View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1484-Insertion-41 (Length: 91)

Name: NF1484-Insertion-41
Description: NF1484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1484-Insertion-41
NF1484-Insertion-41
[»] chr2 (48 HSPs)
chr2 (10-79)||(40055468-40055537)
chr2 (32-90)||(14456524-14456582)
chr2 (46-88)||(43618597-43618639)
chr2 (28-88)||(25184819-25184879)
chr2 (46-90)||(40055399-40055443)
chr2 (46-86)||(40221137-40221177)
chr2 (32-87)||(29600785-29600840)
chr2 (33-88)||(41183218-41183273)
chr2 (46-84)||(2983428-2983466)
chr2 (23-87)||(9660039-9660103)
chr2 (46-90)||(24541758-24541802)
chr2 (32-88)||(28420210-28420266)
chr2 (32-88)||(30802064-30802120)
chr2 (32-88)||(39489959-39490015)
chr2 (46-89)||(17911196-17911239)
chr2 (34-85)||(27276369-27276420)
chr2 (58-89)||(43258752-43258783)
chr2 (32-87)||(43328964-43329019)
chr2 (46-88)||(4286708-4286750)
chr2 (34-88)||(18000256-18000310)
chr2 (46-88)||(26543996-26544038)
chr2 (46-84)||(31974254-31974292)
chr2 (34-88)||(44100793-44100847)
chr2 (33-86)||(19846909-19846962)
chr2 (46-79)||(28472090-28472123)
chr2 (46-87)||(29407894-29407935)
chr2 (57-90)||(31568600-31568633)
chr2 (46-87)||(33222641-33222682)
chr2 (32-89)||(35490703-35490760)
chr2 (46-79)||(41565351-41565384)
chr2 (32-84)||(4015099-4015151)
chr2 (32-84)||(6233571-6233623)
chr2 (32-84)||(10425812-10425864)
chr2 (58-90)||(15488165-15488197)
chr2 (53-85)||(23347342-23347374)
chr2 (45-85)||(25964838-25964878)
chr2 (32-84)||(36510849-36510901)
chr2 (58-89)||(2648821-2648852)
chr2 (32-87)||(9088737-9088792)
chr2 (46-85)||(17424159-17424198)
chr2 (33-88)||(22003395-22003450)
chr2 (53-84)||(24754038-24754069)
chr2 (30-81)||(29397941-29397992)
chr2 (46-89)||(34921766-34921809)
chr2 (32-87)||(38779636-38779691)
chr2 (46-89)||(41497495-41497538)
chr2 (46-85)||(43982226-43982265)
chr2 (46-89)||(45475463-45475506)
[»] chr6 (23 HSPs)
chr6 (33-91)||(31501641-31501699)
chr6 (33-90)||(31496256-31496313)
chr6 (32-90)||(17596963-17597021)
chr6 (44-90)||(26184611-26184657)
chr6 (36-89)||(18001236-18001289)
chr6 (32-88)||(13164253-13164309)
chr6 (46-89)||(9048098-9048141)
chr6 (46-89)||(9049091-9049134)
chr6 (46-88)||(27616739-27616781)
chr6 (30-75)||(14011754-14011799)
chr6 (32-85)||(14012368-14012421)
chr6 (33-90)||(31480384-31480441)
chr6 (32-88)||(13382653-13382709)
chr6 (32-88)||(26351089-26351145)
chr6 (32-88)||(26712216-26712272)
chr6 (33-85)||(31771735-31771787)
chr6 (32-79)||(3380803-3380850)
chr6 (46-85)||(6204854-6204893)
chr6 (46-89)||(7361214-7361257)
chr6 (48-79)||(7911661-7911692)
chr6 (46-85)||(11691821-11691860)
chr6 (46-85)||(22305135-22305174)
chr6 (46-89)||(23958913-23958956)
[»] chr4 (47 HSPs)
chr4 (46-90)||(48578163-48578207)
chr4 (32-87)||(12376010-12376065)
chr4 (32-87)||(36480533-36480588)
chr4 (46-88)||(26791673-26791715)
chr4 (46-84)||(37022068-37022106)
chr4 (23-88)||(44051076-44051141)
chr4 (32-88)||(14201523-14201579)
chr4 (46-90)||(33409545-33409589)
chr4 (46-90)||(33410236-33410280)
chr4 (32-88)||(46253507-46253563)
chr4 (32-88)||(56565781-56565837)
chr4 (32-87)||(1736084-1736139)
chr4 (46-89)||(11494566-11494609)
chr4 (32-87)||(28322113-28322168)
chr4 (44-87)||(29700307-29700350)
chr4 (32-87)||(40240366-40240421)
chr4 (46-89)||(44561337-44561380)
chr4 (46-84)||(10729431-10729469)
chr4 (46-84)||(10943200-10943238)
chr4 (46-88)||(14297169-14297211)
chr4 (46-88)||(14315418-14315460)
chr4 (46-88)||(41933629-41933671)
chr4 (33-87)||(46169195-46169249)
chr4 (32-85)||(15995749-15995802)
chr4 (32-85)||(19069214-19069267)
chr4 (46-87)||(20208535-20208576)
chr4 (36-88)||(8111412-8111464)
chr4 (32-84)||(14200589-14200641)
chr4 (32-88)||(37563273-37563329)
chr4 (32-88)||(39773428-39773484)
chr4 (58-90)||(40334493-40334525)
chr4 (32-88)||(40832667-40832723)
chr4 (32-84)||(40833603-40833655)
chr4 (35-87)||(43176624-43176676)
chr4 (32-84)||(46254441-46254493)
chr4 (32-88)||(54634008-54634064)
chr4 (46-89)||(958601-958644)
chr4 (46-85)||(6178117-6178156)
chr4 (32-87)||(9655902-9655957)
chr4 (46-85)||(9890021-9890060)
chr4 (46-89)||(18884511-18884554)
chr4 (46-85)||(21018011-21018050)
chr4 (33-84)||(23220706-23220757)
chr4 (32-87)||(28157603-28157658)
chr4 (46-89)||(33383828-33383871)
chr4 (46-85)||(49094111-49094150)
chr4 (46-85)||(55793947-55793986)
[»] scaffold0341 (1 HSPs)
scaffold0341 (46-89)||(18064-18107)
[»] chr3 (53 HSPs)
chr3 (32-87)||(21343487-21343542)
chr3 (33-90)||(45507391-45507448)
chr3 (32-87)||(32744145-32744200)
chr3 (46-88)||(34712257-34712299)
chr3 (46-87)||(6144305-6144346)
chr3 (23-88)||(6489353-6489418)
chr3 (44-89)||(34648209-34648254)
chr3 (46-87)||(34712766-34712807)
chr3 (32-88)||(11248578-11248634)
chr3 (46-82)||(50604427-50604463)
chr3 (33-88)||(2645480-2645535)
chr3 (32-87)||(11269333-11269388)
chr3 (32-87)||(19341069-19341124)
chr3 (46-85)||(19341601-19341640)
chr3 (46-89)||(30839167-30839210)
chr3 (32-87)||(40798957-40799012)
chr3 (46-89)||(41803021-41803064)
chr3 (46-88)||(1294084-1294126)
chr3 (46-88)||(8156532-8156574)
chr3 (46-88)||(19440280-19440322)
chr3 (46-88)||(49144463-49144505)
chr3 (32-85)||(2743425-2743478)
chr3 (32-85)||(4002498-4002551)
chr3 (46-87)||(6143696-6143737)
chr3 (32-85)||(36812864-36812917)
chr3 (46-87)||(41579731-41579772)
chr3 (46-79)||(45101851-45101884)
chr3 (44-89)||(46344960-46345005)
chr3 (32-84)||(28816994-28817046)
chr3 (32-88)||(34542177-34542233)
chr3 (32-84)||(34543129-34543181)
chr3 (32-84)||(40798278-40798330)
chr3 (32-88)||(41844357-41844413)
chr3 (46-90)||(51326002-51326046)
chr3 (46-85)||(2647706-2647745)
chr3 (32-83)||(11249517-11249568)
chr3 (33-84)||(12897852-12897903)
chr3 (46-89)||(14043905-14043948)
chr3 (32-87)||(19988626-19988681)
chr3 (33-84)||(27739561-27739612)
chr3 (54-89)||(29918356-29918391)
chr3 (54-89)||(29967509-29967544)
chr3 (54-89)||(30256018-30256053)
chr3 (46-85)||(34049107-34049146)
chr3 (46-89)||(34645585-34645628)
chr3 (32-83)||(40872100-40872151)
chr3 (46-85)||(43476219-43476258)
chr3 (46-85)||(46989574-46989613)
chr3 (46-85)||(48250876-48250915)
chr3 (46-89)||(52570573-52570616)
chr3 (46-85)||(54389822-54389861)
chr3 (33-84)||(55175687-55175738)
chr3 (46-85)||(55385164-55385203)
[»] chr1 (49 HSPs)
chr1 (46-89)||(6562874-6562917)
chr1 (44-90)||(5845493-5845539)
chr1 (46-90)||(41459218-41459262)
chr1 (46-90)||(47585619-47585663)
chr1 (32-83)||(49502815-49502866)
chr1 (46-84)||(16270032-16270070)
chr1 (33-90)||(1167584-1167641)
chr1 (23-88)||(38689955-38690020)
chr1 (46-83)||(50037277-50037314)
chr1 (46-90)||(5844698-5844742)
chr1 (32-88)||(18609115-18609171)
chr1 (53-89)||(29438034-29438070)
chr1 (32-88)||(30195380-30195436)
chr1 (32-88)||(37992543-37992599)
chr1 (34-90)||(47653702-47653758)
chr1 (32-87)||(9618743-9618798)
chr1 (46-89)||(27115830-27115873)
chr1 (32-87)||(27649278-27649333)
chr1 (46-89)||(29424403-29424446)
chr1 (34-88)||(585675-585729)
chr1 (46-88)||(18609902-18609944)
chr1 (34-80)||(39895027-39895073)
chr1 (46-87)||(7820152-7820193)
chr1 (46-87)||(13147521-13147562)
chr1 (32-85)||(23359342-23359395)
chr1 (32-85)||(44470004-44470057)
chr1 (33-90)||(48812870-48812927)
chr1 (32-84)||(4883261-4883313)
chr1 (33-85)||(19161919-19161971)
chr1 (32-88)||(21700839-21700895)
chr1 (32-84)||(46909571-46909623)
chr1 (46-90)||(47586244-47586288)
chr1 (32-88)||(49660847-49660903)
chr1 (32-84)||(51291579-51291631)
chr1 (33-84)||(586599-586650)
chr1 (46-85)||(11183213-11183252)
chr1 (46-89)||(13173858-13173901)
chr1 (46-85)||(13636129-13636168)
chr1 (32-87)||(23442296-23442351)
chr1 (46-89)||(26633550-26633593)
chr1 (32-87)||(26769188-26769243)
chr1 (32-87)||(28456475-28456530)
chr1 (32-91)||(35254560-35254619)
chr1 (46-89)||(36072392-36072435)
chr1 (54-89)||(36076573-36076608)
chr1 (46-89)||(41804040-41804083)
chr1 (46-89)||(46217325-46217368)
chr1 (46-81)||(46341679-46341714)
chr1 (46-85)||(52802157-52802196)
[»] chr5 (22 HSPs)
chr5 (46-88)||(13838431-13838473)
chr5 (33-90)||(13707445-13707502)
chr5 (33-90)||(29430572-29430629)
chr5 (33-90)||(29430044-29430101)
chr5 (32-88)||(3892433-3892489)
chr5 (30-90)||(27532608-27532668)
chr5 (34-90)||(39742597-39742653)
chr5 (34-90)||(42098325-42098381)
chr5 (34-90)||(42099077-42099133)
chr5 (46-89)||(34682280-34682323)
chr5 (33-83)||(13707925-13707975)
chr5 (46-88)||(28876667-28876709)
chr5 (47-85)||(41798845-41798883)
chr5 (46-88)||(42912885-42912927)
chr5 (33-90)||(13665438-13665495)
chr5 (46-87)||(35926387-35926428)
chr5 (46-87)||(41201753-41201794)
chr5 (32-80)||(20509544-20509592)
chr5 (46-89)||(18538342-18538385)
chr5 (46-85)||(19037477-19037516)
chr5 (34-81)||(25983400-25983447)
chr5 (46-81)||(39743155-39743190)
[»] chr8 (44 HSPs)
chr8 (33-90)||(28694100-28694157)
chr8 (46-90)||(38330538-38330582)
chr8 (23-84)||(39277445-39277506)
chr8 (32-88)||(27502561-27502617)
chr8 (32-84)||(43363253-43363305)
chr8 (32-87)||(2712427-2712482)
chr8 (46-89)||(32382723-32382766)
chr8 (46-89)||(32383212-32383255)
chr8 (46-89)||(32436678-32436721)
chr8 (46-89)||(32437167-32437210)
chr8 (32-87)||(36345028-36345083)
chr8 (32-87)||(43519927-43519982)
chr8 (46-80)||(4529236-4529270)
chr8 (46-88)||(21406291-21406333)
chr8 (46-88)||(21800783-21800825)
chr8 (34-88)||(22014270-22014324)
chr8 (50-88)||(39751097-39751135)
chr8 (48-89)||(7168111-7168152)
chr8 (46-87)||(13783115-13783156)
chr8 (46-87)||(18438659-18438700)
chr8 (46-87)||(40740931-40740972)
chr8 (32-88)||(184545-184601)
chr8 (33-85)||(22550859-22550911)
chr8 (32-84)||(27501628-27501680)
chr8 (30-90)||(30755663-30755723)
chr8 (32-84)||(31745982-31746034)
chr8 (46-90)||(34366933-34366977)
chr8 (32-84)||(38604241-38604293)
chr8 (53-89)||(38872944-38872980)
chr8 (46-82)||(40039156-40039192)
chr8 (32-80)||(45252593-45252641)
chr8 (32-87)||(3695392-3695447)
chr8 (33-88)||(15030908-15030963)
chr8 (46-89)||(18205809-18205852)
chr8 (53-88)||(21835193-21835228)
chr8 (32-87)||(25994471-25994526)
chr8 (46-89)||(28646254-28646297)
chr8 (46-89)||(28650838-28650881)
chr8 (32-87)||(30025036-30025091)
chr8 (46-85)||(39601731-39601770)
chr8 (46-89)||(41855391-41855434)
chr8 (46-89)||(42602483-42602526)
chr8 (46-85)||(44052233-44052272)
chr8 (46-89)||(44727512-44727555)
[»] scaffold0794 (1 HSPs)
scaffold0794 (33-88)||(5295-5350)
[»] chr7 (30 HSPs)
chr7 (32-87)||(26833467-26833522)
chr7 (34-88)||(31324801-31324855)
chr7 (33-87)||(48901436-48901490)
chr7 (46-87)||(38265470-38265511)
chr7 (32-88)||(10098110-10098166)
chr7 (32-88)||(46907560-46907616)
chr7 (32-88)||(49140677-49140733)
chr7 (32-88)||(49141614-49141670)
chr7 (46-89)||(9494813-9494856)
chr7 (32-87)||(30468475-30468530)
chr7 (33-88)||(45791329-45791384)
chr7 (46-89)||(48590346-48590389)
chr7 (46-88)||(29112397-29112439)
chr7 (46-88)||(30791015-30791057)
chr7 (53-87)||(48314698-48314732)
chr7 (32-84)||(7097-7149)
chr7 (32-84)||(8040-8092)
chr7 (47-79)||(10098014-10098046)
chr7 (32-80)||(30471537-30471585)
chr7 (43-87)||(35839411-35839455)
chr7 (32-84)||(42583053-42583105)
chr7 (32-88)||(42794217-42794273)
chr7 (46-85)||(9367731-9367770)
chr7 (33-88)||(18105397-18105452)
chr7 (32-87)||(29097853-29097908)
chr7 (46-89)||(30355246-30355289)
chr7 (46-89)||(33603224-33603267)
chr7 (30-81)||(34742386-34742437)
