 ta-ttattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaat 374  Q
    || || ||||||||| ||||||||||||| ||||||||||||| | |||||||||||||||| |||||| |||||||||| ||||| |||| |||||    
T  30426376 tattttttttttcttcaatgaaaaacaaaccaatagttgattaagataatttggtaaaattgctatgacatttgactactatattccattccttaat 30426280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 135 - 337
Target Start/End: Complemental strand, 36844938 - 36844737
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctctt 234  Q
    |||||| |||||||||||||||||||||||||| |         |||||||||||  ||||||||||||||||| |||||||||||||| ||||||| ||    
T  36844938 tattccctccgttttaaaatgagtgtcgttttaacaaaaaataattgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttctttt 36844839  T
Q  235 caattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaa 334  Q
    |||||||||  || |||||||||||  | | ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||    
T  36844838 caattgtatcattcaattaatattatat-acactacttccaaagtattatgttttctttaatgaaaaactaatcaatagttgattaggataatttggtaa 36844740  T
Q  335 aat 337  Q
    |||    
T  36844739 aat 36844737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 142 - 422
Target Start/End: Complemental strand, 35557947 - 35557662
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||| |||||          |||||| |||||  || |||||||||||||||||||||||||||| ||||||| |||||||||    
T  35557947 tccgttttaaaatgagtgtcgatttaggaaaaaaaaattgttttaaaatatatatcactttcagtttccaatgcaataataattttttcttttcaattgt 35557848  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattag-----gctaatttggtaaaa 336  Q
    |   || ||||| || || |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||     | |||||||||||||    
T  35557847 acctttcaattattactatgttacactacttccaaagtattattttttctttaatgaaaaataaaccaatagttgattaggatatgataatttggtaaaa 35557748  T
Q  337 ttgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||| |||||| ||||| ||||||||| ||||| ||||| || || ||  |||||||| ||||| | ||||| ||||||| ||||||    
T  35557747 ttgctatgacatttgattactttatttaattcattaatctgtgtgcaaatggctaaaacgacatttattttgaaacggagggagta 35557662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 186 - 422
Target Start/End: Complemental strand, 33024445 - 33024210
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| |   || ||||||||||| |||| ||| ||| ||| ||||||||    
T  33024445 aaaatgaatgttactttcagtttccaatgcaataataactttatcttttcaattgcaccattcaattaatattatgttacactgctttcaacgtattatt 33024346  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagt 385  Q
    | |||||||||| |||||||||||||||||||||| | ||||||| |||||||| || ||  || |||||||||||||||||| |||||||| || || |    
T  33024345 tcttctttaatggaaaacaaatcaatagttgattaagataatttgataaaattgctacgatattcgactactttattcaattccttaatttgtgtgcaat 33024246  T
Q  386 tggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||| | | | ||||||| ||||||| ||||||    
T  33024245 tggctaaaac-atattcattttgaaacggagggagta 33024210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 179 - 355
Target Start/End: Complemental strand, 32492333 - 32492158
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||| ||   || |||||||| |  |||| ||||||||||||     
T  32492333 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattataccattcaattaatactttgttacactacttccaaaa 32492234  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgacta 355  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||| ||||||| ||||||||||||||  ||||||||    
T  32492233 tattattttttctttaat-aaaaaaaaatcaataattgattaggataatttgataaaattgttatgatatttgacta 32492158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 184 - 315
Target Start/End: Complemental strand, 36729957 - 36729826
Alignment:
Q  184 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatta 283  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||  ||| ||||||||||| |||| | ||||||||||||||||    
T  36729957 tcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacattacttccaaagtatta 36729858  T
Q  284 ttttttctttaatgaaaaacaaatcaatagtt 315  Q
    |||||| |||||||||||||||| ||||||||    
T  36729857 ttttttatttaatgaaaaacaaaccaatagtt 36729826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 261 - 423
Target Start/End: Original strand, 39359000 - 39359162
Alignment:
Q  261 gttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactacttta 360  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  39359000 gttacactacttctaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgacatttgactacttta 39359099  T
Q  361 ttcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    ||  |||| |||||||   | || ||| ||||| ||||||||||||| ||||| || ||||||    
T  39359100 tttcattccttaatttatatacaattgactaaaacgacactcattttgaaacgaatagagtac 39359162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 19373547 - 19373741
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    |||||||||||||||||||| |||||| |        |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| | |||||||||    
T  19373547 tccgttttaaaatgagtgtcattttagttaaaaaaaattgtttcaaaatgactgtcactttcaattttcaatgaaataataactttttattttcaattgt 19373646  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |  ||| ||||||||| |  | | |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  19373647 acccttcaattaatatcatat-acactacttccaaagttttattttttctttaatgaaaaacaaaccaatagttgattaggagaatttggtaaaat 19373741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 30315307 - 30315465
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactac-ttccaaa 277  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||| ||  ||| |||||||| ||   || ||||| ||| |||    
T  30315307 ttgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttcttttgaattatacccttcaattaatacta-tatacactactttcaaaa 30315405  T
Q  278 gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  30315406 gtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 30315465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 210 - 417
Target Start/End: Original strand, 45566828 - 45567032
Alignment:
Q  210 caatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatca 309  Q
    |||| ||||||||||||||||| |||||||||||  || |||||||| ||  ||| | |||||  ||| |||| ||||||||||||||||||||||| ||    
T  45566828 caatacaataataactttttcttttcaattgtatcattcaattaatactatattacattacttttaaaatattgttttttctttaatgaaaaacaaacca 45566927  T
Q  310 atagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaa 409  Q
    || |||||||||| |||||||||||||||| |||||| |||||||||||||||  |   |||||| |  || || |||||||||  ||||||||||||||    
T  45566928 atggttgattaggataatttggtaaaattgctatgacatttgactactttattaca---tttaatctatgtgcaattggctaaaatgacactcattttaa 45567024  T
Q  410 aacggatg 417  Q
    ||||||||    
T  45567025 aacggatg 45567032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 42071983 - 42072140
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||| |||||| ||| |||||||||||||||||||||||||||| ||||| ||||  ||| |||||||||||  | | | |||||| ||||    
T  42071983 ttgttttaaaatggatgtcatttttagtttccaatgcaataataactttttcttttcaactgtacccttcaattaatattatat-acattacttctaaag 42072081  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||| |||||||||||| |||||||||||||||||||||| | |||||| |||||||    
T  42072082 tattatgttttctttaatggaaaacaaatcaatagttgattatgataatttagtaaaat 42072140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 48903284 - 48903441
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  ||  |||||||| ||   || |||| || || ||    
T  48903284 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatacta-tatacactaatttcatag 48903382  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||| ||||||||| |||||||||||||   ||||||| ||||||    
T  48903383 tattattttttctttaattaaaaacaaagcaatagttgattaaaataatttgataaaat 48903441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 337
Target Start/End: Original strand, 38140949 - 38141105
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| | ||  |||||   ||| |||||||| ||  | | |||||||||||| |    
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttttttttcattgtgcccttcaattaatactatat-acactacttccaaaat 38141047  T
Q  280 attattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    || |||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  38141048 ataattttttctttaatgaaaaacaaaccaataattgattagaataatttggtaaaat 38141105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 179 - 320
Target Start/End: Original strand, 48901718 - 48901858
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  ||  |||||||| ||   || |||| || || ||    
T  48901718 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatacta-tatacactaatttcatag 48901816  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgatta 320  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  48901817 tattattttttctttaattaaaaacaaagcaatagttgatta 48901858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 150 - 337
