View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1484-Insertion-20 (Length: 469)

Name: NF1484-Insertion-20
Description: NF1484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1484-Insertion-20
NF1484-Insertion-20
[»] chr4 (37 HSPs)
chr4 (7-468)||(48129674-48130136)
chr4 (322-468)||(30109980-30110133)
chr4 (286-419)||(6690276-6690419)
chr4 (318-419)||(3292937-3293043)
chr4 (318-419)||(43143625-43143731)
chr4 (318-419)||(42333817-42333923)
chr4 (318-418)||(30216784-30216889)
chr4 (318-419)||(20129330-20129436)
chr4 (321-419)||(50205118-50205221)
chr4 (322-419)||(17511275-17511377)
chr4 (318-419)||(25930728-25930834)
chr4 (318-419)||(48989348-48989454)
chr4 (318-419)||(10352925-10353031)
chr4 (318-419)||(26439320-26439426)
chr4 (318-419)||(34407325-34407431)
chr4 (318-419)||(43355924-43356030)
chr4 (318-419)||(44156671-44156777)
chr4 (320-393)||(29319777-29319850)
chr4 (322-416)||(35545977-35546076)
chr4 (318-419)||(13012208-13012314)
chr4 (318-419)||(47500793-47500899)
chr4 (318-383)||(27363381-27363446)
chr4 (322-419)||(26448077-26448178)
chr4 (320-394)||(30077702-30077776)
chr4 (319-419)||(28877291-28877396)
chr4 (322-395)||(29996053-29996126)
chr4 (323-391)||(6254569-6254637)
chr4 (322-394)||(40529039-40529111)
chr4 (6-63)||(23962988-23963046)
chr4 (318-419)||(36382387-36382492)
chr4 (322-388)||(45194200-45194266)
chr4 (353-419)||(6235575-6235646)
chr4 (6-63)||(50512628-50512686)
chr4 (333-419)||(1817752-1817843)
chr4 (430-464)||(12211244-12211278)
chr4 (434-466)||(4325538-4325570)
chr4 (420-464)||(10632662-10632706)
[»] chr8 (26 HSPs)
chr8 (318-468)||(3435289-3435446)
chr8 (286-419)||(23402091-23402234)
chr8 (318-419)||(34136866-34136972)
chr8 (318-419)||(4404028-4404134)
chr8 (318-419)||(16788066-16788172)
chr8 (321-468)||(40470484-40470637)
chr8 (320-419)||(9877242-9877346)
chr8 (318-419)||(3648835-3648941)
chr8 (321-419)||(29728427-29728530)
chr8 (290-388)||(36408538-36408641)
chr8 (286-387)||(2729274-2729380)
chr8 (318-419)||(15838306-15838411)
chr8 (318-395)||(39914535-39914611)
chr8 (6-63)||(43497348-43497406)
chr8 (430-466)||(9256512-9256548)
chr8 (431-466)||(13152410-13152445)
chr8 (431-466)||(28846729-28846764)
chr8 (330-419)||(42230971-42231063)
chr8 (432-466)||(10467876-10467910)
chr8 (432-466)||(24333842-24333876)
chr8 (420-465)||(14446945-14446990)
chr8 (431-464)||(32359546-32359579)
chr8 (431-464)||(32372082-32372115)
chr8 (125-169)||(13540614-13540658)
chr8 (125-169)||(13683815-13683859)
chr8 (432-464)||(24592355-24592387)
[»] chr1 (22 HSPs)
chr1 (311-468)||(41972265-41972429)
chr1 (327-468)||(33489716-33489864)
chr1 (281-419)||(35907530-35907678)
chr1 (318-417)||(42310984-42311088)
chr1 (317-419)||(3829003-3829110)
chr1 (318-419)||(17445333-17445439)
chr1 (318-394)||(32982127-32982203)
chr1 (318-419)||(321418-321524)
chr1 (321-395)||(7433468-7433542)
chr1 (318-419)||(26144275-26144381)
chr1 (318-383)||(35951427-35951492)
chr1 (125-165)||(43683955-43683995)
chr1 (6-63)||(24234678-24234736)
chr1 (408-464)||(11843917-11843974)
chr1 (431-464)||(48606630-48606663)
chr1 (430-466)||(32379872-32379908)
chr1 (6-63)||(16087088-16087146)
chr1 (318-395)||(23313258-23313336)
chr1 (318-367)||(48901203-48901252)
chr1 (430-466)||(30054944-30054980)
chr1 (432-464)||(30559023-30559055)
chr1 (431-463)||(40864738-40864770)
[»] chr5 (29 HSPs)
chr5 (320-466)||(28801309-28801462)
chr5 (286-419)||(17332592-17332735)
chr5 (281-419)||(31501757-31501905)
chr5 (318-419)||(33430341-33430447)
chr5 (320-419)||(37254663-37254767)
chr5 (317-419)||(13817996-13818103)
chr5 (318-419)||(10033947-10034053)
chr5 (322-419)||(12278901-12279003)
chr5 (281-419)||(31680345-31680493)
chr5 (317-419)||(39657547-39657654)
chr5 (318-419)||(16155017-16155123)
chr5 (322-419)||(36293662-36293764)
chr5 (318-395)||(39434716-39434793)
chr5 (318-395)||(43068897-43068974)
chr5 (328-419)||(16333917-16334013)
chr5 (321-396)||(19985962-19986037)
chr5 (318-419)||(1776417-1776523)
chr5 (318-419)||(26283359-26283465)
chr5 (317-418)||(3155673-3155779)
chr5 (318-395)||(36291391-36291468)
chr5 (420-466)||(203963-204009)
chr5 (398-465)||(192048-192116)
chr5 (431-466)||(3055606-3055641)
chr5 (318-383)||(202659-202724)
chr5 (431-464)||(22542010-22542043)
chr5 (431-464)||(22712917-22712950)
chr5 (431-464)||(27168821-27168854)
chr5 (124-165)||(36301854-36301895)
chr5 (424-464)||(38269409-38269449)
[»] chr3 (22 HSPs)
chr3 (320-468)||(5135291-5135446)
chr3 (320-419)||(11018253-11018357)
chr3 (286-419)||(45182964-45183107)
chr3 (286-393)||(33040936-33041048)
chr3 (318-419)||(27935198-27935304)
chr3 (286-419)||(6930935-6931078)
chr3 (322-419)||(6269467-6269569)
chr3 (318-395)||(22968514-22968591)
chr3 (318-419)||(39771810-39771916)
chr3 (282-392)||(6503642-6503757)
chr3 (318-418)||(40081782-40081886)
chr3 (318-419)||(19390166-19390272)
chr3 (326-419)||(19565542-19565640)
chr3 (322-419)||(34084163-34084265)
chr3 (286-419)||(45335858-45336000)
chr3 (398-463)||(38282497-38282563)
chr3 (318-419)||(35514286-35514388)
chr3 (6-63)||(2397927-2397985)
chr3 (429-466)||(51262101-51262138)
chr3 (124-183)||(13639450-13639509)
chr3 (432-464)||(9743393-9743425)
chr3 (432-464)||(43137251-43137283)
[»] chr2 (25 HSPs)
chr2 (322-467)||(4555202-4555354)
chr2 (318-419)||(771019-771125)
chr2 (286-419)||(45418566-45418709)
chr2 (318-419)||(41251675-41251781)
chr2 (318-419)||(42440006-42440112)
chr2 (318-417)||(12756880-12756984)
chr2 (318-419)||(44084644-44084750)
chr2 (320-419)||(31581663-31581767)
chr2 (286-418)||(8147334-8147477)
chr2 (318-419)||(2958142-2958247)
chr2 (320-394)||(8059404-8059478)
chr2 (318-419)||(18981636-18981742)
chr2 (318-419)||(35962735-35962841)
chr2 (321-419)||(17445082-17445183)
chr2 (318-468)||(7072540-7072699)
chr2 (318-419)||(6403845-6403951)
chr2 (318-395)||(26237977-26238053)
chr2 (318-418)||(32127183-32127288)
chr2 (318-394)||(16405620-16405696)
chr2 (318-395)||(26162769-26162846)
chr2 (396-464)||(45121320-45121389)
chr2 (317-377)||(34905968-34906028)
chr2 (423-466)||(12539689-12539732)
chr2 (323-419)||(2285887-2285988)
chr2 (431-466)||(13309713-13309748)
[»] chr7 (31 HSPs)
chr7 (318-419)||(34389097-34389203)
chr7 (318-419)||(35090188-35090294)
chr7 (360-468)||(10868465-10868580)
chr7 (317-417)||(33685583-33685688)
chr7 (286-419)||(37002185-37002328)
chr7 (318-419)||(3114137-3114243)
chr7 (321-419)||(38638277-38638380)
chr7 (318-419)||(5555507-5555613)
chr7 (318-419)||(8867772-8867878)
chr7 (318-419)||(14777148-14777254)
chr7 (319-419)||(26624766-26624872)
chr7 (318-419)||(36630836-36630942)
chr7 (317-419)||(43184509-43184616)
chr7 (322-419)||(36658205-36658307)
chr7 (318-419)||(40920044-40920150)
chr7 (318-419)||(8394145-8394251)
chr7 (7-63)||(32064531-32064587)
chr7 (318-419)||(7002745-7002851)
chr7 (318-419)||(7048616-7048722)
chr7 (6-63)||(48765973-48766031)
chr7 (125-168)||(557466-557509)
chr7 (420-466)||(14088861-14088907)
chr7 (420-466)||(14398879-14398925)
chr7 (318-388)||(26502830-26502899)
chr7 (318-388)||(26589815-26589884)
chr7 (430-466)||(26782330-26782366)
chr7 (127-183)||(32498803-32498859)
chr7 (422-466)||(38575305-38575349)
chr7 (431-466)||(9230525-9230560)
chr7 (438-468)||(33685692-33685722)
chr7 (422-466)||(27387322-27387366)
[»] scaffold0154 (1 HSPs)
scaffold0154 (318-419)||(31500-31606)
[»] scaffold0069 (1 HSPs)
scaffold0069 (318-395)||(17862-17939)
[»] chr6 (15 HSPs)
chr6 (321-419)||(28996753-28996856)
chr6 (320-395)||(34948828-34948903)
chr6 (318-419)||(18339126-18339232)
chr6 (317-419)||(13837840-13837947)
chr6 (318-419)||(398637-398743)
chr6 (318-419)||(29743303-29743409)
chr6 (318-395)||(33229406-33229483)
chr6 (318-383)||(24697899-24697964)
chr6 (322-394)||(31028435-31028507)
chr6 (6-49)||(4137377-4137421)
chr6 (431-466)||(11971083-11971118)
chr6 (420-466)||(3050976-3051022)
chr6 (125-178)||(9033152-9033205)
chr6 (326-375)||(24072576-24072625)
chr6 (326-383)||(24695515-24695572)
[»] scaffold0502 (1 HSPs)
scaffold0502 (318-419)||(5250-5356)
[»] scaffold2142 (1 HSPs)
scaffold2142 (318-419)||(542-648)
[»] scaffold0041 (1 HSPs)
scaffold0041 (318-419)||(52945-53051)
[»] scaffold0002 (2 HSPs)
scaffold0002 (318-419)||(480498-480604)
scaffold0002 (430-464)||(435366-435400)
[»] scaffold0045 (2 HSPs)
scaffold0045 (124-181)||(62493-62550)
scaffold0045 (124-181)||(69825-69882)
[»] scaffold0178 (1 HSPs)
scaffold0178 (430-466)||(17863-17899)


Alignment Details
Target: chr4 (Bit Score: 362; Significance: 0; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 7 - 468
Target Start/End: Original strand, 48129674 - 48130136
Alignment:
Q  7 aaattcatggttttattttcttatg-cattttaatcttcaaatttttggttttcatctttaaattaacgaggagtgttataacactctttctaacatttt 105  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | | |    
T  48129674 aaattcatgattttattttcttatggcattttaatctttaaatttttggtcttcatctttaaattaacgaggagtgttataacactctttctaagactct 48129773  T
Q  106 tgctaacaaattcacttgtttattggatgaaattcatgtgagtatcacactttaaaaatggatatcatataaaatggtaacacttacatatatgttttat 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||  ||||||     
T  48129774 tgctaacacattcacttgtttattggatgaaattcatgtgagtatcacactttaaaaatggatctcatgtaaaatggtgacacttacatat--gttttac 48129871  T
Q  206 ccaatagaagagtgagtcaagagagtg-ctcctaacatttctctaaaataatactaataatataaaataagatattggcatgggcggtttaaccgcccgg 304  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48129872 ccaatagaagagtgggtcaagagagtggctcctaacatttctctaaaataatactaataatataaaataagatattggcatgggcggtttaaccgcccgg 48129971  T
Q  305 cgacctcggtcgtc-gggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgggtgaaaatt 403  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |    
T  48129972 cgacctcggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggtgaaaact 48130071  T
Q  404 ctcacacgcaaataggctcggaaaaaacatttacctcataattttatttagcacactattgacgg 468  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48130072 ctcacacgcaaataggctcggaaaaaacatttacctcctaattttatttagcacactattgacgg 48130136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 322 - 468
Target Start/End: Original strand, 30109980 - 30110133
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-------tgaaaattctcacacgcaa 414  Q
    |||||||||||||||||||| ||||||||||| || | || ||||||||||||||||||||||||||||||||        |||||| ||||||||||||    
T  30109980 ctcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaaaaatttggacaaaatatgaaaaatctcacacgcaa 30110079  T
Q  415 ataggctcggaaaaaacatttacctcataattttatttagcacactattgacgg 468  Q
    |||||||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  30110080 ataggctcggaaaatacatttaccacctaattttatttagcacactattgacgg 30110133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 419
Target Start/End: Complemental strand, 6690419 - 6690276
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||| ||| ||      |||||||||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||    
T  6690419 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 6690320  T
Q  381 aaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||||||||||||     ||||||||||||||||||||||||    