chr7 (46-81)||(36781456-36781491)
chr7 (32-87)||(38266097-38266152)
[»] scaffold0155 (1 HSPs)
scaffold0155 (52-88)||(12957-12993)
[»] scaffold0065 (1 HSPs)
scaffold0065 (49-87)||(65413-65451)
[»] scaffold0019 (1 HSPs)
scaffold0019 (49-87)||(134324-134362)
[»] scaffold0618 (1 HSPs)
scaffold0618 (44-89)||(3908-3953)
[»] scaffold0016 (1 HSPs)
scaffold0016 (32-88)||(68402-68458)
[»] scaffold0494 (1 HSPs)
scaffold0494 (33-88)||(5355-5410)
[»] scaffold0388 (1 HSPs)
scaffold0388 (33-84)||(13903-13954)
[»] scaffold0199 (1 HSPs)
scaffold0199 (46-85)||(12395-12434)


Alignment Details
Target: chr2 (Bit Score: 50; Significance: 3e-20; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 40055468 - 40055537
Alignment:
Q  10 ttgttccttcatatgcagaattgttttcctcgctaattaactgccgaggttttcttcggtagttaactgc 79  Q
    ||||||||||||| |||||||||||||||||| || |||||||||||||||||| | |||||||||||||    
T  40055468 ttgttccttcataggcagaattgttttcctcggtagttaactgccgaggttttccttggtagttaactgc 40055537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 14456582 - 14456524
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||||| || |||||||||||||||||| |||| |||||||||||||||||||||    
T  14456582 gttttcctcggtagttaactgccgaggttttcctcggcagttaactgcagccggtttta 14456524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 43618639 - 43618597
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  43618639 ttaactgccgaggttttcctcggtagttaactgcagccggttt 43618597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 25184819 - 25184879
Alignment:
Q  28 aattgttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||||||  | |||||| ||||||||||| |||| |||||||||||||||||||    
T  25184819 aattgttttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggttt 25184879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 40055443 - 40055399
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||    
T  40055443 ttaactgccaaggttttcctcggtagttaactgcagccggtttta 40055399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 40221137 - 40221177
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggt 86  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  40221137 ttaactgccgaggttttcctcggtagttaactgcagccggt 40221177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 29600840 - 29600785
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| |||||||||||||||||||||||    
T  29600840 gttttcctcggtagtttactgccgaagttttcctcggtagttaactgcagccggtt 29600785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 41183218 - 41183273
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||  | |||||| ||||||||||| ||||||||||||||||||||||||    
T  41183218 ttttcctcggcagttaactaccgaggttttcctcggtagttaactgcagccggttt 41183273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 2983466 - 2983428
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2983466 ttaactgccgaggttttcctcggtagttaactgcagccg 2983428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 9660039 - 9660103
Alignment:
Q  23 tgcagaattgttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||| ||||||||||||||  |||||||| || |||||||| |||| ||| ||||||||||||||    
T  9660039 tgcataattgttttcctcggcaattaactaccaaggttttcctcggcagtcaactgcagccggtt 9660103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 24541802 - 24541758
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||    
T  24541802 ttaactgccgaggttttcttcggaagttaactgaagccagtttta 24541758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 28420210 - 28420266
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  28420210 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 28420266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 30802120 - 30802064
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  30802120 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 30802064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 39489959 - 39490015
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  39489959 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 39490015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 17911239 - 17911196
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||    
T  17911239 ttaactgctgaggttttcctcggtaattaactgcagccggtttt 17911196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 27276369 - 27276420
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||||  |||||||| ||||||||||| |||| ||||||||||||||||    
T  27276369 tttcctcggcaattaactcccgaggttttcctcggcagttaactgcagccgg 27276420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 89
Target Start/End: Original strand, 43258752 - 43258783
Alignment:
Q  58 gttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||||||||||||||||||||||||||||    
T  43258752 gttttcttcggtagttaactgcagccggtttt 43258783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 43329019 - 43328964
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| ||||| |||||||| |||||| || | ||||||||||||||||||    
T  43329019 gttttcctcggtaatttactgccgaagttttcctcaggagttaactgcagccggtt 43328964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 4286708 - 4286750
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||||||||||| |||| ||||||||||||| |||||    
T  4286708 ttaactgccgaggttttcatcggaagttaactgcagctggttt 4286750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 18000310 - 18000256
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||| | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  18000310 tttcctcgccagttaactaccgaggttttcctcggcagttaactgccgccggttt 18000256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 26543996 - 26544038
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||| ||||||||||| || |||||||||||||||||||||    
T  26543996 ttaactaccgaggttttcctcagtagttaactgcagccggttt 26544038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 31974254 - 31974292
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  31974254 ttaactgccgagattttcctcggtagttaactgcagccg 31974292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 44100793 - 44100847
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||| || |||||| ||||||||||| |||| |||||||||| ||||||||    
T  44100793 tttcctcggtagttaactaccgaggttttcctcggcagttaactgccgccggttt 44100847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 19846962 - 19846909
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggt 86  Q
    ||||||||  || |||| ||||||||||||| |||||||||||||||| |||||    
T  19846962 ttttcctccgtagttaattgccgaggttttcctcggtagttaactgcaaccggt 19846909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 28472090 - 28472123
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgc 79  Q
    |||||| |||||||||||||||||||||||||||    
T  28472090 ttaactaccgaggttttcttcggtagttaactgc 28472123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 29407894 - 29407935
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||| |||||| ||| |||||||||||||||||||    
T  29407894 ttaactgccgaagttttcctcgttagttaactgcagccggtt 29407935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 31568600 - 31568633
Alignment:
Q  57 ggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||||||||||||||||||||||| ||||    
T  31568600 ggttttcttcggtagttaactgcagccggattta 31568633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 33222682 - 33222641
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||| |||||| |||| ||||||||||||||||||    
T  33222682 ttaactgccgaagttttcctcggcagttaactgcagccggtt 33222641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 35490760 - 35490703
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||||||  | |||||| || ||||||||||| | ||||||||||||||||||||    
T  35490760 gttttcctcggcagttaactaccaaggttttcttcagcagttaactgcagccggtttt 35490703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 41565384 - 41565351
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgc 79  Q
    |||||||||||||||||| |||||||||||||||    
T  41565384 ttaactgccgaggttttcctcggtagttaactgc 41565351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 4015099 - 4015151
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||  ||||||||||||||||||||    
T  4015099 gttttcctcggtagtttactgccgaagtttttctcggtagttaactgcagccg 4015151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 6233571 - 6233623
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || | |||||| |||||| ||||||||||||||||||||    
T  6233571 gttttcctcggtagtttattgccgaagttttcctcggtagttaactgcagccg 6233623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 10425812 - 10425864
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  10425812 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 10425864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 15488165 - 15488197
Alignment:
Q  58 gttttcttcggtagttaactgcagccggtttta 90  Q
    |||||| ||||||||||||||||||||||||||    
T  15488165 gttttcatcggtagttaactgcagccggtttta 15488197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 23347342 - 23347374
Alignment:
Q  53 ccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||||||| |||||||||||||||||||||    
T  23347342 ccgaggttttcctcggtagttaactgcagccgg 23347374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 25964878 - 25964838
Alignment:
Q  45 attaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  25964878 attaactaccgaggttttcctcggcagttaactgcagccgg 25964838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 36510849 - 36510901
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| ||||| | |||||| |||||| |||| |||||||||||||||    
T  36510849 gttttcctcggtaatttattgccgaagttttcctcggcagttaactgcagccg 36510901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 89
Target Start/End: Complemental strand, 2648852 - 2648821
Alignment:
Q  58 gttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| |||||||||||||||||||||||||    
T  2648852 gttttcctcggtagttaactgcagccggtttt 2648821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 9088792 - 9088737
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||| |||| || || ||||||||  ||||| |||||||||||||||||||||||    
T  9088792 gtttttctcggtagtttactgccgaaattttcctcggtagttaactgcagccggtt 9088737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 17424198 - 17424159
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  17424198 ttaactaccgaggttttcctcggcagttaactgcagccgg 17424159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 22003395 - 22003450
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  22003395 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 22003450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 84
Target Start/End: Original strand, 24754038 - 24754069
Alignment:
Q  53 ccgaggttttcttcggtagttaactgcagccg 84  Q
    ||||||||||| ||||||||||||||||||||    
T  24754038 ccgaggttttcctcggtagttaactgcagccg 24754069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 29397992 - 29397941
Alignment:
Q  30 ttgttttcctcgctaattaactgccgaggttttcttcggtagttaactgcag 81  Q
    ||||||||||||  | |||||| ||||||||||| |||| ||||||||||||    
T  29397992 ttgttttcctcggcagttaactcccgaggttttcctcggcagttaactgcag 29397941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 34921766 - 34921809
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| || | ||||||||||||||||||||    