Target Start/End: Complemental strand, 30934987 - 30934804
Alignment:
Q  150 aaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattcttta 249  Q
    |||||||||||||||||||||        |||||| |||||||||||||   |||||||||||||||||||||| ||||||| ||||||||||  | | |    
T  30934987 aaaatgagtgtcgttttagctaaaaaaaattgttttaaaatgaatgtca---tcagtttccaatgcaataataattttttcttttcaattgtacccctca 30934891  T
Q  250 attaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||| ||  | | |||||||| ||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||||| ||||||    
T  30934890 attaatactatat-acactacttctaaagtattattttatctttaatgaaaaacaaaccaatatttgattatgataatttgataaaat 30934804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 142 - 312
Target Start/End: Original strand, 4392157 - 4392326
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||  |||||||||||||||| |||||||||    
T  4392157 tccgttttaaaatgagtgtcgttttagcaaaaaataattgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttcttttcaattgt 4392256  T
Q  242 attctttaattaatattacgttaaactacttcc-aaagtattattttttctttaatgaaaaacaaatcaata 312  Q
    |  ||| |||||||| ||   || ||||||||| ||||||||||||| | |||||| |||||||||||||||    
T  4392257 acccttcaattaatacta-tatatactacttccaaaagtattattttct-tttaataaaaaacaaatcaata 4392326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 186 - 337
Target Start/End: Complemental strand, 9189580 - 9189430
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| ||||| | |||  || |||||||| ||  | | | |||||||||| |||||||    
T  9189580 aaaatgaatgtcactttcagttttcaatgaaataataactttttcttttcaaatatatcattcaattaatactatat-acattacttccaaaatattatt 9189482  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||| ||||||||| ||||||||||||| | | ||||||||||||    
T  9189481 ttttctttaataaaaaacaaaccaatagttgattacgatgatttggtaaaat 9189430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 234 - 422
Target Start/End: Complemental strand, 13756970 - 13756786
Alignment:
Q  234 tcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggta 333  Q
    |||||||||  ||| ||||||||||| |||| | |||||  |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| ||    
T  13756970 tcaattgtacccttcaattaatattatgttacattacttttaaagtattattttttctttaataaaaaacaaaccaatagttgattaggataatttgcta 13756871  T
Q  334 aaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||| ||  || ||||||||||||||||    | |||||||| ||  | ||  ||||| |||| |||||||| ||||||||||||||    
T  13756870 aaattgctacaacatttgactactttattc----cgttaatttgtgtgtaattaactaaaacgacgctcattttgaaacggatggagta 13756786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 182 - 337
Target Start/End: Original strand, 40487829 - 40487983
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtat 281  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||   || |||||||| ||   || |||||||| |||||||    
T  40487829 tttcaaaatgaatgtcacttttgatttccaatgcaataataactttttcttttcaattgtacctttcaattaatacta-tatacactacttctaaagtat 40487927  T
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||  ||||||||||| ||||||||||||   ||||||| ||||||    
T  40487928 tattttttctttatcgaaaaacaaattaatagttgattataataatttgataaaat 40487983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 256
Target Start/End: Complemental strand, 50646303 - 50646185
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaa 237  Q
    |||||||||||||||||||||||||||||| |         |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  50646303 tccttccgttttaaaatgagtgtcgttttaacaaaaaaaaattgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaa 50646204  T
Q  238 ttgtattctttaattaata 256  Q
    |||||   |||||||||||    
T  50646203 ttgtaccatttaattaata 50646185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 180 - 329
Target Start/End: Complemental strand, 7231047 - 7230897
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattac--gttaaactacttccaaa 277  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||  || |||||||| |||    || |||||||| |||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttcttttcaattgtatcattcaattaatactactatatacactacttcgaaa 7230948  T
Q  278 gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaattt 329  Q
     ||||| |||||||||||||| ||| ||| ||||||||||||||| ||||||    
T  7230947 ttatta-tttttctttaatgagaaagaaaccaatagttgattaggataattt 7230897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 298 - 419
Target Start/End: Complemental strand, 36729805 - 36729684
Alignment:
Q  298 aaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcga 397  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| |||  ||||| || || || ||||||||| |||    
T  36729805 aaaaacaaaccaatagttgattaggataatttggtaaaattgttatgatatttgactactttattccattacttaatatgtgtgcaattggctaaaacga 36729706  T
Q  398 cactcattttaaaacggatgga 419  Q
    | |||||||| |||| ||||||    
T  36729705 cgctcattttgaaacagatgga 36729684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 274 - 367
Target Start/End: Complemental strand, 45518541 - 45518448
Alignment:
Q  274 caaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaatt 367  Q
    |||||||||| |||||||||||||||||| | ||||||| ||||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  45518541 caaagtattaatttttctttaatgaaaaatatatcaataattgattaggataatttgataaaattgttatgacatttgactattttattcaatt 45518448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 210 - 422
Target Start/End: Original strand, 51481964 - 51482177
Alignment:
Q  210 caatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatca 309  Q
    |||||||||||||| ||||||  ||||||| ||   |||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||  ||||     
T  51481964 caatgcaataataattttttcatttcaattataccttttaattaatattatgttacattacttccaaagcattattttttctttaatgaaaaaataatct 51482063  T
Q  310 atagttgattaggctaatttggtaaaattgtta-tgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcatttta 408  Q
     | ||| |||||| ||||||| |||||||| || | |  |||||||||||||||  |||| ||||| || ||  | |||  |||| ||||||||||||||    
T  51482064 tttgtttattaggataatttgataaaattgctactaatatttgactactttatttcattccttaatctgtgtgtaattgtttaaaacgacactcatttta 51482163  T
Q  409 aaacggatggagta 422  Q
    |||| || ||||||    
T  51482164 aaacagaaggagta 51482177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 337
Target Start/End: Original strand, 8817139 - 8817296
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaa-actacttccaaag 278  Q
    ||||| ||||||||||| | ||||||||  |||||||||||||| |||||| |||||||||||   ||||||||||||    |  | |||||||| || |    
T  8817139 tgttttaaaatgaatgttattttcagttatcaatgcaataataattttttc-cttcaattgtaccttttaattaatatattatacacactacttctaatg 8817237  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||    
T  8817238 tattattttttctttaatgaaaaataaatcaatagttgattagaataatttgataaaat 8817296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 233 - 363
Target Start/End: Complemental strand, 36381472 - 36381340
Alignment:
Q  233 ttcaattgtattctttaattaatattacgttaaactacttccaaagtattattt--tttctttaatgaaaaacaaatcaatagttgattaggctaatttg 330  Q
    ||||||||||| ||| |||||||| ||  ||| | |||||  |||||||||| |  ||| ||||||||||||||||||||||| |||||| | |||||||    
T  36381472 ttcaattgtatccttcaattaatactatattacattacttttaaagtattatatattttttttaatgaaaaacaaatcaatagatgattaagataatttg 36381373  T
Q  331 gtaaaattgttatgacttttgactactttattc 363  Q
    ||||||||| |||||| ||||||||||||||||    
T  36381372 gtaaaattgctatgacatttgactactttattc 36381340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 42571718 - 42571618
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||| ||||||         ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  42571718 tccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttcttttcaattgt 42571619  T
Q  242 a 242  Q
    |    
T  42571618 a 42571618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 50038360 - 50038260
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||| ||||||         |||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  50038360 tccgttttaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgt 50038261  T
Q  242 a 242  Q
    |    
T  50038260 a 50038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 54933206 - 54933110
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtacttgt 427  Q
    |||||||||||||||| |||||||||||||||  |||| ||||| |  || || |||||||||||||||||||||||||||||||||||||| ||||    
T  54933206 gtaaaattgttatgacatttgactactttatttcattccttaatatatgtgcaattggctaaagcgacactcattttaaaacggatggagtatttgt 54933110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 179 - 302
Target Start/End: Original strand, 22857088 - 22857210