T  6690319 aaagaaaaatttgggcaaactgaaaattctcacacgcaaatagg 6690276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 3293043 - 3292937
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||     |||||||||||||||||    
T  3293043 cgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 3292944  T
Q  413 aaatagg 419  Q
    |||||||    
T  3292943 aaatagg 3292937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 43143731 - 43143625
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||||||||     |||||||||||||||||    
T  43143731 cgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 43143632  T
Q  413 aaatagg 419  Q
    |||||||    
T  43143631 aaatagg 43143625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 42333923 - 42333817
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||| |||||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||||||||     |||||||||||||||||    
T  42333923 cgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 42333824  T
Q  413 aaatagg 419  Q
    |||||||    
T  42333823 aaatagg 42333817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 318 - 418
Target Start/End: Complemental strand, 30216889 - 30216784
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| |||||||||||||||| |||  |||||||||||||||||||||||||||||||     |||||||||||||| ||    
T  30216889 cgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgc 30216790  T
Q  413 aaatag 418  Q
    ||||||    
T  30216789 aaatag 30216784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 20129330 - 20129436
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| |||||||     
T  20129330 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgt 20129429  T
Q  413 aaatagg 419  Q
    |||||||    
T  20129430 aaatagg 20129436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 50205221 - 50205118
Alignment:
Q  321 gctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacgcaaa 415  Q
    ||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| ||||      ||||||||||||||||||||    
T  50205221 gctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaaaaagaaaaaattggacaatctgaaaattctcacacgcaaa 50205122  T
Q  416 tagg 419  Q
    ||||    
T  50205121 tagg 50205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 17511377 - 17511275
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaat 416  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| | ||||||||||    
T  17511377 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgttacacgcaaat 17511278  T
Q  417 agg 419  Q
    |||    
T  17511277 agg 17511275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 25930728 - 25930834
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||||||| |||||||||||| |||| || |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| ||||||||    
T  25930728 cgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgc 25930827  T
Q  413 aaatagg 419  Q
    |||||||    
T  25930828 aaatagg 25930834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 48989348 - 48989454
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||| ||||||||||||||||||| |||| ||||||| ||| || |||||||||||||||||||||||||||||||||     |||||||||||| ||||    
T  48989348 cgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcatacgc 48989447  T
Q  413 aaatagg 419  Q
    |||||||    
T  48989448 aaatagg 48989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 10353031 - 10352925
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||| |||||||||||||||| ||||||||||||| || || ||||||||||| |||||||| ||||||||||||     |||||||||| ||||||    
T  10353031 cgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggcaatctgaaaattcttacacgc 10352932  T
Q  413 aaatagg 419  Q
    |||||||    
T  10352931 aaatagg 10352925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 26439426 - 26439320
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  26439426 cgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtcacacgt 26439327  T
Q  413 aaatagg 419  Q
    |||||||    
T  26439326 aaatagg 26439320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 34407431 - 34407325
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  34407431 cgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtcacacgt 34407332  T
Q  413 aaatagg 419  Q
    |||||||    
T  34407331 aaatagg 34407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 43355924 - 43356030
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  43355924 cgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtcacacgt 43356023  T
Q  413 aaatagg 419  Q
    |||||||    
T  43356024 aaatagg 43356030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 44156671 - 44156777
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacgc 412  Q
    ||||||| | |||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||| |||||      ||||||||||| |||||    
T  44156671 cgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctcacgc 44156770  T
Q  413 aaatagg 419  Q
    |||||||    
T  44156771 aaatagg 44156777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 29319850 - 29319777
Alignment:
Q  320 ggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttg 393  Q
    |||||||||||||||||||||| ||||||| |||||||| | |||||||||||| |||||||||||||||||||    
T  29319850 ggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttg 29319777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 416
Target Start/End: Original strand, 35545977 - 35546076
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaat 416  Q
    ||||||||| |||||||||  || ||||||||||||| |||| |||||||||||||||||||||||| ||||||     |||||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 13012208 - 13012314
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||  ||||| || ||| |||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  13012208 cgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaattgtcacacgt 13012307  T
Q  413 aaatagg 419  Q
    |||||||    
T  13012308 aaatagg 13012314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 47500793 - 47500899
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||| |||  ||||||||||||||||     |||||||| |||||||     
T  47500793 cgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatgaaaagaaaaatttgggcaatttgaaaattgtcacacgt 47500892  T
Q  413 aaatagg 419  Q
    |||||||    
T  47500893 aaatagg 47500899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 27363381 - 27363446
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaa 383  Q
    |||||||||||||   |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  27363381 cgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaaaaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 419
Target Start/End: Original strand, 26448077 - 26448178
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaat 416  Q
    |||||||||||||||||||| |||| | | ||||||| || ||||||||||||||||||||| |||||||||||     |||||||||||| || |||||    
T  26448077 ctcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaaa-aaaaatttgggcaatctgaaaattctcatacacaaat 26448175  T
Q  417 agg 419  Q
    |||    
T  26448176 agg 26448178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 394
Target Start/End: Complemental strand, 30077776 - 30077702
Alignment:
Q  320 ggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg 394  Q
    ||||| |||||||| ||||||| ||||||||||||| || ||  |||||||||| ||||||||||||||||||||    
T  30077776 ggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttgg 30077702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 419
Target Start/End: Complemental strand, 28877396 - 28877291
Alignment:
Q  319 gggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgca 413  Q
    ||||| ||||||||||||||||| ||||||  ||||| || |||  |||||||| |||| |||||||||||||||||     | ||||||||||||||||    
T  28877396 gggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatctaaaaattctcacacgca 28877297  T
Q  414 aatagg 419  Q
    ||||||    
T  28877296 aatagg 28877291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 395
Target Start/End: Complemental strand, 29996126 - 29996053
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    |||||||||||||||||| | ||||||| ||||| || || ||||||||||| |||| ||||||||||||||||    
T  29996126 ctcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttggg 29996053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  323 tcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatt 391  Q
    ||||||||||||||||||| |||| ||||||||||| || | |||||||||||| |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 40529039 - 40529111
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg 394  Q
    |||||||||||||||||||| |||| || ||||| || | | |||||||||| ||||||||||||||||||||    
T  40529039 ctcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaatttgg 40529111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 23963046 - 23962988
Alignment:
Q  6 caaattcatggttttattttcttatg-cattttaatcttcaaatttttggttttcatct 63  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||||    
T  23963046 caaattcatggttttattttcttatgacatttcaatcttcaaatctatggttttcatct 23962988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 36382492 - 36382387
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacgc 412  Q
    ||||||||||| |||||||||||| |||| || ||||| || || ||||||||||| |||| |||||||||||||||      |||||||| ||||||||    
T  36382492 cgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttac-aaaagaaaaatttggacaatctgaaaattgtcacacgc 36382394  T
Q  413 aaatagg 419  Q
    |||||||    
T  36382393 aaatagg 36382387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 45194200 - 45194266
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaa 388  Q
    ||||||| |||||||||||| |||| || |||||||| || ||||||||||||||||||||| ||||    
T  45194200 ctcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaaaaa 45194266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 6235575 - 6235646
Alignment:
Q  353 acccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||| || ||||||||||| |||||||||||||||||||||     |||||||| |||||||||||||||    
T  6235575 acccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaatagg 6235646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 50512686 - 50512628
Alignment:
Q  6 caaattcatggttttattttcttatg-cattttaatcttcaaatttttggttttcatct 63  Q
    ||||||||| |||||||||||||||| ||||||||| |||| |||| ||||||||||||    
T  50512686 caaattcatagttttattttcttatgacattttaatattcagatttatggttttcatct 50512628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 419
Target Start/End: Original strand, 1817752 - 1817843
Alignment:
Q  333 atttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    ||||||||| |||||| |||| |||| || ||||||| ||| ||| |||||||||||||||||     | |||||||| |||||||||||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaatagg 1817843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 430 - 464
Target Start/End: Complemental strand, 12211278 - 12211244
Alignment:
Q  430 acatttacctcataattttatttagcacactattg 464  Q
    ||||||||||| |||||||||||||||||||||||    
T  12211278 acatttacctcctaattttatttagcacactattg 12211244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 466
Target Start/End: Original strand, 4325538 - 4325570
Alignment:
Q  434 ttacctcataattttatttagcacactattgac 466  Q
