View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14841_low_30 (Length: 272)
Name: NF14841_low_30
Description: NF14841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14841_low_30 |
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Alignment Details
Target: chr3 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 55103535 - 55103785
Alignment:
| Q |
18 |
agtattttatatatagtgattaagagaatatttaatttgaggcagatggagtagctcttttctgggggatagattactacaacaatgaattattgcattc |
117 |
Q |
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| T |
55103535 |
agtattttatatatagtgattaagagattatttaatttgaggcagatggagtagctcttttctgggggatagattactacaacaatgaattattgcattc |
55103634 |
T |
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| Q |
118 |
tgataaggaacgagttggttctgtgacaacagagatactattggaaaaagatgagaattccttcacattgcaaaacggatggacatttccaagaagaata |
217 |
Q |
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| T |
55103635 |
tgataaggaccgagttggttctgtgacaacagagatactattggaaaaagatgagaattccttcacattgcaaaacggatggacatttccaagaagaata |
55103734 |
T |
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| Q |
218 |
tatttcaacggtgaaaactgtgacatgcctttacctgacacattccctatg |
268 |
Q |
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| T |
55103735 |
tatttcaacggtgaaaactgtgacatgcctttacctgacacattccctatg |
55103785 |
T |
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