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||||||||||||||  ||| ||||| |||||||||||||||| |||||||||| | || |||||||||||   || |||||||| |||     
T  22857088 ttgttttaaaatgaatgtcactttcgattttcaatgtaataataactttttcttttcaattgtactgttcaattaatatta-tatacactacttctaaaa 22857186  T
Q  279 tattattttttctttaatgaaaaa 302  Q
    |||||||||||||||||| |||||    
T  22857187 tattattttttctttaataaaaaa 22857210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 280 - 411
Target Start/End: Complemental strand, 45392008 - 45391878
Alignment:
Q  280 attattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcg 379  Q
    ||||||||||||| |||||||||||  | |||||||||||| | |||||||||||||||| |||||| ||||| ||||||||||  || |||||| || |    
T  45392008 attattttttcttaaatgaaaaacagtt-aatagttgattatgataatttggtaaaattgctatgacatttgattactttattcctttgtttaatatgtg 45391910  T
Q  380 tccagttggctaaagcgacactcattttaaaa 411  Q
      || ||||||||| |||||||||||||||||    
T  45391909 cgcaattggctaaaccgacactcattttaaaa 45391878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 50346624 - 50346780
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||| | ||||||| ||| ||||| ||||||||||||| | |||||| ||||||||||  ||| ||| |||| ||  | | | |||||||||      
T  50346624 ttgtttcaaactaaatgtcattttgagttttcaatgcaataata-cattttcttttcaattgtacccttcaatcaataataaat-acattacttccaaca 50346721  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||||||| ||||||    
T  50346722 tattattttttctttaatgaaaaacaaatcaatagttaattaagataatttgataaaat 50346780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 19115385 - 19115445
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  19115385 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaatt 19115445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 54261567 - 54261658
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| ||||||||||||||||||||  ||||| || ||  | ||||||||||||||||||||||| ||||||| ||||||    
T  54261567 gtaaaattgttatgacatttgactactttattcaatttcttaatctgtgtgtaattggctaaagcgacactcattttgaaacggagggagta 54261658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 4758952 - 4759052
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||| |||||          |||||| ||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4758952 tccgttttaaaatgagtgtcgctttagtaaaaagaaattgttttaaaataaatgtcactttcactttccaatgcaataataactttttcttttcaattgt 4759051  T
Q  242 a 242  Q
    |    
T  4759052 a 4759052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 331 - 423
Target Start/End: Complemental strand, 20512497 - 20512405
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    ||||||||| |||||| |||||||| |||||||||||  ||||| || || || ||| ||||||||||||||||||||||||||| |||||||    
T  20512497 gtaaaattgctatgacatttgactattttattcaatttcttaatctgtgtgcaattgactaaagcgacactcattttaaaacggagggagtac 20512405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 207 - 335
Target Start/End: Original strand, 27067634 - 27067759
Alignment:
Q  207 ttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaa 306  Q
    ||||||||||||||||||||||||| ||||||||||  ||| |||||||| ||| | | || |||| ||||   |||||||| |||||||||||| ||||    
T  27067634 ttccaatgcaataataactttttcttttcaattgtacccttcaattaatactacat-acacaactttcaaaactttattttt-ctttaatgaaaa-caaa 27067730  T
Q  307 tcaatagttgattaggctaatttggtaaa 335  Q
     ||||||||||||||| ||||||||||||    
T  27067731 ccaatagttgattaggataatttggtaaa 27067759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 142 - 274
Target Start/End: Original strand, 39356846 - 39356978
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||| ||||||||| |        |||||| ||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  39356846 tccgtttcaaaatgagtatcgttttagttaaaaaaaattgttttaaaataaatgtcactttcagttttcaatgcaataataacattttcttttcaattgt 39356945  T
Q  242 attctttaattaatattacgttaaactacttcc 274  Q
    |   || |||||||| || |||| |||||||||    
T  39356946 acctttcaattaatactatgttacactacttcc 39356978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 31583624 - 31583523
Alignment:
Q  141 ttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattg 240  Q
    ||||||||||||||||||||||||||||          |||||| ||||| |||||||||||||||||||| |||||||||||  |||||| ||||||||    
T  31583624 ttccgttttaaaatgagtgtcgttttagtaaaaaaaaattgttttaaaattaatgtcactttcagtttccagtgcaataataatcttttcttttcaattg 31583525  T
Q  241 ta 242  Q
    ||    
T  31583524 ta 31583523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 42886749 - 42886809
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||||||| |||||||    
T  42886749 ttgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttcttttcaatt 42886809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 39168802 - 39168872
Alignment:
Q  277 agtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgact 347  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||| ||||||| |||||||  |||||||    
T  39168802 agtattattttttttttaatgaaaaacaaattaatagttaattaggataatttgataaaattactatgact 39168872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 23208441 - 23208391
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttct 231  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  23208441 ttgtttcaaaatgaatgtcactttcagtttccaa--caataataactttttct 23208391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 2988611 - 2988527
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||||||| |||||| |||||||||||||||| |||| |||||    || || ||||||||||||||||||||||| |||||||    
T  2988611 gtaaaattgctatgacatttgactactttattccattccttaatccatgtgcaattggctaaagcgacactcattttgaaacgga 2988527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 333 - 415
Target Start/End: Original strand, 49470926 - 49471008
Alignment:
Q  333 aaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    ||||||| |||||| |||||||| ||||||||||||||||||||| || || ||   |||| ||| |||||||||||||||||    
T  49470926 aaaattgctatgacatttgactattttattcaattctttaatttgtgtgcaattatttaaaacgatactcattttaaaacgga 49471008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 47823603 - 47823526
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    |||||| ||||| ||||||| ||| |||||  ||||||||||||| ||||||| || |||||||||||| ||||||||    
T  47823603 ttgttttaaaataaatgtcatttttagtttttaatgcaataataattttttctttttaattgtattcttcaattaata 47823526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 37225786 - 37225726
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcacttt 202  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  37225786 tccgttttaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaatgaatgtcacttt 37225726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 43687884 - 43687800
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||||||||||||| |||||||||||||||| |||| |||||  | || || ||| ||||| ||||||| ||||| |||||||    
T  43687884 gtaaaattgttatgacatttgactactttattccattcattaatccgtgtgcaattgactaaaacgacacttattttgaaacgga 43687800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 43736820 - 43736780
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  43736820 ttggctaaagcgacactcattttgaaacggatggagtactt 43736780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 11019978 - 11019919
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaat 238  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||| ||||||| ||||||    
T  11019978 ttgttttaaaattaatgtcactttcatttttcaatgcaataataattttttcttttcaat 11019919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 36730003 - 36729969
Alignment:
Q  135 tattccttccgttttaaaatgagtgtcgttttagc 169  Q
    |||||||||||||||||||||||||||||||||||    
T  36730003 tattccttccgttttaaaatgagtgtcgttttagc 36729969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 423
Target Start/End: Complemental strand, 40048886 - 40048848
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  40048886 ttggctaaagtgacactcattttaaaacggatggagtac 40048848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 52654310 - 52654360
Alignment:
Q  187 aaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaa 237  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||| |||||    
T  52654310 aaataaatgtcactttcagttttcaatacaataataactttttcttttcaa 52654360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 412
Target Start/End: Complemental strand, 25722462 - 25722381
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaac 412  Q
    |||||||||||||||| |||||||||||||||| |||  ||||| || || || ||||||||| ||| ||| ||||| ||||    
T  25722462 gtaaaattgttatgacatttgactactttattccatttcttaatctgtgtgcaattggctaaatcgatacttattttgaaac 25722381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 40717717 - 40717665
Alignment:
Q  284 ttttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||| |||| ||||||||||||| | ||||||||||||||    