T  34921766 ttaactaccgaggttttcctcagcagttaactgcagccggtttt 34921809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 38779636 - 38779691
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || ||||| || |||||| |||| ||||||||||||||||||    
T  38779636 gttttcctcggtagtttactgcagaagttttcctcgggagttaactgcagccggtt 38779691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 41497538 - 41497495
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| | ||||||||||||||||||    
T  41497538 ttaactaccgaggttttcctcggcaattaactgcagccggtttt 41497495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 43982265 - 43982226
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  43982265 ttaactaccgaggttttcctcggcagttaactgcagccgg 43982226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 45475506 - 45475463
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||| ||||||||||    
T  45475506 ttaactaccgaggttttcctcggcagttaactgtagccggtttt 45475463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 5e-16; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 31501699 - 31501641
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttttaa 91  Q
    ||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||    
T  31501699 ttttcctcggtagttaactgccgaggttttcctcggtagataactgcagccggttttaa 31501641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 31496313 - 31496256
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||| || |||||||||||||||||| ||||||| ||||||||||||||||||    
T  31496313 ttttcctcggtagttaactgccgaggttttcctcggtagataactgcagccggtttta 31496256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 17597021 - 17596963
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||||  || |||||||||||| ||||| |||| |||||||||||||||||||||    
T  17597021 gttttcctctgtagttaactgccgagattttcctcggcagttaactgcagccggtttta 17596963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 26184611 - 26184657
Alignment:
Q  44 aattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  26184611 aattaactgtcgatgttttcatcggtagttaactgcagccggtttta 26184657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 18001289 - 18001236
Alignment:
Q  36 tcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| || |||| || ||||||||||||||| ||||||||||||||||||||    
T  18001289 tcctcggtagttaagtgtcgaggttttcttcggcagttaactgcagccggtttt 18001236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 13164253 - 13164309
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  13164253 gttttcctcggtagtttactgccgaagttttcctcgggagttaactgcagccggttt 13164309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 9048141 - 9048098
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| |||| |||||| |||||||||||||||||||||||||    
T  9048141 ttaactaccgaagttttcctcggtagttaactgcagccggtttt 9048098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 9049091 - 9049134
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| |||| |||||| |||||||||||||||||||||||||    
T  9049091 ttaactaccgaagttttcctcggtagttaactgcagccggtttt 9049134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 27616781 - 27616739
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||| |||||||||||||||| |||||||||| ||||||||    
T  27616781 ttaactaccgaggttttcttcggcagttaactgccgccggttt 27616739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 14011799 - 14011754
Alignment:
Q  30 ttgttttcctcgctaattaactgccgaggttttcttcggtagttaa 75  Q
    |||||||||||| || |||||||||||||||||| |||| ||||||    
T  14011799 ttgttttcctcggtagttaactgccgaggttttcctcggcagttaa 14011754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 14012368 - 14012421
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||||||| || ||||||||||| |||||| |||| ||||||||| ||||||    
T  14012368 gttttcctcggtagttaactgccgatgttttcctcggcagttaactgaagccgg 14012421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 31480441 - 31480384
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||| || |||||| ||||||||||| | ||||| |||||||||| |||||||    
T  31480441 ttttcctcggtagttaactcccgaggttttcctgggtagataactgcagctggtttta 31480384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 13382709 - 13382653
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  13382709 gttttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 13382653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 26351089 - 26351145
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  26351089 gttttcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggttt 26351145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 26712216 - 26712272
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||| ||| || |||||| ||||||||||| |||| |||||||||| ||||||||    
T  26712216 gttttcttcggtagttaactaccgaggttttcctcggcagttaactgccgccggttt 26712272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 31771735 - 31771787
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||||||  |||||||| ||||| ||||| |||| ||||||||||||||||    
T  31771735 ttttcctcggcaattaactaccgagattttcctcggcagttaactgcagccgg 31771787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 3380850 - 3380803
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgc 79  Q
    ||||| |||| || ||||||| |||||||||| |||||||||||||||    
T  3380850 gtttttctcggtagttaactgtcgaggttttcctcggtagttaactgc 3380803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 6204893 - 6204854
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  6204893 ttaactaccgaggttttcctcggcagttaactgcagccgg 6204854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 7361257 - 7361214
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| |||||| |||| |||| ||||||||||||||||||||    
T  7361257 ttaactaccgaggatttcctcggcagttaactgcagccggtttt 7361214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 79
Target Start/End: Complemental strand, 7911692 - 7911661
Alignment:
Q  48 aactgccgaggttttcttcggtagttaactgc 79  Q
    ||||||||| ||||||||||||||||||||||    
T  7911692 aactgccgaagttttcttcggtagttaactgc 7911661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 11691860 - 11691821
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  11691860 ttaactaccgaggttttcctcggcagttaactgcagccgg 11691821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 22305174 - 22305135
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  22305174 ttaactaccgaggttttcctcggcagttaactgcagccgg 22305135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 23958956 - 23958913
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| | ||||||||||||||||||    
T  23958956 ttaactaccgaggttttcctcggcatttaactgcagccggtttt 23958913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.000000000000007; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 48578163 - 48578207
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  48578163 ttaactgctgaggttttcttcggtagttaactgcagccggtttta 48578207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 12376065 - 12376010
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| |||||||||||||||||||||||    
T  12376065 gttttcctcggtagtttactgccgaagttttcctcggtagttaactgcagccggtt 12376010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 36480533 - 36480588
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || |||||| |||| |||||| |||||||||||||||||||||||    
T  36480533 gttttcctcggtagttaactaccgaagttttcctcggtagttaactgcagccggtt 36480588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 26791715 - 26791673
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  26791715 ttaactgccgaggtttttctcggtagttaactgcagccggttt 26791673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 37022068 - 37022106
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  37022068 ttaactgccgaggttttcctcggtagttaactgcagccg 37022106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 44051076 - 44051141
Alignment:
Q  23 tgcagaattgttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||| ||||||||||||||  | |||||| |||||| |||| |||| |||||||||||||||||||    
T  44051076 tgcataattgttttcctcggcagttaactaccgaggatttcctcgggagttaactgcagccggttt 44051141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 14201523 - 14201579
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  14201523 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 14201579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 33409589 - 33409545
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||    
T  33409589 ttaactgccgaggttttcctcgggagttaactgcagccgatttta 33409545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 33410236 - 33410280
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||    
T  33410236 ttaactgccgaggttttcctcgggagttaactgcagccgatttta 33410280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 46253563 - 46253507
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  46253563 gttttcctcggtagttcactgccgaagttttcctcggcagttaactgcagccggttt 46253507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 56565837 - 56565781
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || |||||| ||||||||||| |||| |||||||||| ||||||||    
T  56565837 gttttcctcggtagttaactcccgaggttttcctcggcagttaactgccgccggttt 56565781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 1736084 - 1736139
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||| |||| || || |||||||| |||||| |||||||||||||||||||||||    
T  1736084 gttttactcggtagtttactgccgaagttttcctcggtagttaactgcagccggtt 1736139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 11494609 - 11494566
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  11494609 ttaactaccgaggttttcctcggcagttaactgcagccggtttt 11494566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 28322113 - 28322168
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || |  |||||||| ||||||||||||||||||||||||| ||||    
T  28322113 gttttcctcggtagtatactgccgaagttttcttcggtagttaactgcagctggtt 28322168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 29700307 - 29700350
Alignment:
Q  44 aattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||    
T  29700307 aattaactaccgaggttttcctcggcagttaactgcagccggtt 29700350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 40240366 - 40240421
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| || ||||||||||||||||||||    
T  40240366 gttttcctcggtagtttactgccgaagttttcctcagtagttaactgcagccggtt 40240421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 44561337 - 44561380
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||    
T  44561337 ttaactaccgagattttcctcggtagttaactgcagccggtttt 44561380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 10729469 - 10729431
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  10729469 ttaactgctgaggttttcctcggtagttaactgcagccg 10729431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 10943238 - 10943200
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  10943238 ttaactgctgaggttttcctcggtagttaactgcagccg 10943200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 14297211 - 14297169
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||    
T  14297211 ttaactgcggaggttttcctcggtagttaactgcagccagttt 14297169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 14315460 - 14315418
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||    
T  14315460 ttaactgcggaggttttcctcggtagttaactgcagccagttt 14315418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 41933629 - 41933671
