View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1484-Insertion-5 (Length: 565)
Name: NF1484-Insertion-5
Description: NF1484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1484-Insertion-5 |
 | |
|
| [»] chr3 (32 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 518; Significance: 0; HSPs: 32)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 518; E-Value: 0
Query Start/End: Original strand, 8 - 565
Target Start/End: Complemental strand, 24840213 - 24839656
Alignment:
| Q |
8 |
ctttggtcttcctgttttcgcccagcttgaagatcaagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggacttcgaaaggt |
107 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
24840213 |
ctttggtcttcctgttttcgcccaccttgaagatcaagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggatttcgaaaggt |
24840114 |
T |
|
| Q |
108 |
atggcaccttccacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttt |
207 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24840113 |
atggcaccttctacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttt |
24840014 |
T |
|
| Q |
208 |
tccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctag |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24840013 |
tccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctag |
24839914 |
T |
|
| Q |
308 |
cttatataaggatttaaggttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttagtgtacaatcaccc |
407 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
24839913 |
cttatataacgatttaaggttgtttaagaacacaattgttgatttcaaaaaatttcctgataaatttccctttatgctggacgttaatgtacaatcaccc |
24839814 |
T |
|
| Q |
408 |
ttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcata |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
24839813 |
ttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgggcaataatcgagaccatgtattgttgaggtggcata |
24839714 |
T |
|
| Q |
508 |
atgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatga |
565 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
24839713 |
atgttaaggccttgaaaattgacaatgtgaggttggcattagactcagtcatcgatga |
24839656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 8 - 565
Target Start/End: Original strand, 19943598 - 19944153
Alignment:
| Q |
8 |
ctttggtcttcctgtttt-cgcccagcttgaagatcaagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggacttcgaaagg |
106 |
Q |
| |
|
|||||||| ||||||||| | |||| ||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||||||||| || ||| ||||| |
|
|
| T |
19943598 |
ctttggtcatcctgtttttcacccaacttgaagatcaggagattagaaaggtggaacagaagctcatcagcattgaaagccaagagatgatttcaaaagg |
19943697 |
T |
|
| Q |
107 |
tatggcaccttccacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgtt |
206 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
19943698 |
tatggccccttccacatcagtgtggatggatattttcatcgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcaattt--gtt |
19943795 |
T |
|
| Q |
207 |
ttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggcta |
306 |
Q |
| |
|
|| ||||||| |||| | | |||||| ||||| ||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
19943796 |
tttcctcatagatacaatgtggtgaaaagttct--gtttcctattgctgttcatcttgctagagggattcctatggctttggcacctgctgttttggcta |
19943893 |
T |
|
| Q |
307 |
gcttatataaggatttaaggttgtttaagaacacagttgttgatttcaaaaaatttcctgataaattt-ccctttatgttggacgttagtgtacaatcac |
405 |
Q |
| |
|
|||||||||||||||| || ||||||||||| | |||||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
19943894 |
gcttatataaggatttgagtttgtttaagaaacaaattgttgatttgaaaaaatgtcctgataaattttccctttatgttggacgttaatgtacaatcac |
19943993 |
T |
|
| Q |
406 |
ccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggca |
505 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||| |
|
|
| T |
19943994 |
ccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaaccaaagttgatcaataatggagaccatgtattgttgaggtggca |
19944093 |
T |
|
| Q |
506 |
taatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatga |
565 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| |||| |
|
|
| T |
19944094 |
taatgttaaggccttgaaaattgacaatgtggggttggcattagattcagctatcaatga |
19944153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 36 - 553
Target Start/End: Original strand, 19857978 - 19858496
Alignment:
| Q |
36 |
gaagatcaagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggacttcgaaaggtatgg-caccttccacatcagtgtggatg |
134 |
Q |
| |
|
|||||||| || ||| ||| |||||||||||||||||||||||||||| | ||||||| | ||| |||| ||||||||||| ||||||||||| |
|
|
| T |
19857978 |
gaagatcaggaaatgcaagatgtggaacagaagctcatcaacattgaaacaaaggagaggattatcaaaagtattttcaccttccacaacagtgtggatg |
19858077 |
T |
|
| Q |
135 |
gatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctagtgaaat |
234 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| | |||||| |
|
|
| T |
19858078 |
gatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttgtcaatttttgtttttcctaatagatactttaatgtgaaaa |
19858177 |
T |
|
| Q |
235 |
gttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaa |
334 |
Q |
| |
|
| |||||||||||| ||||| || ||| |||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||| || |||||||| |
|
|
| T |
19858178 |
gatctttgtttcctattgctattggtcttgctagaggaaatactatcgctttggcacctgctgttttggctagcttatataacgatttgagtttgtttaa |
19858277 |
T |
|
| Q |
335 |
gaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttagtgtacaatcacccttttacctggttcaagtttgggtttgg |
434 |
Q |
| |
|
||| | ||||||| || ||||||| || | |||||||||| || |||||||||||| |||| |||||||||||||| || ||||||||||||||||| |
|
|
| T |
19858278 |
gaaacaaattgttgaattgaaaaaatgtcgttataaatttccattggtgttggacgttaatgtataatcacccttttacttgcttcaagtttgggtttgg |
19858377 |
T |
|
| Q |
435 |
gaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaattgacaatg |
534 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||| ||| || |||| | | ||||||| || |||||||| ||||||||||||||| ||||||||| |
|
|
| T |
19858378 |
gaaaggttcaaaaatttagagccacaacccatgttgatcaagcatggagaacctttattgtttaggtggcataaggttaaggccttgaaagttgacaatg |
19858477 |
T |
|
| Q |
535 |
tgaggttggcattagactc |
553 |
Q |
| |
|
| | ||||||||||||||| |
|
|
| T |
19858478 |
ttaagttggcattagactc |
19858496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 107 - 550
Target Start/End: Original strand, 19853490 - 19853918
Alignment:
| Q |
107 |
tatggcaccttccacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgtt |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||| | ||||| | | ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19853490 |
tatgccaccttccacatctgtgtggatgacttttttctttggtaaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtctatttttgtt |
19853589 |
T |
|
| Q |
207 |
ttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggcta |
306 |
Q |
| |
|
|| ||||||| ||||| | | |||||| | |||||||||||| ||||| ||| ||| |||||||| ||| ||||| |||||||||||||||||||||||| |
|
|
| T |
19853590 |
tttcctcatagatactttattgtgaaaagatctttgtttcctattgctattcgtcttgctagaggtaatactattgctttggcacctgctgttttggcta |
19853689 |
T |
|
| Q |
307 |
gcttatataaggatttaaggttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttagtgtacaatcacc |
406 |
Q |
| |
|
|||||||||| ||||| || ||||||||||| | | ||||||||||||||||||||||| ||| || |||| | | |||||||| |
|
|
| T |
19853690 |
gcttatataacgatttgagtttgtttaagaaaaaaattgttgatttcaaaaaatttcct-----------ctt-------gatgttaatctgcaatcacc |
19853771 |
T |
|
| Q |
407 |
cttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcat |
506 |
Q |
| |
|
||||||| |||| |||| |||||| ||||| || |||| |||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||| |||||| |
|
|
| T |
19853772 |
cttttacttggtacaagcttgggtgtgggagagattcataaatttgcagccacaaccgaagttgatcaacaatggagaccatgtattgttgaggtggcat |
19853871 |
T |
|
| Q |
507 |
aatgttaa---ggccttgaaaattgacaatgtgaggttggcattaga |
550 |
Q |
| |
|
|| ||| | | ||||||||||| || ||||||||||||||||||| |
|
|
| T |
19853872 |
aaggttgaagcgcccttgaaaattaaccatgtgaggttggcattaga |
19853918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 120 - 337
Target Start/End: Original strand, 19956075 - 19956292
Alignment:
| Q |
120 |
acatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaat |
219 |
Q |
| |
|
|||||| | ||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19956075 |
acatcactatggatggatattttcattgataaaggtagtgaaattgaacatgaagcttttcttgctacttggttgtcaatttttgttttccctcataaat |
19956174 |
T |
|
| Q |
220 |
actctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataagga |
319 |
Q |
| |
|
| ||| |||||| ||| |||||||||| ||| ||||||||| |||||||| ||||||||| |||||||||| |||||||| |||||| |||||||||| |
|
|
| T |
19956175 |
attcttccgtgaaaagttatttgtttcctattgttgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagcatatataagga |
19956274 |
T |
|
| Q |
320 |
tttaaggttgtttaagaa |
337 |
Q |
| |
|
||||| ||||| ||||| |
|
|
| T |
19956275 |
tttaactttgttaaagaa |
19956292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 119 - 352
Target Start/End: Complemental strand, 20016329 - 20016096
Alignment:
| Q |
119 |
cacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaa |
218 |
Q |
| |
|
||||||| ||||||||||||| ||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
20016329 |
cacatcaatgtggatggatatgttcgctgataaaggtagtgaaattgaacatgaagcatttcttgctacttggctgtcaatttttgttttccctcataaa |
20016230 |
T |
|
| Q |
219 |
tactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataagg |
318 |
Q |
| |
|
|||||| |||||| ||| ||||||||| ||||| ||||||| |||||| | ||||||||| |||||||||| ||||| ||||||||| ||||||| | |
|
|
| T |
20016229 |
tactcttccgtgaaaagttgtttgtttccgattgctattcatcttgctagacgaaatcctattgctttggcaccagctgtcttggctagcatatataaag |
20016130 |
T |
|
| Q |
319 |
atttaaggttgtttaagaacacagttgttgattt |
352 |
Q |
| |
|
||||||| ||||||||||| ||| |||||||||| |
|
|
| T |
20016129 |
atttaagtttgtttaagaaaacaattgttgattt |
20016096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 132 - 565
Target Start/End: Original strand, 26653155 - 26653587
Alignment:
| Q |
132 |
atggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctagtga |
231 |
Q |
| |
|
|||||||||||||| || ||||||||||| |||| ||||| ||||| ||||| |||||||||||||||||||||| ||||||| | | | |||||| |
|
|
| T |
26653155 |
atggatattttcattgactaaggtagtgaaattgaacatgatgcattccttgcagcttggttgtcaatttttgtttttcctcatatagaat---tagtga |
26653251 |
T |
|
| Q |
232 |
aatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtt |
331 |
Q |
| |
|
|| ||||||||||| || ||||||||||||| |||||||| ||||||||| |||||||||| |||||||| ||||| |||||||||| || | ||||| |
|
|
| T |
26653252 |
aaagttctttgttttctattgctgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagtatatataaggacttgactttgtt |
26653351 |
T |
|
| Q |
332 |
taagaacacagttgttgattt--caaaaaatt-------tcctgataaatttccctttatgttggacgttagtgtacaatcacccttttacctggttcaa |
422 |
Q |
| |
|
|||||| ||| |||||| ||| ||||| ||| | ||||| |||||| || ||| |||| | ||| ||||||||||||| |||||||| |
|
|
| T |
26653352 |
taagaaaacaattgttggtttgtcaaaatattatgttggtggtgatagatttccttt------ggaagttaatctacgatcacccttttacttggttcaa |
26653445 |
T |
|
| Q |
423 |
gtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttga |
522 |
Q |
| |
|
||||||| ||||| ||||||| ||||||||| |||||||||||||||| ||||| | ||||||| ||||||||| |||||||| |||| | |||| | |
|
|
| T |
26653446 |
atttgggtgtgggagaggttcacaaatttgcaaccacaacccaagttgatcaatagtgaagaccattcattgttgaggtggcataaggttatgccctt-a |
26653544 |
T |
|
| Q |
523 |
aaattgacaatgtgaggttggcattagactcagccatcgatga |
