View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1484-Insertion-3 (Length: 506)

Name: NF1484-Insertion-3
Description: NF1484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1484-Insertion-3
NF1484-Insertion-3
[»] chr7 (38 HSPs)
chr7 (7-506)||(23020121-23020614)
chr7 (294-497)||(27237342-27237545)
chr7 (294-506)||(2611179-2611394)
chr7 (373-497)||(7398431-7398555)
chr7 (294-497)||(12419413-12419617)
chr7 (294-497)||(23859053-23859257)
chr7 (373-495)||(36891560-36891682)
chr7 (297-481)||(12981322-12981505)
chr7 (294-497)||(21763507-21763709)
chr7 (294-465)||(23744808-23744980)
chr7 (297-475)||(38971255-38971433)
chr7 (374-497)||(9021799-9021921)
chr7 (397-472)||(20153206-20153281)
chr7 (373-475)||(29077222-29077324)
chr7 (373-475)||(48983842-48983944)
chr7 (301-496)||(6765609-6765802)
chr7 (373-475)||(8171537-8171639)
chr7 (373-475)||(10955486-10955588)
chr7 (373-475)||(20091279-20091381)
chr7 (291-500)||(18201114-18201322)
chr7 (373-471)||(18776764-18776862)
chr7 (397-475)||(23551093-23551171)
chr7 (375-473)||(36902924-36903022)
chr7 (397-475)||(38414898-38414976)
chr7 (382-475)||(12596294-12596387)
chr7 (378-475)||(24525688-24525785)
chr7 (441-497)||(9014828-9014884)
chr7 (373-475)||(19692096-19692198)
chr7 (373-453)||(26254017-26254097)
chr7 (380-471)||(10329415-10329506)
chr7 (373-472)||(28749715-28749813)
chr7 (325-359)||(26917681-26917715)
chr7 (397-475)||(47984992-47985070)
chr7 (329-430)||(9014133-9014233)
chr7 (374-453)||(33162338-33162417)
chr7 (381-475)||(8239689-8239783)
chr7 (423-481)||(17800269-17800327)
chr7 (435-475)||(25010435-25010475)
[»] chr4 (49 HSPs)
chr4 (301-497)||(39329317-39329514)
chr4 (292-506)||(27112005-27112220)
chr4 (320-496)||(52468272-52468447)
chr4 (292-484)||(10041915-10042109)
chr4 (294-471)||(36118377-36118554)
chr4 (373-481)||(24396935-24397043)
chr4 (397-484)||(4167913-4168000)
chr4 (373-475)||(54780784-54780886)
chr4 (376-497)||(36178658-36178778)
chr4 (293-364)||(5893130-5893202)
chr4 (320-475)||(47128994-47129149)
chr4 (373-475)||(2790739-2790841)
chr4 (373-475)||(10978907-10979009)
chr4 (373-475)||(43455529-43455631)
chr4 (374-475)||(38209590-38209691)
chr4 (373-468)||(32128598-32128693)
chr4 (380-475)||(34027586-34027681)
chr4 (397-475)||(35779347-35779425)
chr4 (381-475)||(37777229-37777323)
chr4 (292-359)||(24614077-24614145)
chr4 (382-470)||(37514671-37514759)
chr4 (397-481)||(37744932-37745016)
chr4 (378-481)||(2135324-2135427)
chr4 (373-475)||(16845028-16845131)
chr4 (294-497)||(51691838-51692039)
chr4 (373-475)||(32915392-32915494)
chr4 (373-475)||(34768572-34768674)
chr4 (378-499)||(45656158-45656279)
chr4 (292-497)||(40217217-40217421)
chr4 (294-414)||(30507037-30507161)
chr4 (295-455)||(39655172-39655334)
chr4 (397-475)||(40089523-40089601)
chr4 (373-471)||(48209251-48209349)
chr4 (373-475)||(54083240-54083342)
chr4 (296-364)||(11906822-11906891)
chr4 (297-360)||(4167843-4167907)
chr4 (383-475)||(13460214-13460306)
chr4 (376-499)||(15735078-15735196)
chr4 (397-475)||(5128864-5128942)
chr4 (382-471)||(1105543-1105632)
chr4 (373-474)||(35465115-35465215)
chr4 (373-481)||(36362869-36362976)
chr4 (380-451)||(10428202-10428273)
chr4 (373-464)||(16882393-16882484)
chr4 (373-420)||(55255319-55255366)
chr4 (373-450)||(17679432-17679509)
chr4 (373-453)||(51964737-51964820)
chr4 (374-414)||(24614021-24614061)
chr4 (435-475)||(24969444-24969484)
[»] chr1 (36 HSPs)
chr1 (297-497)||(45758485-45758688)
chr1 (294-497)||(38546954-38547158)
chr1 (294-497)||(39134638-39134845)
chr1 (292-500)||(26803936-26804139)
chr1 (293-497)||(5533303-5533508)
chr1 (294-475)||(17168969-17169151)
chr1 (327-497)||(43235720-43235892)
chr1 (380-475)||(27559650-27559745)
chr1 (373-475)||(5316693-5316795)
chr1 (373-475)||(23185440-23185542)
chr1 (373-495)||(38853516-38853637)
chr1 (373-475)||(44655754-44655856)
chr1 (382-474)||(16140069-16140161)
chr1 (373-475)||(50146309-50146411)
chr1 (378-475)||(9173026-9173123)
chr1 (378-475)||(9181008-9181105)
chr1 (298-496)||(6221670-6221867)
chr1 (373-475)||(3406431-3406533)
chr1 (373-475)||(3440287-3440389)
chr1 (373-475)||(5027562-5027664)
chr1 (373-475)||(14146313-14146415)
chr1 (373-475)||(50881443-50881545)
chr1 (374-475)||(4971617-4971718)
chr1 (382-475)||(6771804-6771897)
chr1 (292-484)||(10925870-10926063)
chr1 (375-475)||(1366878-1366978)
chr1 (373-497)||(33170750-33170874)
chr1 (373-467)||(21740935-21741029)
chr1 (397-475)||(40501812-40501890)
chr1 (380-475)||(19955730-19955825)
chr1 (373-465)||(6889634-6889726)
chr1 (373-465)||(6891480-6891572)
chr1 (397-476)||(51607461-51607541)
chr1 (373-420)||(27906727-27906774)
chr1 (373-475)||(41697135-41697237)
chr1 (373-453)||(22865459-22865538)
[»] chr8 (35 HSPs)
chr8 (295-497)||(7944442-7944645)
chr8 (300-481)||(15078754-15078936)
chr8 (300-497)||(15167338-15167538)
chr8 (302-456)||(30674330-30674485)
chr8 (325-481)||(5973058-5973214)
chr8 (373-481)||(11290180-11290288)
chr8 (320-471)||(34789808-34789959)
chr8 (294-481)||(8646202-8646389)
chr8 (294-496)||(39332327-39332527)
chr8 (373-506)||(41677172-41677306)
chr8 (300-473)||(34048633-34048806)
chr8 (397-497)||(5942676-5942776)
chr8 (373-475)||(45475819-45475921)
chr8 (380-475)||(42600784-42600879)
chr8 (373-475)||(23606628-23606730)
chr8 (373-475)||(30883331-30883433)
chr8 (374-475)||(23798261-23798362)
chr8 (294-413)||(38009070-38009191)
chr8 (397-481)||(8102908-8102992)
chr8 (397-500)||(5721536-5721639)
chr8 (403-494)||(25561523-25561613)
chr8 (373-475)||(2952220-2952322)
chr8 (373-475)||(10917393-10917495)
chr8 (373-475)||(13534686-13534787)
chr8 (373-475)||(13624226-13624327)
chr8 (373-471)||(41879187-41879285)
chr8 (374-471)||(5860744-5860841)
chr8 (300-364)||(5942780-5942845)
chr8 (300-481)||(14509905-14510089)
chr8 (378-497)||(23941095-23941214)
chr8 (373-475)||(37430157-37430259)
chr8 (297-352)||(38843417-38843473)
chr8 (397-475)||(3048540-3048618)
chr8 (374-419)||(9108551-9108596)
chr8 (292-364)||(34812674-34812747)
[»] scaffold0007 (1 HSPs)
scaffold0007 (294-498)||(230780-230983)
[»] chr5 (42 HSPs)
chr5 (294-473)||(26718865-26719045)
chr5 (294-473)||(26988609-26988789)
chr5 (292-497)||(11242233-11242438)
chr5 (305-497)||(34425883-34426076)
chr5 (321-497)||(1366470-1366646)
chr5 (320-500)||(10543651-10543829)
chr5 (374-506)||(14318382-14318514)
chr5 (295-495)||(2530815-2531015)
chr5 (336-497)||(2024600-2024762)
chr5 (294-474)||(10407464-10407645)
chr5 (373-497)||(36868872-36868996)
chr5 (298-477)||(24395739-24395918)
chr5 (380-475)||(16198797-16198892)
chr5 (325-497)||(2412068-2412236)
chr5 (373-475)||(30854331-30854433)
chr5 (373-475)||(34756362-34756464)
chr5 (373-471)||(38869359-38869457)
chr5 (373-481)||(33037776-33037884)
chr5 (380-475)||(9364293-9364388)
chr5 (373-475)||(27079013-27079115)
chr5 (294-363)||(27530608-27530678)
chr5 (373-475)||(28822338-28822440)
chr5 (294-413)||(35080688-35080806)
chr5 (373-475)||(16592070-16592172)
chr5 (373-475)||(23284058-23284160)
chr5 (320-481)||(40794269-40794431)
chr5 (374-496)||(41911614-41911736)
chr5 (382-475)||(15480094-15480187)
chr5 (383-475)||(19523201-19523293)
chr5 (375-499)||(22648734-22648858)
chr5 (374-453)||(7338023-7338102)
chr5 (373-472)||(31194608-31194706)
chr5 (380-475)||(40389539-40389634)
chr5 (373-475)||(2274892-2274994)
chr5 (397-475)||(15639645-15639723)
chr5 (381-475)||(16799331-16799425)
chr5 (373-471)||(22986554-22986652)
chr5 (373-471)||(36187875-36187973)
chr5 (397-475)||(27924084-27924162)
chr5 (373-421)||(606210-606258)
chr5 (397-472)||(7670929-7671004)
chr5 (295-356)||(22875060-22875122)
[»] chr2 (36 HSPs)
chr2 (301-497)||(21665627-21665823)
chr2 (300-481)||(16097003-16097185)
chr2 (325-497)||(13800495-13800668)
chr2 (320-481)||(38400793-38400954)
chr2 (302-497)||(24035472-24035668)
chr2 (293-497)||(12133954-12134163)
chr2 (299-500)||(28425631-28425836)
chr2 (374-498)||(16227368-16227492)
chr2 (373-475)||(12337447-12337549)
chr2 (373-475)||(29939861-29939963)
chr2 (407-497)||(37182649-37182739)
chr2 (374-475)||(10762565-10762666)
chr2 (378-475)||(24410438-24410535)
chr2 (373-475)||(9046030-9046133)
chr2 (373-475)||(3155218-3155320)
chr2 (373-475)||(4505895-4505997)
chr2 (373-475)||(6965008-6965110)
chr2 (297-360)||(11952511-11952575)
chr2 (301-495)||(7742055-7742255)
chr2 (418-497)||(11952650-11952729)
chr2 (300-455)||(42029166-42029326)
chr2 (373-475)||(7162785-7162887)
chr2 (380-476)||(27506746-27506842)
chr2 (374-497)||(11912757-11912880)
chr2 (373-475)||(26716129-26716232)
chr2 (325-364)||(44914855-44914894)
chr2 (294-414)||(22727376-22727497)
chr2 (320-453)||(34693998-34694131)
chr2 (320-453)||(34716410-34716543)
chr2 (373-450)||(40636164-40636241)
chr2 (381-471)||(8907086-8907176)
chr2 (382-475)||(3953007-3953100)
chr2 (301-361)||(12694794-12694855)
chr2 (300-360)||(37182760-37182821)
chr2 (294-360)||(16227285-16227351)
chr2 (402-470)||(22727530-22727598)
[»] scaffold1590 (1 HSPs)
scaffold1590 (290-497)||(173-381)
[»] chr6 (22 HSPs)
chr6 (292-506)||(2477502-2477717)
chr6 (382-475)||(24711007-24711100)
chr6 (377-496)||(6159422-6159541)
chr6 (380-475)||(28075788-28075883)
chr6 (373-475)||(13727398-13727500)
chr6 (373-475)||(20711719-20711821)
chr6 (373-475)||(21479499-21479601)
chr6 (294-497)||(20611773-20611975)
chr6 (397-497)||(21183698-21183798)
chr6 (373-476)||(21280549-21280652)
chr6 (373-475)||(27788687-27788789)
chr6 (381-475)||(33774122-33774216)
chr6 (397-497)||(4036931-4037031)
chr6 (374-472)||(1155849-1155947)
chr6 (373-475)||(19737691-19737793)
chr6 (380-475)||(17353959-17354054)
chr6 (374-457)||(30121785-30121868)
chr6 (373-475)||(34397862-34397964)
chr6 (435-474)||(27994775-27994814)
chr6 (293-361)||(21183615-21183684)
chr6 (373-453)||(27314177-27314258)
chr6 (382-475)||(30832532-30832625)
[»] scaffold1320 (1 HSPs)
scaffold1320 (300-481)||(1350-1532)
[»] scaffold0012 (2 HSPs)
scaffold0012 (301-481)||(206417-206596)
scaffold0012 (294-356)||(182436-182499)
[»] scaffold0097 (1 HSPs)
scaffold0097 (300-481)||(38921-39106)
[»] chr3 (36 HSPs)
chr3 (301-497)||(25855405-25855601)
chr3 (294-497)||(49393074-49393275)
chr3 (327-497)||(26279523-26279694)
chr3 (299-453)||(32319081-32319234)
chr3 (292-497)||(54574740-54574950)
chr3 (373-481)||(8420325-8420433)
chr3 (330-506)||(28689317-28689493)
chr3 (320-475)||(8073284-8073439)
chr3 (373-476)||(37168371-37168474)
chr3 (373-475)||(21582776-21582878)
chr3 (373-475)||(54619202-54619304)
chr3 (382-475)||(47467689-47467782)
chr3 (373-475)||(3953895-3953997)
chr3 (373-475)||(34290635-34290737)
chr3 (373-475)||(42098806-42098908)
chr3 (373-475)||(43207237-43207338)
chr3 (298-431)||(23641240-23641375)
chr3 (381-475)||(44708482-44708576)
chr3 (373-475)||(53149313-53149415)
chr3 (373-471)||(53506883-53506981)
chr3 (373-474)||(38681092-38681193)
chr3 (373-474)||(18372485-18372590)
chr3 (423-499)||(29598088-29598163)
chr3 (373-449)||(42453435-42453511)
chr3 (327-506)||(52374631-52374810)
chr3 (374-481)||(789935-790042)
chr3 (380-475)||(50939239-50939334)
chr3 (373-468)||(54407157-54407252)
chr3 (373-475)||(9878686-9878788)
chr3 (294-361)||(36179476-36179544)
chr3 (380-471)||(27078575-27078666)
chr3 (380-471)||(27084372-27084463)
chr3 (373-452)||(36716024-36716103)
chr3 (380-472)||(36605973-36606065)
chr3 (440-497)||(52973379-52973436)
chr3 (294-357)||(52973437-52973501)
[»] scaffold0018 (1 HSPs)
scaffold0018 (379-504)||(173515-173641)
[»] scaffold0039 (1 HSPs)
scaffold0039 (373-475)||(106540-106642)
[»] scaffold0182 (2 HSPs)
scaffold0182 (374-499)||(23993-24118)
scaffold0182 (294-342)||(23919-23968)
[»] scaffold0022 (2 HSPs)
scaffold0022 (309-497)||(40065-40257)
scaffold0022 (309-497)||(138125-138317)
[»] scaffold0070 (1 HSPs)
scaffold0070 (373-475)||(1345-1447)
[»] scaffold0003 (2 HSPs)
scaffold0003 (400-454)||(351360-351414)
scaffold0003 (295-363)||(351255-351324)
[»] scaffold0902 (1 HSPs)
scaffold0902 (320-393)||(4409-4482)


Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 7 - 506
Target Start/End: Original strand, 23020121 - 23020614
Alignment:
Q  7 agctagcacaaacatattctaactagggttgacttgaagttttagtatttggggtaaaatgtgagtgaattatatagtttagctaggggcctctattttg 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23020121 agctagcacaaacatattctaactagggttgacttgaagttttagtatttggggtaaaatgtgagtgaattatatagtttagctaggggcctctattttg 23020220  T
Q  107 agatggttacttgcttctcaagtctcgcccatgatcgatggaaacttggtctttaagccacgttcgttgttctaaagcttggttcatggagctcatctct 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | ||||||||||||||||||||||||||||||||||||    
T  23020221 agatggttacttgcttctcaagtctcgcccatgatcgatggaaacttggtctttaagc----tacgttgttctaaagcttggttcatggagctcatctct 23020316  T
Q  207 ttcctattggatccttatgataatggatgcgcgggcaaaaataactatccaatcaacatcagtaatgctaaacttccagacaaacagcagggccgttcct 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23020317 ttcctattggatccttatgataatggatgcgcgggcaaaaataactatccaatcaacatcagtaatgctaaacttccagacaaacag-agggccgttcct 23020415  T
Q  307 acgaatctggaggtcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaag 406  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||| |||||||| ||||||||||    
T  23020416 acgaatctggaggccggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaacgtttcatttagattttttaaaag 23020515  T
Q  407 ataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaacacctacct 506  Q
    |||||||  ||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23020516 ataaatataaggtgttgtatatatg-cacacactcaaaggtgaaaatcactaccgtatacatgaggaacttcaaatcatcctctcaaaaaacacctacct 23020614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 294 - 497
Target Start/End: Original strand, 27237342 - 27237545
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    |||||||||||||  |||| |||||| |||  ||| ||||||||||||| ||||||||||||||| || |||        ||||||||||||||| ||||    
T  27237342 cagggccgttcctgtgaatttggaggctcgtctctataagtgaaaagagatccgtaataaaataacaa-gtattttttttaaaagaacaatgttctattt 27237440  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctccca 492  Q
    | | |||||||||||||||||| ||||||||||||||||||||  |   ||||||||||||||||  |||||||||||||||| ||||| || |||||||    
T  27237441 aaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgaggaacctcaaaccaccctccca 27237540  T
Q  493 aaaaa 497  Q
    |||||    
T  27237541 aaaaa 27237545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 294 - 506
Target Start/End: Original strand, 2611179 - 2611394
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttccatt 391  Q
    ||||| |||||||| ||||| ||||| ||||||||| |||||||||||||   ||||||||||||||| |||         ||||||||||||||| |||    
T  2611179 cagggtcgttcctatgaatccggaggctcggttctgcaagtgaaaagaggcttgtaataaaataaaaaagtatttttttttaaaagaacaatgttctatt 2611278  T
Q  392 tagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctccc 491  Q
    || | |||||||||||||||||| |||||| ||||||||| | ||||| ||| ||||||||||||  | ||||||||||||||| |||||  ||||||||    
T  2611279 taaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgaggaacctcaaacgatcctccc 2611378  T
Q  492 a-aaaaacacctacct 506  Q
    | ||||||||| ||||    
T  2611379 agaaaaacacccacct 2611394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 373 - 497
Target Start/End: Complemental strand, 7398555 - 7398431
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||||||| ||||| | ||||| |||||||||||| |||||   ||||||||||||||||  |||||||||||||||| || |||||||||||    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  473 aacttcaaatcatcctcccaaaaaa 497  Q
    ||| ||||| || ||||||||||||    
T  7398455 aacctcaaaccaccctcccaaaaaa 7398431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 497
Target Start/End: Original strand, 12419413 - 12419617
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    |||||||||||||| ||||| ||||| |||| | |||||||||||||||| |||||||||||||| || |||        ||||||||||||||| ||||    
T  12419413 cagggccgttcctatgaatccggaggctcggctttgtaagtgaaaagaggcccgtaataaaataacaacgtattttttttaaaagaacaatgttctattt 12419512  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctccca 492  Q
    | | |||||||||||||||||| | ||    ||||| |||||||||  ||||| |||||||||||   | ||||||||||||| ||||| || |||||||    
T  12419513 aaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgaggaacctcaaaccaccctccca 12419612  T
Q  493 aaaaa 497  Q
    |||||    
T  12419613 aaaaa 12419617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 497
Target Start/End: Complemental strand, 23859257 - 23859053
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    |||| |||||||||||||| |||||| |||  |||||||||||||||||  | ||||||||||||||| |||        || |||| ||||||| ||||    
T  23859257 caggtccgttcctacgaatttggaggctcgactctgtaagtgaaaagagacctgtaataaaataaaaacgtattttgtttaagagaataatgttctattt 23859158  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctccca 492  Q
    | | |||||||||||||||||| | ||   ||||||||| ||||||| ||||| ||||||| ||| ||||||||||||||| | ||||| || |||||||    
T  23859157 aaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatcctcaaaccaccctccca 23859058  T
Q  493 aaaaa 497  Q
    |||||    
T  23859057 aaaaa 23859053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 373 - 495
Target Start/End: Complemental strand, 36891682 - 36891560
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||| ||||||| ||||| | |||||||| ||| ||||| | |||||||||||||  | ||||  ||||||||||||||||| ||||||||||||||    
T  36891682 aaaagaataatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgagg 36891583  T
Q  473 aacttcaaatcatcctcccaaaa 495  Q
    ||| ||||| |||||||||||||    
T  36891582 aacctcaaaccatcctcccaaaa 36891560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 481
Target Start/End: Complemental strand, 12981505 - 12981322
Alignment:
Q  297 ggccgttcctacgaatctggaggt-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttaga 395  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||||  |||||||||||||||||||         ||||||| ||||||| |||||      
T  12981505 ggccgttcctacgaatccggaggttcggttctgtaggtgaaaagaggctcgtaataaaataaaaatgt--tttttataaaagaagaatgttctatttaat 12981408  T
Q  396 ctttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
     |||||||||||||||||| ||||    |||||| | | ||||| ||||||||||||||||| | ||||| ||||||||| |||||    
T  12981407 ttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacctcaaa 12981322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 497
Target Start/End: Original strand, 21763507 - 21763709
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    ||||||||||||||| |||||||||| || ||||| ||||| ||||||| |||||||||||||||||| |||         |||||||| ||||| ||||    
T  21763507 cagggccgttcctacaaatctggaggctctgttctataagtaaaaagagatccgtaataaaataaaaacgtattttttt--aaagaacattgttctattt 21763604  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctccca 492  Q
    | | |||||||||||||||||| | || | ||||||||| |||||||  ||| |||||||||||| ||  || ||| | |||  |||||||| |||||||    
T  21763605 aaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactaccagatgcatcaagaatctcaaatcaccctccca 21763704  T
Q  493 aaaaa 497  Q
    |||||    
T  21763705 aaaaa 21763709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 465
Target Start/End: Complemental strand, 23744980 - 23744808
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    ||||||||||||||||||| |||||| || | ||| |||||||||||||| |||||| ||||||||||||||        ||||||||||||||| | ||    
T  23744980 cagggccgttcctacgaatttggaggctcagctctataagtgaaaagaggcccgtaaaaaaataaaaatgtatttttttaaaaagaacaatgttctaatt 23744881  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtata 465  Q
    | | |||||||||||||||||| |||||  | ||||||| | |||||  |||| | ||||||||| |||||||    
T  23744880 aaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 475
Target Start/End: Complemental strand, 38971433 - 38971255
Alignment:
Q  297 ggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttaga 395  Q
    ||||||| |||||||||| |||  |||| | |||||||||||||||  |||||||||||||||||||||        |||||| |||| ||  ||||| |    
T  38971433 ggccgtttctacgaatctagagactcggctttgtaagtgaaaagagacccgtaataaaataaaaatgtattttttttaaaagatcaatattttatttaaa 38971334  T
Q  396 ctttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
     |||||||||||||||||| |||||| |||||||||| ||||||  ||| |||||||||||| ||||| ||| |||||||    
T  38971333 -tttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 374 - 497
Target Start/End: Original strand, 9021799 - 9021921
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    |||||||||| | | ||||| | |||||||||||||||||| | |||  ||||||||| | ||||| ||||||||||||||||| ||||||||||||||     
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagg- 9021897  T
Q  474 acttcaaatcatcctcccaaaaaa 497  Q
    || ||||| || ||||||||||||    
T  9021898 acctcaaaccaccctcccaaaaaa 9021921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 20153281 - 20153206
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||||||||||||||| | |||||||||||||| |||| || ||||| ||||||||||||||||||||||||||    
T  20153281 tttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagg 20153206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 29077324 - 29077222
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||| ||||||||| | |||||  | |||||||||| ||| ||||||||||||||    
T  29077324 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgagg 29077225  T
Q  473 aac 475  Q
    |||    
T  29077224 aac 29077222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 48983842 - 48983944
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||| ||||||| || ||||| | |||||||||||||||||  |||||| ||||||||| | ||||| ||||||||||||| ||| ||||||||||||||    
T  48983842 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgagg 48983941  T
Q  473 aac 475  Q
    |||    
T  48983942 aac 48983944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 301 - 496
Target Start/End: Original strand, 6765609 - 6765802
Alignment:
Q  301 gttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagacttt 399  Q
    ||||||||||||| ||||| || ||||||||  ||||||||||  |||||||||||||||| ||          |||||||||||||| ||||| | |||    
T  6765609 gttcctacgaatccggaggctcagttctgtagatgaaaagaggctcgtaataaaataaaaaagtttttttt---aaagaacaatgttctatttaaatttt 6765705  T
Q  400 ttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaa 496  Q
    ||||||||||||||| |||||| ||||||| |   ||||  ||||||||||||||||| ||||||| | ||| ||| ||||| || ||| |||||||    
T  6765706 ttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagtaacctcaaaccacccttccaaaaa 6765802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 8171537 - 8171639
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || || ||||||| ||| ||||||||||||||    
T  8171537 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagg 8171636  T
Q  473 aac 475  Q
    |||    
T  8171637 aac 8171639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 10955588 - 10955486
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||  |||||  ||||||||| | |||||||| |||||||||| ||| ||||||||||||||    
T  10955588 aaaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgagg 10955489  T
Q  473 aac 475  Q
    |||    
T  10955488 aac 10955486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 20091279 - 20091381
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||| ||||||| || ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| ||||||||||||||    
T  20091279 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 20091378  T
Q  473 aac 475  Q
    |||    
T  20091379 aac 20091381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 500
Target Start/End: Complemental strand, 18201322 - 18201114
Alignment:
Q  291 cagcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttcca 389  Q
    ||||||||||||||| ||||||| ||||| |||| |||| |||||||| || |||||||||||||||||||| ||        ||| |||||||| || |    
T  18201322 cagcagggccgttcccacgaatccggaggctcggctctgcaagtgaaa-gatgtccgtaataaaataaaaatata-tttttttaaacgaacaatgatcta 18201225  T
Q  390 tttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctc 489  Q
    |||| | ||||||||| |||||||| || ||   |||||||||| |||||  || ||||||||||  | || || ||||||||||| ||||| || ||||    
T  18201224 tttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacctcaaaccaccctc 18201125  T
Q  490 ccaaaaaacac 500  Q
    | |||||||||    
T  18201124 ctaaaaaacac 18201114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 18776764 - 18776862
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || | |||||||| ||| |||||||||||||    
T  18776764 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgag 18776862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 23551093 - 23551171
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||||||||||  |||||| ||||||||| | ||||  ||||||||||||| ||| |||||||||||||||||    
T  23551093 tttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaac 23551171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 473
Target Start/End: Original strand, 36902924 - 36903022
Alignment:
Q  375 aagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    ||||||||||||| ||||| | ||||||| |||||||||| || ||| ||||||||||  |||||  |||||||||||||| | | |||||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 38414898 - 38414976
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||||||||||  |||||  ||||||||||| ||||| ||||||||||||| ||| | |||||||||||||||    
T  38414898 tttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaac 38414976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 12596294 - 12596387
Alignment:
Q  382 atgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||| ||||| | ||||| |||||||||||| |||||  ||||||||||| ||||| || |||||||||| ||| |||||| ||||||||||    
T  12596294 atgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaac 12596387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 475
Target Start/End: Original strand, 24525688 - 24525785
Alignment:
Q  378 aacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||| ||||| | |||||||||||||||||  |||||  || |||||| | ||||| |||| |||||||| ||| |||||||||||||||||    
T  24525688 aacaatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaac 24525785  T

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Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 497
Target Start/End: Original strand, 9014828 - 9014884
Alignment:
Q  441 caaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||    
T  9014828 caaaggtgaaaatcactaccgtatacatgagtaacctcaaatcaccctcccaaaaaa 9014884  T

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Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 19692198 - 19692096
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||  |||||   |||||||| | |||||  |||||||||||| |||  |||||||||||||    
T  19692198 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgagg 19692099  T
Q  473 aac 475  Q
    |||    
T  19692098 aac 19692096  T

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Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 453
Target Start/End: Complemental strand, 26254097 - 26254017
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaat 453  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| ||||| |||||||    
T  26254097 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

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Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 471
Target Start/End: Original strand, 10329415 - 10329506
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| |  | || ||||||||||||| ||| |||||||||||||    
T  10329415 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgag 10329506  T

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Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 472
Target Start/End: Complemental strand, 28749813 - 28749715
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||| ||| ||||| | |||| ||||||||||||| |||||  ||||||||| | |||||||| | |||||||| ||| ||||||||||||||    
T  28749813 aaaagagcaatattctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

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Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 26917681 - 26917715
Alignment:
Q  325 tctgtaagtgaaaagaggtccgtaataaaataaaa 359  Q
    |||||||||||||||||||||||||||||||||||    
T  26917681 tctgtaagtgaaaagaggtccgtaataaaataaaa 26917715  T

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Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 47984992 - 47985070
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||||||||| |||||  |||||  ||||||||| | ||||| ||||||||||||| ||  |||||||||||||||||    
T  47984992 tttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaac 47985070  T

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Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 430
Target Start/End: Original strand, 9014133 - 9014233
Alignment:
Q  329 taagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatat 428  Q
    |||||||||||||| ||||||||||||||||  |||        ||| ||||||||||  ||||| | |||||||||||||||||| | |||||||||||    
T  9014133 taagtgaaaagaggcccgtaataaaataaaaccgtattttttttaaa-gaacaatgttttatttaaattttttaaaagataaatacaatgtgttgtatat 9014231  T
Q  429 at 430  Q
    ||    
T  9014232 at 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 453
Target Start/End: Original strand, 33162338 - 33162417
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaat 453  Q
    ||||| ||||| || ||||| | |||||||||||||||||| |||||  ||||||||| | |||||  ||||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaat 33162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 475
Target Start/End: Complemental strand, 8239783 - 8239689
Alignment:
Q  381 aatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||||| ||||| | ||||||||| |||||||  | |||  ||||||||||| ||||| |||| |||||||| | | ||||||| |||||||||    
T  8239783 aatgttctatttatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaac 8239689  T

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Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 481
Target Start/End: Original strand, 17800269 - 17800327
Alignment:
Q  423 gtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
    ||||||||||  ||||| |||| |||||||||||| |||||| ||||||||| ||||||    
T  17800269 gtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaatttcaaa 17800327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 475
Target Start/End: Complemental strand, 25010475 - 25010435
Alignment:
Q  435 tacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||| ||||||||||||| ||| |||||||||||||||||    
T  25010475 tacacccaaaggtgaaaatgactaccgtatacatgaggaac 25010435  T