    ||||||| |||||||||||||||||||||||||    
T  4325538 ttacctcctaattttatttagcacactattgac 4325570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 464
Target Start/End: Complemental strand, 10632706 - 10632662
Alignment:
Q  420 ctcggaaaaaacatttacctcataattttatttagcacactattg 464  Q
    |||||||| | |||||||||| ||||||||||| |||||||||||    
T  10632706 ctcggaaatatcatttacctcctaattttattttgcacactattg 10632662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 7e-47; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 3435289 - 3435446
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-------tgaaaattctcacac 410  Q
    |||||| ||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||       |||||||||||| ||    
T  3435289 cgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctcaaac 3435388  T
Q  411 gcaaataggctcggaaaaaacatttacctcataattttatttagcacactattgacgg 468  Q
    ||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||    
T  3435389 gcaaataggcttggaaaagacatttacctcctaactttatttagcacactattgacgg 3435446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 286 - 419
Target Start/End: Original strand, 23402091 - 23402234
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||| ||| ||      ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  23402091 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaa 23402190  T
Q  381 aaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||||||||||||     ||||||||||||||||||||||||    
T  23402191 aaagaaaaatttgggcaatctgaaaattctcacacgcaaatagg 23402234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 34136972 - 34136866
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| || | |||||||||||||||||||||||||||||||     |||||||||||||||||    
T  34136972 cgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 34136873  T
Q  413 aaatagg 419  Q
    |||||||    
T  34136872 aaatagg 34136866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 4404028 - 4404134
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||| ||||||| |||||||||||||||||||||||     | |||||||||||||||    
T  4404028 cgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctaaaaattctcacacgc 4404127  T
Q  413 aaatagg 419  Q
    |||||||    
T  4404128 aaatagg 4404134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 16788172 - 16788066
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||||||||     | |||| ||||||||||    
T  16788172 cgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatcttaaaactctcacacgc 16788073  T
Q  413 aaatagg 419  Q
    |||||||    
T  16788072 aaatagg 16788066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 321 - 468
Target Start/End: Complemental strand, 40470637 - 40470484
Alignment:
Q  321 gctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg------tgaaaattctcacacgcaa 414  Q
    ||||||||||||||||||||| |||||||||||  ||| || ||||||||||||||| ||||| ||||||| ||       | |||| || |||||| ||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaattgggcaaaatctaaaaactcgcacacgtaa 40470538  T
Q  415 ataggctcggaaaaaacatttacctcataattttatttagcacactattgacgg 468  Q
    |||||||| ||||| ||||||||||  |||||||||||||||||||||||||||    
T  40470537 ataggctccgaaaagacatttaccttctaattttatttagcacactattgacgg 40470484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 320 - 419
Target Start/End: Original strand, 9877242 - 9877346
Alignment:
Q  320 ggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaa 414  Q
    |||||||| ||||||||||||| |||||||| ||||||| || | |||||||||||||||||||||||||||||||     |||||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  415 atagg 419  Q
    |||||    
T  9877342 atagg 9877346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 3648941 - 3648835
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||||||||||||||||| || ||||||| |||||||| |||||||||||||| |||||||||||||| ||||||     |||||||| ||||||||    
T  3648941 cgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtcacacgc 3648842  T
Q  413 aaatagg 419  Q
    || ||||    
T  3648841 aagtagg 3648835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 29728530 - 29728427
Alignment:
Q  321 gctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaa 415  Q
    ||||||||||||| ||||||| ||||||| |||||||| ||| |||||||||| |||||||||||||||||||||     |||||||| | |||||||||    
T  29728530 gctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtgacacgcaaa 29728431  T
Q  416 tagg 419  Q
    ||||    
T  29728430 tagg 29728427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 388
Target Start/End: Original strand, 36408538 - 36408641
Alignment:
Q  290 ggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaag 384  Q
    ||||| |||||||||||||||||| ||      |||||||||||||||||||||||| |||||| ||||||||| || ||||||||||| ||||||||||    
T  36408538 ggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaag 36408637  T
Q  385 aaaa 388  Q
    ||||    
T  36408638 aaaa 36408641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 2729380 - 2729274
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||| ||| ||      ||||||||||||||||||||| || |||| | |||| |||| |||||||||||||||||| ||    
T  2729380 gggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataa 2729281  T
Q  381 aaagaaa 387  Q
    |||||||    
T  2729280 aaagaaa 2729274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 15838306 - 15838411
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||| ||||||||||||| |||| || ||||| || || ||||||||||| |||| ||||||||||||||||     |||||||| ||||||||    
T  15838306 cgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttac-aaaagaaaaatttgggcaatctgaaaattttcacacgc 15838404  T
Q  413 aaatagg 419  Q
    |||||||    
T  15838405 aaatagg 15838411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 39914535 - 39914611
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||| ||| ||||| |||||||||||    
T  39914535 cgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttggg 39914611  T

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Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 43497406 - 43497348
Alignment:
Q  6 caaattcatggttttattttcttat-gcattttaatcttcaaatttttggttttcatct 63  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||| |||| |||||||    
T  43497406 caaattcatggttttatttttttatggcatttcaatcttcaaatttatggtcttcatct 43497348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 466
Target Start/End: Original strand, 9256512 - 9256548
Alignment:
Q  430 acatttacctcataattttatttagcacactattgac 466  Q
    ||||||||||| |||||||||||||||||||||||||    
T  9256512 acatttacctcctaattttatttagcacactattgac 9256548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 466
Target Start/End: Complemental strand, 13152445 - 13152410
Alignment:
Q  431 catttacctcataattttatttagcacactattgac 466  Q
    |||||||||| |||||||||||||||||||||||||    
T  13152445 catttacctcctaattttatttagcacactattgac 13152410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 466
Target Start/End: Original strand, 28846729 - 28846764
Alignment:
Q  431 catttacctcataattttatttagcacactattgac 466  Q
    |||||||||||||||||||||||||||||| |||||    
T  28846729 catttacctcataattttatttagcacacttttgac 28846764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 419
Target Start/End: Original strand, 42230971 - 42231063
Alignment:
Q  330 ataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||||||||| |||| | ||||| ||| || ||||||||||  |||||||||||||||||||||     |||||||||||| | |||||||||    
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaatagg 42231063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 432 - 466
Target Start/End: Original strand, 10467876 - 10467910
Alignment:
Q  432 atttacctcataattttatttagcacactattgac 466  Q
    ||||||||||||||||||||||||||| |||||||    
T  10467876 atttacctcataattttatttagcacaatattgac 10467910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 432 - 466
Target Start/End: Original strand, 24333842 - 24333876
Alignment:
Q  432 atttacctcataattttatttagcacactattgac 466  Q
    ||||||||||| |||||||||||||||||||||||    
T  24333842 atttacctcatgattttatttagcacactattgac 24333876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 14446945 - 14446990
Alignment:
Q  420 ctcggaaaaaacatttacctcataattttatttagcacactattga 465  Q
    ||||||||  ||||| ||||| ||||||||||||||||||||||||    
T  14446945 ctcggaaaggacattcacctcctaattttatttagcacactattga 14446990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 464
Target Start/End: Original strand, 32359546 - 32359579
Alignment:
Q  431 catttacctcataattttatttagcacactattg 464  Q
    |||||||||| |||||||||||||||||||||||    
T  32359546 catttacctcctaattttatttagcacactattg 32359579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 464
Target Start/End: Original strand, 32372082 - 32372115
Alignment:
Q  431 catttacctcataattttatttagcacactattg 464  Q
    |||||||||| |||||||||||||||||||||||    
T  32372082 catttacctcctaattttatttagcacactattg 32372115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 13540658 - 13540614
Alignment:
Q  125 ttattggatgaaattcatgtgagtatcacactttaaaaatggata 169  Q
    ||||| ||||||| |||||||| |||||||||||| |||||||||    
T  13540658 ttattagatgaaactcatgtgaatatcacactttagaaatggata 13540614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 13683815 - 13683859
Alignment:
Q  125 ttattggatgaaattcatgtgagtatcacactttaaaaatggata 169  Q
    ||||| ||||||| |||||||| |||||||||||| |||||||||    
T  13683815 ttattagatgaaactcatgtgaatatcacactttagaaatggata 13683859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 464
Target Start/End: Complemental strand, 24592387 - 24592355
Alignment:
Q  432 atttacctcataattttatttagcacactattg 464  Q
    ||||||||| |||||||||||||||||||||||    
T  24592387 atttacctcctaattttatttagcacactattg 24592355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 311 - 468
Target Start/End: Complemental strand, 41972429 - 41972265
Alignment:
Q  311 cggtcgtcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-------tgaaaatt 403  Q
    |||||| | |||||||||||||||||||||| |||||| |||||| || |||| ||||||||||||||||||||||||||||||        ||||||||    
T  41972429 cggtcgcctggctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaaaaagaaaaatttggaaaaaatctgaaaatt 41972330  T
Q  404 ctcacacgcaaataggctcggaaaaaacatttacctcataattttatttagcacactattgacgg 468  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  41972329 ctcacacgcaaataggcttggaaaagacatttacctcctaattttatttagcacactattgacgg 41972265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 327 - 468
Target Start/End: Original strand, 33489716 - 33489864
Alignment:
Q  327 tcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-------tgaaaattctcacacgcaaatagg 419  Q
    ||||||||||||| | ||||||| ||| | || ||||||||||||||||||| |||||||||||||| |       ||||||||||||||||||||||||    
T  33489716 tcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaaaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T
Q  420 ctcggaaaaaacatttacctcataattttatttagcacactattgacgg 468  Q
    || |||||| ||||||||||| |||||||||||||||||||||||||||    
T  33489816 cttggaaaagacatttacctcctaattttatttagcacactattgacgg 33489864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 281 - 419
