View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14841_high_21 (Length: 325)
Name: NF14841_high_21
Description: NF14841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14841_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 8 - 308
Target Start/End: Original strand, 1216121 - 1216421
Alignment:
| Q |
8 |
tcgaagaatattggaaatggttcgattcagttcagttttaacgcattcagttttggttataaaccaaactttgaggagggagggagggttcaacaagaaa |
107 |
Q |
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| T |
1216121 |
tcgaacaaaattggaaatggttcggttcagttcagttttaacgcattcagttttggttataaaccaaactttgaggagggagggagggttcaacaagaaa |
1216220 |
T |
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| Q |
108 |
acctaatgttttgttttgtcgcttcagatatggaagtagatccaaaagatttaaaacgcaaagtacaatttgaggagggagtgttcaacaagaaacctcg |
207 |
Q |
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| T |
1216221 |
acctaatgttttgttttgtcgcttcagatatggaagtagatccaaaagatttaaaacgcagagtacaatttgaggagggagtgttcaacaagaaacctcg |
1216320 |
T |
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| Q |
208 |
ccttctaatatttcatttaaggtagtacaaaaatactaatatgttatgcgttcttaaagaagcatatgcttatataaacatgtacttatgtacgtatgca |
307 |
Q |
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| T |
1216321 |
ccttctaacatttcgtttaaggtagtacaaaaatactaatatgttatgcgttcttaaagaagcatatgcttatataaacatgtacttacgtacgtatgca |
1216420 |
T |
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| Q |
308 |
t |
308 |
Q |
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| T |
1216421 |
t |
1216421 |
T |
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