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Target: chr4 (Bit Score: 98; Significance: 5e-48; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 301 - 497
Target Start/End: Original strand, 39329317 - 39329514
Alignment:
Q  301 gttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagacttt 399  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  ||        |||||||||||||||  |||| | |||    
T  39329317 gttcctacgaatttggaggctcggttctgtaagtgaaaagaggtccgtaataaaataaaaacatattttttttaaaagaacaatgttctctttaaatttt 39329416  T
Q  400 ttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||  | ||||||||| ||||||| ||||| || ||||||||||||    
T  39329417 ttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaacatcaaaccaccctcccaaaaaa 39329514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 292 - 506
Target Start/End: Complemental strand, 27112220 - 27112005
Alignment:
Q  292 agcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccat 390  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| | ||||        ||| ||||||||||| ||    
T  27112220 agcagcgccgttcctacaaatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtattttttt-aaacgaacaatgttcaat 27112122  T
Q  391 ttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcc 490  Q
    ||| | |||||||||||||||||| |||||   |||||||| |||||||  ||| |||||||||||| ||||||||||||||||| ||||| || |||||    
T  27112121 ttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcc 27112022  T
Q  491 ca-aaaaacacctacct 506  Q
    || ||||||||| ||||    
T  27112021 cagaaaaacacccacct 27112005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 320 - 496
Target Start/End: Complemental strand, 52468447 - 52468272
Alignment:
Q  320 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggt 419  Q
    |||| |||||| ||||||||||||| ||||||||||||||| |||        ||||||||||||||| ||||| | |||||||||||||||||| ||||    
T  52468447 tcggctctgtaggtgaaaagaggtctgtaataaaataaaaacgtattttttt-aaaagaacaatgttctatttaaattttttaaaagataaatacaaggt 52468349  T
Q  420 gttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaa 496  Q
    |  |||||||||| |||||  ||||||||||||||||| |||||| |||||||||| ||||| || | |||||||||    
T  52468348 gccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctcaaaccaccttcccaaaaa 52468272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 292 - 484
Target Start/End: Original strand, 10041915 - 10042109
Alignment:
Q  292 agcagggccgttcctacgaatctggaggt-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttcca 389  Q
    ||||| |||||||||||||||| |||||| | |||||||||||||||||||||||||| ||||||||||  |||         ||||||||||||||| |    
T  10041915 agcagagccgttcctacgaatcgggaggttcagttctgtaagtgaaaagaggtccgtagtaaaataaaagcgtatttttttttaaaagaacaatgttcta 10042014  T
Q  390 tttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatca 484  Q
    |||| | |||| |||| |||||||| |||||  |||| ||||||||||||  ||| |||||||||||| ||||||||| ||||||| ||||||||    
T  10042015 tttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggaggaacctcaaatca 10042109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 294 - 471
Target Start/End: Original strand, 36118377 - 36118554
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    |||||||||||||||||||  ||| | |||| | ||||||||||||||||  |||||||||||||||| |||        ||| ||||||||||| ||||    
T  36118377 cagggccgttcctacgaattcggaagctcggctttgtaagtgaaaagaggctcgtaataaaataaaaacgtattttttt-aaatgaacaatgttctattt 36118475  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    | | |||||||||||||||||| |||||| ||||||||||||||||| ||||  ||||||||||| |||||||||||||    
T  36118476 aaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgag 36118554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 373 - 481
Target Start/End: Complemental strand, 24397043 - 24396935
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||| ||  ||||| | |||||||||||||||||  |||||  |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  24397043 aaaagaacaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgagg 24396944  T
Q  473 aacttcaaa 481  Q
    ||| |||||    
T  24396943 aacctcaaa 24396935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 397 - 484
Target Start/End: Original strand, 4167913 - 4168000
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatca 484  Q
    |||||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||||||| || |||||||||||||| ||||||||    
T  4167913 tttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctcaaatca 4168000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 54780886 - 54780784
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| ||||||||||||| ||| ||||||||||||||    
T  54780886 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 54780787  T
Q  473 aac 475  Q
    |||    
T  54780786 aac 54780784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 376 - 497
Target Start/End: Complemental strand, 36178778 - 36178658
Alignment:
Q  376 agaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||||| ||||| | | |||||||||||||||| |||||| ||||||||| ||||||| |||| |||||||||||| || ||||||||| |||     
T  36178778 agaacaatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatgaagaa- 36178680  T
Q  476 ttcaaatcatcctcccaaaaaa 497  Q
    | |||| || ||||||||||||    
T  36178679 tccaaaccaccctcccaaaaaa 36178658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 5893202 - 5893130
Alignment:
Q  293 gcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgta 364  Q
    |||||||||||||||| ||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  5893202 gcagggccgttcctacaaatttggaggctcggctctgtaagtgaaaagaggtccgtaataaaataaaaatgta 5893130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 320 - 475
Target Start/End: Complemental strand, 47129149 - 47128994
Alignment:
Q  320 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggt 419  Q
    |||| |||| || |||||||||| | || ||||||| ||||||||        ||||||||||||||| ||||| | |||||||||||||||||| ||||    
T  47129149 tcggctctggaaatgaaaagaggccagtgataaaatcaaaatgtattttttttaaaagaacaatgttctatttatattttttaaaagataaatacaaggt 47129050  T
Q  420 gttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |  ||||||||| | ||||| || |||| ||||| ||| |||||||||||||||||    
T  47129049 gccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaac 47128994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 2790739 - 2790841
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||||||| ||||| | |||||||||||||||||  ||||   ||||||||| | ||||| ||||||||||||| ||| ||||||||||||||    
T  2790739 aaaagaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 2790838  T
Q  473 aac 475  Q
    |||    
T  2790839 aac 2790841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 10979009 - 10978907
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||| ||||||||| | ||||| || | |||||||| ||| ||||||||||||||    
T  10979009 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgagg 10978910  T
Q  473 aac 475  Q
    |||    
T  10978909 aac 10978907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 43455529 - 43455631
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| ||||||||||||||    
T  43455529 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 43455628  T
Q  473 aac 475  Q
    |||    
T  43455629 aac 43455631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 475
Target Start/End: Original strand, 38209590 - 38209691
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    ||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| |||||||||||||||    
T  38209590 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 38209689  T
Q  474 ac 475  Q
    ||    
T  38209690 ac 38209691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 468
Target Start/End: Complemental strand, 32128693 - 32128598
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacat 468  Q
    |||||| |||||||| ||||| | |||||||||||||||||  |||||| ||||||||| | ||||| ||||||||||||| ||| ||||||||||    
T  32128693 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 32128598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 34027681 - 34027586
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||| ||||| | |||||||||||||||||  |||||| ||||||||| | ||||| ||||||||||||| ||| | |||||||||||||||    
T  34027681 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaac 34027586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 35779347 - 35779425
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||||||||||| |||||| ||||||||| | ||||| ||||||||||||| | | |||||||||||||||||    
T  35779347 tttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaac 35779425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 475
Target Start/End: Original strand, 37777229 - 37777323
Alignment:
Q  381 aatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| |||||||||||||||||    
T  37777229 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 37777323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 359
Target Start/End: Complemental strand, 24614145 - 24614077
Alignment:
Q  292 agcagggccgttcctacgaatctggaggt-cggttctgtaagtgaaaagaggtccgtaataaaataaaa 359  Q
    ||||||||||||| ||||||||||||||| | | |||||||||||||||||| ||||||||||||||||    
T  24614145 agcagggccgttcttacgaatctggaggttcagctctgtaagtgaaaagaggcccgtaataaaataaaa 24614077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 470
Target Start/End: Complemental strand, 37514759 - 37514671
Alignment:
Q  382 atgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatga 470  Q
    |||||| ||||| | |||||||||||||||||| |||||  ||||||||| | |||||||| |||||||||| ||| ||||||||||||    
T  37514759 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 37744932 - 37745016
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
    |||||||||||||||||  |||||| | ||||||| ||||||  ||||||||||||||||| |||||||| |||||||| |||||    
T  37744932 tttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaaa 37745016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 2135324 - 2135427
Alignment:
Q  378 aacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaactt 477  Q
    |||||| ||| ||||| | |||||||||||||||||| |||||| ||||||||| ||||||  ||||||| || ||||||  |||||| ||||||||| |    
T  2135324 aacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacct 2135423  T
Q  478 caaa 481  Q
    ||||    
T  2135424 caaa 2135427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 16845131 - 16845028
Alignment:
Q  373 aaaagaacaatgttccatttagacttttt-aaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||| |||||||| ||||| | ||||| ||||||||||||  |||||| ||||||||||  ||||| ||| ||||||||| ||| |||||||||||||    
T  16845131 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgag 16845032  T
Q  472 gaac 475  Q
    ||||    
T  16845031 gaac 16845028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 497
Target Start/End: Original strand, 51691838 - 51692039
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    |||||||||||||||||||| ||||| |||| |||| |||||||||||||  ||||||||||     |||||        |||||| |||||||| ||||    
T  51691838 cagggccgttcctacgaatccggaggctcggctctgcaagtgaaaagaggctcgtaataaaa-----atgtattttttttaaaagagcaatgttctattt 51691932  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacac--tcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcc 490  Q
    | | |||||||||||||||||| |||||  ||||||||| | |||||    ||| |||||||||||| || |||||| || |||| ||||| || |||||    
T  51691933 aaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatatacacgatgaacctcaaaccaccctcc 51692032  T
Q  491 caaaaaa 497  Q
     ||||||    
T  51692033 gaaaaaa 51692039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 32915494 - 32915392
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||| |||||  ||||||||||| ||||| || |||| ||||| | | ||||||||||||||    
T  32915494 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgagg 32915395  T
Q  473 aac 475  Q
    |||    
T  32915394 aac 32915392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 34768572 - 34768674
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| || |||||||||| | | ||||||||||||||    
T  34768572 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgagg 34768671  T
Q  473 aac 475  Q
    |||    
T  34768672 aac 34768674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 499
Target Start/End: Complemental strand, 45656279 - 45656158
Alignment:
Q  378 aacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaactt 477  Q
    |||||||||  ||||| | |||||||||||||||| | ||||||  |||||||| |||| |  |||| |||||||||||   ||||||||||| |||| |    
T  45656279 aacaatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacct 45656180  T
Q  478 caaatcatcctcccaaaaaaca 499  Q
    |||| || ||||||||||||||    
T  45656179 caaaccaccctcccaaaaaaca 45656158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 497
Target Start/End: Complemental strand, 40217421 - 40217217
Alignment:
Q  292 agcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccat 390  Q
    ||||||||| |||||||||||   |||| |||||| ||||||||||||||||  |||||||||||||||| ||          |||||||| |  |  ||    
T  40217421 agcagggccattcctacgaattcagaggctcggttttgtaagtgaaaagaggctcgtaataaaataaaaacgtttttttttttaaagaacattact--at 40217324  T
Q  391 ttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcc 490  Q
    ||| | |||||||||||||||||  |||||| ||||||||| ||||||  ||||| ||||||||| |  | |||||||||| ||| ||||| || ||| |    
T  40217323 ttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaaccacccttc 40217224  T
Q  491 caaaaaa 497  Q
    |||||||    
T  40217223 caaaaaa 40217217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 414
Target Start/End: Original strand, 30507037 - 30507161
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgta---nnnnnnnnaaaagaacaatgttcca 389  Q
    ||||| |||||||||||||| ||||| ||| || |||||||||||||||  || ||||||||||||||||||           ||||||||||||||| |    
T  30507037 cagggtcgttcctacgaatccggaggctcgattttgtaagtgaaaagagacccataataaaataaaaatgtatttttttttttaaaagaacaatgttcta 30507136  T
Q  390 tttagactttttaaaagataaatac 414  Q
    |||| | ||||||||||||||||||    
T  30507137 tttaaattttttaaaagataaatac 30507161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 455
Target Start/End: Original strand, 39655172 - 39655334
Alignment:
Q  295 agggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaa-gaacaatgttccattt 392  Q
    |||| ||||||||| |||||||||| |||  |||||| |||||||||||  |||||||||||||||| ||         |||| ||||||||||| ||||    
T  39655172 agggtcgttcctacaaatctggaggctcgactctgtaggtgaaaagaggctcgtaataaaataaaaacgttctatttttaaaaagaacaatgttctattt 39655271  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatca 455  Q
    | | |||||||||||||||||| | ||   | ||||||| | ||||| |||||||||||||||    
T  39655272 aaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatca 39655334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 40089601 - 40089523
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||||||||||  |||||  ||||||||| | ||||  ||||||||||||| ||| |||||||||||||||||    
T  40089601 tttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaac 40089523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 48209349 - 48209251
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || | ||||| || ||| |||||||||||||    
T  48209349 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgag 48209251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 54083240 - 54083342
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||| ||||||| || ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||| | ||||| ||| ||||||||||||||    
T  54083240 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgagg 54083339  T
Q  473 aac 475  Q
    |||    
T  54083340 aac 54083342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 11906822 - 11906891
Alignment:
Q  296 gggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgta 364  Q
    |||||||||||||||||  ||||| |||| | | |||||||||||||| |||||||||||||||||||||    
T  11906822 gggccgttcctacgaattcggaggctcggctatataagtgaaaagaggcccgtaataaaataaaaatgta 11906891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 4167843 - 4167907
Alignment:
Q  297 ggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaa 360  Q
    |||||||| |||||||| ||||| ||| || |||||||||||||||| |||||||||||||||||    
T  4167843 ggccgttcgtacgaatccggaggctcgattttgtaagtgaaaagaggcccgtaataaaataaaaa 4167907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 475
Target Start/End: Complemental strand, 13460306 - 13460214
Alignment:
Q  383 tgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||| ||||| | |||||||||||||||||| |||||| ||||||||| | || || || | |||||||| ||| |||||||||| ||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaac 13460214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 499
Target Start/End: Complemental strand, 15735196 - 15735078
Alignment:
Q  376 agaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||| ||||| ||||| | |||||||||||||||||| ||  || ||||||||     ||||  |||  ||||||||| | |||||||||||||||||    
T  15735196 agaacagtgttctatttaaattttttaaaagataaatacaagacgtcgtatatat-----acaccaaaaaatgaaaatcattaccgtatacatgaggaac 15735102  T
Q  476 ttcaaatcatcctcccaaaaaaca 499  Q
    |||||| || ||||| ||||||||    
T  15735101 ttcaaaccaccctccaaaaaaaca 15735078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 5128864 - 5128942
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||||||||||| |||||  |||||||||   | ||| || |||||||||| ||| |||||||||||||||||    
T  5128864 tttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaac 5128942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 471
Target Start/End: Complemental strand, 1105632 - 1105543
Alignment:
Q  382 atgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||| ||||| | |||||||||||||||||| |||| | ||||||||| | |||||  | |||||||||| ||| || ||||||||||    
T  1105632 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgag 1105543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 373 - 474
Target Start/End: Complemental strand, 35465215 - 35465115
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||||||  ||||| | |||||| ||||||||||  |||||  ||||||||| | |||||  ||| |||||||| ||| ||||||||||||||    
T  35465215 aaaagaacaatgttatatttatattttttacaagataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgagg 35465117  T
Q  473 aa 474  Q
    ||    
T  35465116 aa 35465115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 481
Target Start/End: Original strand, 36362869 - 36362976
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||||||||| ||  |||| | |||||||||||||||||| | |||  |||||||||  |||||| |||| ||| |||||||| || ||||||| |||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat-agg 36362967  T
Q  473 aacttcaaa 481  Q
    ||| |||||    
T  36362968 aacctcaaa 36362976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 10428202 - 10428273
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaa 451  Q
    |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || ||||||||    
T  10428202 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaa 10428273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 464
Target Start/End: Original strand, 16882393 - 16882484
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtat 464  Q
    |||| |||||||||| ||||| |||||||||||||||||||  |||||  || |||||  | |||||  |||||||||||| ||| ||||||    
T  16882393 aaaaaaacaatgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 420
Target Start/End: Complemental strand, 55255366 - 55255319
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtg 420  Q
    |||||| |||||||||||||| | |||||||||||||||||| |||||    
T  55255366 aaaagagcaatgttccatttatattttttaaaagataaatacaaggtg 55255319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 450
Target Start/End: Complemental strand, 17679509 - 17679432
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaa 450  Q
    |||||| |||| ||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||    
T  17679509 aaaagagcaatattctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 453
Target Start/End: Complemental strand, 51964820 - 51964737
Alignment:
Q  373 aaaagaacaatgttccatttagacttttt---aaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaat 453  Q