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||| ||||||||||  ||||||||||||||||||||||||    
T  41933629 ttaactaccgaggtttttctcggtagttaactgcagccggttt 41933671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 46169195 - 46169249
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||| || || |||||||| |||||| |||| ||||||||||||||||||    
T  46169195 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggtt 46169249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 15995802 - 15995749
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||||||  | |||||| ||||||||||| |||| ||||||||||||||||    
T  15995802 gttttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 15995749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 19069267 - 19069214
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||||||  | |||||| ||||||||||| |||| ||||||||||||||||    
T  19069267 gttttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 19069214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 20208576 - 20208535
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||| ||||||||||| |||| ||||||||||||||||||    
T  20208576 ttaactaccgaggttttcctcggcagttaactgcagccggtt 20208535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 8111412 - 8111464
Alignment:
Q  36 tcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||| || |||||||||||||   || ||||||||||||||||||||||||    
T  8111412 tcctcgatagttaactgccgaggaaatcctcggtagttaactgcagccggttt 8111464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 14200641 - 14200589
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  14200641 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 14200589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 37563273 - 37563329
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  37563273 gttttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 37563329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 39773484 - 39773428
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  39773484 gttttcctcggcagttaactaccgaggttttcctcggcagttaactgctgccggttt 39773428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 40334525 - 40334493
Alignment:
Q  58 gttttcttcggtagttaactgcagccggtttta 90  Q
    ||||| |||||||||||||||||||||||||||    
T  40334525 gtttttttcggtagttaactgcagccggtttta 40334493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 40832723 - 40832667
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| || | |||||||||||||||||||    
T  40832723 gttttcctcggtagtttactgccgaagttttcctcagcagttaactgcagccggttt 40832667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 40833603 - 40833655
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  40833603 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 40833655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 43176624 - 43176676
Alignment:
Q  35 ttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||| || ||||||||||| |||||| |||| ||||||||||||| ||||    
T  43176624 ttcctcggtagttaactgccgaagttttcctcggcagttaactgcagcaggtt 43176676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 46254441 - 46254493
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  46254441 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 46254493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 54634008 - 54634064
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  54634008 gttttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 54634064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 958601 - 958644
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||||| ||||||||    
T  958601 ttaactaccgaggttttcctcggcagttaactgcaaccggtttt 958644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 6178117 - 6178156
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  6178117 ttaactaccgaggttttcctcggcagttaactgcagccgg 6178156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 9655902 - 9655957
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||  | || |||||||| |||||| ||||||||||||||||| |||||    
T  9655902 gttttcctcggcagtttactgccgaagttttcctcggtagttaactgcagtcggtt 9655957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 9890060 - 9890021
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  9890060 ttaactaccgaggttttcctcggcagttaactgcagccgg 9890021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 18884511 - 18884554
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||||||| |||||  |||| ||||||||||||||||||||    
T  18884511 ttaactgccgaagtttttctcggcagttaactgcagccggtttt 18884554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 21018011 - 21018050
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||||||||||||||| |||| |||||| |||||||||    
T  21018011 ttaactgccgaggttttcctcggcagttaattgcagccgg 21018050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 23220757 - 23220706
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    ||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  23220757 ttttcctcggtagtttactgccgaagttttcatcggcagttaactgcagccg 23220706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 28157658 - 28157603
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| ||||||||||| || ||||||||    
T  28157658 gttttcctcggtagtttactgccgaagttttcctcggtagttaattgtagccggtt 28157603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 33383871 - 33383828
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| |||||||||||| |||||||    
T  33383871 ttaacttccgaggttttcctcggcagttaactgcagtcggtttt 33383828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 49094150 - 49094111
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  49094150 ttaactaccgaggttttcctcggcagttaactgcagccgg 49094111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 55793986 - 55793947
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  55793986 ttaactcccgaggttttcctcggcagttaactgcagccgg 55793947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 40; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 18064 - 18107
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  18064 ttaactgtcgaggttttcttcggtagttaactgcagccggtttt 18107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000003; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 21343487 - 21343542
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || ||||||||||| |||||| |||||||||||||||||||||||    
T  21343487 gttttcctcggtagttaactgccgaagttttcctcggtagttaactgcagccggtt 21343542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 45507391 - 45507448
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||  || |||||||||||||||||| |||||||||||||||||||| |||||    
T  45507391 ttttcctccgtagttaactgccgaggttttcctcggtagttaactgcagccgatttta 45507448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 32744145 - 32744200
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| |||||||||||||||||||||||    
T  32744145 gttttcctcggtagtttactgccgaagttttcctcggtagttaactgcagccggtt 32744200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 34712299 - 34712257
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  34712299 ttaactgccgaggttttcctcggtagttaactgcatccggttt 34712257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 6144305 - 6144346
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  6144305 ttaactgccgaagttttcctcggtagttaactgcagccggtt 6144346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 6489418 - 6489353
Alignment:
Q  23 tgcagaattgttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||| ||||||||||||||  | |||||| |||||| |||| |||| |||||||||||||||||||    
T  6489418 tgcataattgttttcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggttt 6489353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 34648209 - 34648254
Alignment:
Q  44 aattaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||    
T  34648209 aatttactgccgaggttttcctcggtcgttaactgcagccggtttt 34648254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 34712766 - 34712807
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  34712766 ttaactgccgaggttttcctcgggagttaactgcagccggtt 34712807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 11248634 - 11248578
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  11248634 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 11248578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 50604427 - 50604463
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagc 82  Q
    |||||||||||||||||| ||||||||||||||||||    
T  50604427 ttaactgccgaggttttcctcggtagttaactgcagc 50604463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 2645535 - 2645480
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||| || |||||||||||||||||| ||||  ||||||||| ||||||||    
T  2645535 ttttcctcggtagttaactgccgaggttttcctcggctgttaactgccgccggttt 2645480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 11269388 - 11269333
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| |||| ||||||||||||||||||    
T  11269388 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggtt 11269333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 19341124 - 19341069
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||  | ||||||| ||| |||||| |||||||||||||||||||||||    
T  19341124 gttttcctcggcagttaactgtcgaagttttcctcggtagttaactgcagccggtt 19341069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 19341601 - 19341640
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  19341601 ttaactgccgaagttttcctcggtagttaactgcagccgg 19341640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 30839167 - 30839210
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||||||||||||| | || ||||||||||||||||||||    
T  30839167 ttaactgccgaggttttccttgggagttaactgcagccggtttt 30839210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 40798957 - 40799012
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || | |||||| |||||| |||||||||||||||||||||||    
T  40798957 gttttcctcggtagtttattgccgaagttttcctcggtagttaactgcagccggtt 40799012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 41803064 - 41803021
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  41803064 ttaactaccgaggttttcctcggcagttaactgcagccggtttt 41803021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 1294084 - 1294126
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||||||||||| |||| |||||||||||| ||||||    
T  1294084 ttaactgccgaggttttcctcggaagttaactgcagtcggttt 1294126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 8156574 - 8156532
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||||||||||| |||| |||||||||| ||||||||    
T  8156574 ttaactgccgaggttttcctcggcagttaactgccgccggttt 8156532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 19440322 - 19440280
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  19440322 ttaactaccgaggttttcctcggcagttaactgcagccggttt 19440280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 49144463 - 49144505
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||| |||||||||||||||| |||||||||| ||||||||    
T  49144463 ttaactaccgaggttttcttcggcagttaactgccgccggttt 49144505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 2743478 - 2743425
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||||||  | |||||| ||||||||||| |||| ||||||||||||||||    