Target Start/End: Original strand, 35907530 - 35907678
Alignment:
Q  281 ggcatgggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacact 375  Q
    |||||||||||||| |||||||||||||||||| ||      |||||| ||||||||||||||||| |||||||||||||||| |||| ||||  |||||    
T  35907530 ggcatgggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacact 35907629  T
Q  376 tacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    ||||||||||||| ||||||     ||||||||||||||||||||||||    
T  35907630 tacaaaaagaaaattttgggtaatctgaaaattctcacacgcaaatagg 35907678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 417
Target Start/End: Complemental strand, 42311088 - 42310984
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| |||||||||||||||||||||     |||||||| ||||||||    
T  42311088 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgc 42310989  T
Q  413 aaata 417  Q
    |||||    
T  42310988 aaata 42310984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 3829003 - 3829110
Alignment:
Q  317 tcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacg 411  Q
    ||||| ||||||||||||||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||||||||||     |||||||| ||| |||    
T  3829003 tcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatctgaaaattttcatacg 3829102  T
Q  412 caaatagg 419  Q
    ||||||||    
T  3829103 caaatagg 3829110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 17445333 - 17445439
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||| |||| |||||||||| | |||||| ||||||||| || | |||||||||||||||||||||||||||||||     |||||||||||||||||    
T  17445333 cgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 17445432  T
Q  413 aaatagg 419  Q
    |||||||    
T  17445433 aaatagg 17445439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 32982203 - 32982127
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg 394  Q
    ||||| |||||||||||||||||| ||||||||||||| || |||||||||||| | ||||||||||||||||||||    
T  32982203 cgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttgg 32982127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 321524 - 321418
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||||||||||||||||||   |||||| ||||||||| || ||||||||||| |||||||||||||||||||||     |||||||||||| | ||    
T  321524 cgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaaattctcatatgc 321425  T
Q  413 aaatagg 419  Q
    |||||||    
T  321424 aaatagg 321418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 7433468 - 7433542
Alignment:
Q  321 gctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    |||||||| |||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||| ||||||    
T  7433468 gctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttggg 7433542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 26144275 - 26144381
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  26144275 cgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaattgtcacacgt 26144374  T
Q  413 aaatagg 419  Q
    |||||||    
T  26144375 aaatagg 26144381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 35951492 - 35951427
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaa 383  Q
    |||||||||||||||||||||| | |||||  | ||||||| |||||||||||||||| |||||||    
T  35951492 cgggctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacactaacaaaaa 35951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 43683955 - 43683995
Alignment:
Q  125 ttattggatgaaattcatgtgagtatcacactttaaaaatg 165  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  43683955 ttattggatgaaattcatatgagtatcacactttaaaaatg 43683995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 24234736 - 24234678
Alignment:
Q  6 caaattcatggttttattttcttat-gcattttaatcttcaaatttttggttttcatct 63  Q
    |||||||||||||||||||||| || |||||| ||||||||||||| |||| |||||||    
T  24234736 caaattcatggttttattttctaatggcatttcaatcttcaaatttatggtcttcatct 24234678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 11843974 - 11843917
Alignment:
Q  408 cacgcaaatagg-ctcggaaaaaacatttacctcataattttatttagcacactattg 464  Q
    |||||||||||| ||| ||||  ||||||||||| |||||||||||||||||||||||    
T  11843974 cacgcaaataggtctctgaaaggacatttacctcctaattttatttagcacactattg 11843917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 431 - 464
Target Start/End: Complemental strand, 48606663 - 48606630
Alignment:
Q  431 catttacctcataattttatttagcacactattg 464  Q
    ||||||||||||||||||||||||||||||||||    
T  48606663 catttacctcataattttatttagcacactattg 48606630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 466
Target Start/End: Complemental strand, 32379908 - 32379872
Alignment:
Q  430 acatttacctcataattttatttagcacactattgac 466  Q
    ||||||||||| |||||||||||||||||||||||||    
T  32379908 acatttacctcctaattttatttagcacactattgac 32379872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 16087088 - 16087146
Alignment:
Q  6 caaattcatggttttattttcttatg-cattttaatcttcaaatttttggttttcatct 63  Q
    |||||||||||||||||||||||||| ||||  ||||||||||| | |||| |||||||    
T  16087088 caaattcatggttttattttcttatgacattaaaatcttcaaatctatggtcttcatct 16087146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 23313258 - 23313336
Alignment:
Q  318 cgggctcgatcgataattt-ttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    |||||||||| ||| |||| ||||| ||||||| ||||  || ||  |||||||||| |||||||||||||||||||||    
T  23313258 cgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttacaaaaagaaaaatttggg 23313336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 48901252 - 48901203
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccatt 367  Q
    |||| |||||||||||||| |||| ||||| |||||||||| ||||||||    
T  48901252 cggggtcgatcgataatttatgcacattaggcccaacccaaaagcccatt 48901203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 466
Target Start/End: Original strand, 30054944 - 30054980
Alignment:
Q  430 acatttacctcataattttatttagcacactattgac 466  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  30054944 acatttacctcctaattttatttagcacattattgac 30054980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 464
Target Start/End: Complemental strand, 30559055 - 30559023
Alignment:
Q  432 atttacctcataattttatttagcacactattg 464  Q
    ||||||||| |||||||||||||||||||||||    
T  30559055 atttacctcctaattttatttagcacactattg 30559023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 463
Target Start/End: Complemental strand, 40864770 - 40864738
Alignment:
Q  431 catttacctcataattttatttagcacactatt 463  Q
    |||||||||| ||||||||||||||||||||||    
T  40864770 catttacctcctaattttatttagcacactatt 40864738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 320 - 466
Target Start/End: Original strand, 28801309 - 28801462
Alignment:
Q  320 ggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-------tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||| |||||| |||| |||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  28801309 ggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaattctcacacgc 28801408  T
Q  413 aaataggctcggaaaaaacatttacctcataattttatttagcacactattgac 466  Q
    |||||||||| ||||| ||||||| ||| |||||||||||||| ||||||||||    
T  28801409 aaataggctcagaaaagacatttaactcctaattttatttagctcactattgac 28801462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 286 - 419
Target Start/End: Complemental strand, 17332735 - 17332592
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||| ||| |||     ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  17332735 gggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaa 17332636  T
Q  381 aaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||||||||||||     |||||||| |||||||||||||||    
T  17332635 aaagaaaaatttgggcaatctgaaaattttcacacgcaaatagg 17332592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 281 - 419
Target Start/End: Complemental strand, 31501905 - 31501757
Alignment:
Q  281 ggcatgggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacact 375  Q
    |||| ||||||||| |||||||||||||| ||| ||      |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||    
T  31501905 ggcaggggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacact 31501806  T
Q  376 tacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    ||||||||||||||||||||     ||||||||||| ||||||||||||    
T  31501805 tacaaaaagaaaaatttgggcaatctgaaaattctcgcacgcaaatagg 31501757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 33430341 - 33430447
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||     |||||||||||||||||    
T  33430341 cgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 33430440  T
Q  413 aaatagg 419  Q
    |||||||    
T  33430441 aaatagg 33430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 320 - 419
Target Start/End: Original strand, 37254663 - 37254767
Alignment:
Q  320 ggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaa 414  Q
    |||||||||||||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  37254663 ggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 37254762  T
Q  415 atagg 419  Q
    |||||    
T  37254763 atagg 37254767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 13817996 - 13818103
Alignment:
Q  317 tcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacg 411  Q
    ||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| |||||||    
T  13817996 tcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 13818095  T
Q  412 caaatagg 419  Q
    ||||||||    
T  13818096 caaatagg 13818103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 10033947 - 10034053
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| ||||||||    
T  10033947 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgc 10034046  T
Q  413 aaatagg 419  Q
    |||||||    
T  10034047 aaatagg 10034053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 12279003 - 12278901
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaat 416  Q
    |||||||||||||||||||| ||||||||||||||||  ||| |||||||||||||||||||||||||||||||     |||||||||||||||||||||    
T  12279003 ctcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaat 12278904  T
Q  417 agg 419  Q
    |||    
T  12278903 agg 12278901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 419
Target Start/End: Original strand, 31680345 - 31680493
Alignment:
Q  281 ggcatgggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacact 375  Q
    |||| ||||||||| |||||||||||||| ||| ||      ||||||||||||||||||||| |  |||||||||||||||| |||| |||||||||||    
T  31680345 ggcaggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacact 31680444  T
Q  376 tacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    ||||||||||||||||||||     |||||||||||||| |||||||||    
T  31680445 tacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaaatagg 31680493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 419
Target Start/End: Complemental strand, 39657654 - 39657547
Alignment:
Q  317 tcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacg 411  Q
    ||||||||||| ||||||||||||| ||||||| |||||||| ||| |||||||||| |||||||||||||||||||||     |||||||| |||||||    
T  39657654 tcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 39657555  T
Q  412 caaatagg 419  Q
    ||||||||    