    |||||| |||||||| ||||| | |||||   ||||||||||||| |||||  ||||||||| ||||||| || ||||||||||    
T  51964820 aaaagagcaatgttctatttatattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaat 51964737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 414
Target Start/End: Complemental strand, 24614061 - 24614021
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatac 414  Q
    |||||||||||||| ||||| | ||||||||||||||||||    
T  24614061 aaagaacaatgttctatttaaattttttaaaagataaatac 24614021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 475
Target Start/End: Complemental strand, 24969484 - 24969444
Alignment:
Q  435 tacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||| ||||||||||||| ||| |||||||||||||||||    
T  24969484 tacacccaaaggtgaaaatgactaccgtatacatgaggaac 24969444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 5e-45; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 297 - 497
Target Start/End: Complemental strand, 45758688 - 45758485
Alignment:
Q  297 ggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnn--aaaagaacaatgttccattta 393  Q
    |||||||||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||          ||||||||||||||| |||||    
T  45758688 ggccgttcctacgaatccagaggctcggctctgtaagtgaaaagaggtccgaaataaaataaaaatgtatattttttttaaaagaacaatgttctattta 45758589  T
Q  394 gactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaa 493  Q
     | |||||||||||||||| | ||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||| ||||| || | ||||||    
T  45758588 aattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccatcccaa 45758489  T
Q  494 aaaa 497  Q
    ||||    
T  45758488 aaaa 45758485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 294 - 497
Target Start/End: Original strand, 38546954 - 38547158
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    ||||||||||||||||||| |||||| |||| |||| |||||||||| || ||||||||||||||||| | |         ||||| |||||||| ||||    
T  38546954 cagggccgttcctacgaatttggaggatcggctctgcaagtgaaaaggggcccgtaataaaataaaaaggaatttttttttaaagatcaatgttctattt 38547053  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctccca 492  Q
    | | |||||||||||||||||| |||||  ||||||||||| ||||| |||| ||||||||||||  | |||||||||||||| ||||| || |||||||    
T  38547054 aaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaacctcaaaccaccctccca 38547153  T
Q  493 aaaaa 497  Q
    |||||    
T  38547154 aaaaa 38547158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 294 - 497
Target Start/End: Original strand, 39134638 - 39134845
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnn--aaaagaacaatgttccat 390  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||||   |||||||||||||||| |||          ||||||||||||||| ||    
T  39134638 cagggccgttcctacgaatccggaggctcggctccgtaagtgaaaagagactcgtaataaaataaaaacgtattttttttttaaaagaacaatgttctat 39134737  T
Q  391 ttagactttttaaaa-gataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctc 489  Q
    ||| | ||||||||| ||||||||| ||||| ||||||||||  |||||| ||||||||| ||||||| | ||||||||||||||| ||||| || ||||    
T  39134738 ttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgaggaacctcaaaccaccctc 39134837  T
Q  490 ccaaaaaa 497  Q
    ||||||||    
T  39134838 ccaaaaaa 39134845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 500
Target Start/End: Complemental strand, 26804139 - 26803936
Alignment:
Q  292 agcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccat 390  Q
    ||||||| ||||||||  |||||||||  | | |||||||| ||||||||||||||||||||||| |||| |||         ||||||||||| |  ||    
T  26804139 agcagggtcgttcctataaatctggagacttgattctgtaa-tgaaaagaggtccgtaataaaatgaaaacgtattttttt--aaagaacaatgctatat 26804043  T
Q  391 ttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcc 490  Q
    ||| | |||||||||||||||||| || ||| ||||||||| |||||||   ||||||||||||||| ||||||||||||| ||| ||||| || |||||    
T  26804042 ttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaaacctcaaaccaccctcc 26803946  T
Q  491 caaaaaacac 500  Q
    ||||||||||    
T  26803945 caaaaaacac 26803936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 497
Target Start/End: Complemental strand, 5533508 - 5533303
Alignment:
Q  293 gcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatt 391  Q
    ||||| ||||| ||||||||| ||||| | |  |||||||||||||||||  |||||||||||||||||||||        ||||||||||| ||| |||    
T  5533508 gcaggcccgtttctacgaatccggaggcttgactctgtaagtgaaaagagacccgtaataaaataaaaatgtattttttt-aaaagaacaatattctatt 5533410  T
Q  392 tagacttttt-aaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcc 490  Q
    || | ||||| |||||||||| || |||||  |||||||||   |||| |||||||||||||||||| ||||||||||||||||  ||||| || | |||    
T  5533409 taaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgaggaaactcaaaccaccatcc 5533310  T
Q  491 caaaaaa 497  Q
    |||||||    
T  5533309 caaaaaa 5533303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 475
Target Start/End: Complemental strand, 17169151 - 17168969
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    ||||||||| |||| ||||  ||||| |||| |||| || |||||||||||| || ||||||| |||| |||        |||| | |||||||| ||||    
T  17169151 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctattt 17169052  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    | | |||||||||||||||||  |||||||||||||||| | ||||| ||||||||||||| ||| || ||||||||||||||    
T  17169051 atattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaac 17168969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 327 - 497
Target Start/End: Original strand, 43235720 - 43235892
Alignment:
Q  327 tgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagacttttta--aaagataaatacgaggtgttgt 424  Q
    |||||||||||||||| | |||||||||||||||||||         |||||| ||||||| ||||| | |||||   |||||||||||| || ||| ||    
T  43235720 tgtaagtgaaaagaggcctgtaataaaataaaaatgtatttttttctaaagaaaaatgttctatttaaatttttttttaaagataaatacaagatgtcgt 43235819  T
Q  425 atatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    |||||||   ||||| |||||||||||||||||  |||||||||||||||| ||||| || | ||||||||||    
T  43235820 atatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctcaaaccaccatcccaaaaaa 43235892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 27559745 - 27559650
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||| ||||| | |||||||||||||||||  |||||| ||||||||| | ||||| ||||||||||||| ||| |||||||||||||||||    
T  27559745 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 27559650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 5316795 - 5316693
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  5316795 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 5316696  T
Q  473 aac 475  Q
    |||    
T  5316695 aac 5316693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 23185542 - 23185440
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  23185542 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagg 23185443  T
Q  473 aac 475  Q
    |||    
T  23185442 aac 23185440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 495
Target Start/End: Complemental strand, 38853637 - 38853516
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||| ||||| ||||| | |||||||| ||||||||| |||||| ||||||||||  || |  ||||||||||||||||| |||||||||||| |    
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatga-g 38853539  T
Q  473 aacttcaaatcatcctcccaaaa 495  Q
    ||| ||||| |||| ||||||||    
T  38853538 aacctcaaaccatcatcccaaaa 38853516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 44655856 - 44655754
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||| ||||||||| | ||||| || |||| ||||| ||| ||||||||||||||    
T  44655856 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagg 44655757  T
Q  473 aac 475  Q
    |||    
T  44655756 aac 44655754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 382 - 474
Target Start/End: Complemental strand, 16140161 - 16140069
Alignment:
Q  382 atgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaa 474  Q
    |||||| ||||| | |||||||||||||||||| |||||||||||||||| | |||||  | |||||||||| ||| ||||||||||||||||    
T  16140161 atgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaa 16140069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 50146411 - 50146309
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||||||| ||||| ||||||| |||||||||| | |||||  || ||||||||||| || ||||||| ||||||| | || |||||||||||    
T  50146411 aaaagaacaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgagg 50146312  T
Q  473 aac 475  Q
    |||    
T  50146311 aac 50146309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 475
Target Start/End: Original strand, 9173026 - 9173123
Alignment:
Q  378 aacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||  ||||||||||||| ||| |||||||||||||||||    
T  9173026 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaac 9173123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 475
Target Start/End: Original strand, 9181008 - 9181105
Alignment:
Q  378 aacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||  ||||||||||||| ||| |||||||||||||||||    
T  9181008 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaac 9181105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 496
Target Start/End: Complemental strand, 6221867 - 6221670
Alignment:
Q  298 gccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagac 396  Q
    |||||| ||||||||||||||  |||||||||||| |||||||||  |||||||||||||||||| ||         |||||||||||||| ||||| |     
T  6221867 gccgtttctacgaatctggagactcggttctgtaaatgaaaagagacccgtaataaaataaaaatttatttttttt-aaagaacaatgttctattta-aa 6221770  T
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaa 496  Q
    |||||||||||||||||| | |||  ||||||| | | ||||   ||| |||||||||| |  |||||| ||||||||| ||||| || ||| |||||||    
T  6221769 tttttaaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgaggaacctcaaaccacccttccaaaaa 6221670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 3406533 - 3406431
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||| |||||  |||||||||   |||||||  |||||||||| ||| ||||||||||||||    
T  3406533 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagg 3406434  T
Q  473 aac 475  Q
    |||    
T  3406433 aac 3406431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 3440287 - 3440389
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||| |||||  |||||||||   |||||||  |||||||||| ||| ||||||||||||||    
T  3440287 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagg 3440386  T
Q  473 aac 475  Q
    |||    
T  3440387 aac 3440389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 5027664 - 5027562
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| || |||| ||||||    
T  5027664 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgagg 5027565  T
Q  473 aac 475  Q
    |||    
T  5027564 aac 5027562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 14146415 - 14146313
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || || ||||||| ||| ||||||||||||||    
T  14146415 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagg 14146316  T
Q  473 aac 475  Q
    |||    
T  14146315 aac 14146313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 50881545 - 50881443
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||| ||||||||| | ||||   | |||||||||| ||| | ||||||||||||    
T  50881545 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgagg 50881446  T
Q  473 aac 475  Q
    |||    
T  50881445 aac 50881443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 475
Target Start/End: Original strand, 4971617 - 4971718
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    ||||| |||||||| ||||| | |||||||||||||||||| ||||   ||||||||| | ||||| || | |||||||| ||| |||||||||||||||    
T  4971617 aaagagcaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgagga 4971716  T
Q  474 ac 475  Q
    ||    
T  4971717 ac 4971718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 475
Target Start/End: Complemental strand, 6771897 - 6771804
Alignment:
Q  382 atgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| ||||||||| |||||||    
T  6771897 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaac 6771804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 484
Target Start/End: Original strand, 10925870 - 10926063
Alignment:
Q  292 agcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccat 390  Q
    ||||| ||||||||||| ||| |||||| |||  ||| |||||||||||| | |||||||||||||||||  ||        ||||||||||| ||| ||    
T  10925870 agcagagccgttcctacaaatttggaggctcgactctctaagtgaaaagaagcccgtaataaaataaaaacttattttttt-aaaagaacaatattctat 10925968  T
Q  391 tta-gactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatca 484  Q
    ||| |  ||||||||| |||||||| | |||  ||||||||| ||| ||  ||||| ||||||||||| ||||||||||||||| | ||||||||    
T  10925969 ttaagtatttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgaggatcctcaaatca 10926063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 475
Target Start/End: Original strand, 1366878 - 1366978
Alignment:
Q  375 aagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaa 474  Q
    |||| |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||| ||||||| ||| ||||||||| ||||||    
T  1366878 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaa 1366977  T
Q  475 c 475  Q
    |    
T  1366978 c 1366978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 497
Target Start/End: Complemental strand, 33170874 - 33170750
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||| |||||||||  ||||| | |||||||||  ||||||| | |||||||||||||| | |||||  || ||||||||||||| |||||||||||||     
T  33170874 aaaaaaacaatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgaga 33170775  T
Q  473 aacttcaaatcatcctcccaaaaaa 497  Q
    ||| | ||| || ||||| ||||||    
T  33170774 aaccttaaaccaccctcctaaaaaa 33170750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 467
Target Start/End: Original strand, 21740935 - 21741029
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtataca 467  Q
    |||||| |||||||| ||||  | |||||||||||||||||| |||||  ||||||||| ||||||| || |||||||||| ||| || ||||||    
T  21740935 aaaagagcaatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 40501812 - 40501890
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||||||||||  |||||| ||||||||| | ||||| ||||||| ||||| ||| |||||||||||| ||||    
T  40501812 tttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaac 40501890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 19955825 - 19955730
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||| || ||||| | |||||||||||||||||  ||||   ||||||||| | ||||| ||||||||||||| ||| ||||||| |||||||||    
T  19955825 caatgatctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaac 19955730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 465
Target Start/End: Complemental strand, 6889726 - 6889634
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtata 465  Q
    |||||| |||||||| ||||| | |||||||||||||||||| | || | ||||||||| | ||||  || |||||||||| | |||||||||    
T  6889726 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6889634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 465
Target Start/End: Complemental strand, 6891572 - 6891480
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtata 465  Q
    |||||| |||||||| ||||| | |||||||||||||||||| | || | ||||||||| | ||||  || |||||||||| | |||||||||    
T  6891572 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 476
Target Start/End: Original strand, 51607461 - 51607541
Alignment:
Q  397 tttttaaaagataaatacgaggtgtt-gtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaact 476  Q
    |||||||||||||||||  |||||   ||||||||| | ||||| |||| |||||||| ||| ||||||||||||||||||    
T  51607461 tttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaact 51607541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 27906727 - 27906774
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtg 420  Q
    |||||| |||||||||||||| | |||||||||||||||||| |||||    
T  27906727 aaaagagcaatgttccatttatattttttaaaagataaatacaaggtg 27906774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 41697135 - 41697237
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||| | || | |||||||||   ||||  || | |||||||| ||| ||||||||||||||    
T  41697135 aaaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgagg 41697234  T
Q  473 aac 475  Q
    |||    
T  41697235 aac 41697237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 453
Target Start/End: Original strand, 22865459 - 22865538
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaat 453  Q
    |||||| |||||||| ||||| | |||||||||||||||||| || || | |||||||  | ||||| |||||||||||||    
T  22865459 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 295 - 497
Target Start/End: Original strand, 7944442 - 7944645
Alignment:
Q  295 agggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattta 393  Q
    ||||||||||||||||||| ||| | ||| |||||||| ||||||||||||||||||||||||||||||||        ||||||||||||||  |||||    
T  7944442 agggccgttcctacgaatcaggaagctcgattctgtaattgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaatgttttattta 7944541  T
Q  394 gactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaa 493  Q
     | ||||||||| |||||||| |||||  ||||||||||  ||||| ||||||||||||||||| ||||||||||||||||| ||||| || | ||||||    
T  7944542 aattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccatcccaa 7944641  T
Q  494 aaaa 497  Q
    ||||    
T  7944642 aaaa 7944645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 300 - 481
Target Start/End: Complemental strand, 15078936 - 15078754
Alignment:
Q  300 cgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactt 398  Q
    |||||||||||||||| ||| || | |||||||||||||||| ||||||||||||||||||| |||        ||||||| ||||||| ||||| | ||    
T  15078936 cgttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaaatt 15078837  T
Q  399 tttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
    |||||||||||||||  ||||| ||||||||||  |||||| |||| ||||||||||||  |||||||||||||||| |||||    
T  15078836 tttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 15078754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 300 - 497
Target Start/End: Original strand, 15167338 - 15167538
Alignment:
Q  300 cgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnn--aaaagaacaatgttccatttagac 396  Q
    |||||||||||||||| ||| || | |||||||||||||| | ||||||||||||||||||| |||          ||||||||||||||| ||||| |     
T  15167338 cgttcctacgaatctgaaggctctgctctgtaagtgaaaaaaagtccgtaataaaataaaaacgtattttatttttaaaagaacaatgttctatttaaat 15167437  T
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaa 496  Q
    |||||||||||||||||  | |||||||||||||| ||||||| |||| ||||||||||||  |||||||||||||||| ||||| || ||| |||||||    
T  15167438 tttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccacccttccaaaaa 15167537  T
Q  497 a 497  Q
    |    
T  15167538 a 15167538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 302 - 456
Target Start/End: Original strand, 30674330 - 30674485
Alignment:
Q  302 ttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttt 400  Q
    |||||||||||||||||| |||| ||||||||||||||||||  |||||||||||||||| |||         |||||||||||||| ||||| |  |||    
T  30674330 ttcctacgaatctggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtatttttttttaaagaacaatgttctatttaaatgttt 30674429  T
Q  401 taaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcac 456  Q
    |||||||||||||  |||||| ||||||||| ||||||||||||||||||||||||    
T  30674430 taaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 325 - 481
Target Start/End: Original strand, 5973058 - 5973214
Alignment:
Q  325 tctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgt 424  Q
    ||||||| |||||||||||| |||||||||||||||||||        ||||||||||||||| ||||| | |||||||||||||||||| |||||| ||    
T  5973058 tctgtaaatgaaaagaggtctgtaataaaataaaaatgtattcgttttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgt 5973157  T
Q  425 atatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
    ||||||||  ||||| || || ||||||||| | ||||||||| ||||||| |||||    