T  2743478 gttttcctcggcagttaactcccgaggttttcctcggcagttaactgcagccgg 2743425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 4002498 - 4002551
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||||||  | |||||| ||||||||||| |||| ||||||||||||||||    
T  4002498 gttttcctcggcagttaactcccgaggttttcctcggcagttaactgcagccgg 4002551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 6143737 - 6143696
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||| |||||| |||| ||||||||||||||||||    
T  6143737 ttaactgccgaagttttcctcggcagttaactgcagccggtt 6143696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 36812917 - 36812864
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||||||  | || ||| ||||||||||| |||||||||||||||||||||    
T  36812917 gttttcctcggcagtttactaccgaggttttcctcggtagttaactgcagccgg 36812864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 41579731 - 41579772
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||| ||||||||||| |||| ||||||||||||||||||    
T  41579731 ttaactaccgaggttttcctcggcagttaactgcagccggtt 41579772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 45101884 - 45101851
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgc 79  Q
    |||||||||||||||||||| |||||||||||||    
T  45101884 ttaactgccgaggttttctttggtagttaactgc 45101851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 46345005 - 46344960
Alignment:
Q  44 aattaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||| ||||||||||| |||| ||||||||||||||| ||||    
T  46345005 aattaactaccgaggttttcctcggcagttaactgcagccgatttt 46344960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 28816994 - 28817046
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  28816994 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 28817046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 34542233 - 34542177
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || ||||||||  ||||| |||| |||||||||||||||||||    
T  34542233 gttttcctcggtagtttactgccgaacttttcctcggcagttaactgcagccggttt 34542177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 34543129 - 34543181
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  34543129 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 34543181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 40798330 - 40798278
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| ||||| |||||||| |||||| |||  |||||||||||||||    
T  40798330 gttttcctcggtaatttactgccgaagttttcctcgacagttaactgcagccg 40798278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 41844357 - 41844413
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  41844357 gttttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 41844413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 51326046 - 51326002
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||| |||||||||  | ||||||||||||||||||||||||    
T  51326046 ttaactgtcgaggtttttcttggtagttaactgcagccggtttta 51326002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 2647706 - 2647745
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  2647706 ttaactaccgaggttttcctcggcagttaactgcagccgg 2647745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 11249517 - 11249568
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagcc 83  Q
    |||||||||| || || |||||||| |||||| |||| ||||||||||||||    
T  11249517 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagcc 11249568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 12897903 - 12897852
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    ||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  12897903 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 12897852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 14043905 - 14043948
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||||||| |||||| |||| ||||||||||||||| ||||    
T  14043905 ttaactgccgaagttttcctcggcagttaactgcagccgatttt 14043948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 19988626 - 19988681
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| || | ||||||||||||||||||    
T  19988626 gttttcctcggtagtttactgccgaagttttcctcagcagttaactgcagccggtt 19988681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 27739561 - 27739612
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    ||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  27739561 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 27739612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 29918356 - 29918391
Alignment:
Q  54 cgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||||| |||| ||||||||||||||||||||    
T  29918356 cgaggttttcctcggcagttaactgcagccggtttt 29918391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 29967509 - 29967544
Alignment:
Q  54 cgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||||| |||| ||||||||||||||||||||    
T  29967509 cgaggttttcctcggcagttaactgcagccggtttt 29967544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 30256018 - 30256053
Alignment:
Q  54 cgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||||| |||| ||||||||||||||||||||    
T  30256018 cgaggttttcctcggcagttaactgcagccggtttt 30256053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 34049146 - 34049107
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  34049146 ttaactaccgaggttttcctcggcagttaactgcagccgg 34049107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 34645628 - 34645585
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||||||||||||| |||  |||||||||||| |||||||    
T  34645628 ttaactgccgaggttttcctcgagagttaactgcagtcggtttt 34645585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 40872151 - 40872100
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagcc 83  Q
    |||||||||| || || ||||||||  ||||| |||||||||||||||||||    
T  40872151 gttttcctcgatagtttactgccgaatttttcctcggtagttaactgcagcc 40872100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 43476258 - 43476219
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  43476258 ttaactaccgaggttttcctcggcagttaactgcagccgg 43476219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 46989613 - 46989574
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  46989613 ttaactaccgaggttttcctcggcagttaactgcagccgg 46989574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 48250876 - 48250915
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  48250876 ttaactcccgaggttttcctcggcagttaactgcagccgg 48250915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 52570573 - 52570616
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||  ||||||||||||||||| |||||||    
T  52570573 ttaactaccgaggtttttctcggtagttaactgcagtcggtttt 52570616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 54389861 - 54389822
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  54389861 ttaactaccgaggttttcctcggcagttaactgcagccgg 54389822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 55175738 - 55175687
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    ||||||||| || || |||||||| |||||| ||| ||||||||||||||||    
T  55175738 ttttcctcggtagtttactgccgaagttttcctcgatagttaactgcagccg 55175687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 55385203 - 55385164
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  55385203 ttaactaccgaggttttcctcggcagttaactgcagccgg 55385164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000003; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 6562874 - 6562917
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  6562874 ttaactgtcgaggttttcttcggtagttaactgcagccggtttt 6562917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 5845493 - 5845539
Alignment:
Q  44 aattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  5845493 aattaattgccgaggttttcctcggtagttaactgcagccggtttta 5845539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 41459218 - 41459262
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||||||||||||| |||||||||||||||||| |||||||    
T  41459218 ttaactgccgaggttttcctcggtagttaactgcagctggtttta 41459262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 47585663 - 47585619
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  47585663 ttaactgccgaggttttcctcggtagttaactgcagccgatttta 47585619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 49502815 - 49502866
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagcc 83  Q
    |||||||||| || ||||||||||| |||||| |||||||||||||||||||    
T  49502815 gttttcctcggtagttaactgccgaagttttcctcggtagttaactgcagcc 49502866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 16270032 - 16270070
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16270032 ttaactgccgaggttttcttcggcagttaactgcagccg 16270070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 1167641 - 1167584
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||| ||| || |||||||||||||||||| ||| ||||||||||||| ||||||||    
T  1167641 ttttcttcggtagttaactgccgaggttttcctcgatagttaactgcagtcggtttta 1167584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 38690020 - 38689955
Alignment:
Q  23 tgcagaattgttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||| ||||||||||||||  | |||||| ||||||||||| | || |||||||||||||||||||    
T  38690020 tgcataattgttttcctcggcagttaactaccgaggttttccttggcagttaactgcagccggttt 38689955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 50037277 - 50037314
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagcc 83  Q
    |||||||||||||||||| |||||||||||||||||||    
T  50037277 ttaactgccgaggttttcctcggtagttaactgcagcc 50037314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 5844742 - 5844698
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||||||||||||||||||| |||||||||| || |||||    
T  5844742 ttaactgccgaggttttcttcggtaattaactgcagtcgatttta 5844698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 18609171 - 18609115
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  18609171 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 18609115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 29438034 - 29438070
Alignment:
Q  53 ccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||||||| |||||||||||||||||||||||||    
T  29438034 ccgaggttttcctcggtagttaactgcagccggtttt 29438070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 30195380 - 30195436
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  30195380 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 30195436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 37992543 - 37992599
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  37992543 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 37992599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 47653702 - 47653758
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||| || || |||||||| |||||| |||| |||||||||||||||||||||    
T  47653702 tttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggtttta 47653758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 9618798 - 9618743
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||  | || |||||||| |||||| |||||||||||||||||||||||    
T  9618798 gttttcctcgggagtttactgccgaagttttcctcggtagttaactgcagccggtt 9618743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 27115830 - 27115873
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||    