565 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| || ||||| |
|
|
| T |
26653545 |
taatttacaatgtgaggttggcattagactcagcaattgatga |
26653587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 129 - 352
Target Start/End: Complemental strand, 20036721 - 20036498
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
228 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| | | | |
|
|
| T |
20036721 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
20036622 |
T |
|
| Q |
229 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
328 |
Q |
| |
|
||||| |||||||||||||| ||||||| |||| |||||||| |||| |||| |||| |||||||||||||| ||||| ||||||||||||||| || |
|
|
| T |
20036621 |
tgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
20036522 |
T |
|
| Q |
329 |
gtttaagaacacagttgttgattt |
352 |
Q |
| |
|
||||||||| ||| |||||||||| |
|
|
| T |
20036521 |
gtttaagaaaacaattgttgattt |
20036498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 129 - 531
Target Start/End: Original strand, 26647004 - 26647406
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
228 |
Q |
| |
|
||||| |||| |||||| ||||||||||||||| |||| ||||||||||| ||| |||||||||||||| ||| |||||| |||||| | | | | | |
|
|
| T |
26647004 |
tggatcgatagtttcatggataaaggtagtgaaattgaacatgaagcattcctttctacttggttgtcagtttatgtttttcctcatctaaatt---tgg |
26647100 |
T |
|
| Q |
229 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
328 |
Q |
| |
|
||||| ||| |||||||||| ||||||||||||| |||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||||||| || |
|
|
| T |
26647101 |
tgaaaagttgtttgtttcctattgctgttcatcttgctagagggaatccaattgctttggcaccggctgttttagctagcttatataaggatttaagttt |
26647200 |
T |
|
| Q |
329 |
gtttaagaacacagttgttgatttcaaaaaatttcc---------tgataaatttccctttatgttggacgttagtgtacaatcacccttttacctggtt |
419 |
Q |
| |
|
||||||||| ||| |||||||||| |||||| || | ||||| || ||| ||||| |||| | | ||||||||||||||| ||||| |
|
|
| T |
26647201 |
gtttaagaaaacacttgttgatttgaaaaaaatttctgatggtggtgatagatatcc------tttggaagttactcttcaatcacccttttacttggtt |
26647294 |
T |
|
| Q |
420 |
caagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggcct |
519 |
Q |
| |
|
||| ||||||| |||||||||||||||||||| || ||||||||||| |||| ||| | |||||| | | ||||| || |||||||| |||||| || |
|
|
| T |
26647295 |
caaatttgggtgtgggaaaggttcaaaaatttacaaccacaacccaatttgatcaaccaaggagaccctttgttgtttaggtggcataaggttaagatct |
26647394 |
T |
|
| Q |
520 |
tgaaaattgaca |
531 |
Q |
| |
|
|||||||||||| |
|
|
| T |
26647395 |
tgaaaattgaca |
26647406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 19848990 - 19849198
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
228 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| | | | |
|
|
| T |
19848990 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
19849089 |
T |
|
| Q |
229 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
328 |
Q |
| |
|
||||| |||||||||||||| ||||||| |||| |||||||| |||| |||| |||| |||||||||||||| ||||| ||||||||||||||| || |
|
|
| T |
19849090 |
tgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
19849189 |
T |
|
| Q |
329 |
gtttaagaa |
337 |
Q |
| |
|
||||||||| |
|
|
| T |
19849190 |
gtttaagaa |
19849198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 136 - 462
Target Start/End: Original strand, 19812287 - 19812613
Alignment:
| Q |
136 |
atattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctagtgaaatg |
235 |
Q |
| |
|
|||||||| | | ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | |||||| |
|
|
| T |
19812287 |
atattttcgttggtaaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcaatttttgtttttcctcataaata---tttggtgaaaaa |
19812383 |
T |
|
| Q |
236 |
ttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaag |
335 |
Q |
| |
|
||||||||||| | ||| ||| ||| ||||||||| |||||||| |||||||||| ||||| ||||||||| ||||||| |||||||| ||||||||| |
|
|
| T |
19812384 |
gtctttgtttccgatcgctattcttcttgctagagggtatcctattgctttggcaccagctgtcttggctagcatatataaagatttaagtttgtttaag |
19812483 |
T |
|
| Q |
336 |
aacacagttgttgatttcaaaaaatttcc---------tgataaatttccctttatgttggacgttagtgtacaatcacccttttacctggttcaagttt |
426 |
Q |
| |
|
|| ||| |||||||||| ||||| ||| ||||| ||||||| ||||| ||| | | ||||||||||||||| |||||||| ||| |
|
|
| T |
19812484 |
aaaacaattgttgatttgtcaaaatatcctgttggtggtgatagatttccc------ttggagattactcttcaatcacccttttacttggttcaaattt |
19812577 |
T |
|
| Q |
427 |
gggtttgggaaaggttcaaaaatttgcagccacaac |
462 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
19812578 |
gggtttgggagaggttcaaaaatttgcaaccacaac |
19812613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 119 - 350
Target Start/End: Original strand, 20046113 - 20046341
Alignment:
| Q |
119 |
cacatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaa |
218 |
Q |
| |
|
||||||| | ||||||||||| ||||||||||||||||||||| |||| || ||||| || ||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
20046113 |
cacatcattatggatggatatgttcatcgataaaggtagtgaaattgaacacgaagccttccttactacttggttgtcaatttttgtttttcctcataaa |
20046212 |
T |
|
| Q |
219 |
tactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataagg |
318 |
Q |
| |
|
| | | |||||| || ||||||| || ||||| || |||| |||||||| ||||| ||| ||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
20046213 |
aa---tatggtgaaaaattgtttgttttctattgctattaatcttgctagaggaaatccaattgctttggcacctgctgttttgggtagcatatataagg |
20046309 |
T |
|
| Q |
319 |
atttaaggttgtttaagaacacagttgttgat |
350 |
Q |
| |
|
||||||| || |||||||||||| || ||||| |
|
|
| T |
20046310 |
atttaagtttatttaagaacacaattattgat |
20046341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 120 - 337
Target Start/End: Original strand, 19838384 - 19838601
Alignment:
| Q |
120 |
acatcagtgtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaat |
219 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||| ||| |||| |||||||| ||||| |||||||||||||||||||||||||| ||| || || |
|
|
| T |
19838384 |
acatcactatggatggatattttcatcgataaaggtagcgaaattgaacatgaagcttttctagctacttggttgtcaatttttgtttttcctaatcaac |
19838483 |
T |
|
| Q |
220 |
actctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataagga |
319 |
Q |
| |
|
||||| |||||| | | ||||||||| ||| ||||||||| |||||||| ||| ||||| |||||||||| |||||||| |||||| ||||||| || |
|
|
| T |
19838484 |
actcttgcgtgaaaagctttttgtttccaattgttgttcatcttgctagaggaaattctattgctttggcaccagctgttttagctagcatatataatga |
19838583 |
T |
|
| Q |
320 |
tttaaggttgtttaagaa |
337 |
Q |
| |
|
||||| ||||| ||||| |
|
|
| T |
19838584 |
tttaactttgttaaagaa |
19838601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 19818557 - 19818762
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
228 |
Q |
| |
|
|||||||| ||||| || | |||||||| ||| |||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| | | | | |
|
|
| T |
19818557 |
tggatggaaatttttattggtaaaggtaccgaaattgaacatgaagcttttcttgctacttggttatcaatttttgtttttcctcataagaatt---tgg |
19818653 |
T |
|
| Q |
229 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
328 |
Q |
| |
|
||||| || | ||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||||| | | ||||| |||||||| || |
|
|
| T |
19818654 |
tgaaaaattatctgtttcctgttgctgttaatcttgctagagggaatcctattgctttggcaccggctgttttggctaacatttataaagatttaagttt |
19818753 |
T |
|
| Q |
329 |
gtttaagaa |
337 |
Q |
| |
|
||||||||| |
|
|
| T |
19818754 |
gtttaagaa |
19818762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 19971677 - 19971862
Alignment:
| Q |
195 |
tcaatttttgttttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctg |
294 |
Q |
| |
|
|||||||||||||| |||||| ||||| | |||||||| |||||||||||||| ||||| ||||| | | |||||| ||| ||||| |||||||||| |
|
|
| T |
19971677 |
tcaatttttgttttttctcatagatactttatagtgaaaagttctttgtttcctattgctattcatttggttagaggcaatactattgctttggcaccaa |
19971776 |
T |
|
| Q |
295 |
ctgttttggctagcttatataaggatttaaggttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttcccttt |
380 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||| | |||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
19971777 |
ctgttttggctagcttatataaggattgaactctgtttaagaaacaaattgttgatttgaaaaaatatcctgataaatttcccttt |
19971862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 129 - 323
Target Start/End: Original strand, 19989522 - 19989716
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactc-tcta |
227 |
Q |
| |
|
||||||||| ||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| | || | | |
|
|
| T |
19989522 |
tggatggatgttttcattgataaaggtaatgaacttgaacatgaagcatttcttgctacttggttgtcaatttttgttcatccttataaa-agtcgtgtt |
19989620 |
T |
|
| Q |
228 |
gtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggattta |
323 |
Q |
| |
|
||||| ||||||| |||| ||||||| ||||||| |||||||| ||||||||| | || |||||||| ||||||||||| || |||||||||||| |
|
|
| T |
19989621 |
gtgaatagttctttctttcgtgttgctattcatcttgctagaggaaatcctattgcattagcacctgcagttttggctagtttgtataaggattta |
19989716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 20005230 - 20005109
Alignment:
| Q |
17 |
tcctgttttcgcccagcttgaagatcaagagatgagagaggtggaacagaagctcatcaacattgaaagccaagagaggacttcgaaaggtatggcacct |
116 |
Q |
| |
|
|||||||||| |||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| ||| ||||||||||| | | |
|
|
| T |
20005230 |
tcctgttttcacccaacttgaagatcaggagatgagagaggtcgaacagaagctcgtcaacattgaaagccaagagaggatttcaaaaggtatggcgctt |
20005131 |
T |
|
| Q |
117 |
tccacatcagtgtggatggata |
138 |
Q |
| |
|
|||||||| |||||| |||||| |
|
|
| T |
20005130 |
tccacatcggtgtgggtggata |
20005109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 129 - 352
Target Start/End: Original strand, 19951124 - 19951344
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
228 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||| |||||||| || |||| ||||||||||||| |||||||||| ||| |||| | | | | |
|
|
| T |
19951124 |
tggatggatattttcactgataaaggtagtgaaattgaacatgaagccttccttgttacttggttgtcactttttgtttttcctaataataaat---tgg |
19951220 |
T |
|
| Q |
229 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
328 |
Q |
| |
|
||| ||| || | | ||| ||||| ||||||| |||||||| ||||||||| ||||||| || |||||||| |||||| ||||||||||||||| || |
|
|
| T |
19951221 |
tgaggagttattcgctacctattgctattcatcttgctagaggaaatcctattgctttggctccagctgttttagctagcatatataaggatttaacttt |
19951320 |
T |
|
| Q |
329 |
gtttaagaacacagttgttgattt |
352 |
Q |
| |
|
|||||| || || |||||||||| |
|
|
| T |
19951321 |
gtttaaaaaagcaattgttgattt |
19951344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 399 - 565
Target Start/End: Complemental strand, 20016046 - 20015880
Alignment:
| Q |
399 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
498 |
Q |
| |
|
||||||||| |||| |||||||| ||||||| ||||| |||||||||| ||| || |||||||||| ||||| |||| || ||||| | ||||||| | |
|
|
| T |
20016046 |
caatcacccatttatttggttcaaatttgggtgtgggagaggttcaaaattttacaaccacaacccatgttgatcaatcatgaagaccctttattgttta |
20015947 |
T |
|
| Q |
499 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatga |
565 |
Q |
| |
|
| |||||||| ||| |||| ||||||||||||||||| | | |||||||||||||||| || ||||| |
|
|
| T |
20015946 |
ggtggcataaggttcaggctttgaaaattgacaatgttatggtggcattagactcagctattgatga |
20015880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 400 - 553
Target Start/End: Original strand, 19849264 - 19849423
Alignment:
| Q |
400 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgca------gccacaacccaagttgagcaataatcgagaccatgtatt |
493 |
Q |
| |