T  5973158 atatatgttgtacacccatagatgaaaatcattaccgtatacacgaggaacctcaaa 5973214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 373 - 481
Target Start/End: Complemental strand, 11290288 - 11290180
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||||||  ||||| | |||||||||||||||||| |||||| ||||||||||  ||||||||||||||||||||||| |||||||||||||     
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagc 11290189  T
Q  473 aacttcaaa 481  Q
    ||| |||||    
T  11290188 aacctcaaa 11290180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 320 - 471
Target Start/End: Original strand, 34789808 - 34789959
Alignment:
Q  320 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggt 419  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||        |||||||| |||||| ||||| |  | ||||||||||||||| || |    
T  34789808 tcggctctataagtgaaaaaaggtccgtaataaaataaaaatgtattttttttaaaagaacgatgttctatttaaatctcttaaaagataaatacaagat 34789907  T
Q  420 gttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    || ||||||||||  ||||| ||||||||||||||||| |||||||||||||    
T  34789908 gtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 34789959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 294 - 481
Target Start/End: Complemental strand, 8646389 - 8646202
Alignment:
Q  294 cagggccgttcctacgaatctggaggt-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    ||||||||||| |||||||||| | || || | |||||||| ||||||| ||| |||||||||||||| |||        ||||||||||||||| ||||    
T  8646389 cagggccgttcttacgaatctgaaagttcgatcctgtaagtcaaaagagatccttaataaaataaaaacgtaatttttttaaaagaacaatgttctattt 8646290  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
    | | |||||||||||||||||| |||| | |||||||||  |||||| |||| |||||||||||| |||||||||| || ||| |||||    
T  8646289 aaattttttaaaagataaatacaaggtatcgtatatatg-catacacgcaaatgtgaaaatcactaccgtatacataagaaacctcaaa 8646202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 496
Target Start/End: Original strand, 39332327 - 39332527
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    |||||||||||||||||||  ||||| ||||||||||| ||||||||||   |||||||||||||||| ||          |||||||||||||| ||||    
T  39332327 cagggccgttcctacgaattcggaggctcggttctgtaggtgaaaagagactcgtaataaaataaaaaagtttttttt---aaagaacaatgttctattt 39332423  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctccca 492  Q
    |   |||| ||||||||||||| ||||||  |||||| | | ||||  ||||||||||||||||| ||||||||||||||||| ||||| || |||| ||    
T  39332424 aattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctctca 39332523  T
Q  493 aaaa 496  Q
    ||||    
T  39332524 aaaa 39332527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 373 - 506
Target Start/End: Original strand, 41677172 - 41677306
Alignment:
Q  373 aaaagaacaatgttccatttagactttt-taaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    ||||||||||||||| ||||| | |||| |||||||||||||| || ||| ||||||||| ||||||   |||||||||||||||| | |||||||||||    
T  41677172 aaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T
Q  472 gaacttcaaatcatcctcccaaaaaacacctacct 506  Q
    |||| ||||| || ||||| |||||||||| ||||    
T  41677272 gaacctcaaaccaccctccaaaaaaacacccacct 41677306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 473
Target Start/End: Original strand, 34048633 - 34048806
Alignment:
Q  300 cgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactt 398  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||  ||||||||||||||||||||          |||||||||||||| ||||| || |    
T  34048633 cgttcctacgaatttggaggctcggctctgtaagtgaaaatagacccgtaataaaataaaaatgtttttttt---aaagaacaatgttctatttaaacat 34048729  T
Q  399 tttaaaagataaatacgaggtgt--tgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    |||||||||||||||| | ||||  | ||||||| |||||||| ||||| ||||||||||| | |||||||||||||    
T  34048730 tttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgagga 34048806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 5942776 - 5942676
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaa 496  Q
    |||||||||||||||||| || ||| |||||| || | ||||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||    
T  5942776 tttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcccaaaaa 5942677  T
Q  497 a 497  Q
    |    
T  5942676 a 5942676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 45475921 - 45475819
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  45475921 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagg 45475822  T
Q  473 aac 475  Q
    |||    
T  45475821 aac 45475819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 42600879 - 42600784
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||| || ||||| | |||||||||||||||||  |||||  ||||||||||| ||||| ||||||||||||| ||| |||||||||||||||||    
T  42600879 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 42600784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 23606628 - 23606730
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||| ||||| ||| ||||||||||||||    
T  23606628 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgagg 23606727  T
Q  473 aac 475  Q
    |||    
T  23606728 aac 23606730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 30883433 - 30883331
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| | |||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  30883433 aaaagagcaatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 30883334  T
Q  473 aac 475  Q
    |||    
T  30883333 aac 30883331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 374 - 475
Target Start/End: Original strand, 23798261 - 23798362
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    ||||| |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| |||| |||||||| ||| |||||||||||||||    
T  23798261 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgagga 23798360  T
Q  474 ac 475  Q
    ||    
T  23798361 ac 23798362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 413
Target Start/End: Original strand, 38009070 - 38009191
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaa-tgtannnnnnnnaaaagaacaatgttccatt 391  Q
    |||||||||||||| ||||| ||||| |||||||||||| |||||||| ||||||||||||||||||| | |         ||||||||||||||| |||    
T  38009070 cagggccgttcctatgaatccggaggctcggttctgtaactgaaaagaagtccgtaataaaataaaaacttttttttttttaaaagaacaatgttctatt 38009169  T
Q  392 tagactttttaaaagataaata 413  Q
    || | |||||||||||||||||    
T  38009170 taaaatttttaaaagataaata 38009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 8102992 - 8102908
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
    |||||||||||||||||| |||||  ||||||||| | |||||  |||||||||||||| | ||||||||||||||||| |||||    
T  8102992 tttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctcaaa 8102908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 397 - 500
Target Start/End: Complemental strand, 5721639 - 5721536
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaa 496  Q
    |||||||||||||||||| |||||   ||||||   | ||||| |||| |||||||||||| |||||||| |||||||| ||||| || |||||||||||    
T  5721639 tttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctcaaaccaccctcccaaaaa 5721540  T
Q  497 acac 500  Q
    ||||    
T  5721539 acac 5721536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 403 - 494
Target Start/End: Original strand, 25561523 - 25561613
Alignment:
Q  403 aaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaa 494  Q
    |||||||||||| |||||  ||||||||| |||| || |||| |||||||||||||||||||||||||||||| ||||| || ||| |||||    
T  25561523 aaagataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacctcaaaccacccttccaaa 25561613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 2952220 - 2952322
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| | |||  ||||||||| | ||||| || || ||||||| ||| ||||||||||||||    
T  2952220 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagg 2952319  T
Q  473 aac 475  Q
    |||    
T  2952320 aac 2952322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 10917495 - 10917393
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||| ||||||| || ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| || |||||||||||    
T  10917495 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgagg 10917396  T
Q  473 aac 475  Q
    |||    
T  10917395 aac 10917393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 13534686 - 13534787
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| || ||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  13534686 aaaagagcaatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 13534784  T
Q  473 aac 475  Q
    |||    
T  13534785 aac 13534787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 13624226 - 13624327
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| || ||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  13624226 aaaagagcaatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 13624324  T
Q  473 aac 475  Q
    |||    
T  13624325 aac 13624327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 471
Target Start/End: Complemental strand, 41879285 - 41879187
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    ||||||||||||||| ||||| | |||||||||||||||||| ||||   ||||||||| | ||||  ||||||||||||| ||| ||| |||||||||    
T  41879285 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgag 41879187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 5860744 - 5860841
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    ||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| || ||||||||||    
T  5860744 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgag 5860841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 5942845 - 5942780
Alignment:
Q  300 cgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgta 364  Q
    |||||||||||||| ||| | ||| ||||||||||||||||||| |||||||||||||||||||||    
T  5942845 cgttcctacgaatccggaagctcgattctgtaagtgaaaagaggaccgtaataaaataaaaatgta 5942780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 481
Target Start/End: Original strand, 14509905 - 14510089
Alignment:
Q  300 cgttcctacgaatctggaggt-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgta---nnnnnnnnaaaagaacaatgttccatttaga 395  Q
    ||||||||||||| ||||| | |||||||| ||||||||| ||| |||||||||||||||||||||            |||||||||||||| ||||| |    
T  14509905 cgttcctacgaatttggagattcggttctgcaagtgaaaataggcccgtaataaaataaaaatgtattttttttttttaaagaacaatgttcaatttaaa 14510004  T
Q  396 ctttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtg-aaaatcactgccgtatacatgaggaacttcaaa 481  Q
     ||||||||||| |||||  |||||| |||||||   | ||||| |||| ||| ||||||||| ||||||||||||| ||| |||||    
T  14510005 ttttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagtaacctcaaa 14510089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 497
Target Start/End: Original strand, 23941095 - 23941214
Alignment:
Q  378 aacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaactt 477  Q
    |||||||||  ||||| | |||||||||||||||||| ||||||  |||||| | ||||||| ||||| ||||||||||   | |||| | ||||||| |    
T  23941095 aacaatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcacaatcatatatacgaggaacct 23941194  T
Q  478 caaatcatcctcccaaaaaa 497  Q
    |||| || ||||||||||||    
T  23941195 caaaccaccctcccaaaaaa 23941214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 37430157 - 37430259
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||| |||||  ||||||||| | |||||  | |||| ||||| ||| ||||||||||||||    
T  37430157 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgagg 37430256  T
Q  473 aac 475  Q
    |||    
T  37430257 aac 37430259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 38843417 - 38843473
Alignment:
Q  297 ggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataa 352  Q
    |||||||||||||||| |||||| |||| ||| ||||||||||||||||||||||||    
T  38843417 ggccgttcctacgaatttggaggctcggctctctaagtgaaaagaggtccgtaataa 38843473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 3048540 - 3048618
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||||||||||| |||||  ||||||||| | |||||  | || ||||||| ||| ||||||||| |||||||    
T  3048540 tttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaac 3048618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 9108596 - 9108551
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggt 419  Q
    |||||||||||||| ||||| | |||||||||||||||||| ||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 34812674 - 34812747
Alignment:
Q  292 agcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgta 364  Q
    |||||| |||||||||| |||| || || |||  |||||||||||||||||||  || ||||||||||||||||    
T  34812674 agcaggaccgttcctacaaatccgggggctcgactctgtaagtgaaaagaggtatgtcataaaataaaaatgta 34812747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 294 - 498
Target Start/End: Original strand, 230780 - 230983
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    |||||||||||||||||||| ||| | |||| |||||||| ||||||||| |||||||||||  ||||||||        ||||||||||||||| ||||    
T  230780 cagggccgttcctacgaatccggaagctcggatctgtaagggaaaagaggcccgtaataaaa--aaaatgtatattttttaaaagaacaatgttctattt 230877  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctccca 492  Q
    | | || |||||||||||||   |||||||||||||||| |||| || ||||||||||||||||| || |||||||||||||||||||| || |||||||    
T  230878 aaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgaggaacttcaaaccaccctccca 230977  T
Q  493 aaaaac 498  Q
    ||||||    
T  230978 aaaaac 230983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 294 - 473
Target Start/End: Original strand, 26718865 - 26719045
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||  ||||||||||||||||| |||         |||||| ||||||| ||||    
T  26718865 cagggccgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctattt 26718964  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    | | |||||||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  26718965 aaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 294 - 473
Target Start/End: Original strand, 26988609 - 26988789
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||  ||||||||||||||||| |||         |||||| ||||||| ||||    
T  26988609 cagggccgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctattt 26988708  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    | | |||||||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  26988709 aaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 292 - 497
Target Start/End: Original strand, 11242233 - 11242438
Alignment:
Q  292 agcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccat 390  Q
    ||||||| |||||||| ||||| ||||| |||| |||||||||||||||||   |||||||||||||||| |||        ||||||||||||||| ||    
T  11242233 agcagggtcgttcctatgaatccggaggctcggctctgtaagtgaaaagagactcgtaataaaataaaaacgtattctttt-aaaagaacaatgttctat 11242331  T
Q  391 ttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcc 490  Q
    |||   |||||||||||||||||| |  || |||||||||||||||||  ||||| || |||||||| ||||||||||||||||| ||||| || |||||    
T  11242332 ttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgaggaacctcaaaccaccctcc 11242431  T
Q  491 caaaaaa 497  Q
    |||||||    
T  11242432 caaaaaa 11242438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 305 - 497
Target Start/End: Complemental strand, 34426076 - 34425883
Alignment:
Q  305 ctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaa 403  Q
    ||||||||||| ||| ||||||||||||||||||| ||    |||||||||||||||||||        ||||||||||||||| ||||  | |||||||    
T  34426076 ctacgaatctgaaggctcggttctgtaagtgaaaaaagacatgtaataaaataaaaatgtatcttttttaaaagaacaatgttctatttcaattttttaa 34425977  T
Q  404 aagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    ||||||||||| |||||  |||||||||||||||||  |||| | ||||||| | ||||||||||||||||| ||||| || ||||||||||||    
T  34425976 aagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgaggaacctcaaaccaccctcccaaaaaa 34425883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 321 - 497
Target Start/End: Original strand, 1366470 - 1366646
Alignment:
Q  321 cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggtg 420  Q
    ||||||||||||| ||||||||||||||| |||||||||| |||        ||||||||||||||| ||||| | |||||| ||||||||||| || ||    
T  1366470 cggttctgtaagtaaaaagaggtccgtaaaaaaataaaaacgtattttttttaaaagaacaatgttctatttaaattttttataagataaatacaagatg 1366569  T
Q  421 ttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    | ||||||||| |||||||  ||| |||||||||||| ||||||| ||||||||| ||| | || ||||||||||||    
T  1366570 tggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgaggaacctcataccaccctcccaaaaaa 1366646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 320 - 500
Target Start/End: Complemental strand, 10543829 - 10543651
Alignment:
Q  320 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggt 419  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||        ||| ||| ||||||||| ||| | |||||||||||||||||  ||||    
T  10543829 tcggttctataagtgaaaagagatccgtaataaaataaaaatgtattttttttaaa-gaataatgttccacttaaattttttaaaagataaatataaggt 10543731  T
Q  420 gttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaacac 500  Q
    | |||||||||| ||||||  ||||||||||||||||| |||||||||| |||||  ||||| || |||||||||||||||    
T  10543730 gatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat-aggaatctcaaaccaccctcccaaaaaacac 10543651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 374 - 506
Target Start/End: Original strand, 14318382 - 14318514
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    |||||||||||||| ||||| | |||||||||||||||||| |||||| ||||||||||||||||  ||||  ||||||||||| |||||||||||||||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  474 acttcaaatcatcctcccaaaaaacacctacct 506  Q
    || ||||| || ||||| |||||||||| ||||    
T  14318482 acctcaaaccaccctccaaaaaaacacccacct 14318514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 295 - 495
Target Start/End: Original strand, 2530815 - 2531015
Alignment:
Q  295 agggccgttcctacgaatctggaggtc-ggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattta 393  Q
    ||||||| ||||||||||||| ||||  || |||||||||||||||||| |||||||||||||||||||||        ||||||| ||||||| |||||    
T  2530815 agggccgctcctacgaatctgaaggtttggctctgtaagtgaaaagaggcccgtaataaaataaaaatgtatttttcttaaaagaa-aatgttctattta 2530913  T
Q  394 gactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaa 493  Q
       |||||||||||||||||| | |||| ||||||||  | ||||  ||||||||||||||||| | ||||||||||||||| ||||| || |||| |||    
T  2530914 agttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacctcaaaccaccctctcaa 2531013  T
Q  494 aa 495  Q
    ||    
T  2531014 aa 2531015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 2024600 - 2024762
Alignment:
Q  336 aaagaggtccgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtga 434  Q
    ||||||||||||||||||||||||| |||         ||||||||||||||| ||||| | ||||| |||||||||||| | |||  ||||||||||||    
T  2024600 aaagaggtccgtaataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtga 2024699  T
Q  435 tacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    ||||| ||||| ||||||||||| || |||||||||||| | ||||| |||||||||||||||    
T  2024700 tacacccaaagatgaaaatcactaccatatacatgaggatcctcaaaccatcctcccaaaaaa 2024762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 294 - 474
Target Start/End: Complemental strand, 10407645 - 10407464
Alignment:
Q  294 cagggccgttcctacgaatctggaggt-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    ||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||| |||        ||||||||||||||| ||||    
T  10407645 cagggtcgttcctacgaatctagaggttcggttctataagtgaaaagaggtccataataaaataaaaaagtattttttttaaaagaacaatgttctattt 10407546  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaa 474  Q
    | | ||||||||||||||| || |||||| ||| ||||||  ||||   ||| |||||||| ||| |||||| |||||||||    
T  10407545 aaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgaggaa 10407464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 36868872 - 36868996
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||||||| |||||   |||||||||||||||||| |||||| ||||||||||| ||||| |||| |||||||||||| ||||||||||||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgagg 36868971  T