T  40717717 ttttttctttaatgaaaa-caaaccaatagttgattaagataatttggtaaaat 40717665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 51398001 - 51397964
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  51398001 ttggctaaaacgacactcattttaaaacggatggagta 51397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 25363857 - 25363782
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgt 262  Q
    ||||||||||||| ||| |||||| ||| ||||||||| ||||| | || ||||||||  |||||||||||||||||    
T  25363857 aaaatgaatgtcatttttagtttctaatacaataataattttttat-tttaattgtatcatttaattaatattacgt 25363782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 422
Target Start/End: Complemental strand, 42939955 - 42939923
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||||||||    
T  42939955 taaagcgacactcattttaaaacggatggagta 42939923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 423
Target Start/End: Original strand, 51381876 - 51381968
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
    |||||| || |||||  |||||||| ||||||  |||| ||||| || || || ||| ||||||||||||||||||| ||||| |||||||||    
T  51381876 gtaaaactgctatgatatttgactattttatttcattccttaatctgtgtgcaattgactaaagcgacactcattttgaaacgaatggagtac 51381968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 425
Target Start/End: Original strand, 52222901 - 52222941
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagtactt 425  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  52222901 ttggctaaagcgacactcattttaaaacgaatggaatactt 52222941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 424
Target Start/End: Original strand, 2662638 - 2662677
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  2662638 ttggctaaagcgacactcattttaaaacggagcgagtact 2662677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 424
Target Start/End: Original strand, 25722622 - 25722661
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  25722622 ttggctaaagcgacactcattttgaaacggagggagtact 25722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 32303906 - 32303815
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| |||||||||||||||  |||| ||||| || || |  || | |||| ||||||||||||| || |||||||||||    
T  32303906 gtaaaattgctatgacatttgactactttatttcattccttaatctgtgtacgattagttaaaacgacactcattttgaagcggatggagta 32303815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 3985937 - 3986006
Alignment:
Q  268 tacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||| ||| ||||||| |||| ||||| || |||||||| |||||||| || ||| ||||||||||||||    
T  3985937 tactcccatagtattacttttactttagtggaaaacaaaccaatagttaataaggataatttggtaaaat 3986006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 4758978 - 4758945
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||||||||| ||||    
T  4758978 ctaaagcgacactcattttaaaacggatgaagta 4758945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 19115379 - 19115342
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  19115379 ttggctaaagcgacgctcattttaaaacggagggagta 19115342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 26965660 - 26965697
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  26965660 ttggctaaagtgacactcattttaaaacgaatggagta 26965697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 30186361 - 30186328
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| ||||||||||||||||||||||||||||    
T  30186361 ctaaaacgacactcattttaaaacggatggagta 30186328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 31290923 - 31290886
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  31290923 ttggctaaaacgacactcattttaaaacggagggagta 31290886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 38016367 - 38016330
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  38016367 ttggctaaaacgacactcattttgaaacggatggagta 38016330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 38277936 - 38277993
Alignment:
Q  365 attctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||| |||||||| || || ||||||||| ||||||||||||||||| ||| ||||||    
T  38277936 attccttaatttgagtgcaattggctaaaacgacactcattttaaaatggagggagta 38277993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 42791480 - 42791537
Alignment:
Q  365 attctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||| ||||| ||||| || |||||||||  |||||||||||| ||||||||||||||    
T  42791480 attccttaatatgcgtgcaattggctaaaatgacactcattttgaaacggatggagta 42791537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 42886741 - 42886704
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  42886741 ttggctaaagcgacactcattttgaaacggagggagta 42886704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 43169322 - 43169289
Alignment:
Q  389 ctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||||||||||||||||| ||||||    
T  43169322 ctaaagcgacactcattttaaaacggagggagta 43169289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 2567986 - 2567922
Alignment:
Q  360 attcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    ||||||||| ||||| |  || || ||||||||| ||||| ||||||||||||||||||| ||||    
T  2567986 attcaattccttaatctatgtgcaattggctaaaacgacattcattttaaaacggatggaatact 2567922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 170
Target Start/End: Complemental strand, 36461043 - 36461011
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttagct 170  Q
    ||||||||||||||||||||||||| |||||||    
T  36461043 tccttccgttttaaaatgagtgtcgctttagct 36461011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 388 - 424
Target Start/End: Original strand, 37225759 - 37225795
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  37225759 gctaaaacgacactcattttaaaacggagggagtact 37225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 388 - 424
Target Start/End: Complemental strand, 38363774 - 38363738
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||| |||||||||||||||||| |||||||||||    
T  38363774 gctaaaacgacactcattttaaaacagatggagtact 38363738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 479 - 543
Target Start/End: Original strand, 52838403 - 52838467
Alignment:
Q  479 tttaaatccgcgattttggtcccttgttttcttaaattttttaaattgaaaacatcatttaaatt 543  Q
    ||||||| | |||||||||||||||  ||| || ||||||||||||||||  |||||||| ||||    
T  52838403 tttaaattcacgattttggtcccttaattttttcaattttttaaattgaatccatcatttcaatt 52838467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 53560816 - 53560900
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgga 415  Q
    |||||||| ||||||| ||| |||||||||||  |||| ||||| ||  |  | ||||||||| ||||||| |||||||||||||    
T  53560816 gtaaaattattatgacatttaactactttattttattccttaatatgtatgtaattggctaaaacgacacttattttaaaacgga 53560900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 141; Significance: 1e-73; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 179 - 407
Target Start/End: Original strand, 62631 - 62859
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||||  ||| ||||||||||| |||| ||||||||||| |    
T  62631 ttgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctttttaattgtacccttcaattaatattatgttacactacttccaagg 62730  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    ||||| || ||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||||| |||| ||||| ||     
T  62731 tattacttcttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaattgttatgacatttgactactttattccattccttaatatgt 62830  T
Q  379 gtccagttggctaaagcgacactcatttt 407  Q
    || || |||||||||||||||||||||||    
T  62831 gtgcaattggctaaagcgacactcatttt 62859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 1e-70; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 183 - 413
Target Start/End: Original strand, 19674982 - 19675210
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||   || |||||||| || |||  |||||||| ||||| ||    
T  19674982 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccattcaattaatactatgttgcactacttctaaagtttt 19675081  T
Q  283 attttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtcc 382  Q
      |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||||| || || |    
T  19675082 --tttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgctatgacatttgactactttattcaattccttaatatgtgttc 19675179  T
Q  383 agttggctaaagcgacactcattttaaaacg 413  Q
    | |||| ||||||||||||||||||||||||    
T  19675180 aattggttaaagcgacactcattttaaaacg 19675210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 179 - 420
Target Start/End: Complemental strand, 23259480 - 23259239
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| || ||||||||||  ||| ||||||||||| |||| |||||||||||||    