T  39657554 caaatagg 39657547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 16155017 - 16155123
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| ||| |||||||||||||| ||     |||||||| ||||||||    
T  16155017 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacacgc 16155116  T
Q  413 aaatagg 419  Q
    |||||||    
T  16155117 aaatagg 16155123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 36293764 - 36293662
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaat 416  Q
    |||||||||||||||||| | ||||||| |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| ||||||| ||||    
T  36293764 ctcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaat 36293665  T
Q  417 agg 419  Q
    |||    
T  36293664 agg 36293662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 39434716 - 39434793
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    ||||||||||||||||||||| || ||||||| |||||||| |||||||||||||| |||||||| ||||||||||||    
T  39434716 cgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaatgaaaaatttggg 39434793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 43068897 - 43068974
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    ||||||||||| ||||||||| || |||||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  43068897 cgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttggg 43068974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 328 - 419
Target Start/End: Complemental strand, 16334013 - 16333917
Alignment:
Q  328 cgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||||||||||| ||||||  |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| |||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaatagg 16333917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 396
Target Start/End: Original strand, 19985962 - 19986037
Alignment:
Q  321 gctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgggt 396  Q
    ||||||||||||||||||||| ||||||  |||||||| || |||||| |||| ||||||||||||||||||||||    
T  19985962 gctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggt 19986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 1776523 - 1776417
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||| | |||| |  ||||| || || ||||||||||| |||||||||||||||||||||     |||||||| ||||||||    
T  1776523 cgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgc 1776424  T
Q  413 aaatagg 419  Q
    |||||||    
T  1776423 aaatagg 1776417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 26283465 - 26283359
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||  |||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  26283465 cgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtcacacgt 26283366  T
Q  413 aaatagg 419  Q
    |||||||    
T  26283365 aaatagg 26283359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 3155779 - 3155673
Alignment:
Q  317 tcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacg 411  Q
    |||||||||||| |||||||||||| ||| ||| ||||| || || ||||||||||| ||| ||||||||||||||||      |||||||| |||||||    
T  3155779 tcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggacaatctgaaaattgtcacacg 3155680  T
Q  412 caaatag 418  Q
    |||||||    
T  3155679 caaatag 3155673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 36291391 - 36291468
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    |||| |||||| |||||||||||| |||||| | |||| || ||  |||||||||| |||||||||||||||||||||    
T  36291391 cgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttggg 36291468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 203963 - 204009
Alignment:
Q  420 ctcggaaaaaacatttacctcataattttatttagcacactattgac 466  Q
    ||||||||  ||||||||||| |||||||||||||||||||||||||    
T  203963 ctcggaaaggacatttacctcctaattttatttagcacactattgac 204009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 192048 - 192116
Alignment:
Q  398 aaaattctcacacgcaaataggct-cggaaaaaacatttacctcataattttatttagcacactattga 465  Q
    |||||||||||||||||| ||| | ||||||| | ||||||||  |||||||||||| |||||||||||    
T  192048 aaaattctcacacgcaaagaggtttcggaaaagatatttaccttctaattttatttaacacactattga 192116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 466
Target Start/End: Original strand, 3055606 - 3055641
Alignment:
Q  431 catttacctcataattttatttagcacactattgac 466  Q
    |||||||||| |||||||||||||||||||||||||    
T  3055606 catttacctcctaattttatttagcacactattgac 3055641  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 202659 - 202724
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaa 383  Q
    ||||||||||||||||||| || | |||||  | ||||||| |||||||||| ||||| |||||||    
T  202659 cgggctcgatcgataatttgtgtacattaggtcgaacccaaaagcccattaagacactaacaaaaa 202724  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 464
Target Start/End: Original strand, 22542010 - 22542043
Alignment:
Q  431 catttacctcataattttatttagcacactattg 464  Q
    ||||||||||||||||||||||||||| ||||||    
T  22542010 catttacctcataattttatttagcacgctattg 22542043  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 464
Target Start/End: Complemental strand, 22712950 - 22712917
Alignment:
Q  431 catttacctcataattttatttagcacactattg 464  Q
    |||||||||| |||||||||||||||||||||||    
T  22712950 catttacctcctaattttatttagcacactattg 22712917  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 464
Target Start/End: Complemental strand, 27168854 - 27168821
Alignment:
Q  431 catttacctcataattttatttagcacactattg 464  Q
    |||||||||| |||||||||||||||||||||||    
T  27168854 catttacctcctaattttatttagcacactattg 27168821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 36301895 - 36301854
Alignment:
Q  124 tttattggatgaaattcatgtgagtatcacactttaaaaatg 165  Q
    |||||||||||||| |||||||||| |||||||||| |||||    
T  36301895 tttattggatgaaactcatgtgagtctcacactttagaaatg 36301854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 38269449 - 38269409
Alignment:
Q  424 gaaaaaacatttacctcataattttatttagcacactattg 464  Q
    ||||| ||||||||||| ||||||||||| |||||||||||    
T  38269449 gaaaagacatttacctcctaattttatttggcacactattg 38269409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 6e-41; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 320 - 468
Target Start/End: Original strand, 5135291 - 5135446
Alignment:
Q  320 ggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgggt-------gaaaattctcacacgc 412  Q
    |||||||||||| ||||||| | ||||||||||||| || ||| |||||||||||||||||||||||||||||||         |||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  413 aaataggctcggaaaaaacatttacctcataattttatttagcacactattgacgg 468  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  5135391 aaataggctaggaaaaaaaatttacctcataattttatttagcacactattgacgg 5135446  T

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Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 320 - 419
Target Start/End: Complemental strand, 11018357 - 11018253
Alignment:
Q  320 ggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaa 414  Q
    |||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  11018357 ggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 11018258  T
Q  415 atagg 419  Q
    |||||    
T  11018257 atagg 11018253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 419
Target Start/End: Original strand, 45182964 - 45183107
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||| ||| ||      |||||||||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||    
T  45182964 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 45183063  T
Q  381 aaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||||||||||||     ||||||||||||||| ||||||||    
T  45183064 aaagaaaaatttgggcaatctgaaaattctcacacacaaatagg 45183107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 393
Target Start/End: Original strand, 33040936 - 33041048
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcg-----tcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||| ||| ||     ||||||||||| |||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  33040936 gggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaa 33041035  T
Q  381 aaagaaaaatttg 393  Q
    |||||||||||||    
T  33041036 aaagaaaaatttg 33041048  T

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Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 27935198 - 27935304
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||     |||||||||||| |||     
T  27935198 cgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcatacga 27935297  T
Q  413 aaatagg 419  Q
    |||||||    
T  27935298 aaatagg 27935304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 286 - 419
Target Start/End: Complemental strand, 6931078 - 6930935
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||| ||| ||      |||||||||||||||||||||||  |||||| ||||||||| |||| ||||||||| ||||||    
T  6931078 gggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaa 6930979  T
Q  381 aaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||||||||| ||     ||||||||||||||||||||||||    
T  6930978 aaagaaaaatttaggcaatctgaaaattctcacacgcaaatagg 6930935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 6269569 - 6269467
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaat 416  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| ||||||| ||||    
T  6269569 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaat 6269470  T
Q  417 agg 419  Q
    |||    
T  6269469 agg 6269467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 22968591 - 22968514
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    |||||||||||||||||||||||| |||||||  ||||||| |||||||||||||| |||||||||||||||||||||    
T  22968591 cgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttggg 22968514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 39771810 - 39771916
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  39771810 cgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtcacacgt 39771909  T
Q  413 aaatagg 419  Q
    |||||||    
T  39771910 aaatagg 39771916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 392
Target Start/End: Complemental strand, 6503757 - 6503642
Alignment:
Q  282 gcatgggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacactt 376  Q
    ||||||||||||| |||| ||||||||| ||| ||      |||||||||||||| ||||||||| ||||||| |||||||| |||| |||| |||||||    
T  6503757 gcatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactt 6503658  T
Q  377 acaaaaagaaaaattt 392  Q
    ||||||||||||||||    
T  6503657 acaaaaagaaaaattt 6503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 418
Target Start/End: Complemental strand, 40081886 - 40081782
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||| | ||||||| ||||| || ||| |||||||||| |||||||||||||||||||||     |||||||| ||||||||    
T  40081886 cgggctcgatcgataatttttgaacattagactcaaccaaa-agctcattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgc 40081788  T
Q  413 aaatag 418  Q
    ||||||    
T  40081787 aaatag 40081782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 19390166 - 19390272
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||| ||||||||||||||||||| ||||||| ||||| || || | ||||||||| |||||||||||||||||||||     |||||||| |||||||     