Q  473 aacttcaaatcatcctcccaaaaaa 497  Q
    ||  ||||| || |||||| |||||    
T  36868972 aatctcaaaccaccctccccaaaaa 36868996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 298 - 477
Target Start/End: Complemental strand, 24395918 - 24395739
Alignment:
Q  298 gccgttcctacgaatctggaggt-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagac 396  Q
    |||||||||||||||| |||||| ||| ||||||| | ||||||   |||||||||||||||||||||        |||| || ||||||| ||||| |     
T  24395918 gccgttcctacgaatccggaggtacggctctgtaaataaaaagaaacccgtaataaaataaaaatgtattttttttaaaa-aataatgttctatttaaat 24395820  T
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaactt 477  Q
    |||||||||||||||||| |||||||||||||||   |||||  ||||||||||||||||  ||||||| |||||||||||    
T  24395819 tttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaactt 24395739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 380 - 475
Target Start/End: Original strand, 16198797 - 16198892
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||| ||||| | |||||||||||||||||  |||||| ||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||    
T  16198797 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaac 16198892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 497
Target Start/End: Complemental strand, 2412236 - 2412068
Alignment:
Q  325 tctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgt 424  Q
    ||||||||||||||||||||||||||||||||| | | |          |||||||||||||| ||||| | ||||||||| |||||||| | |||| ||    
T  2412236 tctgtaagtgaaaagaggtccgtaataaaataatatttttttttt----aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgt 2412141  T
Q  425 atatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    ||||||| ||| ||  |||| |||||||||||| | ||||||||||||||| ||||| || |||||| |||||    
T  2412140 atatatgcgatgcatccaaatgtgaaaatcactactgtatacatgaggaacctcaaaccaccctccctaaaaa 2412068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 30854433 - 30854331
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | |||||||| |||||||||| |||  |||||||||||||    
T  30854433 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgagg 30854334  T
Q  473 aac 475  Q
    |||    
T  30854333 aac 30854331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 34756362 - 34756464
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  34756362 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 34756461  T
Q  473 aac 475  Q
    |||    
T  34756462 aac 34756464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 38869359 - 38869457
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||| |||||||| ||||| | |||||||||||||||||  |||||| ||||||||| | ||||| ||||||||||||| ||| |||||||||||||    
T  38869359 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 38869457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 373 - 481
Target Start/End: Complemental strand, 33037884 - 33037776
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||||||  ||||| | |||||||||||||||||| || | | ||||||||||  ||||| |||||||||||| || | ||||||||||||||    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  473 aacttcaaa 481  Q
    ||| |||||    
T  33037784 aacctcaaa 33037776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 9364388 - 9364293
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| |||||||||||||||||    
T  9364388 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 9364293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 27079115 - 27079013
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | |||||  |||||||||||| ||| | ||||||||||||    
T  27079115 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgagg 27079016  T
Q  473 aac 475  Q
    |||    
T  27079015 aac 27079013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 363
Target Start/End: Complemental strand, 27530678 - 27530608
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgt 363  Q
    ||||||||||||||||||| | |||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  27530678 cagggccgttcctacgaatttagaggctcggttctataagtgaaaagaggcccgtaataaaataaaaatgt 27530608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 28822338 - 28822440
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| |||||||||||| |    
T  28822338 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatg 28822437  T
Q  473 aac 475  Q
    |||    
T  28822438 aac 28822440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 413
Target Start/End: Original strand, 35080688 - 35080806
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    ||||||||||||||||||||| |||| |||  |||||||||||||||||| |||||||||||||||||  ||        ||||||||||||||  ||||    
T  35080688 cagggccgttcctacgaatctagaggctcgactctgtaagtgaaaagagggccgtaataaaataaaaa--tattttttttaaaagaacaatgttttattt 35080785  T
Q  393 agactttttaaaagataaata 413  Q
    | | |||||||||||||||||    
T  35080786 aaattttttaaaagataaata 35080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 16592070 - 16592172
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | ||| ||||||||||||||  ||||| ||||||||| | ||||| || |||||||||| ||| ||||||| ||||||    
T  16592070 aaaagagcaatgttctatttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgagg 16592169  T
Q  473 aac 475  Q
    |||    
T  16592170 aac 16592172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 23284058 - 23284160
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | ||||||||   ||||||| |||||| ||||||||| | ||||| ||||| ||||||| ||| ||||||||||||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgagg 23284157  T
Q  473 aac 475  Q
    |||    
T  23284158 aac 23284160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 481
Target Start/End: Original strand, 40794269 - 40794431
Alignment:
Q  320 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttccatttagactttttaaaagataaatacgagg 418  Q
    |||| ||||||||||||||||||  |||||||||||||||| ||          ||||||||||||||  ||||| | ||||||||||| |||||| | |    
T  40794269 tcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtttttttttttaaaagaacaatgttttatttaaattttttaaaagacaaatacaaag 40794368  T
Q  419 tgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
     |  ||| |||| ||||||||  |||||||||||||||| ||||||||||||| ||| |||||    
T  40794369 agccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaacctcaaa 40794431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 496
Target Start/End: Original strand, 41911614 - 41911736
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    |||||||||||||| | |||   ||||||||||| |||||| |||||| ||||||| | | ||||| |||| || |||||||||  |||||| |||||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgagga 41911713  T
Q  474 acttcaaatcatcctcccaaaaa 496  Q
    || |||||||| ||| |||||||    
T  41911714 acctcaaatcacccttccaaaaa 41911736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 15480094 - 15480187
Alignment:
Q  382 atgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||| ||||| | |||||||||||||||||| || ||| ||||||||| | ||||| || |||||||||| ||| |||||| ||||||||||    
T  15480094 atgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaac 15480187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 475
Target Start/End: Complemental strand, 19523293 - 19523201
Alignment:
Q  383 tgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| || ||||||||||||||    
T  19523293 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaac 19523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 22648734 - 22648858
Alignment:
Q  375 aagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaa 474  Q
    ||||||||||||| ||||| | |||||||||||||||||| | |||| |||||||||||  |||  ||||||||| ||||||| | ||||| || || ||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtataaataagaaa 22648833  T
Q  475 cttcaaatcatcctcccaaaaaaca 499  Q
    | ||||| || | ||| ||||||||    
T  22648834 cctcaaaccaccttccaaaaaaaca 22648858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 453
Target Start/End: Complemental strand, 7338102 - 7338023
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaat 453  Q
    ||||| |||||||| ||||| | |||||||||||||||||| |||||| ||||||||| | |||||  ||||||||||||    
T  7338102 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 31194608 - 31194706
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | || || || |||||||||| ||| ||||||||||||||    
T  31194608 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 475
Target Start/End: Original strand, 40389539 - 40389634
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||| ||||| | |||||||||||||||||  |||||| ||||||||| | ||||  ||||||||||||| ||| ||||||  |||||||||    
T  40389539 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaac 40389634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 2274994 - 2274892
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||| |||| | |||||||||   ||||| || |||||||||| ||| ||||||||| ||||    
T  2274994 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgagg 2274895  T
Q  473 aac 475  Q
    |||    
T  2274894 aac 2274892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 15639723 - 15639645
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||| |||||||||||| |||||  ||||||||| ||||||  ||||| |||||||||||| ||||||||| ||||||    
T  15639723 ttttttaaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaac 15639645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 381 - 475
Target Start/End: Original strand, 16799331 - 16799425
Alignment:
Q  381 aatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||||| ||||| | ||||||||| |||||||  |||||  ||||||||| | ||||| ||||||||||||| | | |||||||||||||||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaac 16799425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 22986554 - 22986652
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||| |||||||| ||| | | ||||||||||| |||||| | |||| ||||||||| | ||||| || |||||||||| ||| |||||||||||||    
T  22986554 aaaagagcaatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgag 22986652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 36187875 - 36187973
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||| | |||||| ||||| | ||||||||| |||||||| |||||  ||||||||| | ||||| || |||||||||| ||| |||||||||||||    
T  36187875 aaaagagcgatgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 36187973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 27924162 - 27924084
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||||||||||  |||||  ||||||||| | ||||  ||||||| ||||| ||| |||||||||||||||||    
T  27924162 tttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaac 27924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 606258 - 606210
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgt 421  Q
    ||||||||||||||| ||||| | |||||||||||||||||| ||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgt 606210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 7671004 - 7670929
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||||||||||||||  |||||  |||||| |  | ||||| ||||||||||||| ||| ||||||||||||||    
T  7671004 tttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgagg 7670929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 22875122 - 22875060
Alignment:
Q  295 agggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaata 356  Q
    ||||| ||| |||||||| |||||| ||||||||||||||||||||||  | |||||||||||    
T  22875122 agggctgttgctacgaatttggaggctcggttctgtaagtgaaaagagaacagtaataaaata 22875060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 3e-40; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 301 - 497
Target Start/End: Original strand, 21665627 - 21665823
Alignment:
Q  301 gttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagacttt 399  Q
    ||||||||||||||||||| |||| |||||||||||||||||  |||||||||||||||||||||        ||||||||||||||| ||||| | |||    
T  21665627 gttcctacgaatctggagggtcggctctgtaagtgaaaagagacccgtaataaaataaaaatgtattttttt-aaaagaacaatgttctatttaaatttt 21665725  T
Q  400 ttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    |||||||||||||||  ||||| ||||||||||||||||   ||| |||||||||||| |||||||||||||||||  |||| || ||||| ||||||    
T  21665726 ttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgaggaaccacaaaccaccctcctaaaaaa 21665823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 300 - 481
Target Start/End: Complemental strand, 16097185 - 16097003
Alignment:
Q  300 cgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactt 398  Q
    ||||||||||||| |||||| |||| ||||||||||||||| || ||||||||||||||| |||||        ||||||||||||||| ||||| | ||    
T  16097185 cgttcctacgaatttggaggctcggctctgtaagtgaaaagtggcccgtaataaaataaatatgtattttgtttaaaagaacaatgttctatttaaattt 16097086  T
Q  399 tttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
    |||||||||||||||| |||||  |||||||||   ||||| ||||||||||||| ||| || |||||||||||||| |||||    
T  16097085 tttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacctcaaa 16097003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 325 - 497
Target Start/End: Original strand, 13800495 - 13800668
Alignment:
Q  325 tctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgt 424  Q
    ||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||| ||||| | |||||||||||||||||  |||||  ||    
T  13800495 tctgtaagtgaaaagaggttcgtaataaaataaaaatgtatttttttaaaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgt 13800594  T
Q  425 atatatgtgatacactc-aaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    ||||||| ||||||| | |||||||||||||||| |  |||||| ||||||| |||||||| | ||||||||||    
T  13800595 atatatgcgatacacccaaaaggtgaaaatcactactatatacacgaggaacctcaaatcaccttcccaaaaaa 13800668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 320 - 481
Target Start/End: Complemental strand, 38400954 - 38400793
Alignment:
Q  320 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggt 419  Q
    |||| |||||||||||||||||  ||| |||||||||||||  ||        | ||||||||||||| ||||| | |||||||||||||||||| ||||    
T  38400954 tcggctctgtaagtgaaaagagacccgcaataaaataaaaacatatattttttataagaacaatgttctatttaaattttttaaaagataaatacaaggt 38400855  T
Q  420 gttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
    ||  |||||||| |||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  38400854 gtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacctcaaa 38400793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 302 - 497
Target Start/End: Original strand, 24035472 - 24035668
Alignment:
Q  302 ttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttt 400  Q
    |||||||||||| ||| | ||| || |||||||||||||| | ||||||||||||||||| |||        ||||||||||||||| ||||| | ||||    
T  24035472 ttcctacgaatccggatgctcgattttgtaagtgaaaagatgcccgtaataaaataaaaacgtatttcttttaaaagaacaatgttctatttaaattttt 24035571  T
Q  401 taaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    |||||||||||||| |||||  ||||| ||| |||||||  |||||||||||||||| ||| ||||||||||||   |||| || ||||||||||||    
T  24035572 taaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgaggaatcgcaaaccaccctcccaaaaaa 24035668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 293 - 497
Target Start/End: Original strand, 12133954 - 12134163
Alignment:
Q  293 gcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaat---gtannnnnnnnaaaa-gaacaatgttc 387  Q
    |||| ||||| ||||||||||  |||| |||||||||||||||||||||||||||||||||||||| ||    |||        |||| |||||||||||    
T  12133954 gcagagccgtacctacgaatccagaggctcggttctgtaagtgaaaagaggtccgtaataaaataataagaacgtattttttttaaaaagaacaatgttc 12134053  T
Q  388 catttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcc 487  Q
     ||||| |   |||||||||||||||| ||||   ||||||||| ||||||| |||| |||||||||||| |||||||||| |||||| ||||| || ||    
T  12134054 tatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattaggaacctcaaaccaccc 12134153  T
Q  488 tcccaaaaaa 497  Q
    ||||| ||||    
T  12134154 tcccacaaaa 12134163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 500
Target Start/End: Original strand, 28425631 - 28425836
Alignment:
Q  299 ccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnn---aaaagaacaatgttccatttag 394  Q
    ||||||||||||||   |||| ||| || ||||| ||||||||||||||||||||||||||||||||           ||||||||||||||| |||||     
T  28425631 ccgttcctacgaattcagaggctcgtttttgtaaatgaaaagaggtccgtaataaaataaaaatgtatttttttttttaaaagaacaatgttctatttaa 28425730  T
Q  395 actttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaa 494  Q
    |  ||||||||||||||||| |||||| |||||||||   ||||| |||| |||||||||||| || |||| ||||||||| ||||  |  |||||||||    
T  28425731 aaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacctcaagcctccctcccaaa 28425830  T
Q  495 aaacac 500  Q
    ||||||    
T  28425831 aaacac 28425836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 374 - 498
Target Start/End: Original strand, 16227368 - 16227492
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    |||||||||| ||| ||||| | |||||||||||||||||| |||||| |||||||||||||||||  | || ||||||||||| |  ||||||| ||||    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataagga 16227467  T
Q  474 acttcaaatcatcctcccaaaaaac 498  Q
    || ||||| || |||||||||||||    
T  16227468 acctcaaaccaccctcccaaaaaac 16227492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 12337447 - 12337549
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| ||||||  |||||||||| ||||| || |||||||||| ||| ||||||||||||||    
T  12337447 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgagg 12337546  T
Q  473 aac 475  Q
    |||    
T  12337547 aac 12337549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 29939861 - 29939963
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||| ||||||||||| |||||| ||||||||| | ||||| ||||||||||||| ||| ||||||||||||||    
T  29939861 aaaagagcaatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 29939960  T
Q  473 aac 475  Q
    |||    
T  29939961 aac 29939963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 407 - 497
Target Start/End: Complemental strand, 37182739 - 37182649
Alignment:
Q  407 ataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    |||||||| |||||| |||||||||  |||||| |||| |||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacctcaaatcaccctcccaaaaaa 37182649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 374 - 475
Target Start/End: Original strand, 10762565 - 10762666
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    ||||| |||||||| ||||| | |||||||||||||||||  |||||  ||||||||||| ||||| ||||||||||||| ||| |||||||||||||||    
T  10762565 aaagagcaatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgagga 10762664  T
Q  474 ac 475  Q
    ||    
T  10762665 ac 10762666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 475
Target Start/End: Complemental strand, 24410535 - 24410438
Alignment:
Q  378 aacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| |||||||||||||||||    
T  24410535 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 24410438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 9046133 - 9046030
Alignment:
Q  373 aaaagaacaatgttccatttagacttttt-aaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    ||||||||||||||| ||||| | ||||| ||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| |||||||||||||    
T  9046133 aaaagaacaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 9046034  T
Q  472 gaac 475  Q
    ||||    
T  9046033 gaac 9046030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 3155320 - 3155218
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | |||||  | |||||||||| ||| ||||||||||||||    
T  3155320 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagg 3155221  T
Q  473 aac 475  Q
    |||    
T  3155220 aac 3155218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 4505997 - 4505895
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||| ||||| ||| ||||||||||||||    
T  4505997 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagg 4505898  T
Q  473 aac 475  Q
    |||    
T  4505897 aac 4505895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 6965110 - 6965008
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| | |||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  6965110 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 6965011  T