T  23259480 ttgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataacttttacttttcaattgtacccttaaattaatattatgttacactacttccaaag 23259381  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgc 378  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||  |||  ||||| ||     
T  23259380 tattattttttctttagtgaaaagcaaatcaatagttgattaggataatttggtaaaattgttacgacatttgactactttatttcatttcttaatctgt 23259281  T
Q  379 gtccagttggctaaagcgacactcattttaaaacggatggag 420  Q
    || || || |||||||||| | |||||| |||||||| ||||    
T  23259280 gtgcaattagctaaagcgaaattcatttcaaaacggagggag 23259239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 145 - 423
Target Start/End: Original strand, 233998 - 234267
Alignment:
Q  145 gttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtatt 244  Q
    |||| |||||||||||||||||||||        |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||      
T  233998 gtttcaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacc 234097  T
Q  245 ctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatg 344  Q
    ||| |||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||      
T  234098 cttcaattaatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgcta-- 234195  T
Q  345 acttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtac 423  Q
           |||||||||||| ||||||||||  | || || |||| |||| ||||||||||||| ||||| | |||||||    
T  234196 -------actactttattccattctttaatccgtgtgcaattggttaaaacgacactcattttgaaacgaagggagtac 234267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 142 - 422
Target Start/End: Complemental strand, 24163905 - 24163625
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    |||||||||||||||||||| |||||||         |||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  24163905 tccgttttaaaatgagtgtcattttagc-caaaaaaattgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgt 24163807  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |   || |||||||| || |||| |||||||||||||||||||| ||||||||||||||||||||  ||||||||||| || ||||||| |||||||| |    
T  24163806 acatttcaattaatactatgttacactacttccaaagtattattatttctttaatgaaaaacaaactaatagttgatttggataatttgataaaattgct 24163707  T
Q  342 atgacttttgactacttta-ttcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||| |||||||| |||| |||| ||||| | | || || || ||||||||| ||||||||| ||||||||||||||||||    
T  24163706 atgacatttgactattttatttcatttcttaattatgtgtgcaattggctaaaacgacactcactttaaaacggatggagta 24163625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 183 - 422
Target Start/End: Complemental strand, 29713557 - 29713318
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||  ||| |||||||| || |||| ||||||| |||||||||    
T  29713557 ttcaaaatgaatgtcattttccgtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagtatt 29713458  T
Q  283 attttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtcc 382  Q
    |||||||||||||| |||||||||  |||||||||||||| |||||  ||||||||   || || ||||||||||| |||| |||| |||||  | || |    
T  29713457 attttttctttaataaaaaacaaactaatagttgattaggataattatgtaaaattaccataacatttgactacttgattccattccttaatacgtgtgc 29713358  T
Q  383 agttggctaaagcgacactcattttaaaacggatggagta 422  Q
    | ||| ||||||||||||||||||||||||||| ||||||    
T  29713357 aattgactaaagcgacactcattttaaaacggaaggagta 29713318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 215 - 424
Target Start/End: Original strand, 1134959 - 1135168
Alignment:
Q  215 caataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagt 314  Q
    ||||||||||||||||| ||||||||||  ||| |||||||| ||  ||| |||||||||||| ||||||||||||||||| ||||||||||  ||||||    
T  1134959 caataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaatattattttttctttaaagaaaaacaaacaaatagt 1135058  T
Q  315 tgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacgg 414  Q
    |||||||| |||||||||||||||| |||||| |||||||||||||||| |||| ||||| || || || ||||||||||| ||||| ||||| ||||||    
T  1135059 tgattaggataatttggtaaaattgatatgacatttgactactttattccattccttaatatgtgtgcaattggctaaagcaacacttattttgaaacgg 1135158  T
Q  415 atggagtact 424  Q
    |  |||||||    
T  1135159 agagagtact 1135168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 186 - 422
Target Start/End: Complemental strand, 24556076 - 24555838
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||| ||||||| ||||||||| ||||| |||||||| ||||||| |||||||||| |||| |||||||| || |||| | || || ||||||||| ||    
T  24556076 aaaataaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtactcttcaattaatactatgttacattattttcaaagtattttt 24555977  T
Q  286 ttttcttt-aatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccag 384  Q
    |||| ||| ||||||||||||||||||||||||||| | |||||||||||||||| || ||| |||||||||||||||| |||  ||||| ||  | ||     
T  24555976 tttttttttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattgctacgacatttgactactttattctatttcttaatctgtatgcaa 24555877  T
Q  385 ttggctaaagcgacactca-ttttaaaacggatggagta 422  Q
    || | |||||||||||||| |||||||||||||||||||    
T  24555876 tttgttaaagcgacactcatttttaaaacggatggagta 24555838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 179 - 339
Target Start/End: Complemental strand, 31443601 - 31443440
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctctt-caattgtattctttaattaatattacgttaaactacttccaaa 277  Q
    |||||| ||||||||||| | |||||||||||||||||||||||||||||| | || ||||||||   || |||||||| || |||| |  |||||||||    
T  31443601 ttgtttaaaaatgaatgttattttcagtttccaatgcaataataactttttttttttcaattgtacctttcaattaatactatgttacataacttccaaa 31443502  T
Q  278 gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattg 339  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  31443501 gtattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaattg 31443440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 9940646 - 9940803
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||||  | ||||||||||  ||| |||||||||||    | ||||||||||||     
T  9940646 ttgttttaaaatgattgtcactttcagttttcaatgcaataataacttttctttttcaattgtacccttcaattaatattatac-acactacttccaaaa 9940744  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  9940745 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 9940803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 238 - 368
Target Start/End: Complemental strand, 10540572 - 10540442
Alignment:
Q  238 ttgtattctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||| ||| |||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||  ||||||    
T  10540572 ttgtatccttcaattaatactatattacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttaataaaat 10540473  T
Q  338 tgttatgacttttgactactttattcaattc 368  Q
    ||||||||  |||||||||||||||| ||||    
T  10540472 tgttatgatatttgactactttattccattc 10540442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 179 - 338
Target Start/End: Complemental strand, 17552400 - 17552243
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||| |||||||||||| |||||||||||||||||||||||  ||||| | |||||||||| | ||||||||||| ||  | | ||||||||||||     
T  17552400 ttgtttcgaaatgaatgtcattttcagtttccaatgcaataata--ttttttttttcaattgtaatttttaattaatactatat-acactacttccaaaa 17552304  T
Q  279 tattatttttt-ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaatt 338  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||    
T  17552303 tattatttttttctttaatgaaaaacaaaccaattgttgattaggataatttggtaaaatt 17552243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 180 - 337
Target Start/End: Complemental strand, 13504002 - 13503841
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctc--ttcaattgtattctttaattaatattacgt-taaactacttccaa 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||  ||| |||||||| ||  | || ||||||| |||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttttttatttcaattgtacccttcaattaatactatatatacactactttcaa 13503903  T
Q  277 agtattatttttt--ctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||||  ||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  13503902 agtattattttttttctttaatgaaaaacaaa-caatagtttattaggataatttggtaaaat 13503841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 183 - 337
Target Start/End: Complemental strand, 12459469 - 12459316
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    ||||||||||||||||||||| ||||| ||| |||||||| |||||||| ||||||| ||  ||| |||||||| ||  | | | |||||||||||||||    
T  12459469 ttcaaaatgaatgtcactttcggtttctaatacaataatatctttttcttttcaattatacccttcaattaatactatat-acattacttccaaagtatt 12459371  T
Q  283 attttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
     ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||    
T  12459370 gttttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaat 12459316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 261 - 422
Target Start/End: Complemental strand, 10520463 - 10520302