T  19390166 cgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgt 19390265  T
Q  413 aaatagg 419  Q
    |||||||    
T  19390266 aaatagg 19390272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 326 - 419
Target Start/End: Complemental strand, 19565640 - 19565542
Alignment:
Q  326 atcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacgcaaatagg 419  Q
    |||||||||||||||| ||||||||||||| || |  ||||||||||| ||||||||||||||||||||      |||||||||| |||||||||||||    
T  19565640 atcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggacaatctgaaaattcttacacgcaaatagg 19565542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 34084265 - 34084163
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaat 416  Q
    |||||||||||||||||||| |||| |  ||||| || || ||||||||||| |||||||||||||||||||||     |||||||| ||||||||||||    
T  34084265 ctcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaatatgaaaattatcacacgcaaat 34084166  T
Q  417 agg 419  Q
    |||    
T  34084165 agg 34084163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 419
Target Start/End: Original strand, 45335858 - 45336000
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||||||| ||      ||| ||| ||||||||||||| || ||||||||||||| || || | ||||||||| ||||||    
T  45335858 gggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtc-attaacacatttacaa 45335956  T
Q  381 aaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||||||| ||||     |||||||||| |||||||||||||    
T  45335957 aaagaaaaatctgggcaatctgaaaattcttacacgcaaatagg 45336000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 38282497 - 38282563
Alignment:
Q  398 aaaattctcacacgcaaatagg-ctcggaaaaaacatttacctcataattttatttagcacactatt 463  Q
    |||||||||||| ||||| ||| |||||||| | |||||||||||||||||||||||||||||||||    
T  38282497 aaaattctcacatgcaaagaggtctcggaaagagcatttacctcataattttatttagcacactatt 38282563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 35514286 - 35514388
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacgc 412  Q
    |||||||||||||||||||| ||||| |||| ||||||||| || ||||||||||    ||||||||||||||||||      ||||||||||||| |||    
T  35514286 cgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacac----acaaaaagaaaaatttggacaatatgaaaattctcactcgc 35514381  T
Q  413 aaatagg 419  Q
    |||||||    
T  35514382 aaatagg 35514388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 2397985 - 2397927
Alignment:
Q  6 caaattcatggttttattttcttatg-cattttaatcttcaaatttttggttttcatct 63  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||    
T  2397985 caaattcatggttttattttcttatgacatttcaatcttcaaatttatggtcttcatct 2397927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 429 - 466
Target Start/End: Original strand, 51262101 - 51262138
Alignment:
Q  429 aacatttacctcataattttatttagcacactattgac 466  Q
    |||||||||||| |||||||||||||||||||||||||    
T  51262101 aacatttacctcctaattttatttagcacactattgac 51262138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 13639450 - 13639509
Alignment:
Q  124 tttattggatgaaattcatgtgagtatcacactttaaaaatggatatcatataaaatggt 183  Q
    |||||||||||||||||||||| ||||||||| ||  |||||||| ||| ||||| ||||    
T  13639450 tttattggatgaaattcatgtgggtatcacacattggaaatggatctcacataaagtggt 13639509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 464
Target Start/End: Original strand, 9743393 - 9743425
Alignment:
Q  432 atttacctcataattttatttagcacactattg 464  Q
    ||||||||| |||||||||||||||||||||||    
T  9743393 atttacctcgtaattttatttagcacactattg 9743425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 464
Target Start/End: Original strand, 43137251 - 43137283
Alignment:
Q  432 atttacctcataattttatttagcacactattg 464  Q
    ||||||||| |||||||||||||||||||||||    
T  43137251 atttacctcctaattttatttagcacactattg 43137283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 322 - 467
Target Start/End: Complemental strand, 4555354 - 4555202
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-------tgaaaattctcacacgcaa 414  Q
    |||||||||||||||||||| || | ||||||||||| ||| | ||||||||||||||||||||||| ||||||       |||||||||||||||| ||    
T  4555354 ctcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctgaaaattctcacacgtaa 4555255  T
Q  415 ataggctcggaaaaaacatttacctcataattttatttagcacactattgacg 467  Q
    ||||||||| |||| ||||||||||  |||||||||||| |||||||||||||    
T  4555254 ataggctcgaaaaagacatttaccttttaattttatttaccacactattgacg 4555202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 771019 - 771125
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  771019 cgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 771118  T
Q  413 aaatagg 419  Q
    |||||||    
T  771119 aaatagg 771125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 419
Target Start/End: Original strand, 45418566 - 45418709
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||| ||| ||      |||||||||||||||||||||||  |||||| ||||||||| |||| ||||||||||||||||    
T  45418566 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaa 45418665  T
Q  381 aaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||||||||||||     ||||||||||||||||||||||||    
T  45418666 aaagaaaaatttgggcaatctgaaaattctcacacgcaaatagg 45418709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 41251781 - 41251675
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| |||||||     
T  41251781 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgt 41251682  T
Q  413 aaatagg 419  Q
    |||||||    
T  41251681 aaatagg 41251675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 42440006 - 42440112
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| |||||||  ||||||| |||||||||||||| |||||||||||||||||||||     |||||||| ||||||||    
T  42440006 cgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgc 42440105  T
Q  413 aaatagg 419  Q
    |||||||    
T  42440106 aaatagg 42440112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 417
Target Start/End: Complemental strand, 12756984 - 12756880
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||| ||||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||||||||||||||| |     |||||||||||||||||    
T  12756984 cgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 12756885  T
Q  413 aaata 417  Q
    |||||    
T  12756884 aaata 12756880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 44084750 - 44084644
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| |||| |||||| |||| ||  ||||||||||||||||||||||||||||||||     |||||||||||| ||||    
T  44084750 cgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcatacgc 44084651  T
Q  413 aaatagg 419  Q
    |||||||    
T  44084650 aaatagg 44084644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 320 - 419
Target Start/End: Complemental strand, 31581767 - 31581663
Alignment:
Q  320 ggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaa 414  Q
    ||||||| ||||| |||||||||||||||| || ||||| |||||||||||||| |||||||||||||||||||||     |||||||| ||||||||||    
T  31581767 ggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaa 31581668  T
Q  415 atagg 419  Q
    |||||    
T  31581667 atagg 31581663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 418
Target Start/End: Original strand, 8147334 - 8147477
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcgt-----cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||| ||| ||      ||||||||||||||||| |||||| |||||||||||| ||| || | ||||||||||||||||    
T  8147334 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaa 8147433  T
Q  381 aaagaaaaatttggg-----tg-aaaattctcacacgcaaatag 418  Q
    |||||||||||||||     || |||||||||||||||||||||    
T  8147434 aaagaaaaatttgggcaatctgaaaaattctcacacgcaaatag 8147477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 2958247 - 2958142
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||| ||| ||||||| |||||||| |||||||||||||| ||||||| |||||||||||||     |||||||| ||||||||    
T  2958247 cgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatttacaaagagaaaaatttgggtaatctgaaaattgtcacacgc 2958149  T
Q  413 aaatagg 419  Q
    |||||||    
T  2958148 aaatagg 2958142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 394
Target Start/End: Complemental strand, 8059478 - 8059404
Alignment:
Q  320 ggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg 394  Q
    ||||| |||||||||||||||| ||||||  |||||||| |||| ||||||||||||||||||||||||||||||    
T  8059478 ggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttgg 8059404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 18981636 - 18981742
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||| ||||||||||||| ||||||| |||||||| || ||||||| ||| |||||||||||||||||||||     | |||||| ||||||||    
T  18981636 cgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggcaatttaaaaattgtcacacgc 18981735  T
Q  413 aaatagg 419  Q
    |||||||    
T  18981736 aaatagg 18981742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 35962735 - 35962841
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||  ||||||||| |||||||||||||| ||||||     |||||||| |||||| |    
T  35962735 cgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtcacacac 35962834  T
Q  413 aaatagg 419  Q
    |||||||    
T  35962835 aaatagg 35962841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 17445183 - 17445082
Alignment:
Q  321 gctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaa 415  Q
    |||||||||||||||||||||   ||||| |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| ||||||| |||    
T  17445183 gctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaa 17445086  T
Q  416 tagg 419  Q
    ||||    
T  17445085 tagg 17445082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 468
Target Start/End: Complemental strand, 7072699 - 7072540
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacac--ttacaaaaagaaaaatttggg-------tgaaaattctcac 408  Q
    |||||||||||||||||||||  | |||| || |||||||| |||||||||||||||  ||| ||||||||||  ||||        ||||||||||| |    
T  7072699 cgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctgaaaattctcgc 7072600  T
Q  409 acgcaaataggctcggaa-aaaacatttacctcataattttatttagcacactattgacgg 468  Q
    ||| |||||||||||||| ||||||| |||||| ||||||||||||| |||| ||||||||    
T  7072599 acgtaaataggctcggaaaaaaacatctacctcctaattttatttagtacac-attgacgg 7072540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 6403951 - 6403845
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||  |||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  6403951 cgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtcacacgt 6403852  T
Q  413 aaatagg 419  Q
    |||||||    
T  6403851 aaatagg 6403845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 26237977 - 26238053
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    ||||||||||||||| |||||||| ||||||  ||| |||| || |||||||||||||||||||||||||||||||||    
T  26237977 cgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttggg 26238053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 418
Target Start/End: Complemental strand, 32127288 - 32127183
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||||||| |||||||||||| |||| || | |||||| ||| |||||||||| |||||||||||||||||| ||     |||||||| ||||||||    