|
||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||| ||||||| ||| ||||| ||| || | || | | |||| |
|
|
| T |
19849264 |
aatcacccttttatttggttcaaatttgggtgtgggagaggttcaaaaatttgcaaccacagccacaaaccatgttgaccaaccatggggatcctttatt |
19849363 |
T |
|
| Q |
494 |
gttgagatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactc |
553 |
Q |
| |
|
||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19849364 |
gtttagatggcataaggttcaggccttgaaaattgacaatgttaggttggcattagactc |
19849423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 399 - 553
Target Start/End: Original strand, 19956357 - 19956511
Alignment:
| Q |
399 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
498 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||| || || | ||| | | ||||| | |
|
|
| T |
19956357 |
caatcacccttttacttggttcaaatttgggtgtgggaaaggttcaaaaatttacagccacaacccatgttgttgaaccataggaacccttttttgttta |
19956456 |
T |
|
| Q |
499 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactc |
553 |
Q |
| |
|
| |||||||| |||||| |||||| | |||||||||| ||| ||||||||||||| |
|
|
| T |
19956457 |
ggtggcataaggttaagcccttgatagttgacaatgttaggatggcattagactc |
19956511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 400 - 553
Target Start/End: Complemental strand, 20036447 - 20036294
Alignment:
| Q |
400 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgag |
499 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||||| |||| || || | |||| | | ||||| || |
|
|
| T |
20036447 |
aatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttag |
20036348 |
T |
|
| Q |
500 |
atggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactc |
553 |
Q |
| |
|
|||||||| |||||| |||||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
20036347 |
gtggcataaggttaagcccttgatgattgacaatgttaggatggcattagactc |
20036294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 30914651 - 30914728
Alignment:
| Q |
137 |
tattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctca |
214 |
Q |
| |
|
||||||||| ||||||| ||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30914651 |
tattttcattgataaagttagtgaaattgaacatgaagcattccttactacttggttgtcaatttttgttttccctca |
30914728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 552
Target Start/End: Original strand, 19832142 - 19832295
Alignment:
| Q |
399 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgag-accatgtattgttg |
497 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||||| |||| || || | | ||||| | ||||| |
|
|
| T |
19832142 |
caatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacatccacaacccatgttgttgaacaaaggggaaccat-ttttgttt |
19832240 |
T |
|
| Q |
498 |
agatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagact |
552 |
Q |
| |
|
|| |||||||| |||||||||||| |||||||||||| ||| |||||||||||| |
|
|
| T |
19832241 |
aggtggcataaggttaaggccttggtaattgacaatgttaggatggcattagact |
19832295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 465
Target Start/End: Original strand, 19989795 - 19989861
Alignment:
| Q |
399 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaaccca |
465 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||||||| |
|
|
| T |
19989795 |
caatcacccttttacttggttcaagtttgggtttgggagaggttcaaaaatttacaaccacaaccca |
19989861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 405 - 565
Target Start/End: Original strand, 17114992 - 17115152
Alignment:
| Q |
405 |
cccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggc |
504 |
Q |
| |
|
||||||||| |||||||| ||||| | ||||| |||||||||||||| || |||||| ||| ||||| ||| || |||||| | ||||||| || |||| |
|
|
| T |
17114992 |
cccttttacttggttcaaatttggatgtgggagaggttcaaaaatttacaaccacaatccatgttgatcaaccatggagaccctttattgtttaggtggc |
17115091 |
T |
|
| Q |
505 |
ataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagccatcgatga |
565 |
Q |
| |
|
||| ||| ||||| |||||||||||||||| | | | |||||||||| ||| ||||||| |
|
|
| T |
17115092 |
atagggttcaggccgtgaaaattgacaatgttaagctagcattagacttagctgtcgatga |
17115152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 327 - 425
Target Start/End: Original strand, 26652015 - 26652116
Alignment:
| Q |
327 |
ttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttagtg---tacaatcacccttttacctggttcaag |
423 |
Q |
| |
|
||||||||||| ||| |||||||||| ||||||| ||||||||||||| |||| ||||||| |||| || ||||||||||||||||| ||||||||| |
|
|
| T |
26652015 |
ttgtttaagaaaacacttgttgatttgaaaaaatgtcctgataaattttccttgttgttggaggttaatgtactacaatcacccttttacttggttcaag |
26652114 |
T |
|
| Q |
424 |
tt |
425 |
Q |
| |
|
|| |
|
|
| T |
26652115 |
tt |
26652116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 553
Target Start/End: Original strand, 19838666 - 19838820
Alignment:
| Q |
399 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
498 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||||| |||||||||||||| || |||||||| | |||| || | | |||| | | ||||| | |
|
|
| T |
19838666 |
caatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacaaccacaaccaatgttgttgaaccagggggacccttttttgttta |
19838765 |
T |
|
| Q |
499 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactc |
553 |
Q |
| |
|
| |||||||| ||||||||||||| |||||||||| | ||| |||| |||||||| |
|
|
| T |
19838766 |
ggtggcataaagttaaggccttgataattgacaatattaggatggctttagactc |
19838820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 553
Target Start/End: Original strand, 19818827 - 19818987
Alignment:
| Q |
399 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgca------gccacaacccaagttgagcaataatcgagaccatgtat |
492 |
Q |
| |
|
|||||||||||||| |||||||| | ||||| ||||| |||||||||||| |||| ||||||| ||| ||||| || || |||||| | | | |
|
|
| T |
19818827 |