Alignment:
Q  261 gttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactacttta 360  Q
    |||| |||||||  ||||||||||||||| |||||||| ||||||  ||||| ||||||| | |||||||||||||||| |||||| |||||||||||||    
T  10520463 gttacactacttttaaagtattattttttatttaatgagaaacaatccaatatttgattaagataatttggtaaaattgctatgacatttgactacttta 10520364  T
Q  361 ttcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||  |||| ||||| || || || |||| ||||||||||||||||||| |||||| ||||||    
T  10520363 tttcattccttaatatgtgtacaattggttaaagcgacactcattttacaacggagggagta 10520302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 179 - 335
Target Start/End: Complemental strand, 18737245 - 18737087
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||  |||||||||||||||   || |||||||  ||||    
T  18737245 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttcttttcaattataccctttaattaatatta-tatacactacttttaaag 18737147  T
Q  279 ---tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaa 335  Q
       |||||||||||||||||||||||| ||| |||||||| |||||| ||||||| ||||    
T  18737146 tactattattttttctttaatgaaaaataaaacaatagttaattaggataatttgataaa 18737087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 3988896 - 3988741
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||| |||  ||||||||||||||||||||||||||| ||||||| ||||||| ||  ||| |||||||| ||  | | |||| ||| ||||    
T  3988896 ttgtttcaaaataaat--cactttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactatat-atactatttcaaaag 3988800  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||    
T  3988799 tattattttttctttaatgaaaaacaaacaaatagttgattatgataatttggtaaaat 3988741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 144 - 315
Target Start/End: Original strand, 32193665 - 32193835
Alignment:
Q  144 cgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtat 243  Q
    ||||||||||||||||||||||||||         |||||| ||||| ||||||||||| |||||| ||||||||||||| ||||||| ||||||||||     
T  32193665 cgttttaaaatgagtgtcgttttagccaaaataatttgttttaaaataaatgtcacttttagtttctaatgcaataataattttttcttttcaattgtac 32193764  T
Q  244 tctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagtt 315  Q
     ||| |||||||| ||   || ||||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  32193765 ccttcaattaatacta-tatacactacttccaaagtattatcttttctttaatgtaaaacaaaccaatagtt 32193835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 140 - 337
Target Start/End: Original strand, 577022 - 577217
Alignment:
Q  140 cttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    ||||||||||||||||||| ||||||||||         |||||| ||||| | | ||||||||||||| |||||||||||||||||| ||  |||||||    
T  577022 cttccgttttaaaatgagtatcgttttagc--aaaaaaattgttttaaaataactatcactttcagttttcaatgcaataataactttatcatttcaatt 577119  T
Q  240 gtattctttaattaatattacgttaaactacttccaaagtattatttt-ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
     ||  ||| |||||||||||  | | |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  577120 atacccttcaattaatattatat-acactacttccaaattattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaat 577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 183 - 337
Target Start/End: Complemental strand, 12323035 - 12322881
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||   |||||||| |  ||| |||||||| ||  | | |||||||||||||||||    
T  12323035 ttcaaaatgaatgtcactttcagtttccaatgcaataata--ttttttatttcaattgcacccttcaattaatactatat-acactacttccaaagtatt 12322939  T
Q  283 attttttctttaatga---aaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
     | |||||||||||||   |||| |||||||||||| |||||| ||||||||||||||    
T  12322938 gtgttttctttaatgaaaaaaaaaaaatcaatagttaattaggataatttggtaaaat 12322881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 29399907 - 29400007
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  29399907 tccgtttcaaaatgagtgtcgttttagcaacaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgt 29400006  T
Q  242 a 242  Q
    |    
T  29400007 a 29400007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 12063665 - 12063558
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||  ||| |||| ||| || |||| |||||||| ||||    
T  12063665 ttgtttccaaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtacccttcaattgatactatgttacactacttctaaag 12063566  T
Q  279 tattattt 286  Q
    ||||||||    
T  12063565 tattattt 12063558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 4850650 - 4850587
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  4850650 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgta 4850587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 179 - 302
Target Start/End: Original strand, 19600419 - 19600541
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||||||||||  ||||||| ||||| | |||||||||||| |||||||||||| ||||||  |||||||||| ||| | ||  |||||||||||     
T  19600419 ttgtttcaaaatgaagatcactttaagttttctatgcaataataattttttctcttcatttgtatcttttaattaatgtta-gatacgctacttccaaaa 19600517  T
Q  279 tattattttttctttaatgaaaaa 302  Q
    |||||||||||||||||| |||||    
T  19600518 tattattttttctttaataaaaaa 19600541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 20226289 - 20226218
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  20226289 actacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaat 20226218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 22120273 - 22120202
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  22120273 actacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaat 22120202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 32429247 - 32429346
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||||||||||||||||||||||||         ||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||    
T  32429247 tccgttttaaaatgagtgtcgttttagc--caaaaaattgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttcttttcaattgt 32429344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 10540700 - 10540601
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    |||||||||||||||||||||||||||||        |||||||||||| ||||||||||||| ||||||||||||||||||| |||| | |||||||||    
T  10540700 tccgttttaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaataaatgtcactttcaatttccaatgcaataataaccttttgt-ttcaattgt 10540602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 34513739 - 34513655
Alignment:
Q  198 actttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||| ||||  ||||||||||| ||||    
T  34513739 actttcagtttccaatgcaataataactttttcttttcaattgtatccttcaattaatgttatgttaccctacttccaaaatatt 34513655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 1502821 - 1502750
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||||| |||| | ||||||||||||||    
T  1502821 actacttccaaaatattattttttatttaatgaaaaacaaaccaatagttaattaagataatttggtaaaat 1502750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 267 - 337
Target Start/End: Complemental strand, 21271469 - 21271400
Alignment:
Q  267 ctacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||||||| || |||||||||||    
T  21271469 ctacttccaaattattattttt-ctttaatgaagaacaaatcaatagttgattaggatactttggtaaaat 21271400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 32619884 - 32619830
Alignment:
Q  275 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaattt 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  32619884 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaagataattt 32619830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 16128075 - 16128006
Alignment:
Q  266 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaa 335  Q
    |||||||| |||||||||||||||||||||||||||||||| | ||||||||||||| ||| ||| ||||    
T  16128075 actacttcaaaagtattattttttctttaatgaaaaacaaaccgatagttgattaggataaattgataaa 16128006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 302
Target Start/End: Complemental strand, 31233780 - 31233655
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaa-- 276  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  |||||| ||||||||||  ||| |||| ||| ||    |||||||||||||      
T  31233780 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 31233682  T
Q  277 -agtattattttttctttaatgaaaaa 302  Q
     | ||||||||||||||||||||||||    
T  31233681 tattattattttttctttaatgaaaaa 31233655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 8957865 - 8957920
Alignment:
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaa 334  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  8957865 tattattttttctttaataaaaaacaaaccaatagttgattaggataatttggtaa 8957920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 8961492 - 8961437
Alignment:
