View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14841_high_40 (Length: 226)
Name: NF14841_high_40
Description: NF14841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14841_high_40 |
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Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 40954048 - 40954241
Alignment:
| Q |
17 |
attaattcctatatatacagcattgtggaaactacaggaaggtagttactagttacaatggagcgtttgaagaaatcaccatcaacttcatcacaaagac |
116 |
Q |
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| T |
40954048 |
attaattcctatatatacagcattgtggaaactacaggaaggtagttactagttacaatggagcgtttgaagaaatcaccatcatcttcatcacaaagac |
40954147 |
T |
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| Q |
117 |
catcatttccgagggaccctcgaggatccctcgaagtattcaatccaacaagcaactcaacctcaccggtacgttctccgtcacacctgaaaac |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40954148 |
catcatttccgagggaccctcgaggatccctcgaagtattcaatccaacaagcaactcaacctcaccggtacgttctccgtcacacctgaaaac |
40954241 |
T |
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