Q  473 aac 475  Q
    |||    
T  6965010 aac 6965008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 11952511 - 11952575
Alignment:
Q  297 ggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaa 360  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||    
T  11952511 ggccgttcctacgaatctgaaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaa 11952575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 495
Target Start/End: Original strand, 7742055 - 7742255
Alignment:
Q  301 gttcctacgaatctggaggt-cggttctgtaagtgaaaagaggtccgtaataaaataaaa----atgtannnnnnnnaaaagaacaatgttccatttaga 395  Q
    ||||||||||||| |||||| |||||||||||||||||||||| |||| |||||||||||    || |         ||||||||||||||| ||||| |    
T  7742055 gttcctacgaatccggaggttcggttctgtaagtgaaaagaggcccgtgataaaataaaaacacatattatttttttaaaagaacaatgttctatttata 7742154  T
Q  396 -ctttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaa 494  Q
      |||||||||||||||||| | ||||  |||||||| | ||||  ||||||||||||  |||  ||||| |||||||||| ||||| ||  ||||||||    
T  7742155 tttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgaggaacctcaaaccactctcccaaa 7742254  T
Q  495 a 495  Q
    |    
T  7742255 a 7742255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 418 - 497
Target Start/End: Original strand, 11952650 - 11952729
Alignment:
Q  418 gtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    |||| |||||||||||||||||||| || ||||||||||| | | ||||||||||||| ||||| || ||||||||||||    
T  11952650 gtgtcgtatatatgtgatacactcatagatgaaaatcactactgcatacatgaggaacctcaaaccaccctcccaaaaaa 11952729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 300 - 455
Target Start/End: Complemental strand, 42029326 - 42029166
Alignment:
Q  300 cgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgta----nnnnnnnnaaaagaacaatgttccatttag 394  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||| |||||||| |||||||||||             |||||||||||||| |||||     
T  42029326 cgttcctaagaatctggaggctcggttttgtaagtgaaaagaggttcgtaataatataaaaatgtatttttttttttttaaagaacaatgttctatttaa 42029227  T
Q  395 actttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatca 455  Q
    | |||||||||||||||||  ||||||  |||| ||||  |||||  ||||||||||||||    
T  42029226 attttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaatca 42029166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 7162887 - 7162785
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||| |||||  ||||||||| | || ||||| |||||||||| ||| ||||||| ||||||    
T  7162887 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgagg 7162788  T
Q  473 aac 475  Q
    |||    
T  7162787 aac 7162785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 476
Target Start/End: Original strand, 27506746 - 27506842
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaact 476  Q
    ||||| || ||||| | |||||||||||||||||  |||||  ||||||||||| ||||| ||||||| ||||| ||| | ||||||||||||||||    
T  27506746 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaact 27506842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 497
Target Start/End: Original strand, 11912757 - 11912880
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    |||||||||||||| ||||| | ||   |||| |||||||| | |||  |||||||||  |||||  ||||| ||||||||||| |||||||||| ||||    
T  11912757 aaagaacaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataagga 11912856  T
Q  474 acttcaaatcatcctcccaaaaaa 497  Q
    || ||||| || ||||||||||||    
T  11912857 acctcaaaccaccctcccaaaaaa 11912880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 26716232 - 26716129
Alignment:
Q  373 aaaagaacaatgttccatttagacttttt-aaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||| |||||||| ||||| | ||||| ||||||||||||  |||||   |||||||| | ||||| ||||||||||||| ||| |||||||||||||    
T  26716232 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 26716133  T
Q  472 gaac 475  Q
    ||||    
T  26716132 gaac 26716129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 44914855 - 44914894
Alignment:
Q  325 tctgtaagtgaaaagaggtccgtaataaaataaaaatgta 364  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44914855 tctgtaagtgaaaagaggtccgtaataaaataaaaatgta 44914894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 414
Target Start/End: Original strand, 22727376 - 22727497
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    ||||||| |||||||||||  ||||| |||   |||||||||||||||||   ||||||||||||||| |||        ||||||||||||||| ||||    
T  22727376 cagggccattcctacgaattcggaggctcgacgctgtaagtgaaaagaggcaagtaataaaataaaaacgtattttttttaaaagaacaatgttctattt 22727475  T
Q  393 agactttttaaaagataaatac 414  Q
    | | ||||||||||||||||||    
T  22727476 aaattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 453
Target Start/End: Complemental strand, 34694131 - 34693998
Alignment:
Q  320 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggt 419  Q
    |||| |||| || |||||||||| |||| ||||||| |||| |||        |||||| |||||||| ||||| | |||||||||||||||||| ||||    
T  34694131 tcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggt 34694032  T
Q  420 gttgtatatatgtgatacactcaaaggtgaaaat 453  Q
    |  ||||||||||| ||||| || |||| |||||    
T  34694031 gccgtatatatgtggtacacccagaggtcaaaat 34693998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 453
Target Start/End: Complemental strand, 34716543 - 34716410
Alignment:
Q  320 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggt 419  Q
    |||| |||| || |||||||||| |||| ||||||| |||| |||        |||||| |||||||| ||||| | |||||||||||||||||| ||||    
T  34716543 tcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggt 34716444  T
Q  420 gttgtatatatgtgatacactcaaaggtgaaaat 453  Q
    |  ||||||||||| ||||| || |||| |||||    
T  34716443 gccgtatatatgtggtacacccagaggtcaaaat 34716410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 450
Target Start/End: Complemental strand, 40636241 - 40636164
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaa 450  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||| ||||||||| | ||||| || |||||||    
T  40636241 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 8907086 - 8907176
Alignment:
Q  381 aatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    ||||||| ||||| | |||||||||||||||||| ||| |  ||||||||| | ||||| || |||| ||||| ||| |||||||||||||    
T  8907086 aatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 8907176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 475
Target Start/End: Complemental strand, 3953100 - 3953007
Alignment:
Q  382 atgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||| ||||| | |||||||||||||||||| |||||  ||||| ||| | ||||| || |||||||||| | | |||||| ||||||||||    
T  3953100 atgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaac 3953007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 12694855 - 12694794
Alignment:
Q  301 gttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaat 361  Q
    |||| |||||||| ||||| |||| |||||||||||||||||  ||||||||||||||||||    
T  12694855 gttcttacgaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaat 12694794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 37182821 - 37182760
Alignment:
Q  300 cgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaa 360  Q
    |||||||| ||||| ||||| |||| |||||||||||||||||  |||||||||||||||||    
T  37182821 cgttcctaagaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaa 37182760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 16227285 - 16227351
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaa 360  Q
    |||||||||||||||||||  ||||| || |||||||||||||||||| | || ||||||||||||||    
T  16227285 cagggccgttcctacgaattcggaggctcagttctgtaagtgaaaaga-gaccttaataaaataaaaa 16227351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 22727530 - 22727598
Alignment:
Q  402 aaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatga 470  Q
    ||||||||||||| | |||  ||||||||| | ||||| |||| |||||||||||| || |||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 290 - 497
Target Start/End: Original strand, 173 - 381
Alignment:
Q  290 acagcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttcc 388  Q
    ||||||||||||||| | | ||||  |||| |||| |||| ||||||| ||||| || ||||||||||||||||||        |||||||||||||||     
T  173 acagcagggccgttctttcaaatccagaggctcggctctgcaagtgaatagaggcccataataaaataaaaatgtatttttattaaaagaacaatgttct 272  T
Q  389 atttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcct 488  Q
    ||||| | |||||||||||||||||| |||||| ||||||||| | ||||| |||| |||||||||||| |||||||||||| |||| ||||| || |||    
T  273 atttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatgaacctcaaaccaccct 372  T
Q  489 cccaaaaaa 497  Q
    |||||||||    
T  373 cccaaaaaa 381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 3e-37; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 292 - 506
Target Start/End: Original strand, 2477502 - 2477717
Alignment:
Q  292 agcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccat 390  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| | ||||        ||| ||||||||||| ||    
T  2477502 agcagcgccgttcctacaaatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtattttttt-aaacgaacaatgttcaat 2477600  T
Q  391 ttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcc 490  Q
    ||| | |||||||||||||||||| |||||   |||||||| |||||||  ||| |||||||||||| ||||||||||||||||| ||||| || |||||    
T  2477601 ttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcc 2477700  T
Q  491 ca-aaaaacacctacct 506  Q
    || ||||||||| ||||    
T  2477701 cagaaaaacacccacct 2477717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 24711007 - 24711100
Alignment:
Q  382 atgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||| ||||| | |||||||||||||||||| |||||  ||||||||||| |||||||| |||||||||| ||| |||||||||||||||||    
T  24711007 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaac 24711100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 377 - 496
Target Start/End: Complemental strand, 6159541 - 6159422
Alignment:
Q  377 gaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaact 476  Q
    ||||||||||| ||||| | |||||||||||||||||| | |||| ||||||||| | |||| ||||||||| |||||||| ||||||| || ||||||     
T  6159541 gaacaatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacc 6159442  T
Q  477 tcaaatcatcctcccaaaaa 496  Q
    ||||| || ||| |||||||    
T  6159441 tcaaaccacccttccaaaaa 6159422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 28075883 - 28075788
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||    
T  28075883 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaac 28075788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 13727398 - 13727500
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  13727398 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 13727497  T
Q  473 aac 475  Q
    |||    
T  13727498 aac 13727500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 20711719 - 20711821
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| ||||||||||||||    
T  20711719 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 20711818  T
Q  473 aac 475  Q
    |||    
T  20711819 aac 20711821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 21479601 - 21479499
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  21479601 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 21479502  T
Q  473 aac 475  Q
    |||    
T  21479501 aac 21479499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 497
Target Start/End: Complemental strand, 20611975 - 20611773
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    ||||| |||||||||||||  ||||| |||| |||||||||||||||||| || ||| |||||||||| ||         || | ||  |||||| | ||    
T  20611975 cagggtcgttcctacgaattcggaggctcggctctgtaagtgaaaagaggcccataaaaaaataaaaacgtttttttttcaagataa--atgttctactt 20611878  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctccca 492  Q
    | | |||||||| ||||||||| |||||| ||||||||  || |||  ||||||||||||||||| ||||||||||||||||| |||||  | |||||||    
T  20611877 aaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaactaccctccca 20611778  T
Q  493 aaaaa 497  Q
    |||||    
T  20611777 aaaaa 20611773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 21183698 - 21183798
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaa 496  Q
    |||||||||||||||||| | ||   ||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||||| || || ||||||||    
T  21183698 tttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacctcaaaccacccacccaaaaa 21183797  T
Q  497 a 497  Q
    |    
T  21183798 a 21183798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 476
Target Start/End: Complemental strand, 21280652 - 21280549
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||| ||||| ||| ||||||||||||||    
T  21280652 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagg 21280553  T
Q  473 aact 476  Q
    ||||    
T  21280552 aact 21280549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 27788687 - 27788789
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||| ||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| ||||||||||||||    
T  27788687 aaaagagcaattttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 27788786  T
Q  473 aac 475  Q
    |||    
T  27788787 aac 27788789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 475
Target Start/End: Complemental strand, 33774216 - 33774122
Alignment:
Q  381 aatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| |||| |||||||| ||| |||||||||||||||||    
T  33774216 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaac 33774122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 4037031 - 4036931
Alignment:
Q  397 tttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaa 496  Q
    ||||||| |||||||||| |||||  |||||||| || ||||| ||||||| || |||||| ||||||| ||||||||||||||| || ||||| |||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaacttcaaaccaccctccaaaaaa 4036932  T
Q  497 a 497  Q
    |    
T  4036931 a 4036931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 472
Target Start/End: Original strand, 1155849 - 1155947
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||| |||||||| ||||| | |||||||||||||||||| ||||||  |||||||| | ||||  || |||||||||| ||| ||||||||||||||    
T  1155849 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 19737691 - 19737793
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | ||||| |||||||||||| |||||  ||||||||| | |||||  | |||||||||| ||| ||||||||||||||    
T  19737691 aaaagagcaatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagg 19737790  T
Q  473 aac 475  Q
    |||    
T  19737791 aac 19737793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 17354054 - 17353959
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||||| ||||| | |||||||||||||||||  |||||| ||||||||| | ||||| |||| |||||||| |||  ||||||||||| ||||    
T  17354054 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaac 17353959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 457
Target Start/End: Complemental strand, 30121868 - 30121785
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcact 457  Q
    |||||||||||||  ||||| | ||||||||| |||||||| ||||||  |||||||| ||||||  |||||||||||||||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcact 30121785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 34397964 - 34397862
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | |||||  |||||| ||||| |||  |||| ||||||||    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgagg 34397865  T
Q  473 aac 475  Q
    |||    
T  34397864 aac 34397862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 474
Target Start/End: Complemental strand, 27994814 - 27994775
Alignment:
Q  435 tacactcaaaggtgaaaatcactgccgtatacatgaggaa 474  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  27994814 tacactcaaaggtgaaaatcactaccgtatacatgaggaa 27994775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 21183615 - 21183684
Alignment:
Q  293 gcagggccgttcctacgaatctggaggtc-ggttctgtaagtgaaaagaggtccgtaataaaataaaaat 361  Q
    |||||||| || |||| ||| |||||||  |||| |||||||||||||||||| ||||||||||||||||    
T  21183615 gcagggccatttctacaaatttggaggtttggttttgtaagtgaaaagaggtcagtaataaaataaaaat 21183684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 373 - 453
Target Start/End: Original strand, 27314177 - 27314258
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaa-gataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaat 453  Q
    |||||| |||||||| ||||| | ||||||||| ||||||||| |||||  ||||||||| | |||||||| ||||||||||    
T  27314177 aaaagagcaatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaat 27314258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 30832532 - 30832625
Alignment:
Q  382 atgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||| ||||| | ||||||||| |||||||| || ||  ||||||||||| ||||| || || ||||||| ||| |||||| ||||||||||    
T  30832532 atgttctatttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaac 30832625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 300 - 481
Target Start/End: Complemental strand, 1532 - 1350
Alignment:
Q  300 cgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactt 398  Q
    |||||||||||||||| ||| || | |||||||||||||||| ||||||||||||||||||| |||        ||||||| ||||||| ||||| | ||    
T  1532 cgttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaaatt 1433  T
Q  399 tttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
    |||||||||||||||  ||||| ||||||||||  |||||| |||| ||||||||||||  |||||||||||||||| |||||    
T  1432 tttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaa 1350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 301 - 481
Target Start/End: Original strand, 206417 - 206596
Alignment:
Q  301 gttcctacgaatctggaggtcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttt 400  Q
    |||||||||||||  |||| ||| |||||||||||||||||||  |||||||||||||||||||         |||||| ||||||| ||||| | |||     
T  206417 gttcctacgaatcctgagg-cggctctgtaagtgaaaagaggtttgtaataaaataaaaatgtatttttttttaaagaagaatgttctatttaaattttg 206515  T
Q  401 taaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
    |||||||||||||| |||||| ||||||||| | ||||| ||| ||||||||||||| ||||||||||||||||| |||||    
T  206516 taaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctcaaa 206596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 182499 - 182436
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaata 356  Q
    ||||||||||||||||||| | |||| ||||| ||| |||||||| |||| |||||||||||||    
T  182499 cagggccgttcctacgaatttagaggctcggtgctgaaagtgaaatgaggcccgtaataaaata 182436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 300 - 481
Target Start/End: Complemental strand, 39106 - 38921
Alignment:
Q  300 cgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaa---aagaacaatgttccatttaga 395  Q
    |||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||              || |||||||||| ||||| |    
T  39106 cgttcctacgaatctggaggctcgattctgtaagtaaaaagaggtccgtaataaaataaaaacgtttttttttttttttaaaaacaatgttctatttaaa 39007  T
Q  396 ctttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaa 481  Q
     |||||||||||||||||| |||||| ||||||||| ||||||| |||| |||||||||||| ||||||| ||||||||| |||||    
T  39006 ttttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacctcaaa 38921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 6e-29; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 301 - 497
Target Start/End: Complemental strand, 25855601 - 25855405
Alignment:
Q  301 gttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagacttt 399  Q
    |||||| || ||||||||| |||||| ||||| |||||| ||| |||||||||||||||||||||         |||||||||||||| ||||| | |||    
T  25855601 gttcctgcgcatctggaggctcggttatgtaaatgaaaaaaggcccgtaataaaataaaaatgtatgtttttttaaagaacaatgttctatttaaatttt 25855502  T
Q  400 ttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    ||||||||||| ||| |||||| ||||||||||  | ||| ||||| ||||||||||| ||||||||| || |||| ||||| || ||||||||||||    
T  25855501 ttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaagaacctcaaaccaccctcccaaaaaa 25855405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 294 - 497