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaa 334  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  8961492 tattattttttctttaataaaaaacaaaccaatagttgattaggataatttggtaa 8961437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 274 - 337
Target Start/End: Original strand, 17828375 - 17828438
Alignment:
Q  274 caaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||| | ||||||||||||||    
T  17828375 caaagtattactttttctttaatgaaaaacaaaccaatggttgattaagataatttggtaaaat 17828438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 10520827 - 10520716
Alignment:
Q  145 gttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtatt 244  Q
    ||||||||||||||||| ||||||||        |||||| ||||| ||||||||||||| ||| |||| ||||||||| ||||||| ||||||||||      
T  10520827 gttttaaaatgagtgtcattttagctaaaaaaa-ttgttttaaaataaatgtcactttcaattttcaatacaataataattttttcttttcaattgtacc 10520729  T
Q  245 ctttaattaatat 257  Q
    ||| |||||||||    
T  10520728 cttcaattaatat 10520716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 13011400 - 13011345
Alignment:
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||||||||||||||||||||| | ||||||||||| | ||||||||||||||    
T  13011400 tattttttctttaatgaaaaacaaaccgatagttgattaagataatttggtaaaat 13011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 8030643 - 8030703
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    ||||||||||||||| ||||||||||| ||||| |||||||| ||||||| ||||| ||||    
T  8030643 tttcaaaatgaatgttactttcagttttcaatgtaataataattttttcttttcaactgta 8030703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 21272257 - 21272205
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttct 231  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  21272257 ttgttttaaaatgaatatcactttcagtttccaatgtaataataacattttct 21272205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 274 - 337
Target Start/End: Original strand, 3847744 - 3847807
Alignment:
Q  274 caaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||| | |||||  |||||||    
T  3847744 caaaggattattttttctttaattaaaaataaatcaatagttgattaagataattctgtaaaat 3847807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 12588531 - 12588574
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataacttttt 229  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  12588531 aaaatgaatgttactttcagtttgcaatgcaataataacttttt 12588574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 210 - 332
Target Start/End: Complemental strand, 17267731 - 17267609
Alignment:
Q  210 caatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatta-ttttttctttaatgaaaaacaaatc 308  Q
    |||||||||||||| ||||||| ||||| ||||  |||||||||||||||   || |||| ||  ||||||||| |||||||||| || |||||||||      
T  17267731 caatgcaataataattttttcttttcaactgtaccctttaattaatatta-tatacactatttttaaagtattatttttttctttgataaaaaacaaact 17267633  T
Q  309 aatagttgattaggctaatttggt 332  Q
    |||| ||||||||  |||||||||    
T  17267632 aatatttgattagaataatttggt 17267609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 17345137 - 17345050
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| |||||| || ||||||||||||| |||| ||| | |||    | ||||||||||||||||||||||||||| ||| ||||||    
T  17345137 gtaaaattgctatgacattcgactactttattccattccttagtgtgc----aattggctaaagcgacactcattttaaaatggagggagta 17345050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 32429277 - 32429240
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  32429277 ttggctaaaacgacactcattttaaaacggatggagta 32429240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 19689357 - 19689405
Alignment:
Q  208 tccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    |||||||||||||||||||||||| ||||| |||| |||| ||||||||    
T  19689357 tccaatgcaataataactttttcttttcaactgtactcttcaattaata 19689405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 422
Target Start/End: Original strand, 26669262 - 26669294
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||||||||    
T  26669262 taaagcgacactcattttaaaacggatggagta 26669294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 1502893 - 1502834
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaatt 239  Q
    ||||| ||||| ||||||| |||||||||||||||||||| ||| | ||||| |||||||    
T  1502893 tgttttaaaattaatgtcattttcagtttccaatgcaatagtaattatttcttttcaatt 1502834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 17246721 - 17246678
Alignment:
Q  249 aattaatattacgttaaactacttccaaagtattattttttctt 292  Q
    |||||||| || |||| |||||||||||||||||||||||||||    
T  17246721 aattaatactatgttacactacttccaaagtattattttttctt 17246678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 32193927 - 32193965
Alignment:
Q  299 aaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  32193927 aaaacaaaccaatagttgattaggataatttggtaaaat 32193965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 34439323 - 34439353
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttag 168  Q
    |||||||||||||||||||||||||||||||    
T  34439323 tccttccgttttaaaatgagtgtcgttttag 34439353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 34519290 - 34519324
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||| ||||||||||||||||||||||||||||    
T  34519290 gctaaaacgacactcattttaaaacggatggagta 34519324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 17246761 - 17246728
Alignment:
Q  180 tgtttcaaaatgaatgtcactttcagtttccaat 213  Q
    ||||||||||||||||||||||| ||||||||||    
T  17246761 tgtttcaaaatgaatgtcactttaagtttccaat 17246728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 26189499 - 26189462
Alignment:
Q  385 ttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  26189499 ttggttaaagcgacactcattttgaaacggatggagta 26189462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 417
Target Start/End: Original strand, 28554769 - 28554798
Alignment:
Q  388 gctaaagcgacactcattttaaaacggatg 417  Q
    ||||||||||||||||||||||||||||||    
T  28554769 gctaaagcgacactcattttaaaacggatg 28554798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 422
Target Start/End: Complemental strand, 9940634 - 9940602
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||| ||||||||||||||    
T  9940634 taaagcgacactcattttgaaacggatggagta 9940602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 3656 - 3465
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtat 281  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||  ||| |||||||| || |||| |||||||| |||||||    
T  3656 tttcaaaatgaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttctaaagtat 3557  T
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaa 373  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| ||| || |||||||| |||||||||||| ||||    
T  3556 tattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaattgctataacatttgactattttattcaattcattaa 3465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 121; Significance: 1e-61; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 186 - 422
Target Start/End: Complemental strand, 21229 - 20993
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||| |||||||| || |||| ||||||||||||  ||||||    
T  21229 aaaatgactgtcactttcagtttcaaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaatgattatt 21130  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagt 385  Q
    || | |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||  |||| ||||| |  || || |    
T  21129 ttctttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgacgtttgactattttattttattccttaatctatgtgcaat 21030  T
Q  386 tggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  21029 tggctaaagcgacactaattttaaaacggagggagta 20993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 390 - 422
Target Start/End: Original strand, 21248 - 21280
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||| ||||||||||||||||||||||||||||    
T  21248 taaaacgacactcattttaaaacggatggagta 21280  T

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Target: scaffold0565 (Bit Score: 113; Significance: 7e-57; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 142 - 346
Target Start/End: Complemental strand, 9833 - 9630
Alignment:
Q  142 tccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgt 241  Q
    ||||||| ||||||| ||||||||||||         |||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  9833 tccgtttcaaaatgactgtcgttttagccaaaaaaaattgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgt 9734  T
Q  242 attctttaattaatattacgttaaactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaattgtt 341  Q
    |  ||| |||||||| || |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  9733 acccttcaattaatactatgttacactacttccaaa-tattattttttctttaatgaaaaacaactcaatagttgattatgataatttggtaaaattgtt 9635  T
Q  342 atgac 346  Q
    |||||    
T  9634 atgac 9630  T