T  32127288 cgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggcaatctgaaaattgtcacacgc 32127189  T
Q  413 aaatag 418  Q
    ||||||    
T  32127188 aaatag 32127183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 394
Target Start/End: Original strand, 16405620 - 16405696
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg 394  Q
    ||||||| ||||||||||||||||  |||||| |||||||| ||| |||||||||| ||| ||||||||||||||||    
T  16405620 cgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttgg 16405696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 26162846 - 26162769
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    |||||||  |||||||||||| || |||| |  |||||||| | ||||||||||||||||||||||||||||||||||    
T  26162846 cgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttggg 26162769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 45121320 - 45121389
Alignment:
Q  396 tgaaaattctcacacgcaaatagg-ctcggaaaaaacatttacctcataattttatttagcacactattg 464  Q
    ||||||||| |||||||||| ||| ||||||||| ||||||||||| ||||||||||||| |||||||||    
T  45121320 tgaaaattcccacacgcaaagaggtctcggaaaagacatttacctcctaattttatttagaacactattg 45121389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 34905968 - 34906028
Alignment:
Q  317 tcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacactta 377  Q
    ||||||||||||||||||||||||| ||||  || ||||||| ||||||||||||||||||    
T  34905968 tcgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacacactta 34906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 12539689 - 12539732
Alignment:
Q  423 ggaaaaaacatttacctcataattttatttagcacactattgac 466  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  12539689 ggaaagaacatttacctcctaattttatttagcacactattgac 12539732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 323 - 419
Target Start/End: Original strand, 2285887 - 2285988
Alignment:
Q  323 tcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaata 417  Q
    ||||||||||||||||||| |||| | |||||| || || | ||||||||| |||| ||| |||||||||| |     |||||||| |||||||||||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  418 gg 419  Q
    ||    
T  2285987 gg 2285988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 466
Target Start/End: Original strand, 13309713 - 13309748
Alignment:
Q  431 catttacctcataattttatttagcacactattgac 466  Q
    ||||||||||||||| ||||||||||||||||||||    
T  13309713 catttacctcataatattatttagcacactattgac 13309748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 6e-32; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 34389203 - 34389097
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| |||||||||||||||| |||  |||||||||||||||||||||||||||||||     |||||||||||||||||    
T  34389203 cgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 34389104  T
Q  413 aaatagg 419  Q
    |||||||    
T  34389103 aaatagg 34389097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 35090188 - 35090294
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||     |||||||||||||||||    
T  35090188 cgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaattctcacacgc 35090287  T
Q  413 aaatagg 419  Q
    |||||||    
T  35090288 aaatagg 35090294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 360 - 468
Target Start/End: Complemental strand, 10868580 - 10868465
Alignment:
Q  360 agcccattaacacacttacaaaaagaaaaatttggg-------tgaaaattctcacacgcaaataggctcggaaaaaacatttacctcataattttattt 452  Q
    |||||||||||||| |||||||||||||||||||||       ||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  10868580 agcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaataggctcggaaaagacatttacctcctaattttattt 10868481  T
Q  453 agcacactattgacgg 468  Q
    |||||||| |||||||    
T  10868480 agcacacttttgacgg 10868465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 317 - 417
Target Start/End: Original strand, 33685583 - 33685688
Alignment:
Q  317 tcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacg 411  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||     |||||||||||| |||    
T  33685583 tcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcatacg 33685682  T
Q  412 caaata 417  Q
    ||||||    
T  33685683 caaata 33685688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 419
Target Start/End: Complemental strand, 37002328 - 37002185
Alignment:
Q  286 gggcggtttaaccgcccggcgacctcggtcg-----tcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaa 380  Q
    ||||||||| |||||||||||||| ||| ||     |||| |||||||||||||||||||| ||||||||||| |||| || | ||||||||||||||||    
T  37002328 gggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaa 37002229  T
Q  381 aaagaaaaatttggg-----tgaaaattctcacacgcaaatagg 419  Q
    |||||||||||||||     ||||||||||||||||||||||||    
T  37002228 aaagaaaaatttgggcaatctgaaaattctcacacgcaaatagg 37002185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 3114243 - 3114137
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||     |||||||| |||||| |    
T  3114243 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacac 3114144  T
Q  413 aaatagg 419  Q
    |||||||    
T  3114143 aaatagg 3114137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 38638380 - 38638277
Alignment:
Q  321 gctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaa 415  Q
    ||||||| ||||||||||||| |||||| ||||||||| || | |||||||||||||||||||||||||||||||     ||||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  416 tagg 419  Q
    ||||    
T  38638280 tagg 38638277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 5555507 - 5555613
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||| || |||||||||||||||||||||     |||||||| |||||| |    
T  5555507 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacac 5555606  T
Q  413 aaatagg 419  Q
    |||||||    
T  5555607 aaatagg 5555613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 8867878 - 8867772
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| ||||| ||| |||||||||||||||||||||      ||||||| ||||||||    
T  8867878 cgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggcaatcggaaaattttcacacgc 8867779  T
Q  413 aaatagg 419  Q
    |||||||    
T  8867778 aaatagg 8867772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 14777254 - 14777148
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||| |||||||||| |||||||||||||||||||||     |||||||| |||||||     
T  14777254 cgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgt 14777155  T
Q  413 aaatagg 419  Q
    |||||||    
T  14777154 aaatagg 14777148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 419
Target Start/End: Original strand, 26624766 - 26624872
Alignment:
Q  319 gggctcgat-cgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||   |||||||||||||||||||||||||||||||     |||||||||||||||||    
T  26624766 gggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 26624865  T
Q  413 aaatagg 419  Q
    |||||||    
T  26624866 aaatagg 26624872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 36630836 - 36630942
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| |||| || ||||| || || ||||||||||| |||||||||||||||||||||     |||||||| ||||||||    
T  36630836 cgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgc 36630935  T
Q  413 aaatagg 419  Q
    |||||||    
T  36630936 aaatagg 36630942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 419
Target Start/End: Complemental strand, 43184616 - 43184509
Alignment:
Q  317 tcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacg 411  Q
    |||||||||||||||||||||| |  || ||||  ||||||| |||| ||||||| |||||||||||||||||||||||     ||||||||||||||||    
T  43184616 tcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 43184517  T
Q  412 caaatagg 419  Q
    ||||||||    
T  43184516 caaatagg 43184509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 322 - 419
Target Start/End: Original strand, 36658205 - 36658307
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaat 416  Q
    |||||||||||||||||||| ||| ||||||||| || |||| ||||||| ||| ||||||| |||||||||||     |||||||||||||||||||||    
T  36658205 ctcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacacgcaaat 36658304  T
Q  417 agg 419  Q
    |||    
T  36658305 agg 36658307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 40920150 - 40920044
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||   ||||||| |||| ||||||||| ||||||||||||||||||||      |||||||||||||| ||    
T  40920150 cgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgc 40920051  T
Q  413 aaatagg 419  Q
    |||||||    
T  40920050 aaatagg 40920044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 8394145 - 8394251
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| |||| || ||||| || || ||||||||||| |||||||| ||||||||||||     |||||||| |||||||     
T  8394145 cgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggcaatctgaaaattgtcacacgt 8394244  T
Q  413 aaatagg 419  Q
    |||||||    
T  8394245 aaatagg 8394251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 32064587 - 32064531
Alignment:
Q  7 aaattcatggttttattttcttatgcattttaatcttcaaatttttggttttcatct 63  Q
    |||||||||||||||||||  ||||||||| ||||||||||||| ||||||||||||    
T  32064587 aaattcatggttttatttttatatgcatttcaatcttcaaatttatggttttcatct 32064531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 7002745 - 7002851
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacgc 412  Q
    |||||||||||||  ||||||  | |||| ||||||||||| |||| |||||||||| |||||||| ||||||||||      | |||||||||||||||    
T  7002745 cgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggacaatctaaaaattctcacacgc 7002844  T
Q  413 aaatagg 419  Q
    |||||||    
T  7002845 aaatagg 7002851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 7048616 - 7048722
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacgc 412  Q
    |||||||||||||  ||||||  | |||| ||||||||||| |||| |||||||||| |||||||| ||||||||||      | |||||||||||||||    
T  7048616 cgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggacaatctaaaaattctcacacgc 7048715  T
Q  413 aaatagg 419  Q
    |||||||    
T  7048716 aaatagg 7048722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 48765973 - 48766031
Alignment:
Q  6 caaattcatggttttattttcttat-gcattttaatcttcaaatttttggttttcatct 63  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||    
T  48765973 caaattcatggttttattttcttatggcatttcaatcttcaaatttatggtcttcatct 48766031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 557509 - 557466
Alignment:
Q  125 ttattggatgaaattcatgtgagtatcacactttaaaaatggat 168  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||    
T  557509 ttattggatgaaattcatgtgggtatcacacattaaaaatggat 557466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 14088861 - 14088907
Alignment:
Q  420 ctcggaaaaaacatttacctcataattttatttagcacactattgac 466  Q
    |||||||||  |||||||||| |||||||||||||||||||||||||    
T  14088861 ctcggaaaaggcatttacctcctaattttatttagcacactattgac 14088907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 14398879 - 14398925
Alignment:
Q  420 ctcggaaaaaacatttacctcataattttatttagcacactattgac 466  Q
    |||||||||  |||||||||| |||||||||||||||||||||||||    