T  27115830 ttaactgacgaagttttcttcggcagttaactgcagccggtttt 27115873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 27649333 - 27649278
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||| ||| |||||| |||||||||||||||||||||||    
T  27649333 gttttcctcggtagtttactgtcgaagttttcctcggtagttaactgcagccggtt 27649278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 29424446 - 29424403
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| |||| |||||| |||||||||||||||||||||||||    
T  29424446 ttaactaccgaagttttcctcggtagttaactgcagccggtttt 29424403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 585729 - 585675
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  585729 tttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 585675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 18609902 - 18609944
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||    
T  18609902 ttaactgccgaagttttcctcggtagttaactgccgccggttt 18609944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 39895073 - 39895027
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgca 80  Q
    ||||||||  ||||||||||||| |||||| ||||||||||||||||    
T  39895073 tttcctcgacaattaactgccgaagttttcctcggtagttaactgca 39895027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 7820193 - 7820152
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||| ||||| |||| |||||||||||||||||||    
T  7820193 ttaactgccgaagtttttttcgatagttaactgcagccggtt 7820152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 13147562 - 13147521
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||| |||||||||| ||||||||||||||||| |||||    
T  13147562 ttaactgtcgaggttttcctcggtagttaactgcagtcggtt 13147521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 23359342 - 23359395
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||||||  | || ||| ||||||||||| |||||||||||||||||||||    
T  23359342 gttttcctcggcagtttactaccgaggttttcctcggtagttaactgcagccgg 23359395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 44470004 - 44470057
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||||||||  | |||||| ||||||||||| |||| ||||||||||||||||    
T  44470004 gttttcctcggcagttaactcccgaggttttcctcggcagttaactgcagccgg 44470057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 48812927 - 48812870
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||||||| ||||| |||||||||||| |  | ||||||||||||| |||||||    
T  48812927 ttttcctcgctagttaacagccgaggttttcctatgcagttaactgcagcaggtttta 48812870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 4883313 - 4883261
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  4883313 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 4883261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 19161971 - 19161919
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||||||  | |||||| ||||||||||| |||| ||||||||||||||||    
T  19161971 ttttcctcggcagttaactcccgaggttttcctcggcagttaactgcagccgg 19161919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 21700839 - 21700895
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||| | |||||| |||| |||||||||||||||||||    
T  21700839 gttttcctcggtagtttactgccaaagttttcctcggcagttaactgcagccggttt 21700895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 46909571 - 46909623
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| ||| ||||||||||||||||    
T  46909571 gttttcctcggtagtttactgccgaagttttcctcgatagttaactgcagccg 46909623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 47586244 - 47586288
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||||||||||||  ||||||||||||||||| || |||||    
T  47586244 ttaactgccgaggtttttctcggtagttaactgcagtcgatttta 47586288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 49660903 - 49660847
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||| ||||    
T  49660903 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccagttt 49660847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 51291579 - 51291631
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||| | || || |||||||| |||||| ||||||||||||||||||||    
T  51291579 gttttccttgatagtttactgccgaagttttcctcggtagttaactgcagccg 51291631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 586599 - 586650
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    ||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  586599 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 586650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 11183252 - 11183213
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  11183252 ttaactaccgaggttttcctcggcagttaactgcagccgg 11183213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 13173901 - 13173858
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||||| |||||||| ||||  |||||||||||||||||||    
T  13173901 ttaactgccaaggttttcctcggctgttaactgcagccggtttt 13173858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 13636129 - 13636168
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  13636129 ttaactaccgaggttttcctcggcagttaactgcagccgg 13636168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 23442351 - 23442296
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||  || || |||||||| |||||| ||| |||||||||||||||||||    
T  23442351 gttttcctcaatagtttactgccgaagttttcctcgatagttaactgcagccggtt 23442296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 26633593 - 26633550
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||||| ||||||||    
T  26633593 ttaactaccgaggttttcctcggcagttaactgcaaccggtttt 26633550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 26769243 - 26769188
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| | ||||||||||||||| |||||    
T  26769243 gttttcctcggtagtttactgccgaagttttcctgggtagttaactgcagtcggtt 26769188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 28456530 - 28456475
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||| |||| || || |||||||| |||||| ||| |||||||||||||||||||    
T  28456530 gtttttctcggtagtttactgccgaagttttcctcgatagttaactgcagccggtt 28456475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 35254619 - 35254560
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttttaa 91  Q
    |||||||||  || || |||||||| |||||  |||||||||||||||||||| ||||||    
T  35254619 gttttcctcaatattttactgccgaagtttttctcggtagttaactgcagccgattttaa 35254560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 36072435 - 36072392
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||||||||| ||||    
T  36072435 ttaactaccgaggttttcctcggcagttaactgcagccgatttt 36072392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 36076573 - 36076608
Alignment:
Q  54 cgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||||| |||| ||||||||||||||||||||    
T  36076573 cgaggttttcctcggcagttaactgcagccggtttt 36076608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 41804040 - 41804083
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| |||||||||||| |||||||    
T  41804040 ttaactaccgaggttttcctcggcagttaactgcagtcggtttt 41804083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 46217325 - 46217368
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| |||| |||||| |||||||||||||||||||| ||||    
T  46217325 ttaactaccgaagttttcctcggtagttaactgcagccgatttt 46217368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 46341714 - 46341679
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcag 81  Q
    ||||||||||| |||||| |||||||||||||||||    
T  46341714 ttaactgccgaagttttcctcggtagttaactgcag 46341679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 52802196 - 52802157
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  52802196 ttaactaccgaggttttcctcggcagttaactgcagccgg 52802157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000001; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 13838431 - 13838473
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  13838431 ttaactgccgaggttttcctcggtagttaactgcagccggttt 13838473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 13707502 - 13707445
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||| || ||||||||||||||||| ||||||| ||||||||||||| |||||    
T  13707502 ttttcctcggtagttaactgccgaggtttttttcggtacttaactgcagccgatttta 13707445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 29430572 - 29430629
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||| || |||||||||||||||||| || | |||||||||||||||||||||    
T  29430572 ttttcctcggtagttaactgccgaggttttcctcagcagttaactgcagccggtttta 29430629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 29430101 - 29430044
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||| |||| || |||||||||||||||||| |||| | |||||||||||||||||||    
T  29430101 tttttctcggtagttaactgccgaggttttcctcggcacttaactgcagccggtttta 29430044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 3892433 - 3892489
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  3892433 gttttcctcgatagtttactgccgaagttttcctcggcagttaactgcagccggttt 3892489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 27532608 - 27532668
Alignment:
Q  30 ttgttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||||||||  | |||||||||||||||||| ||| ||||||||||||| | ||||||    
T  27532608 ttgttttcctcggcagttaactgccgaggttttcctcgatagttaactgcagtcagtttta 27532668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 39742653 - 39742597
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||| || |||||||| ||||||||| |||| |||||||||||| ||||||||    
T  39742653 tttcctcggtagttaactgctgaggttttcctcggcagttaactgcagtcggtttta 39742597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 42098381 - 42098325
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||| || ||||| |||||||||||| |||| |||||||||||||| ||||||    
T  42098381 tttcctcggtagttaaccgccgaggttttcctcggcagttaactgcagccagtttta 42098325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 42099077 - 42099133
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||| || |||||||||||||||||| ||| ||||||||| ||||| ||||||    
T  42099077 tttcctcggtagttaactgccgaggttttcctcgatagttaactacagccagtttta 42099133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 34682323 - 34682280
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  34682323 ttaactcccgaggttttcctcggcagttaactgcagccggtttt 34682280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 13707925 - 13707975
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagcc 83  Q
    |||| |||| || ||||||||||| |||||| |||||||||||||||||||    
T  13707925 tttttctcggtagttaactgccgatgttttcctcggtagttaactgcagcc 13707975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 28876709 - 28876667
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||||||||||| |||| |||||||||| ||||||||    
T  28876709 ttaactgccgaggttttcctcgggagttaactgccgccggttt 28876667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 41798883 - 41798845
Alignment:
Q  47 taactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  41798883 taactaccgaggttttcttcggcagttaactgcagccgg 41798845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 42912885 - 42912927
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||    
T  42912885 ttaactgccgaagttttcctcggtagttaactgccgccggttt 42912927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 13665495 - 13665438