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Target: scaffold0565; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 10110 - 9952
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt-ctcttcaattgtattctttaattaatattacgttaaactacttccaaa 277  Q
    |||||| ||||||||||||||||||| ||| |||| | ||||||| ||||| || ||||||||||  ||| ||||| || ||  |  || |||||| |||    
T  10110 ttgttttaaaatgaatgtcactttcaattttcaatactataataatttttttcttttcaattgtacccttcaattagtactatatacaa-tacttcaaaa 10012  T
Q  278 gtattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
     ||||||||||||||||| ||||||||||  |||||||||||| | ||||||||||||||    
T  10011 atattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 9952  T

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Target: scaffold0502 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 186 - 337
Target Start/End: Complemental strand, 719 - 569
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattatt 285  Q
    |||||||||||||||| || |||||||||||||||||||||||||| || |||||||  ||| |||||||||||  | | ||||||||||||||||||||    
T  719 aaaatgaatgtcacttacaatttccaatgcaataataactttttctttttaattgtacccttcaattaatattatat-acactacttccaaagtattatt 621  T
Q  286 ttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||  |||||||||||| ||||||||||||||||| | ||||||||||||||    
T  620 tttgttttaatgaaaaagaaatcaatagttgattatgataatttggtaaaat 569  T

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Target: scaffold0983 (Bit Score: 83; Significance: 6e-39; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 841 - 684
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    |||||||| |||||||||||||||||||||||| || |||||||| ||||||| ||||||||||  |||||||||||||||   || |||| ||||||||    
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttcttttcaattgtaccctttaattaatatta-tatacactaattccaaag 743  T
Q  279 tattattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
      || ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||    
T  742 acttgttttttctttaatgaaaaacatatcaatagttgattaagataatttggtaaaat 684  T

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Target: scaffold0182 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 183 - 337
Target Start/End: Complemental strand, 18405 - 18252
Alignment:
Q  183 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtatt 282  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  ||| |||||| ||||   || |||| || |||||||||    
T  18405 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaacatta-tatacactattttcaaagtatt 18307  T
Q  283 attttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||| |||||||||||||||||| |||||||||||||   ||||||| ||||||    
T  18306 attttatctttaatgaaaaacaaaccaatagttgattaaaataatttgataaaat 18252  T

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Target: scaffold0078 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 1568 - 1446
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaag 278  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||  ||| | ||||||||| |||| ||||||||||||     
T  1568 ttgtttcaaaatgaatgtcactttcagtttctaatgcaatgataactttttcttttcaattgtacccttcatttaatattatgttacactacttccaaaa 1469  T
Q  279 tattatt-ttttctttaatgaaa 300  Q
    ||||||| |||||||||||||||    
T  1468 tattatttttttctttaatgaaa 1446  T

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Target: scaffold0078; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 1448 - 1371
Alignment:
Q  334 aaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaa 411  Q
    |||||| |||||| |||||||||||||||  |||| ||||| || || || ||| |||||| ||||||||||||||||    
T  1448 aaattgctatgacatttgactactttatttcattccttaatctgtgtgcaattgactaaagtgacactcattttaaaa 1371  T

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Target: scaffold0300 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 182 - 337
Target Start/End: Original strand, 4566 - 4720
Alignment:
Q  182 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtat 281  Q
    ||||||||||||||||||||| | |||  ||||||||||||| ||||||| ||||||||||   || ||| |||||||  | | |||||||||||| |||    
T  4566 tttcaaaatgaatgtcacttttaatttttaatgcaataataattttttcttttcaattgtacctttcaatcaatattatat-acactacttccaaaatat 4664  T
Q  282 tattttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||| ||| ||||||| ||||||||||||||||||||||||| || |||||||||||    
T  4665 tatatttactttaataaaaaacaaatcaatagttgattaggatagtttggtaaaat 4720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 186 - 337
Target Start/End: Original strand, 4145 - 4296
Alignment:
Q  186 aaaatgaatgtcacttt-cagtttccaatgcaataataactttttctcttcaattgtattctttaattaatattacgttaaactacttccaaagtattat 284  Q
    ||||||||||||| ||| || ||| |||||||||||||| ||||||| ||||||||||  ||| |||||||||||  | | |||||||| |||||||| |    
T  4145 aaaatgaatgtcatttttcaattttcaatgcaataataattttttcttttcaattgtacccttcaattaatattatat-acactacttctaaagtattgt 4243  T
Q  285 tttttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    |||| ||||||| |||||||||| |||||||||| ||| ||||||||||||||    
T  4244 ttttcctttaataaaaaacaaattaatagttgataaggataatttggtaaaat 4296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 3965 - 3902
Alignment:
Q  179 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgta 242  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  3965 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgta 3902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 3736 - 3766
Alignment:
Q  138 tccttccgttttaaaatgagtgtcgttttag 168  Q
    |||||||||||||||||||||||||||||||    
T  3736 tccttccgttttaaaatgagtgtcgttttag 3766  T

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Target: scaffold2107 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 186 - 256
Target Start/End: Complemental strand, 661 - 591
Alignment:
Q  186 aaaatgaatgtcactttcagtttccaatgcaataataactttttctcttcaattgtattctttaattaata 256  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||  ||| ||||||||    
T  661 aaaatgaatgtcactttcagtttccaatgcaataataattttttctttacaattgtacccttcaattaata 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 377
Target Start/End: Complemental strand, 418 - 341
Alignment:
Q  300 aaacaaatcaatagttgattaggctaatttggtaaaattgttatgacttttgactactttattcaattctttaatttg 377  Q
    ||||||||||||||||||||| | |||| |||||||| ||| ||||| |||||||||||||||  |||| ||||||||    
T  418 aaacaaatcaatagttgattaagataatgtggtaaaaatgtcatgacatttgactactttatttgattccttaatttg 341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 9628 - 9700
Alignment:
Q  266 actacttccaaagtattatttt-ttctttaatgaaaaacaaatcaatagttgattaggctaatttggtaaaat 337  Q
    ||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  9628 actactttcaaattattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaat 9700  T

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Target: scaffold0047 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 70456 - 70365
Alignment:
Q  331 gtaaaattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||| ||||| ||||||||||||||||||||  ||||| ||  | || |||| || ||||||||||||||||||||||| ||||||    
T  70456 gtaaaattgtcatgacatttgactactttattcaatttcttaatctgtatgcaattggttatagcgacactcattttaaaacggaaggagta 70365  T

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Target: scaffold0758 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 6326 - 6237
Alignment:
Q  335 aattgttatgacttttgactactttattcaattctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagtact 424  Q
    |||||||||||| |||||||||||||||  |||| |||||  | || || || ||||||| |||||||||||| ||||||| ||||||||    
T  6326 aattgttatgacatttgactactttatttcattccttaatccgtgtgcaattagctaaagtgacactcattttgaaacggaaggagtact 6237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 75492 - 75410
Alignment:
Q  140 cttccgttttaaaatgagtgtcgttttagctnnnnnnnnttgtttcaaaatgaatgtcactttcagtttccaatgcaataataa 223  Q
    ||||||||||||||| ||||||||||||||         ||||||||||||||||||||| |||||||| ||| ||||||||||    
T  75492 cttccgttttaaaataagtgtcgttttagc-aaaaagaattgtttcaaaatgaatgtcacattcagttttcaaagcaataataa 75410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 158273 - 158329
Alignment:
Q  365 attctttaatttgcgtccagttggctaaagcgacactcattttaaaacggatggagta 422  Q
    ||||||||||||| ||| | ||||||||| ||||||||||||||||||||||| ||||    
T  158273 attctttaatttgtgtcaa-ttggctaaaacgacactcattttaaaacggatgaagta 158329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 422
Target Start/End: Complemental strand, 1531 - 1499
Alignment:
Q  390 taaagcgacactcattttaaaacggatggagta 422  Q
    |||||||||||||||||||||||||||||||||    
T  1531 taaagcgacactcattttaaaacggatggagta 1499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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