Target Start/End: Complemental strand, 49393275 - 49393074
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattt 392  Q
    |||| ||||||||||||||| ||||| |||| | |||||||||||| ||   ||||||||||||||||||||         ||||||||||||||  |||    
T  49393275 caggaccgttcctacgaatccggaggctcggct-tgtaagtgaaaaaagactcgtaataaaataaaaatgtatttttttttaaagaacaatgttctcttt 49393177  T
Q  393 agactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctccca 492  Q
    | | |||||||||||||||||| ||| || ||||||||||| ||||| ||||||| ||||| ||| |||||||||||| |||| |||||||| | |||||    
T  49393176 aaattttttaaaagataaatacaaggcgtcgtatatatgtg-tacacccaaaggtaaaaattactaccgtatacatga-gaacctcaaatcaccatccca 49393079  T
Q  493 aaaaa 497  Q
    |||||    
T  49393078 aaaaa 49393074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 497
Target Start/End: Complemental strand, 26279694 - 26279523
Alignment:
Q  327 tgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtat 426  Q
    ||||||||||||||||||| || ||||||||||| |||        ||||||||||||||| ||||| | |||||||||||||||||  |||||| ||||    
T  26279694 tgtaagtgaaaagaggtccatagtaaaataaaaacgtattttttt-aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtat 26279596  T
Q  427 atatgtgatacactcaaaggtgaaaatcact--gccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    |||||  |||||| ||||| |||||||||||   |  |||||||||||||| ||||| || ||||||||||||    
T  26279595 atatgcaatacacccaaagatgaaaatcactacacattatacatgaggaacctcaaaccaccctcccaaaaaa 26279523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 299 - 453
Target Start/End: Original strand, 32319081 - 32319234
Alignment:
Q  299 ccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagact 397  Q
    |||||||| | ||| |||||| || |||||||||||||||| ||||| |||||||||||||||||||         |||||| ||||||| ||||| | |    
T  32319081 ccgttcctgcaaatatggaggctcagttctgtaagtgaaaataggtctgtaataaaataaaaatgtaagttttt--aaagaataatgttctatttaaatt 32319178  T
Q  398 ttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaat 453  Q
    ||||||||||||||||| | |||||||||||||| | ||||| |||||||||||||    
T  32319179 ttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaat 32319234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 292 - 497
Target Start/End: Original strand, 54574740 - 54574950
Alignment:
Q  292 agcagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnn----aaaagaacaatgtt 386  Q
    |||| ||||||||||||||||||||||| ||||| ||| |||||||| |||  ||||||||||||||| |||||            ||||||||||||||    
T  54574740 agcatggccgttcctacgaatctggaggctcggtgctggaagtgaaatgagacccgtaataaaataaagatgtattttttttttttaaaagaacaatgtt 54574839  T
Q  387 ccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatc 486  Q
    | ||||| | |||| |||| |||||||| ||||   ||||||||| | ||||| |||| || ||||||||| || |||||||||||||| ||||| |  |    
T  54574840 ctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacctcaaaccgcc 54574939  T
Q  487 ctcccaaaaaa 497  Q
    |||||||||||    
T  54574940 ctcccaaaaaa 54574950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 373 - 481
Target Start/End: Complemental strand, 8420433 - 8420325
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||| ||||||| ||||| | |||||||||||||||||| |||||  ||||||||||  ||||| |||| |||||||||||||||||||| | ||||    
T  8420433 aaaagaataatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgagg 8420334  T
Q  473 aacttcaaa 481  Q
    ||| |||||    
T  8420333 aacctcaaa 8420325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 330 - 506
Target Start/End: Original strand, 28689317 - 28689493
Alignment:
Q  330 aagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatata 429  Q
    |||||||||||||  ||||||||||||||||  ||        |||| || ||||||| ||||| | |||  ||||||||||||| |||||  |||||||    
T  28689317 aagtgaaaagaggctcgtaataaaataaaaagatattttttttaaaaaaagaatgttctatttaaattttcaaaaagataaatacaaggtgccgtatata 28689416  T
Q  430 tgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaacacctacct 506  Q
    || |||| |  ||||||||||||||||||||||||||||||| ||  |||||  | |||||||||||||||| ||||    
T  28689417 tgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaatctcaaactaccctcccaaaaaacacccacct 28689493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 320 - 475
Target Start/End: Original strand, 8073284 - 8073439
Alignment:
Q  320 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccatttagactttttaaaagataaatacgaggt 419  Q
    |||| |||| || |||||||||||| || ||||||| |||| |||        ||||||  ||||||| ||||| | |||||||||||||||||| ||||    
T  8073284 tcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtaatgttctatttatattttttaaaagataaatacaaggt 8073383  T
Q  420 gttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    || ||||||||| | ||||| |||| |||||||| ||| |||||||||||||||||    
T  8073384 gtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaac 8073439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 373 - 476
Target Start/End: Complemental strand, 37168474 - 37168371
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||| |||||||||| ||||| | |||||||||||||||||  |||||  ||||||||||| || || ||||||||||||| ||| ||||||||||||||    
T  37168474 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgagg 37168375  T
Q  473 aact 476  Q
    ||||    
T  37168374 aact 37168371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 21582878 - 21582776
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||||||  ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  21582878 aaaagaacaatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 21582779  T
Q  473 aac 475  Q
    |||    
T  21582778 aac 21582776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 54619202 - 54619304
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| ||| ||||||||||||||    
T  54619202 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 54619301  T
Q  473 aac 475  Q
    |||    
T  54619302 aac 54619304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 475
Target Start/End: Complemental strand, 47467782 - 47467689
Alignment:
Q  382 atgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    |||||| ||||| | |||||||||||||||||| |||||  ||||||||| ||||||| || |||||||||| ||| |||||||||||||||||    
T  47467782 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaac 47467689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 3953895 - 3953997
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||| |   ||||||||||||||    
T  3953895 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgagg 3953994  T
Q  473 aac 475  Q
    |||    
T  3953995 aac 3953997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 34290635 - 34290737
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||| |||||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| ||| ||||||| ||||||    
T  34290635 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgagg 34290734  T
Q  473 aac 475  Q
    |||    
T  34290735 aac 34290737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 42098908 - 42098806
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||| |||||  ||||||||| | || ||||| |||||||||| ||| ||||||||||||||    
T  42098908 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgagg 42098809  T
Q  473 aac 475  Q
    |||    
T  42098808 aac 42098806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 43207237 - 43207338
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | |||| |||||||||||||| ||| ||||||||||||||    
T  43207237 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatgagg 43207335  T
Q  473 aac 475  Q
    |||    
T  43207336 aac 43207338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 431
Target Start/End: Original strand, 23641240 - 23641375
Alignment:
Q  298 gccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgta-nnnnnnnnaaaagaacaatgttccatttaga 395  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||  |||| |||||||||||| |||         ||||||||||  ||| ||||| |    
T  23641240 gccgttcctacgaatctggaggctcggttctgtaggtgaaaagagacccgtgataaaataaaaacgtatttttttttaaaagaacaacattctatttata 23641339  T
Q  396 ctttttaaaagataaatacgaggtgttgtatatatg 431  Q
     |||||||||||||||||| | |||| |||||||||    
T  23641340 ttttttaaaagataaatacaatgtgtcgtatatatg 23641375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 475
Target Start/End: Complemental strand, 44708576 - 44708482
Alignment:
Q  381 aatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||||| ||||| | |||||||||||||||||  |||||  ||||||||  | ||||| ||||||||||||| ||| |||||||||||||||||    
T  44708576 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaac 44708482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 53149313 - 53149415
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| | |||||| ||||| | |||||||||||||||||| |||||  ||||||||| | |||||||| || | ||||| ||| ||||||||||||||    
T  53149313 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgagg 53149412  T
Q  473 aac 475  Q
    |||    
T  53149413 aac 53149415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 471
Target Start/End: Original strand, 53506883 - 53506981
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||| |||||||||| ||||| | |||||||||||||||||  ||||   ||||||||| | ||||| ||||||||||||| ||| |||||||||||||    
T  53506883 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 53506981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 474
Target Start/End: Original strand, 38681092 - 38681193
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  |||| |||| | ||||  || |||||||||| ||| ||||||||||||||    
T  38681092 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 38681191  T
Q  473 aa 474  Q
    ||    
T  38681192 aa 38681193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 474
Target Start/End: Complemental strand, 18372590 - 18372485
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatat----gtgatacactcaaaggtgaaaatcactgccgtatacat 468  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||| ||||||||    | | ||||| || |||||||||| ||| ||||||||||    
T  18372590 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacat 18372491  T
Q  469 gaggaa 474  Q
    ||||||    
T  18372490 gaggaa 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 423 - 499
Target Start/End: Complemental strand, 29598163 - 29598088
Alignment:
Q  423 gtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaaca 499  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||  ||||| || ||||| ||||||||    
T  29598163 gtatatatgtgatacactcaaagatgaaa-tcactaccgtatacatgaggaatctcaaaccagcctccaaaaaaaca 29598088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 42453511 - 42453435
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtga 449  Q
    ||||||||||||||| ||||| | |||||||||||||||||| ||||||  |||||||| |||||||  ||||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 42453435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 506
Target Start/End: Complemental strand, 52374810 - 52374631
Alignment:
Q  327 tgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgta 425  Q
    ||||||||||||||  |||||||||||||||||| |||         ||||||||||||||| ||||| | |||||   | |||||||| | |||| |||    
T  52374810 tgtaagtgaaaagaaatccgtaataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgta 52374711  T
Q  426 tatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaacacctacct 506  Q
    || ||| ||||||   ||||| |||||||||| |||||||||||| |||| ||| | || |||||||||||||||| ||||    
T  52374710 tagatgcgatacatctaaaggagaaaatcactaccgtatacatgaagaacctcatacca-cctcccaaaaaacacccacct 52374631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 481
Target Start/End: Complemental strand, 790042 - 789935
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    |||||||||| ||| ||||| | ||||||||  |||||||| ||||||  |||||||||  ||||| ||||||| ||||||||  || ||||||||||||    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgagga 789943  T
Q  474 acttcaaa 481  Q
    || |||||    
T  789942 acctcaaa 789935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 475
Target Start/End: Original strand, 50939239 - 50939334
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaac 475  Q
    ||||| || ||||| | |||||||||||||||||  |||||  |||||||| || ||||| ||||||| ||||| ||| |||||||||||||||||    
T  50939239 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaac 50939334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 468
Target Start/End: Original strand, 54407157 - 54407252
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacat 468  Q
    |||| |||||||||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||  ||||||||||||| ||| ||||||||||    
T  54407157 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 9878686 - 9878788
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| |||| ||| ||||| | |||||||||||||||||  |||||  ||||||||| | ||||| ||||||||||||| |||  ||||||||| |||    
T  9878686 aaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacataagg 9878785  T
Q  473 aac 475  Q
    |||    
T  9878786 aac 9878788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 36179476 - 36179544
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaat 361  Q
    |||||||||||||||||||| ||||| | ||| |  |||||||||||||| ||||||||||||||||||    
T  36179476 cagggccgttcctacgaatccggaggcttggtcccataagtgaaaagaggcccgtaataaaataaaaat 36179544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 471
Target Start/End: Original strand, 27078575 - 27078666
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||||| ||||| | |||||||||||||||||| | |||  ||||||||| | || || || |||||||||| ||| |||||||||||||    
T  27078575 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27078666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 471
Target Start/End: Original strand, 27084372 - 27084463
Alignment:
Q  380 caatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgag 471  Q
    |||||||| ||||| | |||||||||||||||||| | |||  ||||||||| | || || || |||||||||| ||| |||||||||||||    
T  27084372 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27084463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 452
Target Start/End: Original strand, 36716024 - 36716103
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaa 452  Q
    |||||| |||||||| ||||| | |||||||||||||||||| |||||  ||||||||| | ||||| || |||||||||    
T  36716024 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaa 36716103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 472
Target Start/End: Complemental strand, 36606065 - 36605973
Alignment:
Q  380 caatgttccatttagactttttaaaa-gataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||||| ||||| | ||||||||| ||||||||| |||||  ||||||||| | ||||| || || ||||||| ||| ||||||||||||||    
T  36606065 caatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 497
Target Start/End: Complemental strand, 52973436 - 52973379
Alignment:
Q  440 tcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    |||||| ||||||||||| | |||| ||||| |||||||||| || ||||||||||||    
T  52973436 tcaaagatgaaaatcactactgtatgcatgatgaacttcaaaccaccctcccaaaaaa 52973379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 52973501 - 52973437
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataa 357  Q
    |||| |||||||||||||| | |||| ||| ||||||||| ||||||||| || |||||||||||    
T  52973501 caggaccgttcctacgaatttagaggctcgattctgtaagagaaaagaggcccataataaaataa 52973437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 379 - 504
Target Start/End: Original strand, 173515 - 173641
Alignment:
Q  379 acaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttc 478  Q
    ||||||||| ||||| | |||||||||||||||||| ||||   ||||||||| ||||||| ||||||| ||||||||| |||||||| |||||||| ||    
T  173515 acaatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctc 173614  T
Q  479 aaatcatcctccca-aaaaacacctac 504  Q
    ||| |||||||||| ||||||||||||    
T  173615 aaaccatcctcccataaaaacacctac 173641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 106642 - 106540
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    ||||||||||||||| ||||| | |||||||||||||||||  |||||| ||||||||| | ||||| ||||||||||||| ||| ||||||||||||||    
T  106642 aaaagaacaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 106543  T
Q  473 aac 475  Q
    |||    
T  106542 aac 106540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 374 - 499
Target Start/End: Original strand, 23993 - 24118
Alignment:
Q  374 aaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagga 473  Q
    |||||||||| ||| ||||| | |||||||||||||||||| |||||| ||||||||| | ||||| |||| |||||||||| | |||||| ||| ||||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataagga 24092  T
Q  474 acttcaaatcatcctcccaaaaaaca 499  Q
    |  ||||| || ||||||||||||||    
T  24093 atctcaaaccaccctcccaaaaaaca 24118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 23919 - 23968
Alignment:
Q  294 cagggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagagg 342  Q
    |||| |||||||||||||| |||||| |||||||| ||||||||||||||    
T  23919 caggaccgttcctacgaatttggaggctcggttctctaagtgaaaagagg 23968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 497
Target Start/End: Complemental strand, 40257 - 40065
Alignment:
Q  309 gaatctggaggt-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaa-gaacaatgttccatttagacttttt--aaa 404  Q
    |||||||||||| | | ||||||||||||||||||| ||||||||||||||||||||        |||| ||||||||||| |||||   |||||  |||    
T  40257 gaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctatttaatttttttttaaa 40158  T
Q  405 agataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    |||||||||| |||||  |||| |||||  ||||| | ||||||||||||||   |||||||||||| ||| ||||| || | ||||||||||    
T  40157 agataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctcaaaccaccgtcccaaaaaa 40065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 497
Target Start/End: Complemental strand, 138317 - 138125
Alignment:
Q  309 gaatctggaggt-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaa-gaacaatgttccatttagacttttt--aaa 404  Q
    |||||||||||| | | ||||||||||||||||||| ||||||||||||||||||||        |||| ||||||||||| |||||   |||||  |||    
T  138317 gaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctatttaatttttttttaaa 138218  T
Q  405 agataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgaggaacttcaaatcatcctcccaaaaaa 497  Q
    |||||||||| |||||  |||| |||||  ||||| | ||||||||||||||   |||||||||||| ||| ||||| || | ||||||||||    
T  138217 agataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctcaaaccaccgtcccaaaaaa 138125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 1447 - 1345
Alignment:
Q  373 aaaagaacaatgttccatttagactttttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatcactgccgtatacatgagg 472  Q
    |||||| || ||||| ||||| | |||||||||||||||||| || ||  ||||||||| | ||||| || || ||||||| ||| ||||||||||||||    
T  1447 aaaagagcactgttctatttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagg 1348  T
Q  473 aac 475  Q
    |||    
T  1347 aac 1345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 351360 - 351414
Alignment:
Q  400 ttaaaagataaatacgaggtgttgtatatatgtgatacactcaaaggtgaaaatc 454  Q
    ||||||||||||||| |||||| ||||||||||  ||||| ||||||||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatc 351414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 351255 - 351324
Alignment:
Q  295 agggccgttcctacgaatctggagg-tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgt 363  Q
    ||||||||||| || |||||||||| || | |||||| ||||||| | | ||||||||||||||||||||    
T  351255 agggccgttccgacaaatctggaggctcagctctgtatgtgaaaaaatgcccgtaataaaataaaaatgt 351324  T

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Target: scaffold0902 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0902
Description:

Target: scaffold0902; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 4409 - 4482
Alignment:
Q  320 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttccattta 393  Q
    |||| |||| ||||||| ||||| |||||||||||||||||||||        ||||||||||||||| |||||    
T  4409 tcggctctgcaagtgaatagaggcccgtaataaaataaaaatgtatttttattaaaagaacaatgttctattta 4482  T

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