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||| ||| || ||||||| |||||||||| || | |||||||||||||||||||||    
T  13665495 ttttcttcggtagttaactgtcgaggttttcctcaggagttaactgcagccggtttta 13665438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 35926428 - 35926387
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||| ||||||||||| |||||||||||||| ||||||||    
T  35926428 ttaactaccgaggttttcctcggtagttaactgtagccggtt 35926387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 41201794 - 41201753
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||| ||||||||||| |||| ||||||||||||||||||    
T  41201794 ttaactaccgaggttttcctcggcagttaactgcagccggtt 41201753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 20509544 - 20509592
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgca 80  Q
    |||||||||| || || |||||||| |||||| ||||||||||||||||    
T  20509544 gttttcctcggtagtttactgccgaagttttcctcggtagttaactgca 20509592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 18538342 - 18538385
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| |||| |||||| |||| ||||||||||||||||||||    
T  18538342 ttaactaccgaagttttcctcggcagttaactgcagccggtttt 18538385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 19037477 - 19037516
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  19037477 ttaactaccgaggttttcctcggcagttaactgcagccgg 19037516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 25983447 - 25983400
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcag 81  Q
    |||||||| || |||||| |||| |||||| |||||||||||||||||    
T  25983447 tttcctcggtagttaactaccgatgttttcctcggtagttaactgcag 25983400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 39743155 - 39743190
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcag 81  Q
    |||||||||||||||||| |||| ||||||||||||    
T  39743155 ttaactgccgaggttttcctcggcagttaactgcag 39743190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.0000000000004; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 28694157 - 28694100
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||| |||| ||||||| |||||||||| |||| |||||||||||||||||||||    
T  28694157 ttttcctggctagttaactggcgaggttttcctcggcagttaactgcagccggtttta 28694100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 38330582 - 38330538
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  38330582 ttaactgccgaggttttcctcagtagttaactgcagccggtttta 38330538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 39277445 - 39277506
Alignment:
Q  23 tgcagaattgttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||| ||||||||||||||  | |||||||| ||||||||| |||||| |||||||||||||    
T  39277445 tgcataattgttttcctcggcagttaactgctgaggttttcctcggtaattaactgcagccg 39277506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 27502561 - 27502617
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  27502561 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 27502617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 43363253 - 43363305
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| ||||||||||||||||||||    
T  43363253 gttttcctcgatagtttactgccgaagttttcctcggtagttaactgcagccg 43363305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 2712482 - 2712427
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||  | |||||||||||  ||||| |||||||||||||||||||||||    
T  2712482 gttttcctcggcagttaactgccgaaattttcctcggtagttaactgcagccggtt 2712427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 32382766 - 32382723
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||| ||||||||||||| || ||||||||||||||||||||||    
T  32382766 ttaattgccgaggttttcctcagtagttaactgcagccggtttt 32382723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 32383212 - 32383255
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||||||||||||||||||| ||||    
T  32383212 ttaactaccgaggttttcctcggtagttaactgcagccgatttt 32383255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 32436721 - 32436678
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||| ||||||||||||| || ||||||||||||||||||||||    
T  32436721 ttaattgccgaggttttcctcagtagttaactgcagccggtttt 32436678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 32437167 - 32437210
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||||||||||||||||||| ||||    
T  32437167 ttaactaccgaggttttcctcggtagttaactgcagccgatttt 32437210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 36345083 - 36345028
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| || ||||||||||||||||||||    
T  36345083 gttttcctcggtagtttactgccgaagttttcctcagtagttaactgcagccggtt 36345028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 43519982 - 43519927
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| ||| |||||||||||||||||||    
T  43519982 gttttcctcggtagtttactgccgaagttttcctcgatagttaactgcagccggtt 43519927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 4529236 - 4529270
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgca 80  Q
    ||||||||||| |||||||||||||||||||||||    
T  4529236 ttaactgccgaagttttcttcggtagttaactgca 4529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 21406333 - 21406291
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||| |||| |||||| ||||||||||||||||||||||||    
T  21406333 ttaactaccgaagttttcctcggtagttaactgcagccggttt 21406291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 21800825 - 21800783
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||| |||| |||||| ||||||||||||||||||||||||    
T  21800825 ttaactaccgaagttttcctcggtagttaactgcagccggttt 21800783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 22014324 - 22014270
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||| || |||||| ||||||||||| |||| |||||||||| ||||||||    
T  22014324 tttcctcggtagttaactaccgaggttttcctcggcagttaactgccgccggttt 22014270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 39751135 - 39751097
Alignment:
Q  50 ctgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  39751135 ctgccgaggttttcctcggcagttaactgcagccggttt 39751097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 7168152 - 7168111
Alignment:
Q  48 aactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||| ||||||||||| |||| ||||||||||||||||||||    
T  7168152 aactaccgaggttttcctcggcagttaactgcagccggtttt 7168111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 13783115 - 13783156
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||| |||||| |||| ||||||||||||||||||    
T  13783115 ttaactgccgaagttttcctcggcagttaactgcagccggtt 13783156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 18438700 - 18438659
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||| ||||||||||| |||| ||||||||||||||||||    
T  18438700 ttaactcccgaggttttcctcggcagttaactgcagccggtt 18438659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 40740972 - 40740931
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||| |||||| |||| ||||||||||||||||||    
T  40740972 ttaactgccgaagttttcctcggcagttaactgcagccggtt 40740931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 184545 - 184601
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  184545 gttttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 184601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 22550859 - 22550911
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||||||  | |||||| ||||||||||| |||| ||||||||||||||||    
T  22550859 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 22550911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 27501680 - 27501628
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  27501680 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 27501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 30755663 - 30755723
Alignment:
Q  30 ttgttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    ||||||| |||| || ||||| || ||||||||| |||| ||||||||||| |||||||||    
T  30755663 ttgttttactcggtagttaacagctgaggttttcctcggcagttaactgcaaccggtttta 30755723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 31745982 - 31746034
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||| | || || |||||||| |||||| ||||||||||||||||||||    
T  31745982 gttttccttggtagtttactgccgaagttttcctcggtagttaactgcagccg 31746034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 34366977 - 34366933
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttta 90  Q
    |||||| ||||||||||| |||| |||||||||||||||| ||||    
T  34366977 ttaactaccgaggttttcctcggaagttaactgcagccggattta 34366933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 38604241 - 38604293
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  38604241 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 38604293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 38872944 - 38872980
Alignment:
Q  53 ccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  38872944 ccgaggttttcctcggcagttaactgcagccggtttt 38872980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 40039192 - 40039156
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagc 82  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  40039192 ttaacttccgaggttttcctcggtagttaactgcagc 40039156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 45252593 - 45252641
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgca 80  Q
    |||||||||| ||||| |||||||| ||||| |||| ||||||||||||    
T  45252593 gttttcctcgataatttactgccgaagtttttttcgatagttaactgca 45252641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 3695447 - 3695392
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||| | || || ||| |||| |||||| |||||||||||||||||||||||    
T  3695447 gttttccttggtagtttactaccgaagttttcctcggtagttaactgcagccggtt 3695392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 15030963 - 15030908
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  15030963 ttttcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggttt 15030908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 18205852 - 18205809
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| | || ||||||||||||||||||||    
T  18205852 ttaactaccgaggttttccttggcagttaactgcagccggtttt 18205809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 21835193 - 21835228
Alignment:
Q  53 ccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||| |||||| ||||||||||||||||||||||||    
T  21835193 ccgaagttttcctcggtagttaactgcagccggttt 21835228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 25994526 - 25994471
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||| |||| || || |||||||| |||||| || ||||||||||||||||||||    
T  25994526 gtttttctcggtagtttactgccgaagttttcctcagtagttaactgcagccggtt 25994471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 28646254 - 28646297
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||||||| |||||| |||| ||||||||||||||| ||||    
T  28646254 ttaactgccgaagttttcctcggcagttaactgcagccgatttt 28646297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 28650838 - 28650881
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    ||||||||||| |||||| |||| ||||||||||||||| ||||    
T  28650838 ttaactgccgaagttttcctcggcagttaactgcagccgatttt 28650881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 30025091 - 30025036
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||| ||| || || |||||||| |||||| ||||||||||||| |||||||||    
