View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14841_high_5 (Length: 485)
Name: NF14841_high_5
Description: NF14841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14841_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 1 - 468
Target Start/End: Original strand, 51756123 - 51756590
Alignment:
| Q |
1 |
ggtatacatgccaagatttaacggtgattaatggcaacgttgttaggttttgggatgaagatttcgagtttgcttcctttgcaaatggaggaatcaaata |
100 |
Q |
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| T |
51756123 |
ggtatacatgccaagatttaacggtgattaacggcaacgttgttaggttttgggatgaagagttcgagtttgcttcctttgcaaatggaggaatcaaata |
51756222 |
T |
|
| Q |
101 |
acagcttcagttgtatgttcttgtatggtagtaatcactaattagattagatagagaaacataagtatgttataataatattgctatcatcaatgtatat |
200 |
Q |
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| T |
51756223 |
acagcttcagctgtatgttcttgtatggtagtaatcactaattagattagatagagaaacataagtatgttataataatattgttatcatcaatgtatat |
51756322 |
T |
|
| Q |
201 |
atggtggtgggttaattaatttggataacatatatcatgataagttgatatataatcctctcctcattcatgctctttgggactcaaatttgtaacgcaa |
300 |
Q |
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| T |
51756323 |
atggtggtgggttaattaatttggataatatatatcatgataagttgatatataatcatctcctcattcatgctctttggctctcaaatttgtaacgcaa |
51756422 |
T |
|
| Q |
301 |
agtgttgatatagagcaaccaattaattctccgtatattttttctgtatctctttttgtcaatcatgtatataaaattaatattccatattcaagtatca |
400 |
Q |
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| T |
51756423 |
agtgttgatatagagcaaccaattaattctccgtacattttttctgtatctctttttgtcaatcatgtatataaaattaatattccatattcaagtatca |
51756522 |
T |
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| Q |
401 |
gaaaataaattaagtgtcaaagttggtaatgaattgaagagtgaaatgaaattgtgttgtgatatgta |
468 |
Q |
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| T |
51756523 |
gaaaataaattaagtgtcaaagttggtaatgaattgaagagtgaaatgaaattgtgttgtgctatgta |
51756590 |
T |
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