T  14398879 ctcggaaaaggcatttacctcctaattttatttagcacactattgac 14398925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 388
Target Start/End: Original strand, 26502830 - 26502899
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaa 388  Q
    |||||||||||||   |||||||||||||  |||||||||| ||||||||||||||| |||||||| ||||    
T  26502830 cgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaaaaaa 26502899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 388
Target Start/End: Complemental strand, 26589884 - 26589815
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaa 388  Q
    |||||||||||||   |||||||||||||  |||||||||| ||||||||||||||| |||||||| ||||    
T  26589884 cgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaaaaaa 26589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 466
Target Start/End: Complemental strand, 26782366 - 26782330
Alignment:
Q  430 acatttacctcataattttatttagcacactattgac 466  Q
    ||||||||||| |||||||||||||||||||||||||    
T  26782366 acatttacctcctaattttatttagcacactattgac 26782330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 32498859 - 32498803
Alignment:
Q  127 attggatgaaattcatgtgagtatcacactttaaaaatggatatcatataaaatggt 183  Q
    |||| |||||| |||||||||  ||||||||||||||| ||| ||||||||||||||    
T  32498859 attgaatgaaactcatgtgagcttcacactttaaaaatagatctcatataaaatggt 32498803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 466
Target Start/End: Complemental strand, 38575349 - 38575305
Alignment:
Q  422 cggaaaaaacatttacctcataattttatttagcacactattgac 466  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||    
T  38575349 cggaaagaacatttacctcctaattttatttagcacgctattgac 38575305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 466
Target Start/End: Original strand, 9230525 - 9230560
Alignment:
Q  431 catttacctcataattttatttagcacactattgac 466  Q
    |||||||||| |||||||||||||||||||||||||    
T  9230525 catttacctcctaattttatttagcacactattgac 9230560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 438 - 468
Target Start/End: Original strand, 33685692 - 33685722
Alignment:
Q  438 ctcataattttatttagcacactattgacgg 468  Q
    |||||||||||||||||||||||||||||||    
T  33685692 ctcataattttatttagcacactattgacgg 33685722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 466
Target Start/End: Complemental strand, 27387366 - 27387322
Alignment:
Q  422 cggaaaaaacatttacctcataattttatttagcacactattgac 466  Q
    |||||| | |||||||||| |||||||||||||||| ||||||||    
T  27387366 cggaaagagcatttacctcctaattttatttagcacgctattgac 27387322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 31500 - 31606
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||      ||||||||||||| |||    
T  31500 cgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggacaatctgaaaattctcactcgc 31599  T
Q  413 aaatagg 419  Q
    |||||||    
T  31600 aaatagg 31606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 17862 - 17939
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  17862 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttggg 17939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 28996753 - 28996856
Alignment:
Q  321 gctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgcaaa 415  Q
    ||||||||||||||||||||  ||||||||||||| || || | |||||||||||||||||||||||||||||||     ||||||||||||||||||||    
T  28996753 gctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 28996852  T
Q  416 tagg 419  Q
    ||||    
T  28996853 tagg 28996856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 320 - 395
Target Start/End: Complemental strand, 34948903 - 34948828
Alignment:
Q  320 ggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  34948903 ggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttggg 34948828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 18339126 - 18339232
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||||||| |||||||||||| ||||||||||| | || |||| |||||||||||||||||||||||| ||||||     |||||||||||||| ||    
T  18339126 cgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacatgc 18339225  T
Q  413 aaatagg 419  Q
    |||||||    
T  18339226 aaatagg 18339232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 13837840 - 13837947
Alignment:
Q  317 tcgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacg 411  Q
    ||||| ||||||||||||||||| | ||||||| |||||||| ||| ||| |||||| |||||||||||||||||||||     |||||||| |||||||    
T  13837840 tcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 13837939  T
Q  412 caaatagg 419  Q
    ||||||||    
T  13837940 caaatagg 13837947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 398637 - 398743
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  398637 cgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaattgtcacacgt 398736  T
Q  413 aaatagg 419  Q
    |||||||    
T  398737 aaatagg 398743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 29743303 - 29743409
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||| |||||||||||||||| ||||||||||||| || ||  |||||||||| ||||| |||||||||||||||     |||||||||| ||||||    
T  29743303 cgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctgaaaattcttacacgc 29743402  T
Q  413 aaatagg 419  Q
    |||||||    
T  29743403 aaatagg 29743409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 33229483 - 33229406
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg 395  Q
    |||||||||||||| ||||||| | |||||||||||||||| || ||||||||||| || ||||||||||||||||||    
T  33229483 cgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttggg 33229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 24697964 - 24697899
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaa 383  Q
    ||||||| ||||||||||||| || ||||| |||||||||| ||||||||||||||||||||||||    
T  24697964 cgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaaaa 24697899  T

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Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 31028507 - 31028435
Alignment:
Q  322 ctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg 394  Q
    |||||||||||||||||||| |||||| |||||| || ||| |||||||||| |||||||||| ||| |||||    
T  31028507 ctcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaaggaaattttgg 31028435  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 4137421 - 4137377
Alignment:
Q  6 caaattcatggttttattttcttatg-cattttaatcttcaaatt 49  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||    
T  4137421 caaattcatggttttattttcttatgacatttcaatcttcaaatt 4137377  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 466
Target Start/End: Original strand, 11971083 - 11971118
Alignment:
Q  431 catttacctcataattttatttagcacactattgac 466  Q
    |||||||||| |||||||||||||||||||||||||    
T  11971083 catttacctcctaattttatttagcacactattgac 11971118  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 3050976 - 3051022
Alignment:
Q  420 ctcggaaaaaacatttacctcataattttatttagcacactattgac 466  Q
    |||||||| | |||||||| | |||||||||||||||||||||||||    
T  3050976 ctcggaaagagcatttaccacctaattttatttagcacactattgac 3051022  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 9033152 - 9033205
Alignment:
Q  125 ttattggatgaaattcatgtgagtatcacactttaaaaatggatatcatataaa 178  Q
    ||||| |||||||||||||||||| |||||| || ||||||||| || ||||||    
T  9033152 ttattagatgaaattcatgtgagtgtcacacgttgaaaatggatctcgtataaa 9033205  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 24072576 - 24072625
Alignment:
Q  326 atcgataatttttgcatattagacccaacccaagagcccattaacacact 375  Q
    |||||||||||||||| |||||| | ||||||| | ||||||||||||||    
T  24072576 atcgataatttttgcacattagatcgaacccaaaaacccattaacacact 24072625  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 24695515 - 24695572
Alignment:
Q  326 atcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaa 383  Q
    |||||| ||||||  | ||||| | |||||||| ||||||||||||||||||||||||    
T  24695515 atcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaaaa 24695572  T

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Target: scaffold0502 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 5250 - 5356
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    ||||||||||| |||||||||||| ||||||||||| | || |||| |||||||||||||||||||||||| ||||||     |||||||||||||| ||    
T  5250 cgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacatgc 5349  T
Q  413 aaatagg 419  Q
    |||||||    
T  5350 aaatagg 5356  T

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Target: scaffold2142 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 542 - 648
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  542 cgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaattgtcacacgt 641  T
Q  413 aaatagg 419  Q
    |||||||    
T  642 aaatagg 648  T

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Target: scaffold0041 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 52945 - 53051
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttgg-----gtgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||   ||||||| |||| ||||||||| ||||||||||||||||||||      |||||||||||||| ||    
T  52945 cgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgc 53044  T
Q  413 aaatagg 419  Q
    |||||||    
T  53045 aaatagg 53051  T

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Target: scaffold0002 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 480604 - 480498
Alignment:
Q  318 cgggctcgatcgataatttttgcatattagacccaacccaagagcccattaacacacttacaaaaagaaaaatttggg-----tgaaaattctcacacgc 412  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||| |||||||||| ||| |||||||||||||||||     |||||||| |||||||     
T  480604 cgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaattgtcacacgt 480505  T
Q  413 aaatagg 419  Q
    |||||||    
T  480504 aaatagg 480498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 430 - 464
Target Start/End: Complemental strand, 435400 - 435366
Alignment:
Q  430 acatttacctcataattttatttagcacactattg 464  Q
    ||||||||||| |||||||||||||||||||||||    
T  435400 acatttacctcctaattttatttagcacactattg 435366  T

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Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 62550 - 62493
Alignment:
Q  124 tttattggatgaaattcatgtgagtatcacactttaaaaatggatatcatataaaatg 181  Q
    |||||| ||||||||| |||||| |||||||||||||||||| || ||| ||||||||    
T  62550 tttattagatgaaatttatgtgaatatcacactttaaaaatgaatctcacataaaatg 62493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 69882 - 69825
Alignment:
Q  124 tttattggatgaaattcatgtgagtatcacactttaaaaatggatatcatataaaatg 181  Q
    |||||| ||||||||| |||||| |||||||||||||||||| || ||| ||||||||    
T  69882 tttattagatgaaatttatgtgaatatcacactttaaaaatgaatctcacataaaatg 69825  T

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Target: scaffold0178 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 466
Target Start/End: Original strand, 17863 - 17899
Alignment:
Q  430 acatttacctcataattttatttagcacactattgac 466  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  17863 acatttaactcctaattttatttagcacactattgac 17899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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