T  30025091 gttttcttcggtagtttactgccgaagttttcctcggtagttaactacagccggtt 30025036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 39601770 - 39601731
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  39601770 ttaactcccgaggttttcctcggcagttaactgcagccgg 39601731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 41855434 - 41855391
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||||||||| ||||    
T  41855434 ttaactaccgaggttttcctcggcagttaactgcagccgatttt 41855391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 42602526 - 42602483
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||||| ||||||||    
T  42602526 ttaactaccgaggttttcctcggcagttaactgcatccggtttt 42602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 44052233 - 44052272
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| ||||||| |||||||||||||    
T  44052233 ttaactaccgaggttttcctcggtaggtaactgcagccgg 44052272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 44727512 - 44727555
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| |||| |||||| |||||||||||||||||||| ||||    
T  44727512 ttaactaccgaagttttcctcggtagttaactgcagccgttttt 44727555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 36; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 5350 - 5295
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||  | |||||| ||||||||||| ||||||||||||||||||||||||    
T  5350 ttttcctcggcagttaactaccgaggttttcctcggtagttaactgcagccggttt 5295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.000000000007; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 26833467 - 26833522
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||| | ||||||||||||||||||||||||||||||    
T  26833467 gttttcctcggtagtttactgccaaagttttcttcggtagttaactgcagccggtt 26833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 31324801 - 31324855
Alignment:
Q  34 tttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||| || |||||||||||||||||| ||||||||||||| ||| ||||||    
T  31324801 tttcctcgatagttaactgccgaggttttcctcggtagttaactacagtcggttt 31324855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 48901436 - 48901490
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||| || || |||||||| |||||| |||||||||||||||||||||||    
T  48901436 ttttcctcggtagtttactgccgaagttttcctcggtagttaactgcagccggtt 48901490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 38265511 - 38265470
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  38265511 ttaactgccgaggttttcctcagtagttaactgcagccggtt 38265470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 10098110 - 10098166
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||  | |||||| ||||||||||| |||| |||||||||||||||||||    
T  10098110 gttttcctcgtcagttaactcccgaggttttcctcggcagttaactgcagccggttt 10098166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 46907616 - 46907560
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  46907616 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 46907560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 49140733 - 49140677
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  49140733 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttt 49140677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 49141614 - 49141670
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||||||    
T  49141614 gttttcctcgatagtttactgccgaagttttcctcggcagttaactgcagccggttt 49141670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 9494813 - 9494856
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  9494813 ttaactcccgaggttttcctcggcagttaactgcagccggtttt 9494856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 30468530 - 30468475
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||| |||| || || |||||||| |||||||||| |||||||||||||||||||    
T  30468530 gtttttctcggtagtttactgccgaagttttcttcgatagttaactgcagccggtt 30468475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 45791384 - 45791329
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||| || || ||| |||| |||||| ||||||||||||||||||||||||    
T  45791384 ttttcctcggtagtttactaccgaagttttcctcggtagttaactgcagccggttt 45791329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 48590346 - 48590389
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||    
T  48590346 ttaactgccgagattttcctcggtagttaactgcagccgatttt 48590389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 29112439 - 29112397
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||| |||||| |||| |||||||||||||||||||    
T  29112439 ttaactgccgaagttttcctcggcagttaactgcagccggttt 29112397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 30791015 - 30791057
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||    
T  30791015 ttaactaccgaggttttcctcggtagttaactgccgccggttt 30791057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 48314732 - 48314698
Alignment:
Q  53 ccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||||||||| |||||||||||||||||||||||    
T  48314732 ccgaggttttcgtcggtagttaactgcagccggtt 48314698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 7149 - 7097
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  7149 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 7097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 8040 - 8092
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  8040 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 8092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 10098046 - 10098014
Alignment:
Q  47 taactgccgaggttttcttcggtagttaactgc 79  Q
    ||||| |||||||||||||||||||||||||||    
T  10098046 taactaccgaggttttcttcggtagttaactgc 10098014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 30471537 - 30471585
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgca 80  Q
    |||||||||| ||||| |||||||| |||||| ||| ||||||||||||    
T  30471537 gttttcctcggtaatttactgccgaagttttcctcgatagttaactgca 30471585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 35839455 - 35839411
Alignment:
Q  43 taattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    ||||| ||| |||| |||||| |||||||||||||||||||||||    
T  35839455 taatttacttccgaagttttcctcggtagttaactgcagccggtt 35839411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 42583053 - 42583105
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    |||||||||| || || |||||||| |||||| |||| |||||||||||||||    
T  42583053 gttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccg 42583105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 42794273 - 42794217
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||||||||  | || |||||||| |||||| |||| |||||||||||||||||||    
T  42794273 gttttcctcgggagtttactgccgaagttttcctcggcagttaactgcagccggttt 42794217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 9367731 - 9367770
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  9367731 ttaactaccgaggttttcctcggcagttaactgcagccgg 9367770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 18105452 - 18105397
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  18105452 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 18105397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 29097853 - 29097908
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| ||  | ||||||||  ||||| |||||||||||||||||||||||    
T  29097853 gttttcctcggtagattactgccgaatttttcctcggtagttaactgcagccggtt 29097908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 30355246 - 30355289
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||| ||||||||||| |||| ||||||||||||||| ||||    
T  30355246 ttaactaccgaggttttcctcggcagttaactgcagccgatttt 30355289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 33603267 - 33603224
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||||||||||||| |||| ||||||||||| ||| ||||    
T  33603267 ttaactgccgaggttttcctcgggagttaactgcaaccgatttt 33603224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 34742386 - 34742437
Alignment:
Q  30 ttgttttcctcgctaattaactgccgaggttttcttcggtagttaactgcag 81  Q
    ||||||||||||  | |||||| ||||||||||| |||| ||||||||||||    
T  34742386 ttgttttcctcgacagttaacttccgaggttttcctcggcagttaactgcag 34742437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 36781456 - 36781491
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcag 81  Q
    |||||||||||||||||| |||| ||||||||||||    
T  36781456 ttaactgccgaggttttcctcgggagttaactgcag 36781491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 38266097 - 38266152
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||||| || || |||||||| |||||| | ||||||||||||||| |||||    
T  38266097 gttttcctcgatagtttactgccgaagttttccttggtagttaactgcagtcggtt 38266152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 33; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 12957 - 12993
Alignment:
Q  52 gccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||||| ||||||||||||||||||||||||    
T  12957 gccgaggttttcctcggtagttaactgcagccggttt 12993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 31; Significance: 0.000000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 65413 - 65451
Alignment:
Q  49 actgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  65413 actgccgaagttttcttcggtagttaactgcaaccggtt 65451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.000000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 134324 - 134362
Alignment:
Q  49 actgccgaggttttcttcggtagttaactgcagccggtt 87  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  134324 actgccgaagttttcctcggtagttaactgcagccggtt 134362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 30; Significance: 0.00000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 3953 - 3908
Alignment:
Q  44 aattaactgccgaggttttcttcggtagttaactgcagccggtttt 89  Q
    |||||||| ||||||||||| |||| ||||||||||||||| ||||    
T  3953 aattaactaccgaggttttcctcggcagttaactgcagccgatttt 3908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 68458 - 68402
Alignment:
Q  32 gttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    ||||| |||| || || ||| |||| |||||| ||||||||||||||||||||||||    
T  68458 gtttttctcggtagtttactaccgaagttttcctcggtagttaactgcagccggttt 68402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 28; Significance: 0.0000004; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 5410 - 5355
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccggttt 88  Q
    |||||||||  | |||||| ||||||||||| |||| |||||||||| ||||||||    
T  5410 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 5355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 28; Significance: 0.0000004; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 13903 - 13954
Alignment:
Q  33 ttttcctcgctaattaactgccgaggttttcttcggtagttaactgcagccg 84  Q
    ||||||||| || ||||||||||| |||||  |||| |||||||||||||||    
T  13903 ttttcctcggtagttaactgccgatgtttttctcggcagttaactgcagccg 13954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 28; Significance: 0.0000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 12395 - 12434
Alignment:
Q  46 ttaactgccgaggttttcttcggtagttaactgcagccgg 85  Q
    |||||| ||||||||||| |||| ||||||||||||||||    
T  12395 ttaactaccgaggttttcatcggcagttaactgcagccgg 12434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University