caatcacccttttatttggttcaaatatgggtgtgggagaggttcaaaaatatgcaaccactgccacaaaccatgttgataaaccatggagacccttttt |
19818926 |
T |
|
| Q |
493 |
tgttgagatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactc |
553 |
Q |
| |
|
|||| || |||||| ||||| |||||||| ||||||||||||| ||| ||||||||||||| |
|
|
| T |
19818927 |
tgtttaggtggcatgatgttcaggccttggaaattgacaatgttaggatggcattagactc |
19818987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 556
Target Start/End: Original strand, 19951394 - 19951551
Alignment:
| Q |
399 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
498 |
Q |
| |
|
||||||||||||||| |||||||| ||||| ||||||| ||||| |||||||| || |||||||||| | || || || |||||| | | ||||| | |
|
|
| T |
19951394 |
caatcacccttttacttggttcaaatttggatttgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgttta |
19951493 |
T |
|
| Q |
499 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagc |
556 |
Q |
| |
|
| |||||||| |||||| |||||| ||| || |||| ||||| ||||||||| |||| |
|
|
| T |
19951494 |
ggtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagc |
19951551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 554
Target Start/End: Original strand, 20046395 - 20046548
Alignment:
| Q |
401 |
atcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgaga |
500 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||| |||||| ||| || | |||||||||| ||||| |||| | |||| | ||||||| || |
|
|
| T |
20046395 |
atcacccttttatttggttcaagtttgggtgtgggagaggttcgcaaaattaccaccacaacccatgttgatcaatcccagcgaccctttattgtttagg |
20046494 |
T |
|
| Q |
501 |
tggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactca |
554 |
Q |
| |
|
|||||||| ||| | || ||||||||||| ||||| | |||||||||||||||| |
|
|
| T |
20046495 |
tggcataaggttcacgcattgaaaattgataatgttaagttggcattagactca |
20046548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 30914919 - 30914971
Alignment:
| Q |
402 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgca |
454 |
Q |
| |
|
||||||||| || |||| ||| ||||||||||||| ||||| ||||||||||| |
|
|
| T |
30914919 |
tcaccctttgacttggtacaaatttgggtttgggagaggttaaaaaatttgca |
30914971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 133; Significance: 7e-69; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 128 - 542
Target Start/End: Complemental strand, 22689774 - 22689378
Alignment:
| Q |
128 |
gtggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatac-tctct |
226 |
Q |
| |
|
|||||||||| ||||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| | | || |
|
|
| T |
22689774 |
gtggatggatgttttcatcgataatggtaatgaatttgaacatgaagcatttcttgctacttggttgtcaatttttgtttttcctcataaaaatatgtcg |
22689675 |
T |
|
| Q |
227 |
agtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaagg |
326 |
Q |
| |
|
|| ||| ||||||||||| || || || ||||||| |||||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
22689674 |
-gtcaaaagttctttgtttactatttctattcatctggctagaggcaatactattgctttggcacctgctgttttggctagcatatataaggatttgagt |
22689576 |
T |
|
| Q |
327 |
ttgtttaagaacacagttgttgatttcaaaaaatttcctgataaatttccctttatgttggacgttagtgtacaatcacccttttacctggttcaagttt |
426 |
Q |
| |
|
||||||||||| | |||||||||||||||||| ||||| | || |||| | | ||||||||||||||| |||||||||||| |
|
|
| T |
22689575 |
ttgtttaagaaacaaattgttgatttcaaaaaatgtcctgtt------------------gatgttaatctgcaatcacccttttacttggttcaagttt |
22689494 |
T |
|
| Q |
427 |
gggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaat |
526 |
Q |
| |
|
|||| ||||| ||||||||||||||||| |||| |||| ||||| ||||| | |||||||||||| |||| |||||| ||||| || |||||||| |
|
|
| T |
22689493 |
gggtgtgggagaggttcaaaaatttgcaaccacggcccatgttgatcaatagtgaagaccatgtattattgaagtggcatttggttaatgctttgaaaat |
22689394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 368 - 556
Target Start/End: Original strand, 11544312 - 11544500
Alignment:
| Q |
368 |
taaatttccctttatgttggacgttagtgtacaatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaag |
467 |
Q |
| |
|
||||||||| || | |||||| ||| ||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |
|
|
| T |
11544312 |
taaatttccattgaagttggaggttgatgtgcaatcacccatttacttggttcaagtttgggtttgggagaggttcaaaaatttgcaaccaaaacccaag |
11544411 |
T |
|
| Q |
468 |
ttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagc |
556 |
Q |
| |
|
|||| ||| ||| ||||||||||| || |||| |||||| ||||| ||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
11544412 |
ttgatcaacaatggagaccatgtactgatgaggtggcatttggttaaacccttgaaaattgataatgtgaggttggcattagattcagc |
11544500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 227 - 352
Target Start/End: Complemental strand, 22651913 - 22651788
Alignment:
| Q |
227 |
agtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaagg |
326 |
Q |
| |
|
||||||| ||| |||||||||| ||||||||||||| |||||||| ||||||||| |||| ||||| ||||||||||||||| | ||||||||||||| |
|
|
| T |
22651913 |
agtgaaaagttgtttgtttcctattgctgttcatcttgctagaggaaatcctattgcttttgcaccagctgttttggctagcatgtataaggatttaact |
22651814 |
T |
|
| Q |
327 |
ttgtttaagaacacagttgttgattt |
352 |
Q |
| |
|
||||||||||| ||| |||||||||| |
|
|
| T |
22651813 |
ttgtttaagaaaacaattgttgattt |
22651788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 22652206 - 22652113
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatact |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |||||||| || ||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
22652206 |
tggatggatattttcatcgataaaggtagtgaaattgaacatgaagcgttccttgctacttggttgtcaatttttgtttttgctcatagatact |
22652113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 149 - 288
Target Start/End: Complemental strand, 22685778 - 22685642
Alignment:
| Q |
149 |
taaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctagtgaaatgttctttgtttcct |
248 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||| | | |||||| |||| ||||||| |
|
|
| T |
22685778 |
taaaggtagtgaaattgagcatgaagcatttcttgctgcttggttgtcactttttgtttttcctcataaa---attttggtgaaaacttctatgtttccg |
22685682 |
T |
|
| Q |
249 |
gttgctgttcatctagctagagggaatcctatttctttgg |
288 |
Q |
| |
|
||||| ||||||| |||||||||||||||||| |||||| |
|
|
| T |
22685681 |
attgctattcatcttgctagagggaatcctattgctttgg |
22685642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 235 - 454
Target Start/End: Complemental strand, 11564146 - 11563918
Alignment:
| Q |
235 |
gttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaa |
334 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||| || |||||| |||| ||||| | ||| ||||| |||||||||||||||| | |||||||| |
|
|
| T |
11564146 |
gttctttgtttcctattgctgttcatcttgctagaggaaaacctattgctttagcaccgtcggttctggcttgcttatataaggatttgcgtttgtttaa |
11564047 |
T |
|
| Q |
335 |
gaacacagttgttgatttcaaaaaatttcc---------tgataaatttccctttatgttggacgttagtgtacaatcacccttttacctggttcaagtt |
425 |
Q |
| |
|
| | ||| |||||| || | |||| | | || ||||||||| || | | |||| |||| ||||||||||||| ||||| ||||| ||||| |
|
|
| T |
11564046 |
ggagacaattgttggattgacaaaaactacaacagaaggtgctaaatttccattgaaggtggaggttaatgtacaatcacccatttacttggttaaagtt |
11563947 |
T |
|
| Q |
426 |
tgggtttgggaaaggttcaaaaatttgca |
454 |
Q |
| |
|
||| ||||||| ||||||||||||||||| |
|
|
| T |
11563946 |
tggctttgggagaggttcaaaaatttgca |
11563918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 129 - 553
Target Start/End: Original strand, 9815037 - 9815461
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
228 |
Q |
| |
|
||||||||| |||||||||| |||||||||||| ||||||||||||| || ||||||| ||||||||||| |||||||| |||||||| ||| | | |
|
|
| T |
9815037 |
tggatggattttttcatcgacaaaggtagtgaaattgagcatgaagcgttcattgctacgtggttgtcaatctttgttttaactcataaa---tctttgg |
9815133 |
T |
|
| Q |
229 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
328 |
Q |
| |
|
||||| ||||||||||| || ||||| ||||||| |||||||| ||| ||||| |||||||||| |||||||| ||||| | ||||| |||||||| || |
|
|
| T |
9815134 |
tgaaaagttctttgttttctattgctattcatcttgctagaggaaattctattgctttggcaccagctgttttagctagtatttataacgatttaagttt |
9815233 |
T |
|
| Q |
329 |
gtttaagaacacagttgttgatttcaaaaaatt---------tcctgataaatttccctttatgttggacgttagtgtacaatcacccttttacctggtt |
419 |
Q |
| |
|
||||||||| ||| | ||| |||| |||||| | ||||| || | |||||| || |||| | | ||||||||||||||| ||||| |
|
|
| T |
9815234 |
gtttaagaaaacaatagttaatttgtcaaaattatctgttggtggtgatagatat-ccttta-----gaagttactcttcaatcacccttttacttggtt |
9815327 |
T |
|
| Q |
420 |
caagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagatggcataatgttaaggcct |
519 |
Q |
| |
|
||| ||||||| ||||| |||||| ||||||| |||||| |||||| ||||| |||| | |||||| | ||||||| || || ||||| ||| |||||| |
|
|
| T |
9815328 |
caaatttgggtgtgggagaggttccaaaatttacagccagaacccatgttgatcaatcacggagaccctttattgtttaggtgacataaggttcaggcct |
9815427 |
T |
|
| Q |
520 |
tgaaaattgacaatgtgaggttggcattagactc |
553 |
Q |
| |
|
|||||||||||||||| | | ||||||||||||| |
|
|
| T |
9815428 |
tgaaaattgacaatgttaagctggcattagactc |
9815461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 129 - 352
Target Start/End: Complemental strand, 26355045 - 26354822
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
228 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||| ||||||||||| ||| | ||||||| |||||||||||||| ||| |||| | | | |
|
|
| T |
26355045 |
tggatggatgttttcatggataaaggtagtgaagttgaacatgaagcattcattgttgcttggttatcaatttttgtttttcctagaaaatgcatgttgg |
26354946 |
T |
|
| Q |
229 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
328 |
Q |
| |
|
||||| |||||||||||||| ||||| ||||||| |||||||| ||| ||||| |||||||||| |||||||| |||||| |||||||||||||||| | |
|
|
| T |
26354945 |
tgaaaagttctttgtttcctattgctattcatcttgctagaggaaattctattgctttggcaccggctgttttagctagcatatataaggatttaagcgt |
26354846 |
T |
|
| Q |
329 |
gtttaagaacacagttgttgattt |
352 |
Q |
| |
|
||||||||| || |||||||||| |
|
|
| T |
26354845 |
gtttaagaaaaccattgttgattt |
26354822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 399 - 552
Target Start/End: Complemental strand, 26354772 - 26354619
Alignment:
| Q |
399 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttga |
498 |
Q |
| |
|
|||||||| |||||| |||||||| ||||||| ||||| ||||||||||| || || || ||||||| ||||| ||| | |||||| | ||||||| | |
|
|
| T |
26354772 |
caatcaccgttttacttggttcaaatttgggtgtgggagaggttcaaaaaattacaaccgcaacccatgttgatcaaccgtggagaccctttattgttta |
26354673 |
T |
|
| Q |
499 |
gatggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagact |
552 |
Q |
| |
|
||||||||| || | |||||||||||||||||||| | | ||| |||||||| |
|
|
| T |
26354672 |
gatggcatagggtacaagccttgaaaattgacaatgttaagctggaattagact |
26354619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 1717214 - 1717419
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
228 |
Q |
| |
|
||||||||| |||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||| || | | |
|
|
| T |
1717214 |
tggatggatgtttttgttgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcggtttatgtttttcctcataaag---ctttgg |
1717310 |
T |
|
| Q |
229 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggtt |
328 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||| |||||||| |||||| ||||||||||||||| || |
|
|
| T |
1717311 |
tgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaacttt |
1717410 |
T |
|
| Q |
329 |
gtttaagaa |
337 |
Q |
| |
|
||||||||| |
|
|
| T |
1717411 |
gtttaagaa |
1717419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 1717471 - 1717532
Alignment:
| Q |
386 |
ggacgttagtgtacaatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaa |
447 |
Q |
| |
|
||| |||||| | ||||||||||||||| |||||||| ||||||| | || ||||||||||| |
|
|
| T |
1717471 |
ggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
1717532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 6398261 - 6398468
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
228 |
Q |
| |
|
||||||||||| || ||| |||||||||||||| |||| |||||||| || ||||||| |||||||| |||||||||||| ||| |||| | | | |
|
|
| T |
6398261 |
tggatggatatgtttatctataaaggtagtgaaattgaacatgaagccttccttgctaattggttgttaatttttgtttttcctagtaaa---acaatgg |
6398357 |
T |
|
| Q |
229 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagc--ttatataaggatttaagg |
326 |
Q |
| |
|
||||| ||| ||||||| || |||||||| |||| |||||||| ||||| || ||||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
6398358 |
tgaaaagttgtttgttttctattgctgttaatctcgctagaggaaatccaatcggtttggcaccagctgttttagctagcatatatataaggatttaact |
6398457 |
T |
|
| Q |
327 |
ttgtttaagaa |
337 |
Q |
| |
|
|| |||||||| |
|
|
| T |
6398458 |
ttatttaagaa |
6398468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 6397856 - 6397767
Alignment:
| Q |
129 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaa |
218 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||| |||||||| || |||||||| ||||||||||||| || ||| |||| |||| |
|
|
| T |
6397856 |
tggatggatatgttcatcgataaaggtagtgaaattgaacatgaagccttccttgctacctggttgtcaatttgtgcttttcctcctaaa |
6397767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 6397732 - 6397634
Alignment:
| Q |
254 |
tgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaacacagttgttgattt |
352 |
Q |
| |
|
|||| |||| ||||||| ||||| ||| |||||||||| |||||||||||| | |||||||||||||| || |||||||| ||| || ||||||| |
|
|
| T |
6397732 |
tgttaatcttgctagagaaaatccaattgctttggcaccatctgttttggctatcatatataaggatttatctttatttaagaaaacaattattgattt |
6397634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 6398537 - 6398606
Alignment:
| Q |
402 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttga |
471 |
Q |
| |
|
||||| |||||| |||||||||||| ||| ||||| ||||||| ||| ||||| ||||||| || ||||| |
|
|
| T |
6398537 |
tcacctttttacgtggttcaagtttaggtgtgggagaggttcacaaacttgcaaccacaactcatgttga |
6398606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000005; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 337
Target Start/End: Complemental strand, 12580143 - 12579995
Alignment:
| Q |
185 |
tacttggttgtcaatttttgttttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttct |
284 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| | | |||| | ||| ||||||| |||||| |||| |||| |||||| | ||||| |||||| |
|
|
| T |
12580143 |
tacttggttgtcaatttttgtttttcctcataaaaa----atggtgacaagttgtttgttttctgttggtgttaatcttgctagaagaaatccaatttct |
12580048 |
T |
|
| Q |
285 |
ttggcacctgctgttttggctagcttatataaggatttaaggttgtttaagaa |
337 |
Q |
| |
|
|||| | ||||||||||||| || |||||||||||| || |||||||| |
|
|
| T |
12580047 |
ttggtggcaattgttttggctagcataaataaggatttaacattatttaagaa |
12579995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 12581426 - 12581476
Alignment:
| Q |
163 |
ttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctc |
213 |
Q |
| |
|
|||| |||||||| || ||||||||||||||||||||||||||||| |||| |
|
|
| T |
12581426 |
ttgaacatgaagccttccttgctacttggttgtcaatttttgtttttcctc |
12581476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 12497243 - 12497296
Alignment:
| Q |
163 |
ttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcata |
216 |
Q |
| |
|
|||| |||||||| || |||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
12497243 |
ttgaacatgaagccttccttgctacctggttgtcaatttttgtttttcctcata |
12497296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 12521108 - 12521161
Alignment:
| Q |
163 |
ttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcata |
216 |
Q |
| |
|
|||| |||||||| || |||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
12521108 |
ttgaacatgaagccttccttgctacctggttgtcaatttttgtttttcctcata |
12521161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 535
Target Start/End: Original strand, 12497482 - 12497614
Alignment:
| Q |
402 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagat |
501 |
Q |
| |
|
||||| |||||| ||||||| ||||||||| |||| ||| || ||| ||||| ||||||| || ||||| ||| | ||| ||| |||||||||| | |
|
|
| T |
12497482 |
tcacctttttacttggttcatgtttgggtt-gggagaggctcgcaaacttgcaaccacaactcatgttgatcaaccacatagaacatttattgttgaggt |
12497580 |
T |
|
| Q |
502 |
ggcataatgttaaggccttgaaaattgacaatgt |
535 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||| |
|
|
| T |
12497581 |
ggcataaggttctggccttgaaaattggcaatgt |
12497614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 535
Target Start/End: Original strand, 12521347 - 12521479
Alignment:
| Q |
402 |
tcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgagcaataatcgagaccatgtattgttgagat |
501 |
Q |
| |
|
||||| |||||| ||||||| ||||||||| |||| ||| || ||| ||||| ||||||| || ||||| ||| | ||| ||| |||||||||| | |
|
|
| T |
12521347 |
tcacctttttacttggttcatgtttgggtt-gggagaggctcgcaaacttgcaaccacaactcatgttgatcaaccacatagaacatttattgttgaggt |
12521445 |
T |
|
| Q |
502 |
ggcataatgttaaggccttgaaaattgacaatgt |
535 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||| |
|
|
| T |
12521446 |
ggcataaggttctggccttgaaaattggcaatgt |
12521479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 12519853 - 12519821
Alignment:
| Q |
186 |
acttggttgtcaatttttgttttccctcataaa |
218 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
12519853 |
acttggttgtcaatttttgtttttcctcataaa |
12519821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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