View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14841_high_45 (Length: 206)
Name: NF14841_high_45
Description: NF14841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14841_high_45 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 5776778 - 5776573
Alignment:
| Q |
1 |
catgtgattaagttgaattaatttatttaatcaatannnnnnnnnacgggtgtcagagtgtagtgtcatgtctgattcataaggctttttattaattcgt |
100 |
Q |
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| T |
5776778 |
catgtgattaagttgaattaatttatttaatcaatatttttttttacgggtgtcagagtgtagtgtcatgtctgattcataaggctttttattaattcgt |
5776679 |
T |
|
| Q |
101 |
ctcatggttatttatttgaatttgaatacattactcattatgttaattttgttggttgaagatcactgaattgagcaatcattttgagaagtgtcagcag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5776678 |
ctcatggttatttatttgaatttgaatacattactcattatgttaattttgttggttgaagatcactgaattgagcaatcattttgagaagtgtcagcag |
5776579 |
T |
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| Q |
201 |
ctgtta |
206 |
Q |
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|||||| |
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| T |
5776578 |
ctgtta |
5776573 |
T |
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